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Search of human proteins with 24211015
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo
sapiens]
(131 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo sapiens] 276 3e-75
gi|153251811 hypothetical protein LOC55199 isoform 3 [Homo sapiens] 262 6e-71
gi|153251796 hypothetical protein LOC55199 isoform 1 [Homo sapiens] 259 4e-70
gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens] 100 4e-22
gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens] 100 4e-22
gi|212549593 hypothetical protein LOC653333 [Homo sapiens] 99 9e-22
gi|134133220 hypothetical protein LOC85002 [Homo sapiens] 99 9e-22
gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo sap... 95 2e-20
gi|239758137 PREDICTED: hypothetical protein [Homo sapiens] 56 7e-09
gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatas... 56 9e-09
gi|169167316 PREDICTED: similar to ectonucleotide pyrophosphatas... 56 9e-09
gi|61743978 stabilin 1 precursor [Homo sapiens] 31 0.24
gi|6912650 semaphorin 3E [Homo sapiens] 31 0.32
gi|21717816 solute carrier family 15, member 4 [Homo sapiens] 30 0.54
gi|5454048 semaphorin 3C [Homo sapiens] 30 0.54
gi|239751247 PREDICTED: similar to mitogen-activated protein kin... 29 0.92
gi|60593040 keratin associated protein 5-10 [Homo sapiens] 29 1.2
gi|5174673 semaphorin 3A precursor [Homo sapiens] 28 1.6
gi|20357568 aminoadipate-semialdehyde dehydrogenase-phosphopante... 28 1.6
gi|209364594 acyl-Coenzyme A binding domain containing 4 isoform... 28 1.6
gi|209364589 acyl-Coenzyme A binding domain containing 4 isoform... 28 1.6
gi|170932550 FLT3-interacting zinc finger 1 [Homo sapiens] 28 1.6
gi|60593038 keratin associated protein 5-4 [Homo sapiens] 28 2.1
gi|9910362 semaphorin sem2 [Homo sapiens] 27 3.5
gi|157671931 solute carrier family 5 (sodium/glucose cotransport... 27 3.5
gi|4503493 early growth response 1 [Homo sapiens] 27 4.6
gi|41406086 semaphorin 3D [Homo sapiens] 27 4.6
gi|12751477 forkhead box L2 [Homo sapiens] 27 6.0
gi|57242774 hypothetical protein LOC9703 [Homo sapiens] 27 6.0
gi|92110053 CUB and Sushi multiple domains 2 [Homo sapiens] 26 7.8
>gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo sapiens]
Length = 131
Score = 276 bits (707), Expect = 3e-75
Identities = 131/131 (100%), Positives = 131/131 (100%)
Query: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKTCCIAQK 60
MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKTCCIAQK
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKTCCIAQK 60
Query: 61 PSCRWSGSCGGWLPAGSTSGLLNSTWPLPSATQRCASCSPPSYAGLGSDGKRKLIMTRNC 120
PSCRWSGSCGGWLPAGSTSGLLNSTWPLPSATQRCASCSPPSYAGLGSDGKRKLIMTRNC
Sbjct: 61 PSCRWSGSCGGWLPAGSTSGLLNSTWPLPSATQRCASCSPPSYAGLGSDGKRKLIMTRNC 120
Query: 121 FPTESTWRWQS 131
FPTESTWRWQS
Sbjct: 121 FPTESTWRWQS 131
>gi|153251811 hypothetical protein LOC55199 isoform 3 [Homo sapiens]
Length = 158
Score = 262 bits (669), Expect = 6e-71
Identities = 131/158 (82%), Positives = 131/158 (82%), Gaps = 27/158 (17%)
Query: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKT------ 54
MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKT
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKTVKHPVC 60
Query: 55 ---------------------CCIAQKPSCRWSGSCGGWLPAGSTSGLLNSTWPLPSATQ 93
CCIAQKPSCRWSGSCGGWLPAGSTSGLLNSTWPLPSATQ
Sbjct: 61 VKHPPSVKYARCFLSELIKKTCCIAQKPSCRWSGSCGGWLPAGSTSGLLNSTWPLPSATQ 120
