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Search of human proteins with 239757942
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo
sapiens]
(239 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo ... 489 e-139
gi|118498339 EMI domain containing 2 [Homo sapiens] 50 1e-06
gi|239756297 PREDICTED: hypothetical protein [Homo sapiens] 48 7e-06
gi|110832843 TBP-associated factor 4 [Homo sapiens] 47 1e-05
gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo ... 46 2e-05
gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo ... 46 2e-05
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 45 7e-05
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 45 7e-05
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 45 7e-05
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 45 7e-05
gi|122937321 UNC homeobox [Homo sapiens] 44 9e-05
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 44 1e-04
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239745228 PREDICTED: hypothetical protein XP_002343392 [Homo ... 44 2e-04
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 43 2e-04
gi|38373682 pleckstrin homology domain containing family G membe... 43 2e-04
gi|111154084 pleckstrin homology domain containing family G memb... 43 2e-04
gi|111154088 pleckstrin homology domain containing family G memb... 43 2e-04
gi|111154080 pleckstrin homology domain containing family G memb... 43 2e-04
gi|111154078 pleckstrin homology domain containing family G memb... 43 2e-04
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 43 3e-04
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ... 43 3e-04
gi|7710145 methyl-CpG binding domain protein 2 testis-specific i... 43 3e-04
gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo s... 43 3e-04
gi|119508426 alpha 3 type IX collagen [Homo sapiens] 43 3e-04
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 42 5e-04
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 42 5e-04
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 42 6e-04
>gi|239757942 PREDICTED: hypothetical protein XP_002346387 [Homo
sapiens]
Length = 239
Score = 489 bits (1260), Expect = e-139
Identities = 239/239 (100%), Positives = 239/239 (100%)
Query: 1 MALPGGRMACPGPLRLRRTSPLVLLGCPEKGSWVGPSPVLSSLMAGLSLRSPEVVGRVAS 60
MALPGGRMACPGPLRLRRTSPLVLLGCPEKGSWVGPSPVLSSLMAGLSLRSPEVVGRVAS
Sbjct: 1 MALPGGRMACPGPLRLRRTSPLVLLGCPEKGSWVGPSPVLSSLMAGLSLRSPEVVGRVAS 60
Query: 61 RARARTWEGGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGP 120
RARARTWEGGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGP
Sbjct: 61 RARARTWEGGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGP 120
Query: 121 AGRPSGRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPA 180
AGRPSGRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPA
Sbjct: 121 AGRPSGRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPA 180
Query: 181 PRVRAPPPPQRPAQLRLLAGLRPVVTSLGVTRRRGRGAGLSLTDLDARLCAEFLLSFKY 239
PRVRAPPPPQRPAQLRLLAGLRPVVTSLGVTRRRGRGAGLSLTDLDARLCAEFLLSFKY
Sbjct: 181 PRVRAPPPPQRPAQLRLLAGLRPVVTSLGVTRRRGRGAGLSLTDLDARLCAEFLLSFKY 239
>gi|118498339 EMI domain containing 2 [Homo sapiens]
Length = 439
Score = 50.4 bits (119), Expect = 1e-06
Identities = 53/164 (32%), Positives = 58/164 (35%), Gaps = 27/164 (16%)
Query: 61 RARARTWEGGKEGHAAVPQPATRSGRLGVWG--------GPLRHSWAPRPRQASQTRGGG 112
R R T G G P PA G G G GP P PR G
Sbjct: 191 RQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRP 250
Query: 113 GGPSLPGPAGRPSGRSRSRVGARGRLPSGGSHLPQPPRS-------LAAASAWQAVAREL 165
G P PGPAG P G P G + QPP LA+A +A
Sbjct: 251 GPPGPPGPAGNP--------GPSPNSPQGALYSLQPPTDKDNGDSRLASAIVDTVLA--- 299
Query: 166 GLSGPRPTEAPPFPAPRVRAPPPPQRPAQLRLLAGLRPVVTSLG 209
G+ GPR PP P P R PP P + LAG R V G
Sbjct: 300 GVPGPRGPPGPPGP-PGPRGPPGPPGTPGSQGLAGERGTVGPSG 342
Score = 37.7 bits (86), Expect = 0.009
Identities = 32/101 (31%), Positives = 38/101 (37%), Gaps = 16/101 (15%)
Query: 93 PLRHSWAPRPRQASQTRGGGGGPSLPGPAGRPSGR-SRSRVGARGRLPSGGSHLPQPPRS 151
PL H PR R+ + G G PGPAG P + R + G +G G P PR
Sbjct: 184 PLAHP-VPRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRG 242
Query: 152 LAAASAWQAVARELGLSGPRPTEAPPFPAPRVRAPPPPQRP 192
L E+G GP P P P P P P
Sbjct: 243 LPG---------EMGRPGP-----PGPPGPAGNPGPSPNSP 269
>gi|239756297 PREDICTED: hypothetical protein [Homo sapiens]
Length = 525
Score = 48.1 bits (113), Expect = 7e-06
Identities = 71/248 (28%), Positives = 89/248 (35%), Gaps = 51/248 (20%)
Query: 3 LPGGRMACPGPLRLRRTSPLVLLGCPEKGSWVGPSP------------VLSSLMAGLSLR 50
LPGGR + PL LG G V P +L+SL LS R
Sbjct: 213 LPGGRESS-------EAYPLPQLGAIGSGQAVAYGPFVLTQSSRPTDMLLNSLATSLSSR 265
Query: 51 SPE------VVGRVASRARARTWEGGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPR- 103
+ R R+R+ G G P P G G G P + P P+
Sbjct: 266 RMPSSCPMTIFMRCRIRSRSPPLLGSSLGCPRTPTPGLTEG--GGTGLPSKQRRGPSPKT 323
Query: 104 -----QASQTRGGGGGPSLPGPAGRPSGRSRSRVGAR-GRLPSG-GSHLPQPPRS-LAAA 155
Q S R GP PGP G P R R +G + GR+ + GS LP P RS LA
Sbjct: 324 ELGGPQGSLGRASLSGPFGPGPQGGPPSRDRRHLGVQIGRVRAPLGSALPYPARSELAPP 383
Query: 156 SAWQAVARE---------------LGLSGPRPTEAPPFPAPRVRAPPPPQRPAQLRLLAG 200
A A++ + GL P P A AP + +RP L
Sbjct: 384 GAQDALSPDPERPCPGTRGVRSGREGLLSPAPRSALGETAPTAQFTFRKRRPLHYLLPQP 443
Query: 201 LRPVVTSL 208
L+P T L
Sbjct: 444 LQPWYTIL 451
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 47.4 bits (111), Expect = 1e-05
Identities = 52/177 (29%), Positives = 65/177 (36%), Gaps = 22/177 (12%)
Query: 38 PVLSSLMAGLSLRSPEVVGRVASRARARTWEGGKEGHAAV--------PQPATRSGRLGV 89
