Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239758017
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239758017 PREDICTED: similar to pseudoautosomal GTP-binding
protein-like protein [Homo sapiens]
(411 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239758017 PREDICTED: similar to pseudoautosomal GTP-binding p... 856 0.0
gi|6912588 pseudoautosomal GTP-binding protein-like protein [Hom... 241 9e-64
gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens] 40 0.003
gi|57864582 hornerin [Homo sapiens] 40 0.004
gi|113426153 PREDICTED: UPF0607 protein ENSP00000381418-like [Ho... 37 0.043
gi|5803029 ATP/GTP-binding protein isoform 1 [Homo sapiens] 37 0.043
gi|166706868 synaptopodin 2-like isoform a [Homo sapiens] 37 0.043
gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo ... 36 0.056
gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo ... 36 0.056
gi|113426467 PREDICTED: UPF0607 protein ENSP00000381418-like [Ho... 36 0.073
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 36 0.073
gi|239757829 PREDICTED: hypothetical protein [Homo sapiens] 35 0.095
gi|239753698 PREDICTED: hypothetical protein [Homo sapiens] 35 0.095
gi|239752340 PREDICTED: hypothetical protein XP_002348205 [Homo ... 35 0.095
gi|239748278 PREDICTED: hypothetical protein [Homo sapiens] 35 0.095
gi|239746853 PREDICTED: hypothetical protein XP_002343864 [Homo ... 35 0.095
gi|157388929 epsin 3 [Homo sapiens] 35 0.12
gi|53729339 mitochondrial translational initiation factor 2 prec... 35 0.16
gi|53729337 mitochondrial translational initiation factor 2 prec... 35 0.16
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 34 0.21
gi|145275189 specifically androgen-regulated protein isoform 1 [... 34 0.21
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 34 0.28
gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] 34 0.28
gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] 34 0.28
gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ... 34 0.28
gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens] 34 0.28
gi|46409372 G protein-coupled receptor 153 [Homo sapiens] 34 0.28
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 33 0.36
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 33 0.36
gi|188536004 zinc finger protein 469 [Homo sapiens] 33 0.36
>gi|239758017 PREDICTED: similar to pseudoautosomal GTP-binding
protein-like protein [Homo sapiens]
Length = 411
Score = 856 bits (2212), Expect = 0.0
Identities = 411/411 (100%), Positives = 411/411 (100%)
Query: 1 MGSGNSGRARRPRGSSECGCQRQPPFSALEDSNRVGSSWGLRLLVAFEDIGDPQPWKIPT 60
MGSGNSGRARRPRGSSECGCQRQPPFSALEDSNRVGSSWGLRLLVAFEDIGDPQPWKIPT
Sbjct: 1 MGSGNSGRARRPRGSSECGCQRQPPFSALEDSNRVGSSWGLRLLVAFEDIGDPQPWKIPT 60
Query: 61 GVDTRRRDPVPPSRALSHGTGRVGAAAGESSRAPRCWSGSRPRAPADPPRHRPHLCLSRH 120
GVDTRRRDPVPPSRALSHGTGRVGAAAGESSRAPRCWSGSRPRAPADPPRHRPHLCLSRH
Sbjct: 61 GVDTRRRDPVPPSRALSHGTGRVGAAAGESSRAPRCWSGSRPRAPADPPRHRPHLCLSRH 120
Query: 121 GSPPHHLGCLLGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVG 180
GSPPHHLGCLLGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVG
Sbjct: 121 GSPPHHLGCLLGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVG 180
Query: 181 YTNCGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGL 240
YTNCGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGL
Sbjct: 181 YTNCGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGL 240
Query: 241 IESFSATLEDVAHSVSVGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHP 300
IESFSATLEDVAHSVSVGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHP
Sbjct: 241 IESFSATLEDVAHSVSVGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHP 300
Query: 301 LGTGAGHSDTHSQGSGPQTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPS 360
LGTGAGHSDTHSQGSGPQTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPS
Sbjct: 301 LGTGAGHSDTHSQGSGPQTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPS 360
Query: 361 DTHTTRGRNNNCLLGLRLSVPQASHVPGREAERLPQPHRHSGPCSCRREPV 411
DTHTTRGRNNNCLLGLRLSVPQASHVPGREAERLPQPHRHSGPCSCRREPV
Sbjct: 361 DTHTTRGRNNNCLLGLRLSVPQASHVPGREAERLPQPHRHSGPCSCRREPV 411
>gi|6912588 pseudoautosomal GTP-binding protein-like protein [Homo
sapiens]
Length = 403
Score = 241 bits (615), Expect = 9e-64
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 132 GESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGKTTLIK 191
GESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGKTTLIK
Sbjct: 140 GESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGKTTLIK 199
