Search of human proteins with 239757875

Search of human proteins with 239757875

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239757875 PREDICTED: similar to L-myc-2 protein, partial
[Homo sapiens]
         (349 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757875 PREDICTED: similar to L-myc-2 protein, partial [Hom...   736   0.0  
gi|74315997 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]           423   e-118
gi|74315995 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]           423   e-118
gi|20127386 l-myc-1 proto-oncogene isoform 2 [Homo sapiens]           242   3e-64
gi|19923312 v-myc myelocytomatosis viral related oncogene, neuro...    62   6e-10
gi|71774083 myc proto-oncogene protein [Homo sapiens]                  61   2e-09
gi|7662236 TSC22 domain family, member 2 [Homo sapiens]                33   0.50 
gi|110349721 titin isoform novex-3 [Homo sapiens]                      32   0.65 
gi|110349719 titin isoform N2-A [Homo sapiens]                         32   0.65 
gi|110349717 titin isoform novex-2 [Homo sapiens]                      32   0.65 
gi|110349713 titin isoform novex-1 [Homo sapiens]                      32   0.65 
gi|110349715 titin isoform N2-B [Homo sapiens]                         32   0.65 
gi|109826351 melanophilin isoform 2 [Homo sapiens]                     32   1.1  
gi|13129108 melanophilin isoform 1 [Homo sapiens]                      32   1.1  
gi|163965366 nascent polypeptide-associated complex alpha subuni...    32   1.1  
gi|32307177 forkhead box G1 [Homo sapiens]                             31   1.9  
gi|5032033 RNA binding motif protein 6 [Homo sapiens]                  31   1.9  
gi|126362955 sodium channel, voltage-gated, type III, alpha isof...    30   2.5  
gi|126362947 sodium channel, voltage-gated, type III, alpha isof...    30   2.5  
gi|126362949 sodium channel, voltage-gated, type III, alpha isof...    30   2.5  
gi|7657465 podocalyxin-like 2 [Homo sapiens]                           30   2.5  
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]     30   3.2  
gi|207448705 GTPase activating Rap/RanGAP domain-like 3 [Homo sa...    30   4.2  
gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens]      29   5.5  
gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens]      29   5.5  
gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens]      29   5.5  
gi|142976757 immediate early response 5 [Homo sapiens]                 29   5.5  
gi|239755684 PREDICTED: hypothetical protein [Homo sapiens]            29   5.5  
gi|239750147 PREDICTED: hypothetical protein [Homo sapiens]            29   5.5  
gi|239744457 PREDICTED: hypothetical protein [Homo sapiens]            29   5.5  

>gi|239757875 PREDICTED: similar to L-myc-2 protein, partial [Homo
           sapiens]
          Length = 349

 Score =  736 bits (1901), Expect = 0.0
 Identities = 349/349 (100%), Positives = 349/349 (100%)

Query: 1   MGKDPEEVSVKRNQPLRNKQRAGRALGGALCACVECPAAPSWRGTSLLQVASCVSKQANM 60
           MGKDPEEVSVKRNQPLRNKQRAGRALGGALCACVECPAAPSWRGTSLLQVASCVSKQANM
Sbjct: 1   MGKDPEEVSVKRNQPLRNKQRAGRALGGALCACVECPAAPSWRGTSLLQVASCVSKQANM 60

Query: 61  DRDSYHHYFYDYDGGEDFYRSTTPSEDIWKKFELVPPPWDLGPAAGNPALSFGLLEPWPV 120
           DRDSYHHYFYDYDGGEDFYRSTTPSEDIWKKFELVPPPWDLGPAAGNPALSFGLLEPWPV
Sbjct: 61  DRDSYHHYFYDYDGGEDFYRSTTPSEDIWKKFELVPPPWDLGPAAGNPALSFGLLEPWPV 120

Query: 121 GCAGDETESQDYWKAWDANYASLIRRDCMWSGFSTQEPLERAVSDLLAVGAPSGYSPKEF 180
           GCAGDETESQDYWKAWDANYASLIRRDCMWSGFSTQEPLERAVSDLLAVGAPSGYSPKEF
Sbjct: 121 GCAGDETESQDYWKAWDANYASLIRRDCMWSGFSTQEPLERAVSDLLAVGAPSGYSPKEF 180