P+ G +++P VG A A A AA P PAT + G
Sbjct: 227 PLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGH 286
Query: 90 WGGPLRHSWAPRPRQASQTRGGGGGPSLPGP-AGRPSGRS-RSRVGARGRLPSGGSHLPQ 147
GP + A P A+Q G G P P AG P+G S + GA P+ G
Sbjct: 287 PAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAES 346
Query: 148 PPRSLAAASAWQAVARELGLSGPR---------PTEAPPFPAPRVRAPPPPQRPAQL 195
P R + AA A+ L SGP PT P+P PP P P L
Sbjct: 347 PKRVVQAA---PPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGL 400
Score = 47.0 bits (110), Expect = 1e-05
Identities = 48/160 (30%), Positives = 56/160 (35%), Gaps = 25/160 (15%)
Query: 47 LSLRSPEVVGRVASRARARTWEGGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQAS 106
L+ R+PEV A G G A A G G AP P A
Sbjct: 43 LAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGA---------APEPPPAG 93
Query: 107 QTRGGGGGPSLPG---------PAGRPSGRSRSRVGARGRLPSGGSHLPQPPRSLAAASA 157
+ R GGGGP PG PAG ++ R G S GS P P + AA
Sbjct: 94 RARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEG---SAGSCAPVPAAAAVAAGP 150
Query: 158 WQAVARELGLSGPRPTEA----PPFPAPRVRAPPPPQRPA 193
A A +GP A P P P P P +PA
Sbjct: 151 EPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPA 190
Score = 39.7 bits (91), Expect = 0.002
Identities = 60/211 (28%), Positives = 75/211 (35%), Gaps = 49/211 (23%)
Query: 5 GGRMACPGPLRLRRTSPLVLLGCPEKGSWVGPSPVLSSLMAGLSLRSPEVVGRVASRARA 64
GG PGP RR PLV G + + P P S AG P A+ A A
Sbjct: 99 GGGPQRPGPPSPRR--PLVPAGPAPPAAKLRPPPEGS---AGSCAPVP------AAAAVA 147
Query: 65 RTWEGGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRP 124
E G A PA + R G GP G G GP PGP G+P
Sbjct: 148 AGPEPAPAGPAKPAGPAALAARAGPGPGP----------------GPGPGPG-PGP-GKP 189
Query: 125 SGRSRSRV--GARGRL----------------PSGGSHLPQP--PRSLAAASAWQAVARE 164
+G ++ G+ L P+ LP+P P ++ + A
Sbjct: 190 AGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAP 249
Query: 165 LGLSGPRPTEAPPFPAPRVRAPPPPQRPAQL 195
+ P P AP AP PPPP PA L
Sbjct: 250 PAPAAPSPPAAPAPAAPAAAPPPPPPAPATL 280
Score = 30.4 bits (67), Expect = 1.4
Identities = 54/201 (26%), Positives = 71/201 (35%), Gaps = 25/201 (12%)
Query: 4 PGGRMACPGP-LRLRRTSPLVLLGCPEKGSWVGPSPVLSSLMAGLSLRSPEVVGRVASRA 62
P G PGP +P V P++ P A +L + AS
Sbjct: 322 PAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPP-------AAQTLAASGPASTAASMV 374
Query: 63 RARTWEGGKEGHAAVPQPA--TRSGRLGVWGGPLRHSWAPRPRQASQTRGGGG------- 113
T +G AAVP PA T +G G + S + P + T G
Sbjct: 375 IGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTP--TATTSGIRATLTPTVL 432
Query: 114 GPSLPGPAGRPSGRSRSRVGARGRL--PSGGSHLPQPPRSLAAASAWQAVARELGLSGPR 171
P LP P P+ ++ L G L P ++LA A QA A+ PR
Sbjct: 433 APRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQA-QAHAQPQTTMAPR 491
Query: 172 P---TEAPPFPAPRVRAPPPP 189
P T APP V+AP P
Sbjct: 492 PATPTSAPPVQISTVQAPGTP 512
>gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo
sapiens]
Length = 492
Score = 46.2 bits (108), Expect = 2e-05
Identities = 66/207 (31%), Positives = 76/207 (36%), Gaps = 33/207 (15%)
Query: 36 PSPVLSSLMAGLSLRSPEVVGRVASRARARTWEGGKEGHAAVPQPATRSGRLGVWGGPLR 95
PSP SL+A S G A R GGK G R G+ G P
Sbjct: 296 PSPP-RSLVAPSESGSAGRRGGTNGVATPREKLGGKRG-------VGRKGQGTRLGAP-- 345
Query: 96 HSWAPRPR-QASQTRGGGGGPSLPGPAGRPSGRSRSRVGARGRLPSGGSHLPQPPRS-LA 153
HS P P + + GGGGG AGR R R R + P PP L
Sbjct: 346 HSLPPPPPFRTGRGEGGGGGSRADVTAGRARPRRRRWEPLRAQRSGARPGAPAPPLPCLP 405
Query: 154 AASAWQAVAR--------ELGLS-GPR---------PTEAPPFPAPRVRAPPPPQRPAQL 195
A+ A+A ELGLS G R PT APP P PR P P
Sbjct: 406 PAAVCHALAGAGAPGGRLELGLSPGTRLIRGGGAAVPTAAPPAPLPRWGPGPLPGPTGLF 465
Query: 196 RLLAGLRPVVTSLGVT---RRRGRGAG 219
L G+ +SLG T + G G G
Sbjct: 466 DLSVGVSAASSSLGSTELEKNMGSGGG 492
Score = 28.1 bits (61), Expect = 7.0
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 14/61 (22%)
Query: 145 LPQPPRSLAAASAWQAVARELGLSG--------------PRPTEAPPFPAPRVRAPPPPQ 190
LP PPRSL A S + R G +G R + AP PPPP
Sbjct: 295 LPSPPRSLVAPSESGSAGRRGGTNGVATPREKLGGKRGVGRKGQGTRLGAPHSLPPPPPF 354
Query: 191 R 191
R
Sbjct: 355 R 355
>gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo
sapiens]
Length = 492
Score = 46.2 bits (108), Expect = 2e-05
Identities = 66/207 (31%), Positives = 76/207 (36%), Gaps = 33/207 (15%)
Query: 36 PSPVLSSLMAGLSLRSPEVVGRVASRARARTWEGGKEGHAAVPQPATRSGRLGVWGGPLR 95
PSP SL+A S G A R GGK G R G+ G P
Sbjct: 296 PSPP-RSLVAPSESGSAGRRGGTNGVATPREKLGGKRG-------VGRKGQGTRLGAP-- 345
Query: 96 HSWAPRPR-QASQTRGGGGGPSLPGPAGRPSGRSRSRVGARGRLPSGGSHLPQPPRS-LA 153
HS P P + + GGGGG AGR R R R + P PP L
Sbjct: 346 HSLPPPPPFRTGRGEGGGGGSRADVTAGRARPRRRRWEPLRAQRSGARPGAPAPPLPCLP 405
Query: 154 AASAWQAVAR--------ELGLS-GPR---------PTEAPPFPAPRVRAPPPPQRPAQL 195
A+ A+A ELGLS G R PT APP P PR P P
Sbjct: 406 PAAVCHALAGAGAPGGRLELGLSPGTRLIRGGGAAVPTAAPPAPLPRWGPGPLPGPTGLF 465
Query: 196 RLLAGLRPVVTSLGVT---RRRGRGAG 219
L G+ +SLG T + G G G
Sbjct: 466 DLSVGVSAASSSLGSTELEKNMGSGGG 492
Score = 28.1 bits (61), Expect = 7.0
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 14/61 (22%)
Query: 145 LPQPPRSLAAASAWQAVARELGLSG--------------PRPTEAPPFPAPRVRAPPPPQ 190
LP PPRSL A S + R G +G R + AP PPPP
Sbjct: 295 LPSPPRSLVAPSESGSAGRRGGTNGVATPREKLGGKRGVGRKGQGTRLGAPHSLPPPPPF 354
Query: 191 R 191
R
Sbjct: 355 R 355
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 44.7 bits (104), Expect = 7e-05
Identities = 59/190 (31%), Positives = 77/190 (40%), Gaps = 22/190 (11%)
Query: 37 SPVLSSLMAGLSLRSPEVVGRVASRARARTWEGGKEGHAAVPQPATRS-----GRLGVWG 91
SP+L+ L G RSP+ + AR G E H P P++RS G+LG