Query: 192 ALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDV 251
ALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDV
Sbjct: 200 ALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDV 259
Query: 252 AHS 254
AHS
Sbjct: 260 AHS 262
>gi|110618248 mucin and cadherin-like isoform 1 [Homo sapiens]
Length = 845
Score = 40.4 bits (93), Expect = 0.003
Identities = 37/129 (28%), Positives = 46/129 (35%), Gaps = 16/129 (12%)
Query: 247 TLEDVAHSVSVGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAG 306
TL S G PG S +H G T + PG+ P +P G +GT
Sbjct: 509 TLRPPTSSTPGGPPGAENSTSHQPATPGGDT-AQTPKPGTSQP-MPPG------VGTSTS 560
Query: 307 HSDTHSQGSGPQTPTQPRGQALGHPLGTGARHSDTHKARGRA------FGHPLSPGAGPS 360
H G QTP Q + +GT H G A P+ PG G S
Sbjct: 561 HQPATPSGGTAQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQTPEAGTSQPMPPGMGTS 620
Query: 361 DTH--TTRG 367
+H TT G
Sbjct: 621 TSHQPTTPG 629
Score = 34.3 bits (77), Expect = 0.21
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 260 PGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQGSGPQT 319
PG+G S +H Q T S G ++TP + + +GT H G QT
Sbjct: 553 PGVGTSTSH-------QPATPSGGT-AQTPEPGTSQPMPPSMGTSTSHQPATPGGGTAQT 604
Query: 320 PTQPRGQALGHPLGTGARHSDTHKARGRA 348
P Q + +GT H T G A
Sbjct: 605 PEAGTSQPMPPGMGTSTSHQPTTPGGGTA 633
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 40.0 bits (92), Expect = 0.004
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 263 GCSDTHSARGLGT-QTHTHSQ-GPGS-RTPTLPRGRALRHPLGTGAGHSDTHS---QGSG 316
G S ++ G G+ Q+ H Q G GS ++P+ RGR G+G+G S ++S GSG
Sbjct: 2388 GSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRH-----GSGSGQSSSYSPYGSGSG 2442
Query: 317 PQTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTH----TTRGRNNNC 372
+ P GH G G R S + ++ G +G S +G S TH +T G++++C
Sbjct: 2443 WSSSRGPYESGSGHSSGLGHRESRSGQSSG--YGQHGS-SSGHSSTHGQHGSTSGQSSSC 2499
Score = 39.7 bits (91), Expect = 0.005
Identities = 40/121 (33%), Positives = 53/121 (43%), Gaps = 23/121 (19%)
Query: 263 GCSDTHSARGLGT-QTHTHS-QGPGS-RTPTLPRGRALRHPLGTGAGHSDTHSQ---GSG 316
G S + G G+ Q+ H QG GS ++P+ RGR G+G GHS +H Q GSG
Sbjct: 2624 GSSSHYGQHGSGSRQSSGHGRQGSGSGQSPS--RGRH-----GSGLGHSSSHGQHGSGSG 2676
Query: 317 PQTPTQPRGQALGHPL-----GTGARHSDTHKARGRAFGHPLSPG-----AGPSDTHTTR 366
+ P LGH +G+ HS + G GH S G +G S T
Sbjct: 2677 RSSSRGPYESRLGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQE 2736
Query: 367 G 367
G
Sbjct: 2737 G 2737
Score = 38.5 bits (88), Expect = 0.011
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 263 GCSDTHSARGLGT-QTHTHSQ-GPGS-RTPTLPRGRALRHPLGTGAGHSDTHS---QGSG 316
G S ++ G G+ Q+ H Q G GS ++P+ RGR G+G+G S ++ GSG
Sbjct: 978 GSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRH-----GSGSGQSSSYGPYRSGSG 1032
Query: 317 PQTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTH----TTRGRNNNC 372
+ P GH G G R S + ++ G +G S +G S TH +T G++++C
Sbjct: 1033 WSSSRGPYESGSGHSSGLGHRESRSGQSSG--YGQHGS-SSGHSSTHGQHGSTSGQSSSC 1089
Score = 38.1 bits (87), Expect = 0.015
Identities = 39/121 (32%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 263 GCSDTHSARGLGT-QTHTHS-QGPGS-RTPTLPRGRALRHPLGTGAGHSDTHSQ---GSG 316
G S + G G+ Q+ H QG GS +P+ RGR G+G+GHS +H Q GSG
Sbjct: 2154 GSSSRYGQHGSGSRQSSGHGRQGSGSGHSPS--RGRH-----GSGSGHSSSHGQHGSGSG 2206
Query: 317 PQTPTQPRGQALGHPL-----GTGARHSDTHKARGRAFGHPLSPG-----AGPSDTHTTR 366
+ P GH +G+ HS + G GH S G +G S T
Sbjct: 2207 RSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQE 2266
Query: 367 G 367
G
Sbjct: 2267 G 2267
Score = 37.7 bits (86), Expect = 0.019
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 14/118 (11%)
Query: 263 GCSDTHSARGLGT-QTHTHSQ-GPGS-RTPTLPRGRALRHPLGTGAGHS-DTHSQGSGPQ 318
G S ++ G G+ Q+ HS+ G GS ++P+ RGR H G+ S H GSG
Sbjct: 512 GSSSSYGQHGSGSRQSLGHSRHGSGSGQSPSPSRGR---HESGSRQSSSYGPHGYGSGRS 568
Query: 319 TPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTH----TTRGRNNNC 372
+ P GH G G H ++ + +G S +G S TH +T G++++C
Sbjct: 569 SSRGPYESGSGHSSGLG--HQESRSGQSSGYGQHGS-SSGHSSTHGQHGSTSGQSSSC 623
Score = 37.0 bits (84), Expect = 0.033
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 23/121 (19%)
Query: 263 GCSDTHSARGLGT-QTHTHS-QGPGS-RTPTLPRGRALRHPLGTGAGHSDTHSQ---GSG 316
G S + G G+ Q+ H QG GS +P+ RGR G+G GHS +H Q GSG
Sbjct: 1214 GSSSHYGQHGSGSRQSSGHGRQGSGSGHSPS--RGRH-----GSGLGHSSSHGQHGSGSG 1266
Query: 317 PQTPTQPRGQALGHPL-----GTGARHSDTHKARGRAFGHPLSPG-----AGPSDTHTTR 366
+ P GH +G+ HS + G GH S G +G S T
Sbjct: 1267 RSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQE 1326