Query: 94 RCASCSPPSYAGLGSDGKRKLIMTRNCFPTESTWRWQS 131
RCASCSPPSYAGLGSDGKRKLIMTRNCFPTESTWRWQS
Sbjct: 121 RCASCSPPSYAGLGSDGKRKLIMTRNCFPTESTWRWQS 158
>gi|153251796 hypothetical protein LOC55199 isoform 1 [Homo sapiens]
Length = 165
Score = 259 bits (662), Expect = 4e-70
Identities = 131/165 (79%), Positives = 131/165 (79%), Gaps = 34/165 (20%)
Query: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQK------- 53
MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQK
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKHEAVHTE 60
Query: 54 ---------------------------TCCIAQKPSCRWSGSCGGWLPAGSTSGLLNSTW 86
TCCIAQKPSCRWSGSCGGWLPAGSTSGLLNSTW
Sbjct: 61 PLDELYEVLVETLMAKESTQGHRSYLLTCCIAQKPSCRWSGSCGGWLPAGSTSGLLNSTW 120
Query: 87 PLPSATQRCASCSPPSYAGLGSDGKRKLIMTRNCFPTESTWRWQS 131
PLPSATQRCASCSPPSYAGLGSDGKRKLIMTRNCFPTESTWRWQS
Sbjct: 121 PLPSATQRCASCSPPSYAGLGSDGKRKLIMTRNCFPTESTWRWQS 165
>gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo
sapiens]
Length = 296
Score = 100 bits (248), Expect = 4e-22
Identities = 52/70 (74%), Positives = 58/70 (82%), Gaps = 4/70 (5%)
Query: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKT----CC 56
MAPEENAG+ELLLQSF+RRFLAAR LRSF WQSLEAKLRDSSDSELLRDIL KT C
Sbjct: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
Query: 57 IAQKPSCRWS 66
+ PS +++
Sbjct: 61 VKHPPSVKYA 70
>gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo
sapiens]
Length = 330
Score = 100 bits (248), Expect = 4e-22
Identities = 52/70 (74%), Positives = 58/70 (82%), Gaps = 4/70 (5%)
Query: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKT----CC 56
MAPEENAG+ELLLQSF+RRFLAAR LRSF WQSLEAKLRDSSDSELLRDIL KT C
Sbjct: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
Query: 57 IAQKPSCRWS 66
+ PS +++
Sbjct: 61 VKHPPSVKYA 70
>gi|212549593 hypothetical protein LOC653333 [Homo sapiens]
Length = 330
Score = 99.0 bits (245), Expect = 9e-22
Identities = 51/70 (72%), Positives = 57/70 (81%), Gaps = 4/70 (5%)
Query: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKT----CC 56
MAPEENAG+ELLLQ F+RRFLA R LRSF WQSLEAKLRDSSDSELLRDILQKT C
Sbjct: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 57 IAQKPSCRWS 66
+ PS +++
Sbjct: 61 VKHPPSVKYA 70
>gi|134133220 hypothetical protein LOC85002 [Homo sapiens]
Length = 296
Score = 99.0 bits (245), Expect = 9e-22
Identities = 51/70 (72%), Positives = 57/70 (81%), Gaps = 4/70 (5%)
Query: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKT----CC 56
MAPEENAG+ELLLQ F+RRFLA R LRSF WQSLEAKLRDSSDSELLRDILQKT C
Sbjct: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 57 IAQKPSCRWS 66
+ PS +++
Sbjct: 61 VKHPPSVKYA 70
>gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo
sapiens]
Length = 329
Score = 94.7 bits (234), Expect = 2e-20
Identities = 49/70 (70%), Positives = 56/70 (80%), Gaps = 4/70 (5%)
Query: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKT----CC 56
M PEENAG++LLLQSF+ RFL AR LRSF WQSLEAKLRDSSDSELLRDILQKT C
Sbjct: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 57 IAQKPSCRWS 66
+ PS +++
Sbjct: 61 VKPPPSVKYA 70
>gi|239758137 PREDICTED: hypothetical protein [Homo sapiens]
Length = 89
Score = 56.2 bits (134), Expect = 7e-09
Identities = 26/32 (81%), Positives = 28/32 (87%)
Query: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQ 32
MAPEENAG+ELLLQ F+RRFLA R LRSF WQ
Sbjct: 25 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQ 56
>gi|169217659 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 55.8 bits (133), Expect = 9e-09
