TSEN54 248

Name: TSEN54	Sequence: fasta or formatted (526aa)		NCBI GI: 108389176
Description: tRNA splicing endonuclease 54 homolog		Referenced in: tRNA Enzymes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 42 2 C cysteine 1.7 9 1 D aspartate 4.2 22 1 E glutamate 8.0 42 2 F phenylalanine 3.8 20 1 G glycine 6.8 36 2 H histidine 2.9 15 2 I isoleucine 1.9 10 2 K lysine 4.2 22 2 L leucine 10.8 57 3 M methionine 1.0 5 1 N asparagine 2.1 11 2 P proline 8.4 44 3 Q glutamine 7.2 38 1 R arginine 8.4 44 2 S serine 9.7 51 4 T threonine 2.3 12 2 V valine 5.3 28 2 W tryptophan 1.5 8 1 Y tyrosine 1.9 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tRNA splicing endonuclease 54 homolog MAP7D1 0.018 MAP7 domain containing 1 LOC100293596 0.013 PREDICTED: similar to mucin ZFPM1 0.013 zinc finger protein, multitype 1 LOC730032 0.012 PREDICTED: similar to Rho guanine nucleotide exchan... LARP1 0.011 la related protein isoform 2 DPPA2 0.011 developmental pluripotency associated 2 LOC100130174 0.011 PREDICTED: hypothetical protein LOC100130174 0.011 PREDICTED: hypothetical protein LOC100130174 0.011 PREDICTED: hypothetical protein MED25 0.011 mediator complex subunit 25 LOC100291868 0.010 PREDICTED: hypothetical protein XP_002345322 LOC100290196 0.010 PREDICTED: hypothetical protein XP_002347647 LOC100289429 0.010 PREDICTED: hypothetical protein XP_002342197 BAZ2A 0.010 bromodomain adjacent to zinc finger domain, 2A [Homo... KAT2A 0.010 general control of amino acid synthesis 5-like 2 [H... PCLO 0.010 piccolo isoform 2 PCLO 0.010 piccolo isoform 1 EP300 0.010 E1A binding protein p300 C14orf4 0.010 chromosome 14 open reading frame 4 TNRC6A 0.009 trinucleotide repeat containing 6A MAP3K6 0.009 mitogen-activated protein kinase kinase kinase 6 [Ho... LOC285679 0.009 hypothetical protein LOC285679 RICH2 0.009 Rho GTPase-activating protein RICH2 MAP3K1 0.009 mitogen-activated protein kinase kinase kinase 1 [H... LOC645249 0.009 PREDICTED: hypothetical protein LOC645249 0.009 PREDICTED: hypothetical protein LOC645249 0.009 PREDICTED: hypothetical protein RNASEN 0.009 ribonuclease III, nuclear isoform 2 RNASEN 0.009 ribonuclease III, nuclear isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.