Query: 367 G 367
G
Sbjct: 1327 G 1327
Score = 36.2 bits (82), Expect = 0.056
Identities = 38/127 (29%), Positives = 47/127 (37%), Gaps = 25/127 (19%)
Query: 254 SVSVGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQ 313
S S R G S + + G G Q Q P RGR G+G GHS +H Q
Sbjct: 1683 SRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPS-------RGRH-----GSGLGHSSSHGQ 1730
Query: 314 ---GSGPQTPTQPRGQALGHPL-----GTGARHSDTHKARGRAFGHPLSPG-----AGPS 360
GSG + P GH +G+ HS + G GH S G +G S
Sbjct: 1731 HGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQHGSTSGQS 1790
Query: 361 DTHTTRG 367
T G
Sbjct: 1791 STFDQEG 1797
Score = 34.7 bits (78), Expect = 0.16
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 11/109 (10%)
Query: 263 GCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQGSGPQTPTQ 322
G S +S G G+ + GSR+ RG R G+ + + GSG +
Sbjct: 239 GQSSGYSQHGSGSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQ---HGSGSR---- 291
Query: 323 PRGQALGHPL-GTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRGRNN 370
Q+LGH G+G+R S +H G GH S G S + + R +
Sbjct: 292 ---QSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHGSGSSYSYSRGH 337
Score = 33.5 bits (75), Expect = 0.36
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 302 GTGAGHSDTHSQGSGPQTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSD 361
G+G+GHS H Q G ++ RG+ G G+ + + ++ GH
Sbjct: 482 GSGSGHSSGHGQ-HGSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQS 540
Query: 362 THTTRGRNNNCLLGLRLSVPQASH--VPGREAERLP 395
+RGR+ + G R S H GR + R P
Sbjct: 541 PSPSRGRHES---GSRQSSSYGPHGYGSGRSSSRGP 573
Score = 33.5 bits (75), Expect = 0.36
Identities = 39/135 (28%), Positives = 52/135 (38%), Gaps = 31/135 (22%)
Query: 254 SVSVGRPGIGCSDTHSA----RGLGTQT----HTHSQGPGSRTPTLPRGRALRHPLGTGA 305
S S GR G G + S+ GLG + H S G S +H G+G+
Sbjct: 1138 SPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYS--------QH--GSGS 1187
Query: 306 GHSD---THSQGSGPQTPTQPRGQALGHPL-----GTGARHSDTHKARGRAFGHPLS--- 354
GHS H SG + + G + G G+G+R S H +G GH S
Sbjct: 1188 GHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHSPSRGR 1247
Query: 355 --PGAGPSDTHTTRG 367
G G S +H G
Sbjct: 1248 HGSGLGHSSSHGQHG 1262
Score = 33.1 bits (74), Expect = 0.47
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 13/108 (12%)
Query: 263 GCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQ-GSGPQTPT 321
G S ++S G G+ + GSR+ RG RH G+ +G S + Q GSG +
Sbjct: 1175 GQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGE--RH--GSSSGSSSHYGQHGSGSR--- 1227
Query: 322 QPRGQALGHPL-GTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRGR 368
Q+ GH G+G+ HS + G GH S G S + + R
Sbjct: 1228 ----QSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSSSR 1271
Score = 33.1 bits (74), Expect = 0.47
Identities = 36/117 (30%), Positives = 47/117 (40%), Gaps = 8/117 (6%)
Query: 254 SVSVGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQ 313
S S G G G S S+RG HS G G R + G+ +GHS TH Q
Sbjct: 1961 SSSYGPYGSG-SGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQH-GSSSGHSSTHGQ 2018
Query: 314 ---GSGPQTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRG 367
SG + G + G G S + ++ G +G S G+G S H RG
Sbjct: 2019 HGSASGQSSSCGQHGASSGQSSSHGQHGSGSSQSSG--YGRQGS-GSGQSPGHGQRG 2072
Score = 32.7 bits (73), Expect = 0.61
Identities = 36/134 (26%), Positives = 52/134 (38%), Gaps = 24/134 (17%)
Query: 250 DVAHSVSVGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSD 309
D HS S G+ G G S S+ G S G G ++ + +H G+G+ HS
Sbjct: 668 DFGHSSSYGQHGSG-SGWSSSNGPHGSVSGQSSGFGHKSGSGQSSGYSQH--GSGSSHSS 724
Query: 310 ---THSQGSGPQTPTQPRG-----------------QALGHPL-GTGARHSDTHKARGRA 348
H SG + ++ G Q+ GH G+G+ HS + G +
Sbjct: 725 GYRKHGSRSGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSS 784
Query: 349 FGHPLSPGAGPSDT 362
GH S G S T
Sbjct: 785 SGHSSSHGQHGSGT 798
Score = 32.7 bits (73), Expect = 0.61
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 13/108 (12%)
Query: 263 GCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQ-GSGPQTPT 321
G S ++S G G+ + GSR+ RG RH G+ +G S + Q GSG +
Sbjct: 2115 GQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGE--RH--GSSSGSSSRYGQHGSGSR--- 2167
Query: 322 QPRGQALGHPL-GTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRGR 368
Q+ GH G+G+ HS + G GH S G S + + R
Sbjct: 2168 ----QSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSR 2211
Score = 32.3 bits (72), Expect = 0.80
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Query: 253 HSVSVGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDT-- 310