Sbjct: 923 SPLLTPLQPGA--RSPQAAQPSPAPPGARGGLGLPE-HFLPPPPSSRSPSSSPGQLGQPP 979
Query: 92 GPLRHSWAPRPRQASQTRGGGGGPSLPGP----AGRPSGRSRSRVGARGRLPSGGSHLPQ 147
G L A P +T P P P AG G S RG L G H P
Sbjct: 980 GELSLGLATGPLSTPETP-----PRQPEPPSLVAGASGGASPVGFTPRGGLSPPG-HSPG 1033
Query: 148 PPRSLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRAPPP--PQRPAQ-LRLLAGLRPV 204
PPR+ +A +A L P + PP P+ R PP P R Q L+L++ +P
Sbjct: 1034 PPRTFPSAPP-RASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPA 1092
Query: 205 VTSLGVTRRR 214
+ G R
Sbjct: 1093 LPQDGAQTLR 1102
Score = 30.0 bits (66), Expect = 1.8
Identities = 29/78 (37%), Positives = 30/78 (38%), Gaps = 10/78 (12%)
Query: 110 GGGGGPSLPGPAGRPSGRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSG 169
GG G GP GRP G + R S GS LP PP SL A A SG
Sbjct: 1127 GGSGSSGGLGPPGRPYGAIPGQHVTLPRKTSSGS-LP-PPLSLFGARATS--------SG 1176
Query: 170 PRPTEAPPFPAPRVRAPP 187
P A P P R P
Sbjct: 1177 GPPLTAGPQREPGARPEP 1194
Score = 28.9 bits (63), Expect = 4.1
Identities = 40/141 (28%), Positives = 47/141 (33%), Gaps = 18/141 (12%)
Query: 71 KEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRG---------GGGGPSLPGPA 121
+EG P+ RS RL P + A S G G G S G
Sbjct: 34 EEGAGGRQDPSRRSIRLRPLPSPSPSAAAGGTESRSSALGAADSEGPARGAGKSSTNGDC 93
Query: 122 GRPSGRSRS---RVGARGRLPSGGSH-----LPQPPRSLAAASAWQAVARELGLSGPRPT 173
R G S R G G SG SH + R +A A R P
Sbjct: 94 RRFRGSLASLGSRGGGSGGTGSGSSHGHLHDSAEERRLIAEGDASPGEDRTPPGLAAEP- 152
Query: 174 EAPPFPAPRVRAPPPPQRPAQ 194
E P A +PPPPQ+P Q
Sbjct: 153 ERPGASAQPAASPPPPQQPPQ 173
Score = 28.9 bits (63), Expect = 4.1
Identities = 36/127 (28%), Positives = 49/127 (38%), Gaps = 19/127 (14%)
Query: 91 GGPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRPSGRSRSRVGARGRLPSGGSHLPQPPR 150
GG L S +P + + G P P+ P G ARG L LP PP
Sbjct: 915 GGSLSSSDSPL---LTPLQPGARSPQAAQPSPAPPG-------ARGGLGLPEHFLPPPPS 964
Query: 151 SLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRAPP--PPQRPAQLRLLAGLRPVVTSL 208
S + +S+ G G P E A + P PP++P L+AG + +
Sbjct: 965 SRSPSSS-------PGQLGQPPGELSLGLATGPLSTPETPPRQPEPPSLVAGASGGASPV 1017
Query: 209 GVTRRRG 215
G T R G
Sbjct: 1018 GFTPRGG 1024
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 44.7 bits (104), Expect = 7e-05
Identities = 64/221 (28%), Positives = 73/221 (33%), Gaps = 30/221 (13%)
Query: 11 PGPLRLRRTSPLVLLGCPEKGSWVGPSPVLSSLMAGLSLRSPEVVGRVASRARARTWEGG 70
PGP L R S G P G G G R+P +GR A +RAR G
Sbjct: 246 PGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWG 305
Query: 71 KEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPR--QASQTRGGG----GGPSLPGPAGRP 124
G A V R G P R R + + RGGG G + GPA P
Sbjct: 306 LSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRRRGGGGEGEGTHATHGPASPP 365
Query: 125 SGRSRSRVGA------RGRLPSGGSHLPQPPRSLAAA-----------SAWQAVA---RE 164
R VGA G G L PPR + A S W + R
Sbjct: 366 GRRHDEEVGAAVLRAGSGEGSRRGLQLTPPPRRVHGALQRFGGGRNLKSNWMSTTRTPRR 425
Query: 165 LGLSGPRPTEAPPFPAPRVRAPPPPQRPAQLRLLAGLRPVV 205
G SGP+ R PP RL G R VV
Sbjct: 426 SGASGPKMVADQTSGISR----PPTAGIGTSRLCLGDRQVV 462
Score = 30.4 bits (67), Expect = 1.4
Identities = 31/95 (32%), Positives = 38/95 (40%), Gaps = 15/95 (15%)
Query: 56 GRVASRARARTWEGGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQ-------- 107
G A AR R G EG + P+ +R+ R GP S A R R A +
Sbjct: 212 GPTAPPARVRE-PGRAEGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGG 270
Query: 108 ------TRGGGGGPSLPGPAGRPSGRSRSRVGARG 136
GGGG PG GR + SR+R A G
Sbjct: 271 EKAAAPRAPGGGGGRNPGALGRAAPPSRARQDAWG 305
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 44.7 bits (104), Expect = 7e-05
Identities = 54/175 (30%), Positives = 63/175 (36%), Gaps = 25/175 (14%)
Query: 23 VLLGCPEKGSWVGPSPVLSSLMAGLSLRSPEVVGRVASRARARTWEGGKEGHAAVPQPAT 82
V +G E G + P P L ++AGL P R R + A QP
Sbjct: 23 VRVGVGEPGGFCLPGPAL--VVAGLDGIRPAPAAAHPPAPRERP-AAARLSALAAAQPRR 79
Query: 83 RS-GRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRPSGRSRSRVGARGRLPSG 141
RS G G GG + P A Q RG P+ P P P+ S R LPSG
Sbjct: 80 RSPGPQGGGGGDIASPLPP----ALQPRGAPAVPAAPSPGPLPARPSSPP--PRPSLPSG 133
Query: 142 GSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRAPPPPQRPAQLR 196
PP +LAA PRP A P P V A QRP R
Sbjct: 134 PHRPVLPPSALAA---------------PRPPLARPLPQGSVTAREQEQRPRSRR 173
Score = 29.6 bits (65), Expect = 2.4
Identities = 30/106 (28%), Positives = 39/106 (36%), Gaps = 19/106 (17%)
Query: 103 RQASQTRGGGGGPSLPGPAGRPS-----GRSRSRVGARGRLPSGGSHLPQPPRSLAAASA 157
R + RGGG G + G P G + G G P+ + P PR AA+
Sbjct: 9 RFGAAVRGGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAAR 68
Query: 158 WQAVA------RELG--------LSGPRPTEAPPFPAPRVRAPPPP 189
A+A R G ++ P P P AP V A P P
Sbjct: 69 LSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSP 114
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 44.7 bits (104), Expect = 7e-05
Identities = 54/175 (30%), Positives = 63/175 (36%), Gaps = 25/175 (14%)
Query: 23 VLLGCPEKGSWVGPSPVLSSLMAGLSLRSPEVVGRVASRARARTWEGGKEGHAAVPQPAT 82
V +G E G + P P L ++AGL P R R + A QP
Sbjct: 23 VRVGVGEPGGFCLPGPAL--VVAGLDGIRPAPAAAHPPAPRERP-AAARLSALAAAQPRR 79
Query: 83 RS-GRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRPSGRSRSRVGARGRLPSG 141
RS G G GG + P A Q RG P+ P P P+ S R LPSG
Sbjct: 80 RSPGPQGGGGGDIASPLPP----ALQPRGAPAVPAAPSPGPLPARPSSPP--PRPSLPSG 133
Query: 142 GSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRAPPPPQRPAQLR 196
PP +LAA PRP A P P V A QRP R
Sbjct: 134 PHRPVLPPSALAA---------------PRPPLARPLPQGSVTAREQEQRPRSRR 173
Score = 29.6 bits (65), Expect = 2.4