Query: 181 ATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSESPSDSEGEEIDVTVKKRQSLSTRKPV 240
           ATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSESPSDSEGEEIDVTVKKRQSLSTRKPV
Sbjct: 181 ATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSESPSDSEGEEIDVTVKKRQSLSTRKPV 240

Query: 241 IIAVRADLLDPRMNLFHISIHQQQHNYAAPFPPESCFQEGAPKRMPPKEALEREAPGGKD 300
           IIAVRADLLDPRMNLFHISIHQQQHNYAAPFPPESCFQEGAPKRMPPKEALEREAPGGKD
Sbjct: 241 IIAVRADLLDPRMNLFHISIHQQQHNYAAPFPPESCFQEGAPKRMPPKEALEREAPGGKD 300

Query: 301 DKEDEEIVSLPPVESEAAQSCQPKPIHYDTENWTKKKYHSYLERKRRND 349
           DKEDEEIVSLPPVESEAAQSCQPKPIHYDTENWTKKKYHSYLERKRRND
Sbjct: 301 DKEDEEIVSLPPVESEAAQSCQPKPIHYDTENWTKKKYHSYLERKRRND 349


>gi|74315997 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]
          Length = 364

 Score =  423 bits (1087), Expect = e-118
 Identities = 213/296 (71%), Positives = 229/296 (77%), Gaps = 6/296 (2%)

Query: 60  MDRDSYHHYFYDYDGGEDFYRSTTPSEDIWKKFELVP-----PPWDLGPAAGNPALSFGL 114
           MD DSY HYFYDYD GEDFYRST PSEDIWKKFELVP     PPW LGP AG+PA   G 
Sbjct: 1   MDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGAGDPAPGIGP 60

Query: 115 LEPWPVGCAGDETESQDYWKAWDANYASLIRRDCMWSGFSTQEPLERAVSDLLAVGAPSG 174
            EPWP GC GDE ES+ + K W  NYAS+IRRDCMWSGFS +E LERAVSD LA GAP G
Sbjct: 61  PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERAVSDRLAPGAPRG 120

Query: 175 YSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSESPSDSEGEEID-VTVKKRQS 233
             PK  A PD TP LEAGN AP  PC LGEPK QACS SESPSDSE EEID VTV+KRQS
Sbjct: 121 NPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDSENEEIDVVTVEKRQS 180

Query: 234 LSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNYAAPFPPESCFQEGAPKRMPPKEALER 293
           L  RKPV I VRAD LDP M  FHISIHQQQHNYAA FPPESC QE A +R P +E LER
Sbjct: 181 LGIRKPVTITVRADPLDPCMKHFHISIHQQQHNYAARFPPESCSQEEASERGPQEEVLER 240

Query: 294 EAPGGKDDKEDEEIVSLPPVESEAAQSCQPKPIHYDTENWTKKKYHSYLERKRRND 349
           +A G K+D+EDEEIVS PPVESEAAQSC PKP+  DTE+ TK+K H++LERKRRND
Sbjct: 241 DAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRND 296


>gi|74315995 l-myc-1 proto-oncogene isoform 1 [Homo sapiens]
          Length = 364

 Score =  423 bits (1087), Expect = e-118
 Identities = 213/296 (71%), Positives = 229/296 (77%), Gaps = 6/296 (2%)

Query: 60  MDRDSYHHYFYDYDGGEDFYRSTTPSEDIWKKFELVP-----PPWDLGPAAGNPALSFGL 114
           MD DSY HYFYDYD GEDFYRST PSEDIWKKFELVP     PPW LGP AG+PA   G 
Sbjct: 1   MDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGAGDPAPGIGP 60

Query: 115 LEPWPVGCAGDETESQDYWKAWDANYASLIRRDCMWSGFSTQEPLERAVSDLLAVGAPSG 174
            EPWP GC GDE ES+ + K W  NYAS+IRRDCMWSGFS +E LERAVSD LA GAP G
Sbjct: 61  PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERAVSDRLAPGAPRG 120

Query: 175 YSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSESPSDSEGEEID-VTVKKRQS 233
             PK  A PD TP LEAGN AP  PC LGEPK QACS SESPSDSE EEID VTV+KRQS
Sbjct: 121 NPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDSENEEIDVVTVEKRQS 180

Query: 234 LSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNYAAPFPPESCFQEGAPKRMPPKEALER 293
           L  RKPV I VRAD LDP M  FHISIHQQQHNYAA FPPESC QE A +R P +E LER
Sbjct: 181 LGIRKPVTITVRADPLDPCMKHFHISIHQQQHNYAARFPPESCSQEEASERGPQEEVLER 240

Query: 294 EAPGGKDDKEDEEIVSLPPVESEAAQSCQPKPIHYDTENWTKKKYHSYLERKRRND 349
           +A G K+D+EDEEIVS PPVESEAAQSC PKP+  DTE+ TK+K H++LERKRRND
Sbjct: 241 DAAGEKEDEEDEEIVSPPPVESEAAQSCHPKPVSSDTEDVTKRKNHNFLERKRRND 296


>gi|20127386 l-myc-1 proto-oncogene isoform 2 [Homo sapiens]
          Length = 206

 Score =  242 bits (618), Expect = 3e-64
 Identities = 118/165 (71%), Positives = 123/165 (74%), Gaps = 5/165 (3%)

Query: 60  MDRDSYHHYFYDYDGGEDFYRSTTPSEDIWKKFELVP-----PPWDLGPAAGNPALSFGL 114
           MD DSY HYFYDYD GEDFYRST PSEDIWKKFELVP     PPW LGP AG+PA   G 
Sbjct: 1   MDYDSYQHYFYDYDCGEDFYRSTAPSEDIWKKFELVPSPPTSPPWGLGPGAGDPAPGIGP 60

Query: 115 LEPWPVGCAGDETESQDYWKAWDANYASLIRRDCMWSGFSTQEPLERAVSDLLAVGAPSG 174
            EPWP GC GDE ES+ + K W  NYAS+IRRDCMWSGFS +E LERAVSD LA GAP G
Sbjct: 61  PEPWPGGCTGDEAESRGHSKGWGRNYASIIRRDCMWSGFSARERLERAVSDRLAPGAPRG 120

Query: 175 YSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSESPSDS 219
             PK  A PD TP LEAGN AP  PC LGEPK QACS SESPSDS
Sbjct: 121 NPPKASAAPDCTPSLEAGNPAPAAPCPLGEPKTQACSGSESPSDS 165


>gi|19923312 v-myc myelocytomatosis viral related oncogene,
           neuroblastoma derived [Homo sapiens]
          Length = 464

 Score = 62.4 bits (150), Expect = 6e-10
 Identities = 48/134 (35%), Positives = 61/134 (45%), Gaps = 26/134 (19%)

Query: 54  VSKQANMDRDSYHHYFYD-----YDGGEDFYRSTTPSEDIWKKFELVPPPWDLGPAAGNP 108
           + K  +++ DS    FY      Y GG D   ST P EDIWKKFEL+P P  L P+ G  
Sbjct: 13  ICKNPDLEFDSLQPCFYPDEDDFYFGGPD---STPPGEDIWKKFELLPTP-PLSPSRG-- 66

Query: 109 ALSFGLLEPWPVGCAGDETESQDYWKAWDANYA------------SLIRRDCMWSGFSTQ 156
              F      P     +     + W +     A             +I +DCMWSGFS +
Sbjct: 67  ---FAEHSSEPPSWVTEMLLENELWGSPAEEDAFGLGGLGGLTPNPVILQDCMWSGFSAR 123

Query: 157 EPLERAVSDLLAVG 170
           E LERAVS+ L  G
Sbjct: 124 EKLERAVSEKLQHG 137



 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 30/159 (18%)

Query: 203 GEPKIQACSRSESPSDSEGEEIDV-TVKKRQSLSTRKPVI---IAVR---ADLLDPRMNL 255
           GE  +      +   + E EEIDV TV+KR+S S  K V    I VR   A L   R   
Sbjct: 256 GEDTLSDSDDEDDEEEDEEEEIDVVTVEKRRSSSNTKAVTTFTITVRPKNAALGPGRAQS 315

Query: 256 FHISIHQ-----QQHNYAAPFPPESCFQEGAPKRMPPKEALEREAPGGKDDKEDEEIVSL 310
             + + +     QQHNYAAP P                     +AP  K  K +     L
Sbjct: 316 SELILKRCLPIHQQHNYAAPSPYVE----------------SEDAPPQKKIKSEASPRPL 359

