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Search of human proteins with 239835767
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239835767 developmental pluripotency associated 2 [Homo
sapiens]
(298 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239835767 developmental pluripotency associated 2 [Homo sapiens] 605 e-173
gi|144953903 developmental pluripotency associated 4 [Homo sapiens] 202 2e-52
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 39 0.007
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens] 37 0.021
gi|108389176 tRNA splicing endonuclease 54 homolog [Homo sapiens] 37 0.021
gi|157074225 nuclear pore complex interacting protein-like 3 [Ho... 37 0.021
gi|239745482 PREDICTED: hypothetical protein [Homo sapiens] 37 0.027
gi|239745494 PREDICTED: similar to NPIP-like protein ENSP0000034... 33 0.23
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 33 0.40
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 33 0.40
gi|13540600 nudE nuclear distribution gene E homolog (A. nidulan... 32 0.52
gi|71284108 nudE nuclear distribution gene E homolog (A. nidulan... 32 0.52
gi|4505959 POU domain, class 2, transcription factor 2 [Homo sap... 32 0.68
gi|239745607 PREDICTED: nuclear pore complex interacting protein... 31 1.5
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit... 31 1.5
gi|221316642 nuclear distribution gene E homolog 1 [Homo sapiens] 30 2.0
gi|8923110 nuclear distribution gene E homolog 1 [Homo sapiens] 30 2.0
gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens] 30 2.0
gi|50582989 IQ motif and Sec7 domain 1 isoform b [Homo sapiens] 30 2.0
gi|110349719 titin isoform N2-A [Homo sapiens] 30 2.6
gi|110349717 titin isoform novex-2 [Homo sapiens] 30 2.6
gi|110349713 titin isoform novex-1 [Homo sapiens] 30 2.6
gi|110349715 titin isoform N2-B [Homo sapiens] 30 2.6
gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo sapi... 30 2.6
gi|169234723 lin-54 homolog isoform b [Homo sapiens] 30 2.6
gi|169234721 lin-54 homolog isoform b [Homo sapiens] 30 2.6
gi|169234719 lin-54 homolog isoform a [Homo sapiens] 30 2.6
gi|121114287 apoptosis-stimulating protein of p53, 1 [Homo sapiens] 29 4.4
gi|27734911 DAZ interacting protein 1-like [Homo sapiens] 29 4.4
gi|118498362 kinectin 1 isoform b [Homo sapiens] 29 5.7
>gi|239835767 developmental pluripotency associated 2 [Homo sapiens]
Length = 298
Score = 605 bits (1559), Expect = e-173
Identities = 298/298 (100%), Positives = 298/298 (100%)
Query: 1 MSDANLDSSKKNFLEGEVDDEESVILTLVPVKDDANMEQMEPSVSSTSDVKLEKPKKYNP 60
MSDANLDSSKKNFLEGEVDDEESVILTLVPVKDDANMEQMEPSVSSTSDVKLEKPKKYNP