Identities = 30/106 (28%), Positives = 39/106 (36%), Gaps = 19/106 (17%)
Query: 103 RQASQTRGGGGGPSLPGPAGRPS-----GRSRSRVGARGRLPSGGSHLPQPPRSLAAASA 157
R + RGGG G + G P G + G G P+ + P PR AA+
Sbjct: 9 RFGAAVRGGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAAR 68
Query: 158 WQAVA------RELG--------LSGPRPTEAPPFPAPRVRAPPPP 189
A+A R G ++ P P P AP V A P P
Sbjct: 69 LSALAAAQPRRRSPGPQGGGGGDIASPLPPALQPRGAPAVPAAPSP 114
>gi|122937321 UNC homeobox [Homo sapiens]
Length = 531
Score = 44.3 bits (103), Expect = 9e-05
Identities = 37/120 (30%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Query: 77 VPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRPSGRSRSRVGARG 136
VPQ A + G G+ P AP A + G S GP G P R
Sbjct: 391 VPQAALKGGA-GLEPAPKDAPPAPAVPPAPPAQASFGAFS--GPGGAPDSAFARRSPDAV 447
Query: 137 RLPSGGSHLPQPPRSLAAASAWQAVA---RELGLSGPRPTEAPPFPAPRVRAPPPPQRPA 193
P + P P R LA+A+A + + G +GP P P P P R P P + PA
Sbjct: 448 ASPGAPAPAPAPFRDLASAAATEGGGGDCADAGTAGPAPPPPAPSPRPGPRPPSPAEEPA 507
>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 43.9 bits (102), Expect = 1e-04
Identities = 47/162 (29%), Positives = 59/162 (36%), Gaps = 24/162 (14%)
Query: 57 RVASRARARTWEGGKEGHAAVPQPATRSGRLGVWGG-PLRHSWAPRPRQ------ASQTR 109
+VA+R R WEGG G A R G G P R + RP+Q A ++R
Sbjct: 104 QVAARGGGRGWEGGGLGARRAVTAARRGGASRPLAGEPWREAARRRPQQCPQWGRARESR 163
Query: 110 GGG-------GGPSLPGPAGRPSGRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVA 162
P+ P + P R++ R R R GG +PPR
Sbjct: 164 SAALASPRVSNAPTTPA-SRNPGLRAQERQSGR-RAAGGGGARAEPPRV--------PPC 213
Query: 163 RELGLSGPRPTEAPPFPAPRVRAPPPPQRPAQLRLLAGLRPV 204
R G SG + PR PP RP AGLR V
Sbjct: 214 RPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAPAAGLRSV 255
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 43.9 bits (102), Expect = 1e-04
Identities = 43/142 (30%), Positives = 55/142 (38%), Gaps = 10/142 (7%)
Query: 85 GRLGVWGGPLRHSWAPRPRQASQTRGG---GGGPSLPGPAGRPSGRSRSRVGARGRLPSG 141
G G +GG R + + R + RG GGG P P GR+ S + G S
Sbjct: 1037 GFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTGGPNHPPAPRGRTASETRSEG---SE 1093
Query: 142 GSHLPQPPRSLAAASAWQAVARELGLS---GPRPTEAPPFPAPRVRAPP-PPQRPAQLRL 197
+P+ R + + + +L S P P E P PP P PA R
Sbjct: 1094 YEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPKEGTLTQVPLAPPPPGAPPSPAPARF 1153
Query: 198 LAGLRPVVTSLGVTRRRGRGAG 219
A V T GV RRGRG G
Sbjct: 1154 TARGGRVFTPRGVPSRRGRGGG 1175
Score = 32.7 bits (73), Expect = 0.29
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 18/108 (16%)
Query: 104 QASQTRGGGGGPSLPGPAGRPSGRSRSRVGARGRLPSGGSHLPQPP-------------- 149
+A T GGGGG ++PG S SR + R + S S Q P
Sbjct: 1349 KAVGTPGGGGGGAVPGI----SAMSRGDLSQRAKDLSKRSFSSQRPGMERQNRRPGPGGK 1404
Query: 150 RSLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRAPPPPQRPAQLRL 197
+ +S+ G +GP + +P+P+ R+ PP +RP L L
Sbjct: 1405 AGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPL 1452
Score = 31.6 bits (70), Expect = 0.64
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 22/82 (26%)
Query: 125 SGRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTE---------- 174
+G R ARG + SGG P P R + W GPRP
Sbjct: 894 TGPEAGRKPARG-VGSGGQGPPPPRRESRTETRW----------GPRPGSSRRGIPPEEP 942
Query: 175 -APPFPAPRVRAPPPPQRPAQL 195
APP A ++ PPPP + +L
Sbjct: 943 GAPPRRAGPIKKPPPPTKVEEL 964
Score = 29.6 bits (65), Expect = 2.4
Identities = 37/155 (23%), Positives = 48/155 (30%), Gaps = 31/155 (20%)
Query: 35 GPSPVLSSLMAGLSLRSPEVVGRVASRARARTWEGGKEGHAAVPQPATRSGRLGVWGGPL 94
GP P S G +P + R+ H A + + R + W PL
Sbjct: 1591 GPGPQAESRDTGTEALTPHIWNRL---------------HTATSRKSYRPSSMEPWMEPL 1635
Query: 95 RHSWAPRPRQASQTRGGGGGPSLPGPAGRPSGRSRSRVGARGRLPSGGSHLPQPPRSLAA 154
+ SQ+ G L G + SG R G L PP+
Sbjct: 1636 SPFEDVAGTEMSQS---DSGVDLSGDSQVSSGPCSQRSSPDGGLKGAAEG---PPKRPGG 1689
Query: 155 ASAWQAVARELGLSGPRPTEAPPFPAPRVRAPPPP 189
+S AV P E PP P R PP P
Sbjct: 1690 SSPLNAV----------PCEGPPGSEPPRRPPPAP 1714
Score = 28.9 bits (63), Expect = 4.1
Identities = 29/95 (30%), Positives = 37/95 (38%), Gaps = 12/95 (12%)
Query: 109 RGGGGGPSLPGPAGRPSGRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLS 168
RG G G P P R S R+ +R G R G S PP A ++
Sbjct: 904 RGVGSGGQGPPPPRRES-RTETRWGPR----PGSSRRGIPPEEPGAPPRRAGPIKK---- 954
Query: 169 GPRPT---EAPPFPAPRVRAPPPPQRPAQLRLLAG 200
P PT E PP P + P P +P L++ G
Sbjct: 955 PPPPTKVEELPPKPLEQGDETPKPPKPDPLKITKG 989
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 43.5 bits (101), Expect = 2e-04
Identities = 43/126 (34%), Positives = 47/126 (37%), Gaps = 33/126 (26%)
Query: 57 RVASRARARTWEGGKEGHAAVP-------QPATRSGRLGVWGGPLRHSWAPRPRQASQTR 109
R SRAR W G + AA P PA + GGP S RP
Sbjct: 96 RRTSRARTALW-GRRSRRAAGPGLDCAGSAPAPSGAQS--CGGPAPASALRRPLTQWDAS 152
Query: 110 GGGGGPSLPGP-AGRPSGRSRSRVGARGRLPS----------------------GGSHLP 146
GGGG S GP AG P G SR GAR + P GGS P
Sbjct: 153 GGGGRASHSGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTP 212
Query: 147 QPPRSL 152
PPR+L
Sbjct: 213 PPPRAL 218
Score = 35.8 bits (81), Expect = 0.034
Identities = 62/214 (28%), Positives = 77/214 (35%), Gaps = 53/214 (24%)
Query: 27 CPEKGSWVGPSPVLSSLMAGLSLRSPEVVGRVASRARARTWEGGKEGHAAVPQ-----PA 81
CP GS + PS VL+ G V +RAR GH V + P+
Sbjct: 240 CP--GSTLPPSSVLA--------------GCVGTRAR---------GHGGVQRQRFSAPS 274
Query: 82 TRSGRLGVWGGPLR-HSWAPRPRQAS---QTRGGGGGPSLPG--PAGRPSGRSRSRVGAR 135
+ S P R P PR ++ + RGGGGG L +GR SG + S VG
Sbjct: 275 SHSTGARTLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGRGSGVTHS-VGTH 333