Query: 311 PPVESEAAQSCQPKPIHYDTENWTKKKYHSYLERKRRND 349
             V    A+S  P+  + D+E+  +++ H+ LER+RRND
Sbjct: 360 KSVIPPKAKSLSPR--NSDSEDSERRRNHNILERQRRND 396


>gi|71774083 myc proto-oncogene protein [Homo sapiens]
          Length = 454

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 92/390 (23%), Positives = 131/390 (33%), Gaps = 118/390 (30%)

Query: 52  SCVSKQANMDRDSYHHYFYDYDGGEDFYRST--------TPSEDIWKKFELVPPPWDLGP 103
           S  ++  ++D DS   YFY  D  E+FY+           PSEDIWKKFEL+P P  L P
Sbjct: 21  SFTNRNYDLDYDSVQPYFY-CDEEENFYQQQQQSELQPPAPSEDIWKKFELLPTP-PLSP 78

Query: 104 AAGNPALSFGLLEPWPVGCAGDETESQDYWKAWD-------------------------A 138
           +  +   S   +   P    GD       +   D                          
Sbjct: 79  SRRSGLCSPSYVAVTPFSLRGDNDGGGGSFSTADQLEMVTELLGGDMVNQSFICDPDDET 138

Query: 139 NYASLIRRDCMWSGFSTQ-------------------------------------EPLER 161
              ++I +DCMWSGFS                                       + L  
Sbjct: 139 FIKNIIIQDCMWSGFSAAAKLVSEKLASYQAARKDSGSPNPARGHSVCSTSSLYLQDLSA 198

Query: 162 AVSDLLAVGAPSGYSPKEFATPDYTPELEAGNLAPIFPCLL--------GEPKIQACSRS 213
           A S+ +       Y   + ++P      ++   +P    LL        G P+       
Sbjct: 199 AASECIDPSVVFPYPLNDSSSPKSCASQDSSAFSPSSDSLLSSTESSPQGSPEPLVLHEE 258

Query: 214 ESP---SDSEGEEID------VTVKKRQSLSTRKPVIIAVRADLLDPR-----MNLFHIS 259
             P   SDSE E+ D      V+V+KRQ+   R             P      +   H+S
Sbjct: 259 TPPTTSSDSEEEQEDEEEIDVVSVEKRQAPGKRSESGSPSAGGHSKPPHSPLVLKRCHVS 318

Query: 260 IHQQQHNYAAPFPPESCFQEGAPKRMPPKEALEREAPGGKDDKEDEEIVSLPPVESEAAQ 319
            H  QHNYAAP                   +  ++ P  K  K D   V      +    
Sbjct: 319 TH--QHNYAAP------------------PSTRKDYPAAKRVKLDSVRVLRQISNNRKCT 358

Query: 320 SCQPKPIHYDTENWTKKKYHSYLERKRRND 349
           S    P   DTE   K++ H+ LER+RRN+
Sbjct: 359 S----PRSSDTEENVKRRTHNVLERQRRNE 384


>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
          Length = 780

 Score = 32.7 bits (73), Expect = 0.50
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 168 AVGAPSGYSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSESPSDSE 220
           AVGAP+   P++FA P   P++  G+L P+ P    E   Q  +  + PS ++
Sbjct: 345 AVGAPAAQQPQQFAYPQ--PQIPPGHLLPVQPSGQSEYLQQHVAGLQPPSPAQ 395


>gi|110349721 titin isoform novex-3 [Homo sapiens]
          Length = 5604

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)

Query: 174 GYSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSE-SPSDSEGEEIDVTVKKRQ 232
           GY  +  A     P     +   + P  +    IQA S +    +D +G  I   +KK  
Sbjct: 736 GYKERISAAKVAEPPQRPASEPHVVPKAVKPRVIQAPSETHIKTTDQKGMHISSQIKKTT 795

Query: 233 SLSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNYAA 269
            L+T + V +  R     P   +  IS+ + +H Y A
Sbjct: 796 DLTTERLVHVDKRPRTASPHFTVSKISVPKTEHGYEA 832


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)

Query: 174 GYSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSE-SPSDSEGEEIDVTVKKRQ 232
           GY  +  A     P     +   + P  +    IQA S +    +D +G  I   +KK  
Sbjct: 736 GYKERISAAKVAEPPQRPASEPHVVPKAVKPRVIQAPSETHIKTTDQKGMHISSQIKKTT 795