Sbjct: 1 MSDANLDSSKKNFLEGEVDDEESVILTLVPVKDDANMEQMEPSVSSTSDVKLEKPKKYNP 60
Query: 61 GHLLQTNEQFTAPQKARCKIPALPLPTILPPINKVCRDTLRDWCQQLGLSTNGKKIEVYL 120
GHLLQTNEQFTAPQKARCKIPALPLPTILPPINKVCRDTLRDWCQQLGLSTNGKKIEVYL
Sbjct: 61 GHLLQTNEQFTAPQKARCKIPALPLPTILPPINKVCRDTLRDWCQQLGLSTNGKKIEVYL 120
Query: 121 RLHRHAYPEQRQDMPEMSQETRLQRCSRKRKAVTKRARLQRSYEMNERAEETNTVEVITS 180
RLHRHAYPEQRQDMPEMSQETRLQRCSRKRKAVTKRARLQRSYEMNERAEETNTVEVITS
Sbjct: 121 RLHRHAYPEQRQDMPEMSQETRLQRCSRKRKAVTKRARLQRSYEMNERAEETNTVEVITS 180
Query: 181 APGAMLASWARIAARAVQPKALNSCSIPVSVEAFLMQASGVRWCVVHGRLLSADTKGWVR 240
APGAMLASWARIAARAVQPKALNSCSIPVSVEAFLMQASGVRWCVVHGRLLSADTKGWVR
Sbjct: 181 APGAMLASWARIAARAVQPKALNSCSIPVSVEAFLMQASGVRWCVVHGRLLSADTKGWVR 240
Query: 241 LQFHAGQAWVPTTHRRMISLFLLPACIFPSPGIEDNMLCPDCAKRNKKMMKRLMTVEK 298
LQFHAGQAWVPTTHRRMISLFLLPACIFPSPGIEDNMLCPDCAKRNKKMMKRLMTVEK
Sbjct: 241 LQFHAGQAWVPTTHRRMISLFLLPACIFPSPGIEDNMLCPDCAKRNKKMMKRLMTVEK 298
>gi|144953903 developmental pluripotency associated 4 [Homo sapiens]
Length = 304
Score = 202 bits (515), Expect = 2e-52
Identities = 118/241 (48%), Positives = 146/241 (60%), Gaps = 34/241 (14%)
Query: 73 PQKARCKIPALPLPTILPPINKVCRDTLRDWCQQLGLSTNGKKIEVYLRLHRHAYPEQRQ 132
PQK KIP PLP+ LPP+N + RD LR WCQQL LS+ G+K++ Y RL AYP Q+
Sbjct: 75 PQK---KIPIPPLPSKLPPVNLIHRDILRAWCQQLKLSSKGQKLDAYKRLCAFAYPNQK- 130
Query: 133 DMPEMSQETRLQRCSRKRKAVTKRARLQRSYEM-----------------NERA--EETN 173
D P ++E ++++ +K+ V K +S E N A E N
Sbjct: 131 DFPSTAKEAKIRKSLQKKLKVEKGETSLQSSETHPPEVALPPVGEPPALENSTALLEGVN 190
Query: 174 TVEVITSAPGAMLASWARIAARAVQPKALNSCSIPVSVEAFLMQASGVRWCVVHGRLLSA 233
TV V TSAP A+LASWARI+ARA P+A+ S +ASGVRWCVVHG+ L A
Sbjct: 191 TVVVTTSAPEALLASWARISARARTPEAVESPQ----------EASGVRWCVVHGKSLPA 240
Query: 234 DTKGWVRLQFHAGQAWVPTTHR-RMISLFLLPACIFPSPGIEDNMLCPDCAKRNKKMMKR 292
DT GWV LQFHAGQAWVP R+ +LFLLPA FP P +EDNMLCP C RNK ++K
Sbjct: 241 DTDGWVHLQFHAGQAWVPEKQEGRVSALFLLPASNFPPPHLEDNMLCPKCVHRNKVLIKS 300
Query: 293 L 293
L
Sbjct: 301 L 301
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 38.5 bits (88), Expect = 0.007
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 110 STNGKKIEV--YLRLHRHAYPEQRQDMPEMSQETRLQRCSR---KRKAVTKRARLQRSYE 164
S G KI + + L RH + R + + T++ R + KRK K+ QR+ E
Sbjct: 131 SFRGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQE 190
Query: 165 MNERAEETNTVEVITSAPGAMLASWARIAA 194
+ RAE+ + ++ SA A L +W R+AA
Sbjct: 191 LRRRAEDYHKCKIPPSARKA-LCNWVRMAA 219
>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
Length = 1133
Score = 37.0 bits (84), Expect = 0.021
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 110 STNGKKIEV--YLRLHRHAYPEQRQDMPEMSQETRLQ---RCSRKRKAVTKRARLQRSYE 164