HS S G+ G G + S+ G+ + S + + +H G+G+GHS +
Sbjct: 1371 HSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGCTQH--GSGSGHSSSYE 1428
Query: 311 -HSQGSGPQTPTQPRGQALGHPL-----GTGARHSDTHKARGRAFGHPLSPGAG 358
H SG + + G + G G+G+R S H G G SP G
Sbjct: 1429 QHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRG 1482
Score = 32.0 bits (71), Expect = 1.0
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 27/133 (20%)
Query: 266 DTHSAR-GLGTQTHTHSQGPGSRTPTLPRGRALRHPLG-----TGAGHSDT-----HSQG 314
+ H +R G ++ H GS + G R LG +G+G S + H G
Sbjct: 1428 EQHGSRSGQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSG 1487
Query: 315 SGPQTPTQPRGQALG-----HPLGTGARHS------DTHKARGRAFGHPLSPGAGPSDTH 363
SG + P G G P +G+ HS ++ + +G S +G S TH
Sbjct: 1488 SGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGS-SSGHSSTH 1546
Query: 364 ----TTRGRNNNC 372
+T G++++C
Sbjct: 1547 GQHGSTSGQSSSC 1559
Score = 32.0 bits (71), Expect = 1.0
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 7/102 (6%)
Query: 269 SARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQ---GSGPQTPTQPRG 325
S+RG +HS G G R + G+ +GHS TH Q SG + G
Sbjct: 1505 SSRGPYESGSSHSSGLGHRESRSGQSSGYGQH-GSSSGHSSTHGQHGSTSGQSSSCGQHG 1563
Query: 326 QALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRG 367
+ G G S + ++ G +G S G+G S H RG
Sbjct: 1564 ASSGQSSSHGQHGSGSSQSSG--YGRQGS-GSGQSPGHGQRG 1602
Score = 32.0 bits (71), Expect = 1.0
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Query: 253 HSVSVGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDT-- 310
HS S G+ G G + S+ G+ + S + + +H G+G+GHS +
Sbjct: 1841 HSSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQH--GSGSGHSSSYE 1898
Query: 311 -HSQGSGPQTPTQPRGQALGHPL-----GTGARHSDTHKARGRAFGHPLSPGAG 358
H SG + + G + G G+G+R S H G G SP G
Sbjct: 1899 QHGSRSGQSSRGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRG 1952
Score = 31.6 bits (70), Expect = 1.4
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 10/112 (8%)
Query: 259 RPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQ---GS 315
R G G S S+RG HS G G R + G+ +GHS TH Q S
Sbjct: 1028 RSGSGWS---SSRGPYESGSGHSSGLGHRESRSGQSSGYGQH-GSSSGHSSTHGQHGSTS 1083
Query: 316 GPQTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRG 367
G + G + G G S + ++ G +G S G+G S H RG
Sbjct: 1084 GQSSSCGQHGASSGQSSSHGQHGSGSSQSSG--YGRQGS-GSGQSPGHGQRG 1132
Score = 30.8 bits (68), Expect = 2.3
Identities = 32/116 (27%), Positives = 43/116 (37%), Gaps = 22/116 (18%)
Query: 253 HSVSVGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDTHS 312
HS G+ G S G ++ H GS + G R LG G
Sbjct: 253 HSSGYGQHG-------SRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGR------- 298
Query: 313 QGSGP-QTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRG 367
QGSG Q+P+ R G+G+ HS +H G + S G S + T G
Sbjct: 299 QGSGSRQSPSHVRH-------GSGSGHSSSHGQHGSGSSYSYSRGHYESGSGQTSG 347
Score = 30.8 bits (68), Expect = 2.3
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 269 SARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQ---GSGPQTPTQPRG 325
S+RG HS G G R + G+ +GHS TH Q SG + G
Sbjct: 2445 SSRGPYESGSGHSSGLGHRESRSGQSSGYGQH-GSSSGHSSTHGQHGSTSGQSSSCGQHG 2503
Query: 326 QALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRG 367
+ G G S + ++ G +G S G+G S H RG
Sbjct: 2504 ASSGQSSSHGQHGSGSSQSSG--YGRQGS-GSGQSPGHGQRG 2542
Score = 30.0 bits (66), Expect = 4.0
Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 10/119 (8%)
Query: 253 HSVSVGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRAL-RHPLGTGAGHSDT- 310
HS S G+ G G S ++S RG + G G + +H G+G+GHS +
Sbjct: 318 HSSSHGQHGSGSSYSYS-RGHYESGSGQTSGFGQHESGSGQSSGYSKH--GSGSGHSSSQ 374
Query: 311 --HSQGSGPQTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRG 367
H SG + + G + G S + + GR S G+G S H RG
Sbjct: 375 GQHGSTSGQASSSGQHGSSSRQSSSYGQHESASRHSSGRG---QHSSGSGQSPGHGQRG 430
Score = 30.0 bits (66), Expect = 4.0
Identities = 38/153 (24%), Positives = 52/153 (33%), Gaps = 19/153 (12%)
Query: 253 HSVSVGRPGIGCSDT--HSARGLGTQTHTHSQGPGSRTPTLPRGRAL---RHPLGTGAGH 307
H+ GR G G + H RG G+ Q P GR+ RH G+G
Sbjct: 876 HASGRGRHGSGSGQSPGHGQRGSGS-----GQSPSYGRHGSGSGRSSSSGRHGSGSGQSS 930
Query: 308 SDTHSQGSGPQTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRG 367
H SG + G GH + +H R+ H S G+ S G
Sbjct: 931 GFGHKSSSGQSSGYTQHGSGSGHS-SSYEQHGSRSGQSSRSEQHGSSSGSSSS-----YG 984
Query: 368 RNNNCLLGLRLSVPQASHVPGREAERLPQPHRH 400
++ + G R S+ H G P RH
Sbjct: 985 QHGS---GSRQSLGHGQHGSGSGQSPSPSRGRH 1014
Score = 29.6 bits (65), Expect = 5.2
