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Search of human proteins with 239757909
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757909 PREDICTED: hypothetical protein [Homo sapiens]
(127 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757909 PREDICTED: hypothetical protein [Homo sapiens] 265 5e-72
gi|239752421 PREDICTED: hypothetical protein [Homo sapiens] 263 4e-71
gi|239746936 PREDICTED: hypothetical protein [Homo sapiens] 263 4e-71
gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo sapi... 34 0.027
gi|22325364 ubiquitin associated protein 2 [Homo sapiens] 34 0.027
gi|18379346 VPS10 domain receptor protein SORCS 3 [Homo sapiens] 34 0.035
gi|239753000 PREDICTED: hypothetical protein [Homo sapiens] 33 0.059
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 33 0.059
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 33 0.059
gi|169214870 PREDICTED: similar to hCG2041260 [Homo sapiens] 33 0.077
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 32 0.10
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 32 0.13
gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo sapi... 32 0.13
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 32 0.17
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 31 0.22
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 31 0.22
gi|31542255 hypothetical protein LOC140706 [Homo sapiens] 31 0.22
gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens] 31 0.29
gi|188497758 ubiquitin associated protein 2-like isoform a [Homo... 31 0.29
gi|188497756 ubiquitin associated protein 2-like isoform b [Homo... 31 0.29
gi|27262638 sperm associated antigen 1 [Homo sapiens] 31 0.29
gi|27262636 sperm associated antigen 1 [Homo sapiens] 31 0.29
gi|239754487 PREDICTED: hypothetical protein [Homo sapiens] 30 0.38
gi|239753154 PREDICTED: hypothetical protein [Homo sapiens] 30 0.38
gi|239750123 PREDICTED: hypothetical protein XP_002347295 [Homo ... 30 0.38
gi|239749042 PREDICTED: hypothetical protein [Homo sapiens] 30 0.38
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 30 0.38
gi|239747723 PREDICTED: hypothetical protein XP_002348235 [Homo ... 30 0.38
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 30 0.38
gi|239741589 PREDICTED: hypothetical protein XP_002342258 [Homo ... 30 0.38
>gi|239757909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 127
Score = 265 bits (678), Expect = 5e-72
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MRWMAMAVAAQVCGQHDVVVWKSGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMG 60
MRWMAMAVAAQVCGQHDVVVWKSGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMG
Sbjct: 1 MRWMAMAVAAQVCGQHDVVVWKSGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMG 60
Query: 61 GAELSREGGGSPLQSEAQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAG 120
GAELSREGGGSPLQSEAQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAG
Sbjct: 61 GAELSREGGGSPLQSEAQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAG 120
Query: 121 GDPGGGQ 127
GDPGGGQ
Sbjct: 121 GDPGGGQ 127
>gi|239752421 PREDICTED: hypothetical protein [Homo sapiens]
Length = 127
Score = 263 bits (671), Expect = 4e-71