S G KI + + L RH + R + + T++ + + KRK K+ QR+ E
Sbjct: 131 SFRGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINHHDKINGKRKTARKQKMFQRAQE 190
Query: 165 MNERAEETNTVEVITSAPGAMLASWARIAA 194
+ RAE+ + ++ SA A L +W R+AA
Sbjct: 191 LRRRAEDYHKCKIPPSARKA-LCNWVRMAA 219
>gi|108389176 tRNA splicing endonuclease 54 homolog [Homo sapiens]
Length = 526
Score = 37.0 bits (84), Expect = 0.021
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 68 EQFTAPQKA---RCKIPALPLPTILPPINKVCRDT-LRDWCQQLGLSTNGKKIEVYLRLH 123
EQ + P A R + P P +LP N R+T WCQ+L ++ E R
Sbjct: 299 EQISFPNMASDSRHTLLRAPAPELLPA-NVAGRETDAESWCQKLN-----QRKEKLSRRE 352
Query: 124 RHAYPEQRQDMPEMSQETRLQRCS--RKRKAVTKRARLQRS 162
R + E Q +++ + +QRCS R+ K + +R ++QRS
Sbjct: 353 REHHAEAAQFQEDVNADPEVQRCSSWREYKELLQRRQVQRS 393
>gi|157074225 nuclear pore complex interacting protein-like 3 [Homo
sapiens]
Length = 678
Score = 37.0 bits (84), Expect = 0.021
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 110 STNGKKIEV--YLRLHRHAYPEQRQDMPEMSQETRLQ---RCSRKRKAVTKRARLQRSYE 164
S G KI + + L RH + R + + T++ + + KRK K+ QR+ E
Sbjct: 131 SFRGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINHHDKINGKRKTARKQKMFQRAQE 190
Query: 165 MNERAEETNTVEVITSAPGAMLASWARIAA 194
+ RAE+ + ++ SA A L +W R+AA
Sbjct: 191 LRRRAEDYHKCKIPPSARKA-LCNWVRMAA 219
>gi|239745482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 36.6 bits (83), Expect = 0.027
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 110 STNGKKIEV--YLRLHRHAYPEQRQDMPEMSQETRLQRCSR---KRKAVTKRARLQRSYE 164
S G KI + + L RH + R + + T++ R + KRK K+ QR+ E
Sbjct: 166 SFRGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQE 225
Query: 165 MNERAEETNTVEVITSAPGAMLASWARIAA 194
+ RAE+ + ++ SA L +W R+AA
Sbjct: 226 LRRRAEDYHKCKIPPSA-RKPLCNWVRMAA 254
>gi|239745494 PREDICTED: similar to NPIP-like protein
ENSP00000346774 [Homo sapiens]
Length = 221
Score = 33.5 bits (75), Expect = 0.23
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 110 STNGKKIEV--YLRLHRHAYPEQRQDMPEMSQETRLQRCSR---KRKAVTKRARLQRSYE 164
S G KI + + L RH + R + + T++ R + KRK K+ QR+ E
Sbjct: 70 SFRGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQE 129
Query: 165 MNERAEETNTVEVITSAPGAMLASWARI 192
+ RAE+ + ++ SA A L +W +
Sbjct: 130 LRRRAEDYHKCKIPPSARKA-LCNWVSL 156
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 32.7 bits (73), Expect = 0.40
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 25/187 (13%)
Query: 6 LDSSKKNFLEGEVDDEESVILTLVPVKDDANMEQMEP---------SVSSTSDVKLEKP- 55
L++S+K+ V++ ++ L ++P +DDA + EP SVS + +KP
Sbjct: 920 LETSRKSREPTGVEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKRERDKPK 979