Query: 233 SLSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNYAA 269
            L+T + V +  R     P   +  IS+ + +H Y A
Sbjct: 796 DLTTERLVHVDKRPRTASPHFTVSKISVPKTEHGYEA 832


>gi|110349717 titin isoform novex-2 [Homo sapiens]
          Length = 27118

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)

Query: 174 GYSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSE-SPSDSEGEEIDVTVKKRQ 232
           GY  +  A     P     +   + P  +    IQA S +    +D +G  I   +KK  
Sbjct: 690 GYKERISAAKVAEPPQRPASEPHVVPKAVKPRVIQAPSETHIKTTDQKGMHISSQIKKTT 749

Query: 233 SLSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNYAA 269
            L+T + V +  R     P   +  IS+ + +H Y A
Sbjct: 750 DLTTERLVHVDKRPRTASPHFTVSKISVPKTEHGYEA 786


>gi|110349713 titin isoform novex-1 [Homo sapiens]
          Length = 27051

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)

Query: 174 GYSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSE-SPSDSEGEEIDVTVKKRQ 232
           GY  +  A     P     +   + P  +    IQA S +    +D +G  I   +KK  
Sbjct: 690 GYKERISAAKVAEPPQRPASEPHVVPKAVKPRVIQAPSETHIKTTDQKGMHISSQIKKTT 749

Query: 233 SLSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNYAA 269
            L+T + V +  R     P   +  IS+ + +H Y A
Sbjct: 750 DLTTERLVHVDKRPRTASPHFTVSKISVPKTEHGYEA 786


>gi|110349715 titin isoform N2-B [Homo sapiens]
          Length = 26926

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)

Query: 174 GYSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSE-SPSDSEGEEIDVTVKKRQ 232
           GY  +  A     P     +   + P  +    IQA S +    +D +G  I   +KK  
Sbjct: 690 GYKERISAAKVAEPPQRPASEPHVVPKAVKPRVIQAPSETHIKTTDQKGMHISSQIKKTT 749

Query: 233 SLSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNYAA 269
            L+T + V +  R     P   +  IS+ + +H Y A
Sbjct: 750 DLTTERLVHVDKRPRTASPHFTVSKISVPKTEHGYEA 786


>gi|109826351 melanophilin isoform 2 [Homo sapiens]
          Length = 572

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 211 SRSESPSDSEGEEIDVTVKKRQSLSTRKPVIIAVRA--------DLLDPRMNLFHISIHQ 262
           S     +D +GE       + Q   ++K  +++V          D   P+ +  H+S   
Sbjct: 159 SGDSDQTDEDGEPGSEAQAQAQPFGSKKKRLLSVHDFDFEGDSDDSTQPQGHSLHLSSVP 218

Query: 263 QQHNYAAPFPPESCFQEGAPKRMPPKEALEREAPGGKDDKEDEEIVSLPPVESEAAQSCQ 322
           +  +       ESC ++ AP +    E  +  A G     E++     P      A+ C 
Sbjct: 219 EARDSPQSLTDESCSEKAAPHKAEGLEEADTGASGCHSHPEEQPTSISPSRHGALAELCP 278

Query: 323 PKPIH 327
           P   H
Sbjct: 279 PGGSH 283


>gi|13129108 melanophilin isoform 1 [Homo sapiens]
          Length = 600

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 211 SRSESPSDSEGEEIDVTVKKRQSLSTRKPVIIAVRA--------DLLDPRMNLFHISIHQ 262
           S     +D +GE       + Q   ++K  +++V          D   P+ +  H+S   
Sbjct: 159 SGDSDQTDEDGEPGSEAQAQAQPFGSKKKRLLSVHDFDFEGDSDDSTQPQGHSLHLSSVP 218

Query: 263 QQHNYAAPFPPESCFQEGAPKRMPPKEALEREAPGGKDDKEDEEIVSLPPVESEAAQSCQ 322
           +  +       ESC ++ AP +    E  +  A G     E++     P      A+ C 
Sbjct: 219 EARDSPQSLTDESCSEKAAPHKAEGLEEADTGASGCHSHPEEQPTSISPSRHGALAELCP 278