Query: 136 GRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRAP--------- 186
GS P+P + V LS P P P P+ R P
Sbjct: 334 ALATRRGSRAPRP------VGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGRLSC 387
Query: 187 PPPQRPAQLRLLAGLRP-VVTSLGVTRRRGRGAG 219
P R A L +A L P G R G G G
Sbjct: 388 PQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGG 421
>gi|239745228 PREDICTED: hypothetical protein XP_002343392 [Homo
sapiens]
Length = 488
Score = 43.5 bits (101), Expect = 2e-04
Identities = 57/188 (30%), Positives = 69/188 (36%), Gaps = 40/188 (21%)
Query: 69 GGKEGHAAVPQPATRSGRLGVWGG-----PLRHSWAPRPR------QASQTRGGGGGPSL 117
G H P P+ R+ G+ G P + P P+ Q S R GP
Sbjct: 255 GAPNVHRLPPPPSLRTPTPGLTEGGGTGLPSKQRRGPSPKTELGGPQGSLGRASLSGPFG 314
Query: 118 PGPAGRPSGRSRSRVG---ARGRLPSGGSHLPQPPRS-LAAASAWQAVARE--------- 164
PGP G P R R +G R R+P GS LP P RS LA A A++ +
Sbjct: 315 PGPQGGPPSRDRRHLGVQIGRVRVPL-GSALPYPARSELAPPGARDALSPDPERPCPGTR 373
Query: 165 ------LGLSGPRPTEAPPFPAP-------RVRAPPPPQRPAQLRLLAGLRPVVTSLGVT 211
GL P P A AP +VR PP P+ A AG R
Sbjct: 374 GVRSGREGLLSPAPRSALGETAPTAQFTFRKVRNPPGPRGGAM--SAAGTRSPPGPAESA 431
Query: 212 RRRGRGAG 219
R RG G
Sbjct: 432 RSRGPRPG 439
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 43.1 bits (100), Expect = 2e-04
Identities = 43/126 (34%), Positives = 47/126 (37%), Gaps = 33/126 (26%)
Query: 57 RVASRARARTWEGGKEGHAAVP-------QPATRSGRLGVWGGPLRHSWAPRPRQASQTR 109
R SRAR W G + AA P PA + GGP S RP
Sbjct: 96 RRTSRARTALW-GRRSRRAAGPGLDCAGSAPAPSGAQS--CGGPAPASALRRPLTQWDAS 152
Query: 110 GGGGGPSLPGP-AGRPSGRSRSRVGARGRLPS----------------------GGSHLP 146
GGGG S GP AG P G SR GAR + P GGS P
Sbjct: 153 GGGGRGSHSGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTP 212
Query: 147 QPPRSL 152
PPR+L
Sbjct: 213 PPPRAL 218
Score = 37.7 bits (86), Expect = 0.009
Identities = 49/163 (30%), Positives = 57/163 (34%), Gaps = 28/163 (17%)
Query: 69 GGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPG--PAGRPSG 126
GG G +P P+ G P AP R RGGGGG L +GR SG
Sbjct: 373 GGSSGARTLPTPSRARP-----GKPAPRGSAPPAR----LRGGGGGSGLTQLVGSGRGSG 423
Query: 127 RSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRAP 186
+ S VG GS P+P + V LS P P P P+ R P
Sbjct: 424 VTHS-VGTHALATRRGSRAPRP------VGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGP 476
Query: 187 ---------PPPQRPAQLRLLAGLRP-VVTSLGVTRRRGRGAG 219
P R A L +A L P G R G G G
Sbjct: 477 RLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGG 519
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 43.1 bits (100), Expect = 2e-04
Identities = 43/126 (34%), Positives = 47/126 (37%), Gaps = 33/126 (26%)
Query: 57 RVASRARARTWEGGKEGHAAVP-------QPATRSGRLGVWGGPLRHSWAPRPRQASQTR 109
R SRAR W G + AA P PA + GGP S RP
Sbjct: 96 RRTSRARTALW-GRRSRRAAGPGLDCAGSAPAPSGAQS--CGGPAPASALRRPLTQWDAS 152
Query: 110 GGGGGPSLPGP-AGRPSGRSRSRVGARGRLPS----------------------GGSHLP 146
GGGG S GP AG P G SR GAR + P GGS P
Sbjct: 153 GGGGRGSHSGPRAGTPGGGRSSRAGARRKTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTP 212
Query: 147 QPPRSL 152
PPR+L
Sbjct: 213 PPPRAL 218
Score = 37.7 bits (86), Expect = 0.009
Identities = 49/163 (30%), Positives = 57/163 (34%), Gaps = 28/163 (17%)
Query: 69 GGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPG--PAGRPSG 126
GG G +P P+ G P AP R RGGGGG L +GR SG
Sbjct: 373 GGSSGARTLPTPSRARP-----GKPAPRGSAPPAR----LRGGGGGSGLTQLVGSGRGSG 423
Query: 127 RSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRAP 186
+ S VG GS P+P + V LS P P P P+ R P
Sbjct: 424 VTHS-VGTHALATRRGSRAPRP------VGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGP 476
Query: 187 ---------PPPQRPAQLRLLAGLRP-VVTSLGVTRRRGRGAG 219
P R A L +A L P G R G G G
Sbjct: 477 RLGAGRLSCPQAPRAAALPGIAVLAPSPAHDWGGQRCEGCGGG 519
>gi|38373682 pleckstrin homology domain containing family G member 5
isoform a [Homo sapiens]
Length = 1006
Score = 43.1 bits (100), Expect = 2e-04
Identities = 52/152 (34%), Positives = 61/152 (40%), Gaps = 35/152 (23%)
Query: 11 PGPLRLRRTSPLVLLGCPEKGSWVGPSPVLSSLMAGLSLR-SPEVVGRVASRARARTWEG 69
P P RLRR +P+ LL CP L L+AG +P R S
Sbjct: 854 PSP-RLRRRTPVQLLSCPPHLLKSKSEASLLQLLAGAGTHGTPSAPSRSLS--------- 903
Query: 70 GKEGHAAVPQPATRSGRLGVWGGPLRHSW----APRPRQASQTRGGGGGPSLPG-PAGRP 124
E AVP P R+ GP SW AP P G GP L G AG P
Sbjct: 904 --ELCLAVPAPGIRTQGSPQEAGP---SWDCRGAPSP---------GSGPGLVGCLAGEP 949
Query: 125 SGRSRSRVGARGRLPSGGSH--LPQPPRSLAA 154
+G R R G LPSG S P+PP ++A
Sbjct: 950 AGSHRKRC---GDLPSGASPRVQPEPPPGVSA 978
>gi|111154084 pleckstrin homology domain containing family G member 5
isoform b [Homo sapiens]
Length = 1083
Score = 43.1 bits (100), Expect = 2e-04
Identities = 52/152 (34%), Positives = 61/152 (40%), Gaps = 35/152 (23%)
Query: 11 PGPLRLRRTSPLVLLGCPEKGSWVGPSPVLSSLMAGLSLR-SPEVVGRVASRARARTWEG 69
P P RLRR +P+ LL CP L L+AG +P R S
Sbjct: 931 PSP-RLRRRTPVQLLSCPPHLLKSKSEASLLQLLAGAGTHGTPSAPSRSLS--------- 980
Query: 70 GKEGHAAVPQPATRSGRLGVWGGPLRHSW----APRPRQASQTRGGGGGPSLPG-PAGRP 124
E AVP P R+ GP SW AP P G GP L G AG P
Sbjct: 981 --ELCLAVPAPGIRTQGSPQEAGP---SWDCRGAPSP---------GSGPGLVGCLAGEP 1026
Query: 125 SGRSRSRVGARGRLPSGGSH--LPQPPRSLAA 154
+G R R G LPSG S P+PP ++A
Sbjct: 1027 AGSHRKRC---GDLPSGASPRVQPEPPPGVSA 1055
>gi|111154088 pleckstrin homology domain containing family G member
5 isoform a [Homo sapiens]
Length = 1006
Score = 43.1 bits (100), Expect = 2e-04
Identities = 52/152 (34%), Positives = 61/152 (40%), Gaps = 35/152 (23%)
Query: 11 PGPLRLRRTSPLVLLGCPEKGSWVGPSPVLSSLMAGLSLR-SPEVVGRVASRARARTWEG 69
P P RLRR +P+ LL CP L L+AG +P R S