Query: 56 ------KKYNPGHLLQTNEQFTAPQKA---RCKIPALPLPTILPPINKVCRDTLRDWCQQ 106
K+ N G + E P K + P PPI K +T +
Sbjct: 980 AKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAKEETPK--TDN 1037
Query: 107 LGLSTNGKKIEVYLRLHRHAYPEQRQDMPEMSQETRLQRCSRKRKAVTKRARLQRSYEMN 166
S++ +K E R A+ + ++ QET+ + + +K +K + ++
Sbjct: 1038 TKSSSSSQKDEKITGTPRKAHSKSAKE----HQETKPVKEEKVKKDYSKDVKSEKLTTKE 1093
Query: 167 ERAEETN 173
E+A++ N
Sbjct: 1094 EKAKKPN 1100
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 32.7 bits (73), Expect = 0.40
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 25/187 (13%)
Query: 6 LDSSKKNFLEGEVDDEESVILTLVPVKDDANMEQMEP---------SVSSTSDVKLEKP- 55
L++S+K+ V++ ++ L ++P +DDA + EP SVS + +KP
Sbjct: 954 LETSRKSREPTGVEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKRERDKPK 1013
Query: 56 ------KKYNPGHLLQTNEQFTAPQKA---RCKIPALPLPTILPPINKVCRDTLRDWCQQ 106
K+ N G + E P K + P PPI K +T +
Sbjct: 1014 AKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAKEETPK--TDN 1071
Query: 107 LGLSTNGKKIEVYLRLHRHAYPEQRQDMPEMSQETRLQRCSRKRKAVTKRARLQRSYEMN 166
S++ +K E R A+ + ++ QET+ + + +K +K + ++
Sbjct: 1072 TKSSSSSQKDEKITGTPRKAHSKSAKE----HQETKPVKEEKVKKDYSKDVKSEKLTTKE 1127
Query: 167 ERAEETN 173
E+A++ N
Sbjct: 1128 EKAKKPN 1134
>gi|13540600 nudE nuclear distribution gene E homolog (A.
nidulans)-like 1 isoform B [Homo sapiens]
Length = 345
Score = 32.3 bits (72), Expect = 0.52
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 13 FLEGEVDDEESVILTLVPVKDDANMEQMEPSVSSTSDVKLEKPKKYNPGHLLQTNEQFTA 72
FLE E+D++ES+++++ +KD+A + E +V E +K P E+ +
Sbjct: 152 FLESELDEKESLLVSVQRLKDEARDLRQELAVRERQQ---EVTRKSAPSSPTLDCEKMDS 208
Query: 73 PQKARCKIPALPL 85
+A +PA P+
Sbjct: 209 AVQASLSLPATPV 221
>gi|71284108 nudE nuclear distribution gene E homolog (A.
nidulans)-like 1 isoform A [Homo sapiens]
Length = 328
Score = 32.3 bits (72), Expect = 0.52
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 13 FLEGEVDDEESVILTLVPVKDDANMEQMEPSVSSTSDVKLEKPKKYNPGHLLQTNEQFTA 72
FLE E+D++ES+++++ +KD+A + E +V E +K P E+ +
Sbjct: 152 FLESELDEKESLLVSVQRLKDEARDLRQELAVRERQQ---EVTRKSAPSSPTLDCEKMDS 208
Query: 73 PQKARCKIPALPL 85
+A +PA P+
Sbjct: 209 AVQASLSLPATPV 221
>gi|4505959 POU domain, class 2, transcription factor 2 [Homo
sapiens]
Length = 463
Score = 32.0 bits (71), Expect = 0.68
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Query: 60 PGHLLQTNEQFTAPQKARCKIPALPLPTILPPINKVCRDTLRDWCQQLGLSTNGKKIEVY 119
PGH LQ QF PQ + + LP P + + + + L + GL T K
Sbjct: 116 PGHHLQPPAQFLLPQAQQSQPGLLPTPNLF-QLPQQTQGALLTSQPRAGLPTQPPKC--- 171
Query: 120 LRLHRHAYPEQRQDMPEMSQETRLQRCSRKRKAVTK 155
L ++PE+ D+ E+ Q R + R + T+
Sbjct: 172 --LEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQ 205