Identities = 33/116 (28%), Positives = 43/116 (37%), Gaps = 10/116 (8%)
Query: 254 SVSVGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQ 313
S S G G G S S+RG HS G G + + G+ +GHS TH Q
Sbjct: 555 SSSYGPHGYG-SGRSSSRGPYESGSGHSSGLGHQESRSGQSSGYGQH-GSSSGHSSTHGQ 612
Query: 314 ---GSGPQTPTQPRGQALGHPL-----GTGARHSDTHKARGRAFGHPLSPGAGPSD 361
SG + G G G+G+ S + +G G S G SD
Sbjct: 613 HGSTSGQSSSCGQHGATSGQSSSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSD 668
Score = 29.3 bits (64), Expect = 6.8
Identities = 32/124 (25%), Positives = 43/124 (34%), Gaps = 22/124 (17%)
Query: 253 HSVSVGRPGIG------CSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAG 306
HS S G+ G G C S G + H G G +H G+ +G
Sbjct: 787 HSSSHGQHGSGTSCSSSCGHYESGSGQASGFGQHESGSGQGYS--------QH--GSASG 836
Query: 307 HSDT---HSQGSGPQTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTH 363
H + H SG + + + G G S +H A GR G+G S H
Sbjct: 837 HFSSQGRHGSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRG---RHGSGSGQSPGH 893
Query: 364 TTRG 367
RG
Sbjct: 894 GQRG 897
>gi|113426153 PREDICTED: UPF0607 protein ENSP00000381418-like [Homo
sapiens]
Length = 415
Score = 36.6 bits (83), Expect = 0.043
Identities = 40/127 (31%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 55 PWKIPTGVDTRRRDPVPPSRALSHGTGRVGAAAGESSRAPRCWSGSRPRAPADPPRHRPH 114
P + G D + +DP AL AAG SSR R SG + PP
Sbjct: 289 PGLLMVGEDMQPKDPA----ALGSSRSSPPRAAGHSSRK-RKLSGPLLQLQLTPPLQ--- 340
Query: 115 LCLSR-HGSPPHHLGCLLGESFM--QLQQRLLREKEAKIRKAL------DRLRKKRHLLR 165
L R G PP L CL E+ + Q QR R ++ + K + + R+ R LLR
Sbjct: 341 LRWDRDEGPPPAKLPCLSPEALLVGQASQREGRLQQGNMHKNMRVLSRTSKFRRLRELLR 400
Query: 166 RQRTRRE 172
R++ RR+
Sbjct: 401 RRKERRQ 407
>gi|5803029 ATP/GTP-binding protein isoform 1 [Homo sapiens]
Length = 425
Score = 36.6 bits (83), Expect = 0.043
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 164 LRRQRTRREF--PVISVVGYTNCGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSR 221
+RRQ + E P + VVG T+ GK+T+ + L A R + LDV + ++P
Sbjct: 103 MRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGT 162
Query: 222 MTVLYVD-----TIGFLSQLPHGLIESFSAT 247
M LY++ GF Q P L+ F +T
Sbjct: 163 MGALYIERPADVEEGFSIQAP--LVYHFGST 191
>gi|166706868 synaptopodin 2-like isoform a [Homo sapiens]
Length = 977
Score = 36.6 bits (83), Expect = 0.043
Identities = 49/211 (23%), Positives = 79/211 (37%), Gaps = 22/211 (10%)
Query: 191 KALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLED 250
++ G A ++ RDQL A V+ + S M++ +D G T++
Sbjct: 39 RSQAGRAGLRERDQLLAINGVSCTNLSHASAMSL--IDASG----------NQLVLTVQR 86
Query: 251 VAHSVSVGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDT 310
+A V P H + L + + PG+ P + +LR P + A + +T
Sbjct: 87 LADEGPVQSPS-----PHELQVLSPLSPLSPEPPGAPVPQPLQPGSLRSPPDSEAYYGET 141
Query: 311 HSQGSGPQT---PTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRG 367
S GP T P +PR + P GA + + + A P P GP +R
Sbjct: 142 DSDADGPATQEKPRRPRRRGPTRPTPPGAPPDEVYLSDSPAEPAPTIP--GPPSQGDSRV 199
Query: 368 RNNNCLLGLRLSVPQASHVPGREAERLPQPH 398
+ + G L P A + P PH
Sbjct: 200 SSPSWEDGAALQPPPAEALLLPHGPLRPGPH 230
>gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo
sapiens]
Length = 229
Score = 36.2 bits (82), Expect = 0.056
Identities = 33/102 (32%), Positives = 39/102 (38%), Gaps = 17/102 (16%)
Query: 258 GRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQGSGP 317
GRP G S S R + +GPG P P + R P G AG S +Q S P
Sbjct: 41 GRPAGGASPPPSPR-------SRPEGPGPPRPATP---SARRPQGLSAGVSAGPAQRSRP 90
Query: 318 QTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGP 359
PR +A L R GRA P +P GP
Sbjct: 91 LQLAGPRDRAPARALHARTR-------MGRAARGPPAPSRGP 125
Score = 34.3 bits (77), Expect = 0.21
Identities = 45/161 (27%), Positives = 61/161 (37%), Gaps = 12/161 (7%)
Query: 11 RPRGSSECGCQRQPPFSALEDSNRVGSSWGLRLLVAFED------IGDPQPWKIPTGVDT 64
RPRG + G R P SA ++ S GLRL + P P P G
Sbjct: 5 RPRGPHQGGTPRPLPASAGAQGSQARS--GLRLCRTTQGRPAGGASPPPSPRSRPEGPGP 62
Query: 65 RRRDPVPPSRALSHGTGRVGAAAGESSRA-PRCWSGSRPRAPADPPRHRPHLCLSRHGSP 123
R P PS G G +AG + R+ P +G R RAPA R + + G P
Sbjct: 63 PR--PATPSARRPQGLS-AGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPP 119
Query: 124 PHHLGCLLGESFMQLQQRLLREKEAKIRKALDRLRKKRHLL 164
G L ++ +RL +R D + +R L
Sbjct: 120 APSRGPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQQL 160
>gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo
sapiens]
Length = 229
Score = 36.2 bits (82), Expect = 0.056
Identities = 33/102 (32%), Positives = 39/102 (38%), Gaps = 17/102 (16%)