Identities = 26/32 (81%), Positives = 29/32 (90%)
Query: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQ 32
MAPEENAG+EL LQ F+RRFLAAR+LRSF WQ
Sbjct: 416 MAPEENAGTELWLQGFERRFLAARSLRSFPWQ 447
>gi|169167316 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 55.8 bits (133), Expect = 9e-09
Identities = 26/32 (81%), Positives = 29/32 (90%)
Query: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQ 32
MAPEENAG+EL LQ F+RRFLAAR+LRSF WQ
Sbjct: 416 MAPEENAGTELWLQGFERRFLAARSLRSFPWQ 447
>gi|61743978 stabilin 1 precursor [Homo sapiens]
Length = 2570
Score = 31.2 bits (69), Expect = 0.24
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 52 QKTCCIAQKPSCRWSGSCGGWLPAGSTSGLLNSTWPLPSATQRCASCSPPSYA 104
Q T C A+ PSCR G+ GS N WP P + S SP A
Sbjct: 206 QNTQCSAEAPSCR---CLPGYTQQGSECRAPNPCWPSPCSLLAQCSVSPKGQA 255
>gi|6912650 semaphorin 3E [Homo sapiens]
Length = 775
Score = 30.8 bits (68), Expect = 0.32
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Query: 55 CCIAQKPSCRWSG-SCGGWLPAGS 77
CC+A+ P C W G SC + P G+
Sbjct: 529 CCLARDPYCAWDGISCSRYYPTGT 552
>gi|21717816 solute carrier family 15, member 4 [Homo sapiens]
Length = 577
Score = 30.0 bits (66), Expect = 0.54
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 81 LLNSTWPLPSATQRCASCSPPSYAGL 106
LLN T P P A RC CSP ++AGL
Sbjct: 138 LLNCTAPGPDAAARC--CSPATFAGL 161
>gi|5454048 semaphorin 3C [Homo sapiens]
Length = 751
Score = 30.0 bits (66), Expect = 0.54
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 55 CCIAQKPSCRWSG-SCGGWLPAG 76
CC+A+ P C W G SC + P G
Sbjct: 524 CCLARDPYCAWDGHSCSRFYPTG 546
>gi|239751247 PREDICTED: similar to mitogen-activated protein kinase
kinase 3 [Homo sapiens]
Length = 198
Score = 29.3 bits (64), Expect = 0.92
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 42 SDSELLRDILQKTCCIAQKPSCRWSGSCGGW 72
SD L +QK CC + + RW G GGW
Sbjct: 141 SDVWSLGITMQKVCCRWRPGTLRWGGRKGGW 171
>gi|60593040 keratin associated protein 5-10 [Homo sapiens]
Length = 202
Score = 28.9 bits (63), Expect = 1.2
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 55 CCIAQKPSCRWSGSCGGWL-PAGSTSGLLNSTWPLPSATQRCASCSPPSYAGLGSDGKRK 113
CC SC GSCGG GS G + C SC S G GS G K
Sbjct: 53 CCCVPACSCSSCGSCGGSKGDCGSCGGSKGGCGSCGGSKGGCGSCG-GSKGGCGSCGGSK 111
>gi|5174673 semaphorin 3A precursor [Homo sapiens]
Length = 771
Score = 28.5 bits (62), Expect = 1.6
Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Query: 55 CCIAQKPSCRWSGS-CGGWLP 74
CC+A+ P C W GS C + P
Sbjct: 527 CCLARDPYCAWDGSACSRYFP 547
>gi|20357568 aminoadipate-semialdehyde
dehydrogenase-phosphopantetheinyl transferase [Homo
sapiens]
Length = 309
Score = 28.5 bits (62), Expect = 1.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 52 QKTCCIAQKPSCRWSGSCGGWLPA 75
++ C + RW+ SCG WLP+
Sbjct: 6 KRFCLVPSMEGVRWAFSCGTWLPS 29
>gi|209364594 acyl-Coenzyme A binding domain containing 4 isoform 1
[Homo sapiens]
Length = 341
Score = 28.5 bits (62), Expect = 1.6
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 53 KTCCIAQKPSCRWSGSCGGWLPAGSTSGLLNSTWPLPSATQRC--ASCSPPSYAG 105
+ C + CR +C G L G + G + PL S RC +SC P S +G
Sbjct: 254 RRACRRCRRGCRAWRACPGPLSRGRSPGPVLGHGPLGSRGPRCSSSSCGPSSSSG 308
>gi|209364589 acyl-Coenzyme A binding domain containing 4 isoform 1
[Homo sapiens]
Length = 341
Score = 28.5 bits (62), Expect = 1.6
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 53 KTCCIAQKPSCRWSGSCGGWLPAGSTSGLLNSTWPLPSATQRC--ASCSPPSYAG 105