>gi|239745607 PREDICTED: nuclear pore complex interacting
protein-like 2 [Homo sapiens]
Length = 265
Score = 30.8 bits (68), Expect = 1.5
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 120 LRLHRHAYPEQRQDMPEMSQETRLQRCSR---KRKAVTKRARLQRSYEMNERAEETNTVE 176
+ L RH + R + + T++ R + KRK K+ QR+ E+ RAE+ + +
Sbjct: 126 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK 185
Query: 177 VITSA 181
+ SA
Sbjct: 186 IPPSA 190
>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis critical
region 1 [Homo sapiens]
Length = 1400
Score = 30.8 bits (68), Expect = 1.5
Identities = 19/89 (21%), Positives = 41/89 (46%)
Query: 126 AYPEQRQDMPEMSQETRLQRCSRKRKAVTKRARLQRSYEMNERAEETNTVEVITSAPGAM 185
A P + ++M + + LQ R+ + + + +E + E+ITS+ ++
Sbjct: 939 AEPTEHEEMTPLMVDENLQAPFRQGSCAERPKDICATVASTTGSESSTASEIITSSTMSV 998
Query: 186 LASWARIAARAVQPKALNSCSIPVSVEAF 214
A+ + A+ ++S +IPVS A+
Sbjct: 999 SATASSTASSTASEITMSSAAIPVSSTAY 1027
>gi|221316642 nuclear distribution gene E homolog 1 [Homo sapiens]
Length = 335
Score = 30.4 bits (67), Expect = 2.0
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 13 FLEGEVDDEESVILTLVPVKDDANMEQMEPSVSSTSDVKLEKPKKYNPGHLLQTNEQFTA 72
FLE E+D++E+++ ++ +KD+A + E +V K EKP+ P ++ TA
Sbjct: 151 FLESELDEKENLLESVQRLKDEARDLRQELAVQQ----KQEKPRTPMPSS-VEAERTDTA 205
Query: 73 PQKARCKIPALPL 85
Q A +P+ P+
Sbjct: 206 VQ-ATGSVPSTPI 217
>gi|8923110 nuclear distribution gene E homolog 1 [Homo sapiens]
Length = 335
Score = 30.4 bits (67), Expect = 2.0
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 13 FLEGEVDDEESVILTLVPVKDDANMEQMEPSVSSTSDVKLEKPKKYNPGHLLQTNEQFTA 72
FLE E+D++E+++ ++ +KD+A + E +V K EKP+ P ++ TA
Sbjct: 151 FLESELDEKENLLESVQRLKDEARDLRQELAVQQ----KQEKPRTPMPSS-VEAERTDTA 205
Query: 73 PQKARCKIPALPL 85
Q A +P+ P+
Sbjct: 206 VQ-ATGSVPSTPI 217
>gi|197304786 IQ motif and Sec7 domain 1 isoform a [Homo sapiens]
Length = 1114
Score = 30.4 bits (67), Expect = 2.0
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 129 EQRQDMPEMSQETRLQRCSRKRKAVTKRARLQRSYEMNERAEETNTVEVITSAPGAMLAS 188
+QR P++ T + R + +A+ + L SYE++ ++ VE++ G L +
Sbjct: 62 QQRTRRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQD-KQVEMLERKYGGRLVT 120
Query: 189 WARIAARAVQ 198
R AAR +Q
Sbjct: 121 --RHAARTIQ 128
>gi|50582989 IQ motif and Sec7 domain 1 isoform b [Homo sapiens]
Length = 963
Score = 30.4 bits (67), Expect = 2.0
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 129 EQRQDMPEMSQETRLQRCSRKRKAVTKRARLQRSYEMNERAEETNTVEVITSAPGAMLAS 188
+QR P++ T + R + +A+ + L SYE++ ++ VE++ G L +
Sbjct: 76 QQRTRRPKLQHSTSILRKQAEEEAIKRSRSLSESYELSSDLQD-KQVEMLERKYGGRLVT 134
Query: 189 WARIAARAVQ 198