Query: 258 GRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQGSGP 317
GRP G S S R + +GPG P P + R P G AG S +Q S P
Sbjct: 41 GRPAGGASPPPSPR-------SRPEGPGPPRPATP---SARRPQGLSAGVSAGPAQRSRP 90
Query: 318 QTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGP 359
PR +A L R GRA P +P GP
Sbjct: 91 LQLAGPRDRAPARALHARTR-------MGRAARGPPAPSRGP 125
Score = 34.3 bits (77), Expect = 0.21
Identities = 45/161 (27%), Positives = 61/161 (37%), Gaps = 12/161 (7%)
Query: 11 RPRGSSECGCQRQPPFSALEDSNRVGSSWGLRLLVAFED------IGDPQPWKIPTGVDT 64
RPRG + G R P SA ++ S GLRL + P P P G
Sbjct: 5 RPRGPHQGGTPRPLPASAGAQGSQARS--GLRLCRTTQGRPAGGASPPPSPRSRPEGPGP 62
Query: 65 RRRDPVPPSRALSHGTGRVGAAAGESSRA-PRCWSGSRPRAPADPPRHRPHLCLSRHGSP 123
R P PS G G +AG + R+ P +G R RAPA R + + G P
Sbjct: 63 PR--PATPSARRPQGLS-AGVSAGPAQRSRPLQLAGPRDRAPARALHARTRMGRAARGPP 119
Query: 124 PHHLGCLLGESFMQLQQRLLREKEAKIRKALDRLRKKRHLL 164
G L ++ +RL +R D + +R L
Sbjct: 120 APSRGPLKRVTWTCAVRRLWTSWAWALRGGTDPVLDRRQQL 160
>gi|113426467 PREDICTED: UPF0607 protein ENSP00000381418-like [Homo
sapiens]
Length = 415
Score = 35.8 bits (81), Expect = 0.073
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 55 PWKIPTGVDTRRRDPVPPSRALSHGTGRVGAAAGESSRAPRCWSGSRPRAPADPPRHRPH 114
P + G D + +DP AL AAG SSR R SG + PP
Sbjct: 289 PGLLMVGEDMQPKDPA----ALGSSRSSPPRAAGHSSRK-RKLSGPLLQLQLTPPLQ--- 340
Query: 115 LCLSRH-GSPPHHLGCLLGESFM---------QLQQRLLREKEAKIRKALDRLRKKRHLL 164
L R+ G PP L CL E+ + +LQQ + K ++ + R+ R LL
Sbjct: 341 LRWDRNEGPPPAKLPCLSPEALLVGQASQGGGRLQQGNMH-KNMRVLSRTSKFRRLRELL 399
Query: 165 RRQRTRRE 172
RR++ RR+
Sbjct: 400 RRRKERRQ 407
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 35.8 bits (81), Expect = 0.073
Identities = 25/88 (28%), Positives = 32/88 (36%), Gaps = 1/88 (1%)
Query: 282 QGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQGSGPQTPTQPRGQALGHPLGTGARHSDT 341
QG SR+P P G+ P G G+ PQ P P G+ G P G++
Sbjct: 83 QGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPP-GKPQGPPAQGGSKSQSA 141
Query: 342 HKARGRAFGHPLSPGAGPSDTHTTRGRN 369
G+ G P G P G N
Sbjct: 142 RSPPGKPQGPPQQEGNNPQGPPPPAGGN 169
>gi|239757829 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 35.4 bits (80), Expect = 0.095
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 304 GAGHSDTHSQGSGPQTPTQPRGQALGHPLGTGARHSDTHKAR-GRAFGHPLSPGA 357
G GH D H Q GPQ P P Q G +G H + + HP S A
Sbjct: 33 GKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKASHQLQHPQSRAA 87
>gi|239753698 PREDICTED: hypothetical protein [Homo sapiens]
Length = 416
Score = 35.4 bits (80), Expect = 0.095
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 21/141 (14%)
Query: 257 VGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPT-LPRG--RALRHPLGTGAGHSDTHSQ 313
VGR G+ S + +A T PGS P LPR R L GA ++ S
Sbjct: 77 VGRGGLLSSWSRAAP---TPRSAAEAPPGSAIPAHLPRSVQRVL------GARRTEPRSA 127
Query: 314 GSGPQTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRGRNNNCL 373
G R +AL G + + R+ P + GAGP RGR ++
Sbjct: 128 GE--------RRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSP 179
Query: 374 LG-LRLSVPQASHVPGREAER 393
LG SVP S +P RE ER
Sbjct: 180 LGFFSPSVPSRSPLPEREPER 200
>gi|239752340 PREDICTED: hypothetical protein XP_002348205 [Homo
sapiens]
Length = 218
Score = 35.4 bits (80), Expect = 0.095
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 304 GAGHSDTHSQGSGPQTPTQPRGQALGHPLGTGARHSDTHKAR-GRAFGHPLSPGA 357
G GH D H Q GPQ P P Q G +G H + + HP S A
Sbjct: 49 GKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKASHQLQHPQSRAA 103
>gi|239748278 PREDICTED: hypothetical protein [Homo sapiens]
Length = 416
Score = 35.4 bits (80), Expect = 0.095
Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 21/141 (14%)
Query: 257 VGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPT-LPRG--RALRHPLGTGAGHSDTHSQ 313
VGR G+ S + +A T PGS P LPR R L GA ++ S
Sbjct: 77 VGRGGLLSSWSRAAP---TPRSAAEAPPGSAIPAHLPRSVQRVL------GARRTEPRSA 127
Query: 314 GSGPQTPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRGRNNNCL 373
G R +AL G + + R+ P + GAGP RGR ++
Sbjct: 128 GE--------RRRALPAAAGRKTKTWQSQNQSPRSARAPHTAGAGPGPGPEPRGRRSHSP 179
Query: 374 LG-LRLSVPQASHVPGREAER 393
LG SVP S +P RE ER
Sbjct: 180 LGFFSPSVPSRSPLPEREPER 200
>gi|239746853 PREDICTED: hypothetical protein XP_002343864 [Homo
sapiens]
Length = 218
Score = 35.4 bits (80), Expect = 0.095
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 304 GAGHSDTHSQGSGPQTPTQPRGQALGHPLGTGARHSDTHKAR-GRAFGHPLSPGA 357
G GH D H Q GPQ P P Q G +G H + + HP S A
Sbjct: 49 GKGHHDHHHQPHGPQAPLAPGNQQHGQDVGIAVGHDQQGQQKASHQLQHPQSRAA 103