Identities = 125/127 (98%), Positives = 127/127 (100%)
Query: 1 MRWMAMAVAAQVCGQHDVVVWKSGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMG 60
MRWMAMAVAAQVCGQHDVVVWKSGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMG
Sbjct: 1 MRWMAMAVAAQVCGQHDVVVWKSGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMG 60
Query: 61 GAELSREGGGSPLQSEAQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAG 120
GAEL+REGGGSPLQSEAQGR+QEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAG
Sbjct: 61 GAELAREGGGSPLQSEAQGRQQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAG 120
Query: 121 GDPGGGQ 127
GDPGGGQ
Sbjct: 121 GDPGGGQ 127
>gi|239746936 PREDICTED: hypothetical protein [Homo sapiens]
Length = 127
Score = 263 bits (671), Expect = 4e-71
Identities = 125/127 (98%), Positives = 127/127 (100%)
Query: 1 MRWMAMAVAAQVCGQHDVVVWKSGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMG 60
MRWMAMAVAAQVCGQHDVVVWKSGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMG
Sbjct: 1 MRWMAMAVAAQVCGQHDVVVWKSGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMG 60
Query: 61 GAELSREGGGSPLQSEAQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAG 120
GAEL+REGGGSPLQSEAQGR+QEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAG
Sbjct: 61 GAELAREGGGSPLQSEAQGRQQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAG 120
Query: 121 GDPGGGQ 127
GDPGGGQ
Sbjct: 121 GDPGGGQ 127
>gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo
sapiens]
Length = 437
Score = 34.3 bits (77), Expect = 0.027
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 63 ELSREGGGSPLQSEAQGRRQEPGALFLEQRQALRGRGQER-------RGHRGGSRGREAR 115
EL +G P + + + R +E +R+ R R ++R RG RG RGR+
Sbjct: 334 ELGPDGPDGP-EEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSERGRDEA 392
Query: 116 REGAGGDPGG 125
R G GG G
Sbjct: 393 RGGGGGQDNG 402
>gi|22325364 ubiquitin associated protein 2 [Homo sapiens]
Length = 1119
Score = 34.3 bits (77), Expect = 0.027
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 91 QRQALRGRGQERRGHRGGSRGREARREGAGGD 122
++++ RGRG R RGG+RGRE R E G D
Sbjct: 125 EKESSRGRGNNNRKGRGGNRGREFRGEENGID 156
>gi|18379346 VPS10 domain receptor protein SORCS 3 [Homo sapiens]
Length = 1222
Score = 33.9 bits (76), Expect = 0.035
Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 16/99 (16%)
Query: 43 GAQLCATGAQDSVQMCMGGAELSREGGGSPLQSEAQGRR--------------QEPGALF 88
GA L TG + GAE++ + G P + A R Q P L
Sbjct: 14 GAPLVRTGLLLLSTWVLAGAEITWDATGGPGRPAAPASRPPALSPLSPRAVASQWPEELA 73
Query: 89 LEQRQALRGR--GQERRGHRGGSRGREARREGAGGDPGG 125
+R A+ GR G E +GG RG E + E G P G
Sbjct: 74 SARRAAVLGRRAGPELLPQQGGGRGGEMQVEAGGTSPAG 112
>gi|239753000 PREDICTED: hypothetical protein [Homo sapiens]
Length = 171
Score = 33.1 bits (74), Expect = 0.059
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 96 RGRGQERRGHRGGSRGREARREGAG-GDPGGGQ 127
R RG+ER GH ++ R RR+GAG G+ GGG+
Sbjct: 130 RARGKERAGH--SAQARALRRQGAGLGEGGGGE 160
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 33.1 bits (74), Expect = 0.059
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 59 MGGAELSREGGGSPLQSEAQGRRQEPGALFLEQRQALR-GRGQERRGHRGGSRGREARRE 117