R AAR +Q
Sbjct: 135 --RHAARTIQ 142
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 30.0 bits (66), Expect = 2.6
Identities = 11/46 (23%), Positives = 30/46 (65%)
Query: 129 EQRQDMPEMSQETRLQRCSRKRKAVTKRARLQRSYEMNERAEETNT 174
E + ++ MS+E + ++ SR+++ VT+ ++ YE+++ A+ ++
Sbjct: 32217 EYKSELDFMSKEEKSRKKSRRQREVTEITEIEEEYEISKHAQRESS 32262
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 30.0 bits (66), Expect = 2.6
Identities = 11/46 (23%), Positives = 30/46 (65%)
Query: 129 EQRQDMPEMSQETRLQRCSRKRKAVTKRARLQRSYEMNERAEETNT 174
E + ++ MS+E + ++ SR+++ VT+ ++ YE+++ A+ ++
Sbjct: 25912 EYKSELDFMSKEEKSRKKSRRQREVTEITEIEEEYEISKHAQRESS 25957
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 30.0 bits (66), Expect = 2.6
Identities = 11/46 (23%), Positives = 30/46 (65%)
Query: 129 EQRQDMPEMSQETRLQRCSRKRKAVTKRARLQRSYEMNERAEETNT 174
E + ++ MS+E + ++ SR+++ VT+ ++ YE+++ A+ ++
Sbjct: 25845 EYKSELDFMSKEEKSRKKSRRQREVTEITEIEEEYEISKHAQRESS 25890
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 30.0 bits (66), Expect = 2.6
Identities = 11/46 (23%), Positives = 30/46 (65%)
Query: 129 EQRQDMPEMSQETRLQRCSRKRKAVTKRARLQRSYEMNERAEETNT 174
E + ++ MS+E + ++ SR+++ VT+ ++ YE+++ A+ ++
Sbjct: 25720 EYKSELDFMSKEEKSRKKSRRQREVTEITEIEEEYEISKHAQRESS 25765
>gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo sapiens]
Length = 1157
Score = 30.0 bits (66), Expect = 2.6
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 178 ITSAPGAMLASWARIAARAVQPKALNSCSIPVSVEAFLMQASGVRWCVVHGRLLSADTKG 237
+ S+PG ML +WAR+ QP+ + V+ +A +A W + + L A+
Sbjct: 1084 LLSSPGTMLKTWARL-----QPRTESLLRALVAEKADCHEALLAAW-KKNPKYLLAEYCE 1137
Query: 238 WVRLQFHAG--QAWVPTT 253
W+ H +AW PTT
Sbjct: 1138 WLPQAMHPDIEKAWPPTT 1155
>gi|169234723 lin-54 homolog isoform b [Homo sapiens]
Length = 528
Score = 30.0 bits (66), Expect = 2.6
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 30 PVKDDANMEQMEPSVSSTSDVKLEKPKKYNPGHLLQTNEQFTAPQKARCKIPALPLPTIL 89
PV + +M + S VK PK NP + T Q PQ+ R +PA PLP I
Sbjct: 171 PVVVNTTPVRMSVPIVSAQAVKQVVPKPINPTSQIVTTSQ---PQQ-RLIMPATPLPQIQ 226
Query: 90 PPINKV 95
P + +
Sbjct: 227 PNLTNL 232
>gi|169234721 lin-54 homolog isoform b [Homo sapiens]
Length = 528
Score = 30.0 bits (66), Expect = 2.6
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 30 PVKDDANMEQMEPSVSSTSDVKLEKPKKYNPGHLLQTNEQFTAPQKARCKIPALPLPTIL 89
PV + +M + S VK PK NP + T Q PQ+ R +PA PLP I
Sbjct: 171 PVVVNTTPVRMSVPIVSAQAVKQVVPKPINPTSQIVTTSQ---PQQ-RLIMPATPLPQIQ 226
Query: 90 PPINKV 95
P + +
Sbjct: 227 PNLTNL 232
>gi|169234719 lin-54 homolog isoform a [Homo sapiens]
Length = 749
Score = 30.0 bits (66), Expect = 2.6