Query: 323 PKPIH 327
           P   H
Sbjct: 279 PGGSH 283


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 39/171 (22%), Positives = 58/171 (33%), Gaps = 16/171 (9%)

Query: 158  PLERAVSDLLAVGAPSGYSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQA---CSRSE 214
            P  +    L AV  PS   PKE   P       +   AP  P  +G P + A    S  E
Sbjct: 1459 PSSKGDPTLPAVTPPS---PKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKE 1515

Query: 215  SPSDSEGEEIDVTVKKRQSLSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNYAAPFPPE 274
             P+       D        LS + P  +A +  L+ P M     ++   +   A P P E
Sbjct: 1516 VPATPSSRR-DPIAPTATLLSKKTPATLAPKEALIPPAM-----TVPSPKKTPAIPTPKE 1569

Query: 275  SCFQEGAPKRMPPKEALEREAPGGKDDKEDEEIVSLPPVESEAAQSCQPKP 325
            +     + +   P         G    KE    + +PP  +  +    P P
Sbjct: 1570 APATPSSKEASSPPAVTPSTYKGAPSPKE----LLIPPAVTSPSPKEAPTP 1616


>gi|32307177 forkhead box G1 [Homo sapiens]
          Length = 489

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 15/105 (14%)

Query: 221 GEEIDVTVKKRQSLSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNY-----------AA 269
           G+  +V +  + S S    V  AV+ D  +   +  H + H  QH++            A
Sbjct: 5   GDRKEVKMIPKSSFSINSLVPEAVQND--NHHASHGHHNSHHPQHHHHHHHHHHHPPPPA 62

Query: 270 PFPPESCFQEGAPKRMPP--KEALEREAPGGKDDKEDEEIVSLPP 312
           P PP    Q+  P   PP  +    R AP   DDK  ++++  PP
Sbjct: 63  PQPPPPPQQQQPPPPPPPAPQPPQTRGAPAADDDKGPQQLLLPPP 107


>gi|5032033 RNA binding motif protein 6 [Homo sapiens]
          Length = 1123

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 43/179 (24%), Positives = 66/179 (36%), Gaps = 21/179 (11%)

Query: 146 RDCMWSGFSTQEPLERAVSDLLAVGAPSGYSPKEFATPDYTPELEAGNLAPIFPCLLGEP 205
           R+  WS   T    +++ SD     + +GY     A   Y P  +     P  P L  E 
Sbjct: 770 RNSDWSS-DTNRQGQQSSSDCYIYDSATGYYYDPLAGTYYDPNTQQEVYVPQDPGLPEEE 828

Query: 206 KIQA---CSRSESPSDSEGEEIDVTVKKRQSLSTRKPVIIAVRADLLDPRMNLFHISIHQ 262
           +I+     S+ +S S  E  + D   KK + ++  +      +A   D            
Sbjct: 829 EIKEKKPTSQGKSSSKKEMSKRDGKEKKDRGVTRFQENASEGKAPAEDV----------- 877

Query: 263 QQHNYAAPFPPESCFQEGAP--KRMPPKEALEREAPGGKDDKEDEEIVSLPPVESEAAQ 319
               +  P PP    +E  P  K + P   L  E  G  D +E+EE    PP +   AQ
Sbjct: 878 ----FKKPLPPTVKKEESPPPPKVVNPLIGLLGEYGGDSDYEEEEEEEQTPPPQPRTAQ 932


>gi|126362955 sodium channel, voltage-gated, type III, alpha isoform 3
            [Homo sapiens]
          Length = 1951

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 15/130 (11%)

Query: 170  GAPSGYSPKEFATP--DYTPELEAGNLAPIFPCLLGEPKIQACSRSESPSDSEGEEIDVT 227
            G  +G S +++     DY   +   +L    P  +GE   +  +  E  S+SE EE   +
Sbjct: 1024 GVGTGSSVEKYVIDENDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESELEE---S 1080

Query: 228  VKKRQSLSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNYAAPFPPESCFQEGAPKRMPP 287
             +K  + S+ +   +    D++ PR         Q +        PE+CF EG  K+ P 
Sbjct: 1081 KEKLNATSSSEGSTV----DVVLPREG------EQAETEPEEDLKPEACFTEGCIKKFPF 1130

