Guide to the Human Genome
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Name: KIAA0100 Sequence: fasta or formatted (2235aa) NCBI GI: 57242774
Description:

hypothetical protein LOC9703

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4        120           2
 C cysteine            2.0         45           2
 D aspartate           5.0        112           2
 E glutamate           6.2        139           4
 F phenylalanine       3.7         83           3
 G glycine             4.8        107           2
 H histidine           3.3         74           2
 I isoleucine          4.2         94           2
 K lysine              5.2        117           3
 L leucine            13.6        303           3
 M methionine          2.0         45           2
 N asparagine          3.3         73           2
 P proline             5.0        111           2
 Q glutamine           6.4        143           3
 R arginine            5.5        122           3
 S serine              8.5        191           3
 T threonine           5.3        119           4
 V valine              6.6        148           2
 W tryptophan          2.0         45           2
 Y tyrosine            2.0         44           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC9703 
SWAP70                0.005   SWAP-70 protein 
CCDC11                0.004   coiled-coil domain containing 11 
HOOK1                 0.004   hook homolog 1 
CCDC46                0.004   coiled-coil domain containing 46 isoform a 
CCDC18                0.004   sarcoma antigen NY-SAR-41 
EEA1                  0.004   early endosome antigen 1, 162kD 
CEP164                0.004   centrosomal protein 164kDa 
KTN1                  0.004   kinectin 1 isoform a 
KTN1                  0.004   kinectin 1 isoform c 
KTN1                  0.004   kinectin 1 isoform a 
SEPT7                 0.004   cell division cycle 10 isoform 1 
SEPT7                 0.004   cell division cycle 10 isoform 2 
ANKRD26               0.004   ankyrin repeat domain 26 
AKAP9                 0.004   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.004   A-kinase anchor protein 9 isoform 3 
FILIP1L               0.004   filamin A interacting protein 1-like isoform 3 [Hom...
FILIP1L               0.004   filamin A interacting protein 1-like isoform 1 [Hom...
KIF21A                0.004   kinesin family member 21A 
SLMAP                 0.004   sarcolemma associated protein 
KTN1                  0.003   kinectin 1 isoform b 
TPR                   0.003   nuclear pore complex-associated protein TPR 
CENPE                 0.003   centromere protein E 
C10orf118             0.003   CTCL tumor antigen L14-2 
KIF21B                0.003   kinesin family member 21B 
ZNF853                0.003   zinc finger protein 853 
EPS15                 0.003   epidermal growth factor receptor pathway substrate ...
EPS15                 0.003   epidermal growth factor receptor pathway substrate 15...
MACF1                 0.003   microfilament and actin filament cross-linker protei...
KIF20B                0.003   M-phase phosphoprotein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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