+GG + + G P A RR+ PGA + R GR + R G + GSRGR
Sbjct: 407 LGGRGVCGKCGPGPWDDPA--RRRNPGAAARAKLAGQRAGRARARTGSQVGSRGR-GWGP 463
Query: 118 GAGGDPGGGQ 127
GAG P GG+
Sbjct: 464 GAGRVPSGGR 473
Score = 26.9 bits (58), Expect = 4.2
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 20/67 (29%)
Query: 61 GAELSREGGGSPLQSEAQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAG 120
G L R GG GRRQ G + GQ+R GHRGG G
Sbjct: 67 GPRLQRALGGQAWA----GRRQLHGFMLYS--------GQQRDGHRGG--------HDVG 106
Query: 121 GDPGGGQ 127
G GGG+
Sbjct: 107 GRGGGGR 113
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 33.1 bits (74), Expect = 0.059
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 59 MGGAELSREGGGSPLQSEAQGRRQEPGALFLEQRQALR-GRGQERRGHRGGSRGREARRE 117
+GG + + G P A RR+ PGA + R GR + R G + GSRGR
Sbjct: 407 LGGRGVCGKCGPGPWDDPA--RRRNPGAAARAKLAGQRAGRARARTGSQVGSRGR-GWGP 463
Query: 118 GAGGDPGGGQ 127
GAG P GG+
Sbjct: 464 GAGRVPSGGR 473
Score = 26.9 bits (58), Expect = 4.2
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 20/67 (29%)
Query: 61 GAELSREGGGSPLQSEAQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAG 120
G L R GG GRRQ G + GQ+R GHRGG G
Sbjct: 67 GPRLQRALGGQAWA----GRRQLHGFMLYS--------GQQRDGHRGG--------HDVG 106
Query: 121 GDPGGGQ 127
G GGG+
Sbjct: 107 GRGGGGR 113
>gi|169214870 PREDICTED: similar to hCG2041260 [Homo sapiens]
Length = 412
Score = 32.7 bits (73), Expect = 0.077
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 43 GAQLCATGAQDSVQMCMGGAELSREGGGSPLQSEAQGRRQEPGALF---LEQRQALRGRG 99
GAQ V GGA R G L++E + GA L++R + R G
Sbjct: 110 GAQHLGGSGLGGVTRAEGGA---RRLGTGRLRAEKDAQVMNLGAFISGDLKERDSWRVEG 166
Query: 100 QERRGHRGGSRGREARREGAGGDPGGGQ 127
G +G G E R+EG G PG G+
Sbjct: 167 CFGGGAQGLLTGLEGRQEGGGFGPGAGR 194
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 32.3 bits (72), Expect = 0.10
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 9/98 (9%)
Query: 39 QCVTGAQLCATGAQDSVQMCMGGAELSREGGGSPLQSEAQGRR--QEPGALFLEQRQALR 96
QC A GA + EL+ E L + A G + Q+ A
Sbjct: 8 QCNQAAGRAGPGAPLGAALARTPVELAAESAAPALSAAAAGVKILGSGDKKLRRQKAAAG 67
Query: 97 GRGQERRGHRGGSRGREARRE-----GAGG--DPGGGQ 127
G+ RG +G G+EAR+ GAGG + GGG+
Sbjct: 68 GKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGE 105
Score = 26.6 bits (57), Expect = 5.5
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 26/121 (21%)
Query: 23 SGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMGGAELSREGGGSPLQSEAQGRRQ 82
+G ++ W+ + S G++ GAQ + A + +GG P ++ A G +
Sbjct: 133 TGSKKPRWRAQKSAAA----GSKNRGAGAQKAA----AAAGVKSQGGEKPQKAAAAGAKS 184
Query: 83 EPGALFLEQRQALRGRGQE-RRGH-----------RGGSRGREARREGAGGD----PGGG 126
G +R+ + RG E ++G RGG R + R + A G GGG
Sbjct: 185 RSGKK--PRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGG 242
Query: 127 Q 127
+
Sbjct: 243 K 243
Score = 25.8 bits (55), Expect = 9.4
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 12/75 (16%)
Query: 61 GAELSREGGGSPLQSEAQGRRQEPGALFLEQRQALR----------GRGQERRGHRGGSR 110
G + R G S + +GR++E + F + R R G + RRG GG +
Sbjct: 187 GKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRG--GGKK 244
Query: 111 GREARREGAGGDPGG 125
++ RR G GG
Sbjct: 245 PQKQRRRGQKAATGG 259