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 30 PVKDDANMEQMEPSVSSTSDVKLEKPKKYNPGHLLQTNEQFTAPQKARCKIPALPLPTIL 89
PV + +M + S VK PK NP + T Q PQ+ R +PA PLP I
Sbjct: 392 PVVVNTTPVRMSVPIVSAQAVKQVVPKPINPTSQIVTTSQ---PQQ-RLIMPATPLPQIQ 447
Query: 90 PPINKV 95
P + +
Sbjct: 448 PNLTNL 453
>gi|121114287 apoptosis-stimulating protein of p53, 1 [Homo sapiens]
Length = 1090
Score = 29.3 bits (64), Expect = 4.4
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 179 TSAPGAMLASWARIAARAVQPKALNSCSIPVSVEAFLMQASGVRWCVVHGRLLSADTKGW 238
TS+P + L++ R+AA + ++ S PV + Q+ + HGR SA+ W
Sbjct: 330 TSSPQSPLSTSGRVAAVGPYIQVPSAGSFPVLGDPIKPQSLSIASNAAHGRSKSANDGNW 389
Query: 239 VRLQFHAGQAWVP 251
L+ ++ + P
Sbjct: 390 PTLKQNSSSSVKP 402
>gi|27734911 DAZ interacting protein 1-like [Homo sapiens]
Length = 767
Score = 29.3 bits (64), Expect = 4.4
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 9/115 (7%)
Query: 86 PTILPPINKVCRDTLRDWCQQLGLSTNGKKIEVYLRLHRHAYPEQRQDMPEMSQETRLQR 145
PT+L + DTL + + +G+ + K I + H + +++ L
Sbjct: 449 PTLLKHFRPILEDTLEEKLESMGIRKDAKGISIQTLRHLESLLRVQREQKARKFSEFLSL 508
Query: 146 CSRKRKAVTKRARLQRSYEMNERAEETNTVEVITSAPGAMLASWARIAARAVQPK 200
+ K VT RA+ ER E V P ++ + + + R QPK
Sbjct: 509 RGKLVKEVTSRAK--------ERQENGAAVSQPDGQP-SVKSQQSALVTREAQPK 554
>gi|118498362 kinectin 1 isoform b [Homo sapiens]
Length = 1306
Score = 28.9 bits (63), Expect = 5.7
Identities = 41/187 (21%), Positives = 75/187 (40%), Gaps = 21/187 (11%)
Query: 8 SSKKNFLEGEV--DDEESV-----ILTLVPVKDDANMEQMEPSVSSTSDVK--LEKPKKY 58
+ KK G + D ESV + + V+DD V ++S V+ +K KK
Sbjct: 62 NKKKEIQNGNLHESDSESVPRDFKLSDALAVEDDQVAPVPLNVVETSSSVRERKKKEKKQ 121
Query: 59 NP---GHLLQTNEQFTAPQKARCKIPALPLPTILPPINKVC-RDTLRDWCQQLGLSTNGK 114
P +++ ++ P K +P PT PP + + G K
Sbjct: 122 KPVLEEQVIKESDASKIPGKKVEPVPVTKQPT--PPSEAAASKKKPGQKKSKNGSDDQDK 179
Query: 115 KIEVYLRLHRHAYPEQRQDMPEMSQETRLQRCSRKRKAVTKRARLQRSYEMNERAEETNT 174
K+E + P +RQ+ + QET+ + S K+KA +K+ + + + T
Sbjct: 180 KVETLM------VPSKRQEALPLHQETKQESGSGKKKASSKKQKTENVFVDEPLIHATTY 233
Query: 175 VEVITSA 181
+ ++ +A
Sbjct: 234 IPLMDNA 240
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.130 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,636,620
Number of Sequences: 37866
Number of extensions: 512662
Number of successful extensions: 1794
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1770
Number of HSP's gapped (non-prelim): 58
length of query: 298
length of database: 18,247,518
effective HSP length: 102
effective length of query: 196
effective length of database: 14,385,186
effective search space: 2819496456
effective search space used: 2819496456
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.