Guide to the Human Genome
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Name: SEMA3G Sequence: fasta or formatted (782aa) NCBI GI: 9910362
Description:

semaphorin sem2

Referenced in:

Semaphorins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         58           2
 C cysteine            2.9         23           2
 D aspartate           4.7         37           1
 E glutamate           6.1         48           3
 F phenylalanine       4.3         34           3
 G glycine             9.1         71           2
 H histidine           3.2         25           1
 I isoleucine          2.0         16           1
 K lysine              3.1         24           2
 L leucine            10.1         79           3
 M methionine          1.4         11           1
 N asparagine          1.9         15           1
 P proline             7.8         61           2
 Q glutamine           4.5         35           2
 R arginine            8.2         64           2
 S serine              6.3         49           2
 T threonine           4.9         38           2
 V valine              7.8         61           2
 W tryptophan          1.8         14           1
 Y tyrosine            2.4         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   semaphorin sem2 
SEMA3E                0.465   semaphorin 3E 
SEMA3A                0.420   semaphorin 3A precursor 
SEMA3B                0.397   semaphorin 3B isoform 1 precursor 
SEMA3B                0.396   semaphorin 3B isoform 2 precursor 
SEMA3D                0.392   semaphorin 3D 
SEMA3F                0.373   semaphorin 3F 
SEMA3C                0.349   semaphorin 3C 
SEMA4C                0.183   semaphorin 4C 
SEMA4G                0.181   semaphorin 4G 
SEMA4B                0.180   semaphorin 4B precursor 
SEMA4B                0.180   semaphorin 4B precursor 
SEMA4D                0.177   semaphorin 4D isoform 1 
SEMA4D                0.170   semaphorin 4D isoform 2 
SEMA4F                0.157   semaphorin W 
SEMA4A                0.148   semaphorin B 
SEMA6D                0.145   semaphorin 6D isoform 5 precursor 
SEMA6D                0.143   semaphorin 6D isoform 3 precursor 
SEMA6D                0.142   semaphorin 6D isoform 4 precursor 
SEMA6D                0.142   semaphorin 6D isoform 2 precursor 
SEMA6A                0.141   sema domain, transmembrane domain (TM), and cytoplas...
SEMA6D                0.140   semaphorin 6D isoform 1 precursor 
SEMA6B                0.138   semaphorin 6B precursor 
SEMA6C                0.129   semaphorin Y 
SEMA6D                0.122   semaphorin 6D isoform 6 precursor 
SEMA5B                0.114   semaphorin 5B isoform 1 
SEMA5A                0.104   semaphorin 5A 
SEMA7A                0.099   semaphorin 7A isoform 2 preproprotein 
SEMA7A                0.097   semaphorin 7A isoform 1 preproprotein 
SEMA7A                0.090   semaphorin 7A isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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