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 32.0 bits (71), Expect = 0.13
Identities = 18/33 (54%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 96 RGRGQERRGHRGGSRGREARREGAG---GDPGG 125
RGRG RG RGGSRGR R G G GG
Sbjct: 243 RGRGYRGRGSRGGSRGRGMGRGSRGRGRGSMGG 275
>gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo
sapiens]
Length = 783
Score = 32.0 bits (71), Expect = 0.13
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 74 QSEAQGRRQEPGALFLEQRQALRG-RGQER-----RGHRGGSRGREARREGAGGDPGGGQ 127
Q E +G R+ G F QR+ RG RGQ RG R GSRG +R G G Q
Sbjct: 711 QPELEGPREGYGG-FRGQREGSRGFRGQRDGNRRFRGQREGSRGPRGQRSGGGNKSNRSQ 769
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 31.6 bits (70), Expect = 0.17
Identities = 23/55 (41%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 70 GSPLQSEAQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAGGDPG 124
GSP S +G R EPG R G G +G G RG+E R G GDPG
Sbjct: 1685 GSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKG-EPGDRGQEGPR-GPKGDPG 1737
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 31.2 bits (69), Expect = 0.22
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 11/49 (22%)
Query: 77 AQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAGGDPGG 125
AQGR PGA +G HR G+RGR +RR A GG
Sbjct: 918 AQGRAHRPGA-----------QGAPSHRHRPGARGRRSRRRAAVALAGG 955
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 31.2 bits (69), Expect = 0.22
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 11/49 (22%)
Query: 77 AQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAGGDPGG 125
AQGR PGA +G HR G+RGR +RR A GG
Sbjct: 918 AQGRAHRPGA-----------QGAPSHRHRPGARGRRSRRRAAVALAGG 955
>gi|31542255 hypothetical protein LOC140706 [Homo sapiens]
Length = 433
Score = 31.2 bits (69), Expect = 0.22
Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 12/71 (16%)
Query: 60 GGAELSREGGGS--PLQSEAQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGR----- 112
GGA +R GGG L+ + G R E+RQ G + R G GG G
Sbjct: 209 GGAAEARAGGGGGGSLERQRAGARASGS---WERRQTFSGSWERRHGGGGGGGGAGKPGG 265
Query: 113 --EARREGAGG 121
E R+ G+GG
Sbjct: 266 SWERRQAGSGG 276
>gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens]
Length = 462
Score = 30.8 bits (68), Expect = 0.29
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 50 GAQDSVQMCMGGAELSREGGG-SPLQSEAQGRRQEPGALFLEQRQALRGRGQERRGHRGG 108
GA + + +G A + E G +P ++ + A +R ALR G+ R G GG
Sbjct: 255 GASPTTENGLGAAAGAGENGHCAPPPADVEPDESSAAAERRRRRGALRRGGRRRAGAEGG 314
Query: 109 SRGREARREGAGGDPGG 125
+ G + + G G G
Sbjct: 315 AGGADGQGAGPGAAESG 331
>gi|188497758 ubiquitin associated protein 2-like isoform a [Homo
sapiens]
Length = 1087
Score = 30.8 bits (68), Expect = 0.29
Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 63 ELSREGGGSPLQSEAQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAGG 121
+ SR GG P +GR G F Q L G RG RGR R G GG
Sbjct: 129 DYSRRRGGPP----RRGRGASRGREFRGQENGLDGTKSGGPSGRGTERGRRGRGRGRGG 183
Score = 28.5 bits (62), Expect = 1.5
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 9/68 (13%)
Query: 61 GAELSREGGGSPLQSEAQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGREAR--REG 118