>gi|157388929 epsin 3 [Homo sapiens]
Length = 632
Score = 35.0 bits (79), Expect = 0.12
Identities = 35/135 (25%), Positives = 48/135 (35%), Gaps = 13/135 (9%)
Query: 281 SQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQGSGP-----QTPTQPRGQALGHPLGTG 335
S P RTP LP G P + H S G+ P +T P G + P
Sbjct: 369 SSEPWGRTPVLPAGPPTTDPWALNSPHHKLPSTGADPWGASLETSDTPGGASTFDPFAKP 428
Query: 336 ARHSDTHKARGRAF--GHPLSP-----GAGPSDTHTTRGRNNNCLLGLRLSVPQASHVPG 388
++T + +A G P SP PS + G L L + + +A P
Sbjct: 429 PESTETKEGLEQALPSGKPSSPVELDLFGDPSPSSKQNGTKEPDALDLGI-LGEALTQPS 487
Query: 389 REAERLPQPHRHSGP 403
+EA P GP
Sbjct: 488 KEARACRTPESFLGP 502
>gi|53729339 mitochondrial translational initiation factor 2
precursor [Homo sapiens]
Length = 727
Score = 34.7 bits (78), Expect = 0.16
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 143 LREKEAKIRKALDRLRKKRHLLRRQRTRREF-----PVISVVGYTNCGKTTLIKAL--TG 195
++ K +K+++ D++RK + +RR + PV++++G+ + GKTTL+ T
Sbjct: 147 MKLKWSKLKQ--DKVRKNKDAVRRPQADPALLTPRSPVVTIMGHVDHGKTTLLDKFRKTQ 204
Query: 196 DAAIQPRDQLFATLDVTAHAG----TLPSRMTVLYVDTIG 231
AA++ T +T H G +LPS + ++DT G
Sbjct: 205 VAAVE-------TGGITQHIGAFLVSLPSGEKITFLDTPG 237
>gi|53729337 mitochondrial translational initiation factor 2
precursor [Homo sapiens]
Length = 727
Score = 34.7 bits (78), Expect = 0.16
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 143 LREKEAKIRKALDRLRKKRHLLRRQRTRREF-----PVISVVGYTNCGKTTLIKAL--TG 195
++ K +K+++ D++RK + +RR + PV++++G+ + GKTTL+ T
Sbjct: 147 MKLKWSKLKQ--DKVRKNKDAVRRPQADPALLTPRSPVVTIMGHVDHGKTTLLDKFRKTQ 204
Query: 196 DAAIQPRDQLFATLDVTAHAG----TLPSRMTVLYVDTIG 231
AA++ T +T H G +LPS + ++DT G
Sbjct: 205 VAAVE-------TGGITQHIGAFLVSLPSGEKITFLDTPG 237
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 34.3 bits (77), Expect = 0.21
Identities = 37/142 (26%), Positives = 54/142 (38%), Gaps = 19/142 (13%)
Query: 239 GLIESFSATLEDVA--HSVSVGRPGIGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRGRA 296
G ++ +SA +E++ H G+G S + S R Q+ T S+GP P P
Sbjct: 1013 GDVDDYSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAP 1072
Query: 297 LRHPLGTGAGHSDTHSQGS------GPQTPTQPRGQALGHPLGTGARHSDTHK------A 344
R P A S +Q + P P +P+ P+ R + + A
Sbjct: 1073 SRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGA 1132
Query: 345 RGRA-----FGHPLSPGAGPSD 361
R A FG P SPG D
Sbjct: 1133 RSPAPTRKEFGAPKSPGTTRKD 1154
>gi|145275189 specifically androgen-regulated protein isoform 1
[Homo sapiens]
Length = 601
Score = 34.3 bits (77), Expect = 0.21
Identities = 40/142 (28%), Positives = 48/142 (33%), Gaps = 33/142 (23%)
Query: 262 IGCSDTHSARGLGTQTHTHSQGPGSRTPTLPRG-RAL--RHPLGTGAGHSDTHSQGSGPQ 318
IG DT + GL T S T PRG RAL P G QG P+
Sbjct: 58 IGSLDTEADSGLSTDE--------SEPATTPRGFRALPITQPTPRGGPEETITQQGRTPR 109
Query: 319 TPTQPRGQALGHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRGRNNNCLLGLRL 378
T T+ P G G R + P + H R +N R
Sbjct: 110 TVTESSSSHPPEPQGLGLRSGSY---------------SLPRNIHIARSQN------FRK 148
Query: 379 SVPQA-SHVPGREAERLPQPHR 399
S QA SH PG P+P +
Sbjct: 149 STTQASSHNPGEPGRLAPEPEK 170
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 33.9 bits (76), Expect = 0.28
Identities = 27/103 (26%), Positives = 36/103 (34%), Gaps = 9/103 (8%)
Query: 269 SARGLGTQTHTHSQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQGSGPQTPTQPRGQAL 328
S G G+ S G GS + + + G+ G G Q +G A
Sbjct: 495 SGNGRGSGGGQGSNGQGSSSHSSGGNQCSGEGQGSRGGQGSNGQGSGGNQCSRDGQGTAG 554
Query: 329 GHPLGTGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRGRNNN 371
GH G G R H + G G GP D H + G N+
Sbjct: 555 GHGSGGGQRPGGGHGSGG---------GQGPGDGHGSGGGKNS 588
>gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 33.9 bits (76), Expect = 0.28
Identities = 22/42 (52%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 74 RALSHGTGRVGAAAGESSRAPRCWSGSRPRAPADPPRHRPHL 115
+ALS GTG VGA + S A S RPRAP PP PHL
Sbjct: 2 QALSPGTGPVGAPSRCSPSALPLTSPRRPRAP--PPTLAPHL 41
>gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 33.9 bits (76), Expect = 0.28
Identities = 22/42 (52%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 74 RALSHGTGRVGAAAGESSRAPRCWSGSRPRAPADPPRHRPHL 115
+ALS GTG VGA + S A S RPRAP PP PHL
Sbjct: 2 QALSPGTGPVGAPSRCSPSALPLTSPRRPRAP--PPTLAPHL 41
>gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo
sapiens]
Length = 344
Score = 33.9 bits (76), Expect = 0.28
Identities = 22/42 (52%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 74 RALSHGTGRVGAAAGESSRAPRCWSGSRPRAPADPPRHRPHL 115
+ALS GTG VGA + S A S RPRAP PP PHL
