Guide to the Human Genome
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Name: GTPBP6 Sequence: fasta or formatted (403aa) NCBI GI: 6912588
Description:

pseudoautosomal GTP-binding protein-like protein

Referenced in:

Additional Guanine Nucleotide-binding Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         36           2
 C cysteine            1.0          4           1
 D aspartate           4.7         19           1
 E glutamate           6.2         25           1
 F phenylalanine       3.2         13           1
 G glycine             6.0         24           1
 H histidine           3.2         13           1
 I isoleucine          3.7         15           2
 K lysine              5.5         22           2
 L leucine            12.4         50           2
 M methionine          2.0          8           1
 N asparagine          2.0          8           1
 P proline             4.2         17           1
 Q glutamine           4.0         16           2
 R arginine            8.2         33           2
 S serine              5.5         22           1
 T threonine           6.7         27           2
 V valine              9.9         40           2
 W tryptophan          1.0          4           1
 Y tyrosine            1.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pseudoautosomal GTP-binding protein-like protein [Hom... 
LOC100292716          0.282   PREDICTED: similar to pseudoautosomal GTP-binding p...
CLP1                  0.016   ATP/GTP-binding protein isoform 1 
ABCA3                 0.014   ATP-binding cassette, sub-family A member 3 
MTIF2                 0.013   mitochondrial translational initiation factor 2 prec...
MTIF2                 0.013   mitochondrial translational initiation factor 2 prec...
RHOT1                 0.010   ras homolog gene family, member T1 isoform 1 
RHOT1                 0.010   ras homolog gene family, member T1 isoform 2 
RHOT1                 0.010   ras homolog gene family, member T1 isoform 3 
LOC100133758          0.009   PREDICTED: hypothetical protein, partial 
SKP2                  0.009   S-phase kinase-associated protein 2 isoform 1 
SKP2                  0.009   S-phase kinase-associated protein 2 isoform 2 
MX2                   0.008   myxovirus resistance protein 2 
GTPBP10               0.007   GTP-binding protein 10 isoform 2 
GTPBP10               0.007   GTP-binding protein 10 isoform 1 
GOLGA6D               0.007   golgi autoantigen, golgin subfamily a, 6D 
MX1                   0.007   myxovirus resistance protein 1 
MX1                   0.007   myxovirus resistance protein 1 
GOLGA6C               0.007   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
ABCA9                 0.007   ATP-binding cassette, sub-family A, member 9 
GOLGA6B               0.007   golgi autoantigen, golgin subfamily a, 6B 
GOLGA6                0.007   golgi autoantigen, golgin subfamily a, 6 
DCTN1                 0.007   dynactin 1 isoform 4 
DCTN1                 0.007   dynactin 1 isoform 3 
ABCA8                 0.007   ATP-binding cassette, sub-family A member 8 
HDAC10                0.007   histone deacetylase 10 isoform 2 
HDAC10                0.007   histone deacetylase 10 isoform 1 
SEPT7                 0.007   cell division cycle 10 isoform 1 
SEPT7                 0.007   cell division cycle 10 isoform 2 
GTPBP5                0.007   GTP binding protein 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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