G ++GG + E + R R R RG R RG SRGRE R G
Sbjct: 104 GVSGQKDGGQTESNEEGKENRDR-------DRDYSRRRGGPPRRGRGASRGREFRGQENG 156
Query: 119 AGGDPGGG 126
G GG
Sbjct: 157 LDGTKSGG 164
>gi|188497756 ubiquitin associated protein 2-like isoform b [Homo
sapiens]
Length = 983
Score = 30.8 bits (68), Expect = 0.29
Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 63 ELSREGGGSPLQSEAQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAGG 121
+ SR GG P +GR G F Q L G RG RGR R G GG
Sbjct: 129 DYSRRRGGPP----RRGRGASRGREFRGQENGLDGTKSGGPSGRGTERGRRGRGRGRGG 183
Score = 28.5 bits (62), Expect = 1.5
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 9/68 (13%)
Query: 61 GAELSREGGGSPLQSEAQGRRQEPGALFLEQRQALRGRGQERRGHRGGSRGREAR--REG 118
G ++GG + E + R R R RG R RG SRGRE R G
Sbjct: 104 GVSGQKDGGQTESNEEGKENRDR-------DRDYSRRRGGPPRRGRGASRGREFRGQENG 156
Query: 119 AGGDPGGG 126
G GG
Sbjct: 157 LDGTKSGG 164
>gi|27262638 sperm associated antigen 1 [Homo sapiens]
Length = 926
Score = 30.8 bits (68), Expect = 0.29
Identities = 34/108 (31%), Positives = 44/108 (40%), Gaps = 22/108 (20%)
Query: 22 KSGE--EEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMGGAELSREGGGSPLQSEAQG 79
KSG E+GG ++ + AQ C G ++Q + G EGG P + Q
Sbjct: 353 KSGRKHEDGGGDKKPAEPAGAARAAQPCVMG---NIQKKLTG---KAEGGKRPARGAPQ- 405
Query: 80 RRQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAGGDPGGGQ 127
R Q P A G ++R R S A GA G PGGGQ
Sbjct: 406 RGQTPEA------------GADKRSPRRASAAAAAGG-GATGHPGGGQ 440
>gi|27262636 sperm associated antigen 1 [Homo sapiens]
Length = 926
Score = 30.8 bits (68), Expect = 0.29
Identities = 34/108 (31%), Positives = 44/108 (40%), Gaps = 22/108 (20%)
Query: 22 KSGE--EEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMGGAELSREGGGSPLQSEAQG 79
KSG E+GG ++ + AQ C G ++Q + G EGG P + Q
Sbjct: 353 KSGRKHEDGGGDKKPAEPAGAARAAQPCVMG---NIQKKLTG---KAEGGKRPARGAPQ- 405
Query: 80 RRQEPGALFLEQRQALRGRGQERRGHRGGSRGREARREGAGGDPGGGQ 127
R Q P A G ++R R S A GA G PGGGQ
Sbjct: 406 RGQTPEA------------GADKRSPRRASAAAAAGG-GATGHPGGGQ 440
>gi|239754487 PREDICTED: hypothetical protein [Homo sapiens]
Length = 424
Score = 30.4 bits (67), Expect = 0.38
Identities = 32/109 (29%), Positives = 40/109 (36%), Gaps = 25/109 (22%)
Query: 23 SGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMGGAELSREGGGSPLQSEAQGRRQ 82
SG E G + LS V + G G ++ +G A PL SE G ++
Sbjct: 153 SGAE--GKEVALSTVASLIRGT----VGCDSHAEVALGRASRIFGLEYFPLHSEKGGEKE 206
Query: 83 EPGALFLEQRQALRGRGQERRGHRGGSRGREARR----EGAGGDPGGGQ 127
E G RG GG GRE RR EG G GG+
Sbjct: 207 E---------------GIGERGREGGKEGREGRRKERKEGREGGREGGK 240
>gi|239753154 PREDICTED: hypothetical protein [Homo sapiens]
Length = 79
Score = 30.4 bits (67), Expect = 0.38
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 62 AELSREGGGSPLQSEAQGRR-QEPGALFLEQRQALRGRGQERRGHR 106
A LSR G +P S A+ RR +EPG + L + + G GQ+R R
Sbjct: 13 ASLSRAAGSAP--SAARRRRSREPGVMALRRARGAPGAGQQRAQQR 56
>gi|239750123 PREDICTED: hypothetical protein XP_002347295 [Homo
sapiens]
Length = 194
Score = 30.4 bits (67), Expect = 0.38
Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 19/100 (19%)
Query: 27 EGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCM--GGAELSREGGGSPLQSEAQGRRQEP 84