Sbjct: 854 PSP-RLRRRTPVQLLSCPPHLLKSKSEASLLQLLAGAGTHGTPSAPSRSLS--------- 903
Query: 70 GKEGHAAVPQPATRSGRLGVWGGPLRHSW----APRPRQASQTRGGGGGPSLPG-PAGRP 124
E AVP P R+ GP SW AP P G GP L G AG P
Sbjct: 904 --ELCLAVPAPGIRTQGSPQEAGP---SWDCRGAPSP---------GSGPGLVGCLAGEP 949
Query: 125 SGRSRSRVGARGRLPSGGSH--LPQPPRSLAA 154
+G R R G LPSG S P+PP ++A
Sbjct: 950 AGSHRKRC---GDLPSGASPRVQPEPPPGVSA 978
>gi|111154080 pleckstrin homology domain containing family G member
5 isoform a [Homo sapiens]
Length = 1006
Score = 43.1 bits (100), Expect = 2e-04
Identities = 52/152 (34%), Positives = 61/152 (40%), Gaps = 35/152 (23%)
Query: 11 PGPLRLRRTSPLVLLGCPEKGSWVGPSPVLSSLMAGLSLR-SPEVVGRVASRARARTWEG 69
P P RLRR +P+ LL CP L L+AG +P R S
Sbjct: 854 PSP-RLRRRTPVQLLSCPPHLLKSKSEASLLQLLAGAGTHGTPSAPSRSLS--------- 903
Query: 70 GKEGHAAVPQPATRSGRLGVWGGPLRHSW----APRPRQASQTRGGGGGPSLPG-PAGRP 124
E AVP P R+ GP SW AP P G GP L G AG P
Sbjct: 904 --ELCLAVPAPGIRTQGSPQEAGP---SWDCRGAPSP---------GSGPGLVGCLAGEP 949
Query: 125 SGRSRSRVGARGRLPSGGSH--LPQPPRSLAA 154
+G R R G LPSG S P+PP ++A
Sbjct: 950 AGSHRKRC---GDLPSGASPRVQPEPPPGVSA 978
>gi|111154078 pleckstrin homology domain containing family G member 5
isoform c [Homo sapiens]
Length = 1062
Score = 43.1 bits (100), Expect = 2e-04
Identities = 52/152 (34%), Positives = 61/152 (40%), Gaps = 35/152 (23%)
Query: 11 PGPLRLRRTSPLVLLGCPEKGSWVGPSPVLSSLMAGLSLR-SPEVVGRVASRARARTWEG 69
P P RLRR +P+ LL CP L L+AG +P R S
Sbjct: 910 PSP-RLRRRTPVQLLSCPPHLLKSKSEASLLQLLAGAGTHGTPSAPSRSLS--------- 959
Query: 70 GKEGHAAVPQPATRSGRLGVWGGPLRHSW----APRPRQASQTRGGGGGPSLPG-PAGRP 124
E AVP P R+ GP SW AP P G GP L G AG P
Sbjct: 960 --ELCLAVPAPGIRTQGSPQEAGP---SWDCRGAPSP---------GSGPGLVGCLAGEP 1005
Query: 125 SGRSRSRVGARGRLPSGGSH--LPQPPRSLAA 154
+G R R G LPSG S P+PP ++A
Sbjct: 1006 AGSHRKRC---GDLPSGASPRVQPEPPPGVSA 1034
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 42.7 bits (99), Expect = 3e-04
Identities = 42/132 (31%), Positives = 52/132 (39%), Gaps = 25/132 (18%)
Query: 62 ARARTWEGGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGPA 121
A+ + G +G A P PA +G GP+ + AP + A + G G PG A
Sbjct: 825 AKGEPGDAGAKGDAGPPGPAGPAGP----PGPIGNVGAPGAKGARGSAGPPGATGFPGAA 880
Query: 122 GRPSGRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPAP 181
GR VG G PSG + P PP A + G GPR E P P
Sbjct: 881 GR--------VGPPG--PSGNAGPPGPP----------GPAGKEGGKGPR-GETGPAGRP 919
Query: 182 RVRAPPPPQRPA 193
PP P PA
Sbjct: 920 GEVGPPGPPGPA 931
Score = 38.5 bits (88), Expect = 0.005
Identities = 39/127 (30%), Positives = 46/127 (36%), Gaps = 7/127 (5%)
Query: 68 EGGKEGHAAVPQPATRSGRLGVWG--GPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRPS 125
E G G P PA G+ G G GP P R +RG G + GP G P+
Sbjct: 450 EPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKG-PA 508
Query: 126 GRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRA 185
G R G G P G P A + + G GP PP PA +
Sbjct: 509 GE-RGSPGPAG--PKGSPGEAGRPGEAGLPGA-KGLTGSPGSPGPDGKTGPPGPAGQDGR 564
Query: 186 PPPPQRP 192
P PP P
Sbjct: 565 PGPPGPP 571
Score = 37.4 bits (85), Expect = 0.012
Identities = 39/136 (28%), Positives = 48/136 (35%), Gaps = 16/136 (11%)
Query: 70 GKEGHAAVPQPATRSGRLGVWG-----GPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRP 124
G +G +P A G G G G + P+ + G G P GP G P
Sbjct: 248 GPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLP 307
Query: 125 SGRSR----SRVGARGRLPSGGSHLPQPPRSLAAASAWQAVA---RELGLSGPRPTEAPP 177
R R GARG + G+ P P A + E G GPR +E P
Sbjct: 308 GERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGP- 366
Query: 178 FPAPRVRAPPPPQRPA 193
VR P P PA
Sbjct: 367 ---QGVRGEPGPPGPA 379
Score = 37.4 bits (85), Expect = 0.012
Identities = 34/119 (28%), Positives = 43/119 (36%), Gaps = 22/119 (18%)
Query: 70 GKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRPSGRSR 129
G G A P A G G+ G P +P P + G G PGP G P R +
Sbjct: 521 GSPGEAGRPGEAGLPGAKGLTGSP----GSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQ 576
Query: 130 SRV-------GARGRLPSGGSH-LPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPA 180
+ V GA G G +P PP ++ A G G + PP PA
Sbjct: 577 AGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPA----------GKDGEAGAQGPPGPA 625
Score = 37.0 bits (84), Expect = 0.015
Identities = 45/162 (27%), Positives = 55/162 (33%), Gaps = 24/162 (14%)
Query: 52 PEVVGRV-ASRARARTWEGGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRG 110
P +G V A A+ G G P A R G GP ++ P P + G
Sbjct: 850 PGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGP----PGPSGNAGPPGPPGPAGKEG 905
Query: 111 GGGGPSLPGPAGRPS----------GRSRSRVGARGRLPSGGSHLPQP-----PRSLAAA 155
G G GPAGRP + GA G P+G P P R +
Sbjct: 906 GKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADG--PAGAPGTPGPQGIAGQRGVVGL 963
Query: 156 SAWQAVARELGLSGP--RPTEAPPFPAPRVRAPPPPQRPAQL 195
+ GL GP P + P A R PP P P L
Sbjct: 964 PGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGL 1005
Score = 35.4 bits (80), Expect = 0.044
Identities = 37/130 (28%), Positives = 48/130 (36%), Gaps = 16/130 (12%)
Query: 70 GKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRPSGRSR 129
G +G P P SG G AP + + +G G + GP G P+G
Sbjct: 419 GPQGPGGPPGPKGNSGEPG----------APGSKGDTGAKGEPGPVGVQGPPG-PAGEEG 467
Query: 130 SRVGARGRLPSGGSHLPQPP--RSLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRAPP 187
R GARG G + LP PP R + + G GP P PA +P
Sbjct: 468 KR-GARGE--PGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPG 524
Query: 188 PPQRPAQLRL 197
RP + L
Sbjct: 525 EAGRPGEAGL 534
Score = 35.0 bits (79), Expect = 0.058