Sbjct: 2 QALSPGTGPVGAPSRCSPSALPLTSPRRPRAP--PPTLAPHL 41
>gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens]
Length = 271
Score = 33.9 bits (76), Expect = 0.28
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 10/97 (10%)
Query: 71 PPSRALSHGTGRVGAAAGESSRAPRCWSGSR--PRAPADPPRHRPHLCLSRHGSPPHHLG 128
PPS + S T + + S+ AP +R P APA+PP P GS H G
Sbjct: 41 PPSSS-SSSTSSTSSTSSSSTTAPLLPKAAREKPEAPAEPPGPGP-------GSGAHPGG 92
Query: 129 CLLGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLR 165
++ + QQ+L R+ ++ RK + L LR
Sbjct: 93 SARPDAKEEQQQQLRRKINSRERKRMQDLNLAMDALR 129
>gi|46409372 G protein-coupled receptor 153 [Homo sapiens]
Length = 609
Score = 33.9 bits (76), Expect = 0.28
Identities = 31/100 (31%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Query: 51 GDPQPWKI-PTGVDTRRRDPVPPSRALSHGTGRVGAAAGESSRAPRCWSGSRPRA----- 104
G PQ + + P D + VPP+R SH V AA + PR SG A
Sbjct: 369 GLPQLYPLRPLQEDKMQYLQVPPTRRFSHDDADVWAAVPLPAFLPRWGSGEDLAALAHLV 428
Query: 105 -PADPPRHRPHLCLSRHGSPPHHLGCLLGESFMQLQQRLL 143
PA P R R L +PP ES + L+ L
Sbjct: 429 LPAGPERRRASLLAFAEDAPPSRARRRSAESLLSLRPSAL 468
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 33.5 bits (75), Expect = 0.36
Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 18/120 (15%)
Query: 284 PGSRTPTLPRGRALRHPLGT----------GAGHSDTHSQGSGPQTPTQPRGQALGHPLG 333
PGS P P A H LG A HS S+G T+P+ G G
Sbjct: 66 PGSPEPPPPPPPAAPHVLGARVAAGPTHRLSASHSRVSSRG---PVGTKPKRPGQGRRAG 122
Query: 334 TGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRGRNNNCLLGLRLSVPQASHVPGREAER 393
R + R RA +S + P +R R+ + LRLS P + H + +ER
Sbjct: 123 ARMRSAAPASPRARA-ARAISNQSSPPPPPPSRARSRS----LRLSAPGSRHDAEKASER 177
Score = 30.8 bits (68), Expect = 2.3
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 56 WKIPTGVDTRRRDPVPPSRALSHGTGRVGAAAGESSRA------PRCWSGSRPRAPADPP 109
WK P+ + R PPSR G + SSR PR GS P P PP
Sbjct: 19 WK-PSSLIHPARSNQPPSRTCPPLPGPPSRSRSPSSRLKLPADPPRALPGS-PEPPPPPP 76
Query: 110 RHRPHLCLSRHGSPPHH 126
PH+ +R + P H
Sbjct: 77 PAAPHVLGARVAAGPTH 93
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 33.5 bits (75), Expect = 0.36
Identities = 34/120 (28%), Positives = 46/120 (38%), Gaps = 18/120 (15%)
Query: 284 PGSRTPTLPRGRALRHPLGT----------GAGHSDTHSQGSGPQTPTQPRGQALGHPLG 333
PGS P P A H LG A HS S+G T+P+ G G
Sbjct: 66 PGSPEPPPPPPPAAPHVLGARVAAGPTHRLSASHSRVSSRG---PVGTKPKRPGQGRRAG 122
Query: 334 TGARHSDTHKARGRAFGHPLSPGAGPSDTHTTRGRNNNCLLGLRLSVPQASHVPGREAER 393
R + R RA +S + P +R R+ + LRLS P + H + +ER
Sbjct: 123 ARMRSAAPASPRARA-ARAISNQSSPPPPPPSRARSRS----LRLSAPGSRHDAEKASER 177
Score = 30.8 bits (68), Expect = 2.3
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 56 WKIPTGVDTRRRDPVPPSRALSHGTGRVGAAAGESSRA------PRCWSGSRPRAPADPP 109
WK P+ + R PPSR G + SSR PR GS P P PP
Sbjct: 19 WK-PSSLIHPARSNQPPSRTCPPLPGPPSRSRSPSSRLKLPADPPRALPGS-PEPPPPPP 76
Query: 110 RHRPHLCLSRHGSPPHH 126
PH+ +R + P H
Sbjct: 77 PAAPHVLGARVAAGPTH 93
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 33.5 bits (75), Expect = 0.36
Identities = 37/136 (27%), Positives = 47/136 (34%), Gaps = 14/136 (10%)
Query: 281 SQGPGSRTPTLPRGRALRHPLGTGAGHSDTHSQGS--GPQTPTQPRGQALGHPLGTGARH 338
+QGP P PR A + G GA + GS GP Q RG + G AR
Sbjct: 1099 TQGPREDEPQKPRKAARQEAGGDGAPANPEEPGGSRPGPGRSPQARGPSRSLETGAAARE 1158
Query: 339 SDTHKARGRAFGHPLSPGAGPSDTHTTRGRNNNCLLGLRLSVPQASHVPGREAERLPQPH 398
K R P P P++T T+ + L PQ + P E P
Sbjct: 1159 GGP-KCADRPSVAPKDPLQVPTNTETSEETRPS------LDFPQEAKEPETAEESAPDST 1211
Query: 399 R-----HSGPCSCRRE 409
S P +C E
Sbjct: 1212 EFTEALRSPPAACAGE 1227
Score = 28.9 bits (63), Expect = 8.9
Identities = 27/80 (33%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Query: 284 PGSRTPTLPRGRALRHPLGTGAGHSDTHSQGSGPQTPTQPRGQALGHPLGTGARHSDTHK 343
PG P P RH GT + +PT G LG P GT A S K
Sbjct: 1232 PGLLIPEQPPPS--RHDTGTPKPSGSLANTAPHGSSPTPGVGSLLGGPGGTQAPVSHNSK 1289
Query: 344 -ARGRAFGHPLSPGAGPSDT 362
R G L+P A PS T
Sbjct: 1290 DPPARQPGEFLAPVANPSST 1309
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,717,803
Number of Sequences: 37866
Number of extensions: 1224408
Number of successful extensions: 5785
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 172
Number of HSP's that attempted gapping in prelim test: 5492
Number of HSP's gapped (non-prelim): 442
length of query: 411
length of database: 18,247,518
effective HSP length: 105
effective length of query: 306
effective length of database: 14,271,588
effective search space: 4367105928
effective search space used: 4367105928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.