E GW+ + +V C A A + V++C+ GG + R G + +A+
Sbjct: 10 ENGWETKHLMVILC---AHRAAGRTRQCVRLCLSAGGGRVGRAGRAWTVNPKARAAGLRS 66
Query: 85 GALFLEQRQALRGRGQERRGHRGGSRGREARREGAGGDPG 124
GA RR RG S G AR G PG
Sbjct: 67 GA--------------PRRRRRGLSLGGGARGGACGAGPG 92
>gi|239749042 PREDICTED: hypothetical protein [Homo sapiens]
Length = 424
Score = 30.4 bits (67), Expect = 0.38
Identities = 32/109 (29%), Positives = 40/109 (36%), Gaps = 25/109 (22%)
Query: 23 SGEEEGGWQRRLSVVCQCVTGAQLCATGAQDSVQMCMGGAELSREGGGSPLQSEAQGRRQ 82
SG E G + LS V + G G ++ +G A PL SE G ++
Sbjct: 153 SGAE--GKEVALSTVASLIRGT----VGCDSHAEVALGRASRIFGLEYFPLHSEKGGEKE 206
Query: 83 EPGALFLEQRQALRGRGQERRGHRGGSRGREARR----EGAGGDPGGGQ 127
E G RG GG GRE RR EG G GG+
Sbjct: 207 E---------------GIGERGREGGKEGREGRRKERKEGREGGREGGK 240
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 30.4 bits (67), Expect = 0.38
Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 18/73 (24%)
Query: 61 GAELSREG-----GGSPLQSEAQ--GRRQEPGALFLEQRQALRGRGQERRGHRGGSRGRE 113
GA +REG GG+P A+ GRRQ+P +A RG H G + GR
Sbjct: 408 GAGPAREGPAAWPGGAPTPPHARPTGRRQDPEP----GPRAPRGGPASSGWHAGSAAGR- 462
Query: 114 ARREGAGGDPGGG 126
G DPGGG
Sbjct: 463 ------GWDPGGG 469
Score = 25.8 bits (55), Expect = 9.4
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 77 AQGRRQEPGALFLEQRQALRGRGQERRGHR-------GGSRGREARREGAGGDP 123
A GR +PG +R+A RGRG R G SR R AG P
Sbjct: 459 AAGRGWDPGGGSRARRRAARGRGCLRSARSSPHARPLGSSRSVRLLRSAAGRGP 512
>gi|239747723 PREDICTED: hypothetical protein XP_002348235 [Homo
sapiens]
Length = 79
Score = 30.4 bits (67), Expect = 0.38
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 62 AELSREGGGSPLQSEAQGRR-QEPGALFLEQRQALRGRGQERRGHR 106
A LSR G +P S A+ RR +EPG + L + + G GQ+R R
Sbjct: 13 ASLSRAAGSAP--SAARRRRSREPGVMALRRARGAPGAGQQRAQQR 56
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 30.4 bits (67), Expect = 0.38
Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 18/73 (24%)
Query: 61 GAELSREG-----GGSPLQSEAQ--GRRQEPGALFLEQRQALRGRGQERRGHRGGSRGRE 113
GA +REG GG+P A+ GRRQ+P +A RG H G + GR
Sbjct: 408 GAGPAREGPAAWPGGAPTPPHARPTGRRQDPEP----GPRAPRGGPASSGWHAGSAAGR- 462
Query: 114 ARREGAGGDPGGG 126
G DPGGG
Sbjct: 463 ------GWDPGGG 469
Score = 25.8 bits (55), Expect = 9.4
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Query: 77 AQGRRQEPGALFLEQRQALRGRGQERRGHR-------GGSRGREARREGAGGDP 123
A GR +PG +R+A RGRG R G SR R AG P
Sbjct: 459 AAGRGWDPGGGSRARRRAARGRGCLRSARSSPHARPLGSSRSVRLLRSAAGKGP 512
>gi|239741589 PREDICTED: hypothetical protein XP_002342258 [Homo
sapiens]
Length = 79
Score = 30.4 bits (67), Expect = 0.38
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 62 AELSREGGGSPLQSEAQGRR-QEPGALFLEQRQALRGRGQERRGHR 106
A LSR G +P S A+ RR +EPG + L + + G GQ+R R
Sbjct: 13 ASLSRAAGSAP--SAARRRRSREPGVMALRRARGAPGAGQQRAQQR 56
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,091,209
Number of Sequences: 37866
Number of extensions: 303557
Number of successful extensions: 2327
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 1820
Number of HSP's gapped (non-prelim): 596
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.