Identities = 41/138 (29%), Positives = 46/138 (33%), Gaps = 28/138 (20%)
Query: 70 GKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRP--SGR 127
G+ G +P P+ G+ G P AS RG G PG AG P SGR
Sbjct: 968 GERGFPGLPGPSGEPGKQG-------------PSGASGERGPPGPMGPPGLAGPPGESGR 1014
Query: 128 --------SRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFP 179
S R G+ G G P P A G SG R P P
Sbjct: 1015 EGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGP 1074
Query: 180 APRV-----RAPPPPQRP 192
A V R P PQ P
Sbjct: 1075 AGPVGPVGARGPAGPQGP 1092
Score = 34.3 bits (77), Expect = 0.098
Identities = 35/118 (29%), Positives = 40/118 (33%), Gaps = 19/118 (16%)
Query: 68 EGGKEGHAAVPQPATRSGRLGVWG-----GPLRHSWAPRPRQASQTRGGGGGPSLPGPAG 122
E GK G VP P G G G GP + R G G LPGPAG
Sbjct: 591 EPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAG 650
Query: 123 RPSGRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPA 180
P + G +G G+ P R E G G R + PP PA
Sbjct: 651 PPG--EAGKPGEQGVPGDLGAPGPSGARG------------ERGFPGERGVQGPPGPA 694
Score = 34.3 bits (77), Expect = 0.098
Identities = 37/129 (28%), Positives = 42/129 (32%), Gaps = 17/129 (13%)
Query: 70 GKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRPSGRSR 129
G+ G A +P P G G G A RG G PGPAG P +
Sbjct: 731 GERGAAGLPGPKGDRGDAGPKG-------ADGSPGKDGVRGLTGPIGPPGPAGAPGDKGE 783
Query: 130 S-------RVGARGRLPSGGSHLPQPPRSLA---AASAWQAVARELGLSGPRPTEAPPFP 179
S GARG G P P A A E G +G + PP P
Sbjct: 784 SGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGP 843
Query: 180 APRVRAPPP 188
A P P
Sbjct: 844 AGPAGPPGP 852
Score = 32.0 bits (71), Expect = 0.49
Identities = 36/124 (29%), Positives = 48/124 (38%), Gaps = 14/124 (11%)
Query: 70 GKEGHAAVPQPATRSGRLGVWG--GPLRHSWAPRPRQASQTRGGGGGPSLPGPAGR--PS 125
G G A P P +G G G G + PR + +G G P PGPAG P+
Sbjct: 326 GATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPA 385
Query: 126 GRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRA 185
G GA G+ + G++ +A A + G SGP+ PP P
Sbjct: 386 GNP----GADGQPGAKGAN---GAPGIAGAPGFPGAR---GPSGPQGPGGPPGPKGNSGE 435
Query: 186 PPPP 189
P P
Sbjct: 436 PGAP 439
Score = 32.0 bits (71), Expect = 0.49
Identities = 30/89 (33%), Positives = 35/89 (39%), Gaps = 20/89 (22%)
Query: 70 GKEGHAAVPQPATRSGRLGVWG--GPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRPSGR 127
G G P A G+ G+ G GP+ P PR + G G P PGP G P
Sbjct: 1136 GPAGPRGPPGSAGAPGKDGLNGLPGPIG---PPGPRGRTGDAGPVGPPGPPGPPGPPGP- 1191
Query: 128 SRSRVGARGRLPSGG---SHLPQPPRSLA 153
PS G S LPQPP+ A
Sbjct: 1192 -----------PSAGFDFSFLPQPPQEKA 1209
Score = 31.6 bits (70), Expect = 0.64
Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 10/78 (12%)
Query: 113 GGPSLPGPAGRPSGRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQ-AVARELGLSGPR 171
G P LPGP G P G G GG+ PQ S +V +G SGPR
Sbjct: 136 GQPGLPGPPGPP--------GPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPR 187
Query: 172 PTEAPP-FPAPRVRAPPP 188
PP P P+ PP
Sbjct: 188 GLPGPPGAPGPQGFQGPP 205
Score = 28.1 bits (61), Expect = 7.0
Identities = 34/104 (32%), Positives = 35/104 (33%), Gaps = 22/104 (21%)
Query: 100 PRPRQASQTRGGGGGPSLPGPAG--RPSGRSRSRVGARGRLPSGGSHLPQPPRSLAAASA 157
P P S RG G P PGP G P G GA G P G P PP
Sbjct: 178 PGPMGPSGPRGLPGPPGAPGPQGFQGPPGEP-GEPGASG--PMGPRGPPGPP-------- 226
Query: 158 WQAVARELGLSGPRPTEAPPFPAPRVRAPPPPQRPAQLRLLAGL 201
G +G P P R PP PQ L AGL
Sbjct: 227 --------GKNGDDGEAGKP-GRPGERGPPGPQGARGLPGTAGL 261
>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
sapiens]
Length = 224
Score = 42.7 bits (99), Expect = 3e-04
Identities = 47/153 (30%), Positives = 55/153 (35%), Gaps = 29/153 (18%)
Query: 57 RVASRARARTWEGGKEGHAAVPQPATRSGRLGVWGGPLRHSWA----PRPRQASQTRGGG 112
+VA+R R WEGG G + A + R G WG A PR A T
Sbjct: 56 QVAARGGGRGWEGGGLG----ARRAVTAARRGEWGRARESRSAALASPRVSNAPTT---- 107
Query: 113 GGPSLPGPAGRPSG-RSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPR 171
PA R G R++ R R R GG +PPR R G SG
Sbjct: 108 -------PASRNPGLRAQERQSGR-RAAGGGGARAEPPRV--------PPCRPAGCSGGN 151
Query: 172 PTEAPPFPAPRVRAPPPPQRPAQLRLLAGLRPV 204
+ PR PP RP AGLR V
Sbjct: 152 RSRRAAGAGPRTTRRKPPPRPPGTAPAAGLRSV 184
>gi|7710145 methyl-CpG binding domain protein 2 testis-specific
isoform [Homo sapiens]
Length = 302
Score = 42.7 bits (99), Expect = 3e-04
Identities = 41/126 (32%), Positives = 45/126 (35%), Gaps = 18/126 (14%)
Query: 68 EGGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGPA-GRPSG 126
E G +G A P P + R G GG R R + G GGG G GR G
Sbjct: 33 EQGGQGSALAPSPVSGVRREGARGGG-------RGRGRWKQAGRGGGVCGRGRGRGRGRG 85
Query: 127 RSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRAP 186
R R R RGR PSGGS L G G P P P A
Sbjct: 86 RGRGRGRGRGRPPSGGSGLGGDGGGCGGG----------GSGGGGAPRREPVPFPSGSAG 135
Query: 187 PPPQRP 192
P P+ P
Sbjct: 136 PGPRGP 141
>gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo
sapiens]
Length = 411
Score = 42.7 bits (99), Expect = 3e-04
Identities = 41/126 (32%), Positives = 45/126 (35%), Gaps = 18/126 (14%)
Query: 68 EGGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGPA-GRPSG 126
E G +G A P P + R G GG R R + G GGG G GR G
Sbjct: 33 EQGGQGSALAPSPVSGVRREGARGGG-------RGRGRWKQAGRGGGVCGRGRGRGRGRG 85
Query: 127 RSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRAP 186
R R R RGR PSGGS L G G P P P A
Sbjct: 86 RGRGRGRGRGRPPSGGSGLGGDGGGCGGG----------GSGGGGAPRREPVPFPSGSAG 135
Query: 187 PPPQRP 192
P P+ P
Sbjct: 136 PGPRGP 141
>gi|119508426 alpha 3 type IX collagen [Homo sapiens]
Length = 684
Score = 42.7 bits (99), Expect = 3e-04