+ C + CR +C G L G + G + PL S RC +SC P S +G
Sbjct: 254 RRACRRCRRGCRAWRACPGPLSRGRSPGPVLGHGPLGSRGPRCSSSSCGPSSSSG 308
>gi|170932550 FLT3-interacting zinc finger 1 [Homo sapiens]
Length = 496
Score = 28.5 bits (62), Expect = 1.6
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 55 CCIAQKPSCRWSGSCGGWLPAGSTSGLLNSTWPLPSATQRCASCSPPSYAG 105
C + C SG+ GG P G+ +GL +W L A A+ PP G
Sbjct: 155 CNVGPCSVCGGSGAGGGEGPEGAGAGL--GSWGLAEAAAAAAASLPPFACG 203
>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
Length = 288
Score = 28.1 bits (61), Expect = 2.1
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 55 CCIAQKPSCRWSGSCGGWLPA-GSTSGLLNSTWPLPSATQRCASCSPPSYAGLGSDGKRK 113
CC SC GSCGG GS G + C SC S G GS G K
Sbjct: 60 CCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGSKGGCGSCG-GSKGGCGSCGGSK 118
>gi|9910362 semaphorin sem2 [Homo sapiens]
Length = 782
Score = 27.3 bits (59), Expect = 3.5
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 55 CCIAQKPSCRWSG-SCGGWLPA 75
CC+A+ P C W G SC + P+
Sbjct: 532 CCLARDPYCAWDGASCTHYRPS 553
>gi|157671931 solute carrier family 5 (sodium/glucose
cotransporter), member 12 [Homo sapiens]
Length = 618
Score = 27.3 bits (59), Expect = 3.5
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 11/46 (23%)
Query: 61 PSCRWSGSCGG---------WLPAGST--SGLLNSTWPLPSATQRC 95
P W G+ GG W+ G+ + TWPLP +T +C
Sbjct: 431 PFVNWKGALGGLLTGITLSFWVAIGAFIYPAPASKTWPLPLSTDQC 476
>gi|4503493 early growth response 1 [Homo sapiens]
Length = 543
Score = 26.9 bits (58), Expect = 4.6
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 83 NSTWPLPSATQRCASCSPPSYAGLGSDGKRKLIMTRNCFPTEST 126
+S+ P P+A+ AS SPP + S+ + FPT +T
Sbjct: 171 SSSAPSPAASSASASQSPPLSCAVPSNDSSPIYSAAPTFPTPNT 214
>gi|41406086 semaphorin 3D [Homo sapiens]
Length = 777
Score = 26.9 bits (58), Expect = 4.6
Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Query: 55 CCIAQKPSCRWSG-SCGGWLP 74
CC+A+ P C W G +C + P
Sbjct: 544 CCLARDPYCAWDGNACSRYAP 564
>gi|12751477 forkhead box L2 [Homo sapiens]
Length = 376
Score = 26.6 bits (57), Expect = 6.0
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 23/73 (31%)
Query: 66 SGSCG---------GWL--PAGSTSGLLNSTWPLPS------------ATQRCASCSPPS 102
+G CG G+L P SG LN++WPLP A A+ + +
Sbjct: 173 AGGCGVAGAGADGYGYLAPPKYLQSGFLNNSWPLPQPPSPMPYASCQMAAAAAAAAAAAA 232
Query: 103 YAGLGSDGKRKLI 115
AG GS G ++
Sbjct: 233 AAGPGSPGAAAVV 245
>gi|57242774 hypothetical protein LOC9703 [Homo sapiens]
Length = 2235
Score = 26.6 bits (57), Expect = 6.0
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 3 PEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQK 53
PEE S L LQ R+ +A + S+ L+D S +E L D+ QK
Sbjct: 1807 PEEQRSSILHLQEAVRQHVAQIRQLEKQMYSIMKSLQDDSKNENLLDLNQK 1857
>gi|92110053 CUB and Sushi multiple domains 2 [Homo sapiens]
Length = 3487
Score = 26.2 bits (56), Expect = 7.8
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 61 PSCRWSGSCGGWLPAGSTSGLLNSTWPLPSATQRCASCSPPSYAGLG 107
PSCR +CGG L SG+++S PS A C+ A LG
Sbjct: 194 PSCRADDACGGTL--RGQSGIISSP-HFPSEYHNNADCTWTILAELG 237
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.129 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,587,903
Number of Sequences: 37866
Number of extensions: 246145
Number of successful extensions: 774
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 756
Number of HSP's gapped (non-prelim): 31
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.