Identities = 51/179 (28%), Positives = 64/179 (35%), Gaps = 33/179 (18%)
Query: 56 GRVASRARA-RTWEGGKEGHAAVPQPATRSGRLGVWG--------GPLRHSWAPRPRQAS 106
G R RA E G G VP A G G G GP AP R
Sbjct: 346 GEKGERGRAGELGEAGPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQ 405
Query: 107 QTRGGGGGPSLPGPAGRPSGRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELG 166
+G G P LPGP G R VG RG GG+ P+ + +A + ELG
Sbjct: 406 GQKGSMGDPGLPGPQG-----LRGDVGDRG---PGGAAGPKGDQGIAGSDGLPGDKGELG 457
Query: 167 LS---------------GPRPTEAPPFPAPRVRAPPPPQRPAQLRLLAGLRPVVTSLGV 210
S GP+ T+ P V+ P P P L+ + G+ + GV
Sbjct: 458 PSGLVGPKGESGSRGELGPKGTQGPN-GTSGVQGVPGPPGPLGLQGVPGVPGITGKPGV 515
Score = 36.2 bits (82), Expect = 0.026
Identities = 43/148 (29%), Positives = 52/148 (35%), Gaps = 33/148 (22%)
Query: 70 GKEGHAAVPQPATRSGRLGVWG--GPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRP--- 124
G G P P + G+ G+ G GP P P+ G G P PG AG P
Sbjct: 29 GLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGPPGPK------GAPGKPGKPGEAGLPGLP 82
Query: 125 -----SGR-----------SRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLS 168
+GR R +G G GG LP PP + +GL
Sbjct: 83 GVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGPPGEAGVSGP----PGGIGLR 138
Query: 169 G-PRPTEAPPFPAPRVRAPPPPQRPAQL 195
G P P+ P P P P PP P L
Sbjct: 139 GPPGPSGLPGLPGP-PGPPGPPGHPGVL 165
Score = 33.9 bits (76), Expect = 0.13
Identities = 36/125 (28%), Positives = 40/125 (32%), Gaps = 11/125 (8%)
Query: 70 GKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRPSGRSR 129
GK G A +P G G G P P+ A RG G P PG G+
Sbjct: 71 GKPGEAGLPGLPGVDGLTGRDG-------PPGPKGAPGERGSLGPPGPPGLGGKGLPGPP 123
Query: 130 SRVGARGRLPSGGSHL--PQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRAPP 187
G G P GG L P P L G G P A P + P
Sbjct: 124 GEAGVSG--PPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPSICPPG 181
Query: 188 PPQRP 192
PP P
Sbjct: 182 PPGPP 186
Score = 28.5 bits (62), Expect = 5.4
Identities = 33/118 (27%), Positives = 36/118 (30%), Gaps = 13/118 (11%)
Query: 52 PEVVGRVASRARARTWEGGK--------EGHAAVPQPATRSGRLGVWG-----GPLRHSW 98
P V G+ AS R R GG H P GR G G GP
Sbjct: 513 PGVPGKEASEQRIRELCGGMISEQIAQLAAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIG 572
Query: 99 APRPRQASQTRGGGGGPSLPGPAGRPSGRSRSRVGARGRLPSGGSHLPQPPRSLAAAS 156
P R RG G PGP G R G G PQ P+ + S
Sbjct: 573 HPGARGPPGYRGPTGELGDPGPRGNQGDRGDKGAAGAGLDGPEGDQGPQGPQGVPGTS 630
Score = 28.1 bits (61), Expect = 7.0
Identities = 29/111 (26%), Positives = 40/111 (36%), Gaps = 21/111 (18%)
Query: 70 GKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGGGGPSLPGPAGRPSGRSR 129
G++G P PA G +G+ G PR G LPGP G P R
Sbjct: 208 GEKGDPGPPGPAGLPGSVGLQG----------PR---------GLRGLPGPLGPPG--DR 246
Query: 130 SRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGPRPTEAPPFPA 180
+G RG G+ R ++ +LG GP+ T P+
Sbjct: 247 GPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPS 297
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 42.0 bits (97), Expect = 5e-04
Identities = 61/220 (27%), Positives = 82/220 (37%), Gaps = 44/220 (20%)
Query: 2 ALPGGR------MACPGPLRLRRTSPLVLLGCPEKGSWVGPSPVLSSLMAGLSLRSPEVV 55
A PG R +A G RL + +P C +G+ P L + A + E++
Sbjct: 164 AAPGARSGAAASVAAAGGTRLAQQAPFPAARCRRRGAIRKP---LHDVTAAAFIVLVELL 220
Query: 56 GRVASRARARTWEGGKEGHAAVPQPAT--RSGRLGVWGGPLRHSWA-----------PRP 102
+ S RA + +E H A SG GGP WA P P
Sbjct: 221 FAITSGERAAS-APRQESHNFAKGCAEFYGSGARAQPGGPC---WAQGPPGRLPDPIPLP 276
Query: 103 RQASQTRGG-----GGGPSLPGPAGR-------PSGR----SRSRVGARGRLPSGGSHLP 146
+A +T G G P P GR PS R ++ RVG+R R +G P
Sbjct: 277 TRAPRTSAGLAGVGSGAPGEPAEPGRARAPRSAPSSREPRQTKRRVGSRARAGAGAVTGP 336
Query: 147 QPPRSLAAASAWQAVARELGLSGPRPTEAPPFPAPRVRAP 186
P + A +W + G R EAPP AP R P
Sbjct: 337 CPAAAQGARGSWPSPRCLPSDGGAR--EAPPTSAPHPRRP 374
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 42.0 bits (97), Expect = 5e-04
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 110 GGGGGPSLPGPAGRPSGRSRSRVGARGRLPSGGSHLPQ-----PPRSLAAASAWQAVARE 164
GGGG PS G +G G S S GA S S +PQ PP +++A++ QA A +
Sbjct: 2309 GGGGAPS--GGSGHSGGPS-SCGGAPSTSRSRPSRIPQPVRHHPPVLVSSAASSQAEADK 2365
Query: 165 L-GLSGPRPTEAPPFPAPRVRAPPPPQRP 192
+ G S P P+ PP AP P +RP
Sbjct: 2366 MSGTSTPGPSLPPPGAAPEAGPSAPSRRP 2394
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 41.6 bits (96), Expect = 6e-04
Identities = 42/137 (30%), Positives = 58/137 (42%), Gaps = 16/137 (11%)
Query: 65 RTWEGGKEGHAAVPQPATRSGRLGVWGGPLRHSWAPRPRQASQTRGGG-GGPSLP--GPA 121
R G ++ +P P+ + G GP P P + +R G GGP++P GP+
Sbjct: 208 RPMPGMQQQMPTLPPPSVSATGPGPGPGP-GPGPGPGPAPPNYSRPHGMGGPNMPPPGPS 266
Query: 122 GRPSGRSRSRVGARGRLPSGGSHLPQPPRSLAAASAWQAVARELGLSGP--RPTEAPPF- 178
G P G P GG P P +A A+A + ++L P RP+ APP
Sbjct: 267 GVPPGMPGQ--------PPGGPPKPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAV 318
Query: 179 -PAPRVRAPPPPQRPAQ 194
PA PP Q P Q
Sbjct: 319 PPAASPVMPPQTQSPGQ 335
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,609,319
Number of Sequences: 37866
Number of extensions: 969913
Number of successful extensions: 12841
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 1236
Number of HSP's that attempted gapping in prelim test: 7771
Number of HSP's gapped (non-prelim): 4751
length of query: 239
length of database: 18,247,518
effective HSP length: 99
effective length of query: 140
effective length of database: 14,498,784
effective search space: 2029829760
effective search space used: 2029829760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.