Query: 288  KEALEREAPG 297
             +    E  G
Sbjct: 1131 CQVSTEEGKG 1140


>gi|126362947 sodium channel, voltage-gated, type III, alpha isoform 2
            [Homo sapiens]
          Length = 1951

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 15/130 (11%)

Query: 170  GAPSGYSPKEFATP--DYTPELEAGNLAPIFPCLLGEPKIQACSRSESPSDSEGEEIDVT 227
            G  +G S +++     DY   +   +L    P  +GE   +  +  E  S+SE EE   +
Sbjct: 1024 GVGTGSSVEKYVIDENDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESELEE---S 1080

Query: 228  VKKRQSLSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNYAAPFPPESCFQEGAPKRMPP 287
             +K  + S+ +   +    D++ PR         Q +        PE+CF EG  K+ P 
Sbjct: 1081 KEKLNATSSSEGSTV----DVVLPREG------EQAETEPEEDLKPEACFTEGCIKKFPF 1130

Query: 288  KEALEREAPG 297
             +    E  G
Sbjct: 1131 CQVSTEEGKG 1140


>gi|126362949 sodium channel, voltage-gated, type III, alpha isoform 1
            [Homo sapiens]
          Length = 2000

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 15/130 (11%)

Query: 170  GAPSGYSPKEFATP--DYTPELEAGNLAPIFPCLLGEPKIQACSRSESPSDSEGEEIDVT 227
            G  +G S +++     DY   +   +L    P  +GE   +  +  E  S+SE EE   +
Sbjct: 1073 GVGTGSSVEKYVIDENDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESELEE---S 1129

Query: 228  VKKRQSLSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNYAAPFPPESCFQEGAPKRMPP 287
             +K  + S+ +   +    D++ PR         Q +        PE+CF EG  K+ P 
Sbjct: 1130 KEKLNATSSSEGSTV----DVVLPREG------EQAETEPEEDLKPEACFTEGCIKKFPF 1179

Query: 288  KEALEREAPG 297
             +    E  G
Sbjct: 1180 CQVSTEEGKG 1189


>gi|7657465 podocalyxin-like 2 [Homo sapiens]
          Length = 605

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 42/155 (27%), Positives = 60/155 (38%), Gaps = 14/155 (9%)

Query: 164 SDLLAVGAPSGYSPKEFATPDYTPELEAGNLAPI--FPCLLGEPKIQACSRSESPSDSEG 221
           + LL +  P+G  P +   P  T  L AG  AP   FP    E      SR   P     
Sbjct: 45  TSLLDLLLPTGLEPLDSEEPSETMGLGAGLGAPGSGFPSEENEE-----SRILQPPQYFW 99

Query: 222 EEIDVTVKKRQSLSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNYAAPFPPESCFQEGA 281
           EE +        L    P    V  DL +   ++   S  Q+  N  +P P  +  +   
Sbjct: 100 EEEEELNDSSLDLG---PTADYVFPDLTEKAGSIEDTSQAQELPNLPSPLPKMNLVEP-- 154

Query: 282 PKRMPPKEALEREAPGGKDDKEDEEIVSLPPVESE 316
           P  MPP+E  E E    ++++E EE+      E E
Sbjct: 155 PWHMPPRE--EEEEEEEEEEREKEEVEKQEEEEEE 187


>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
          Length = 3664

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 49/183 (26%), Positives = 74/183 (40%), Gaps = 21/183 (11%)

Query: 157  EPLERAVSDLLAVGAPSGYSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSESP 216
            EP    V  L  V  P G  P + A       +E G+     P L  +P     S S++ 
Sbjct: 1688 EPAPAPVEQLEQVDLPPGADPDKEAAM-MPAGVEEGSSGDQPPYLDAKPPTPGASFSQAE 1746

Query: 217  SDSEGEEIDVTVKKRQSLSTRKPVIIAVRADLLDPRMNLFHISIHQQQHNYAAPFPPESC 276
            S+     +D      Q LS  KP   +  A+  +P+         ++    A   P  + 
Sbjct: 1747 SN-----VDPEPDSTQPLS--KPAQKSEEAN--EPKA--------EKPDATADAEPDANQ 1789

Query: 277  FQEGAPKRMPP-KEALEREAP-GGKDDKEDEEIVSLPPVESEAAQSCQPKPIHYDTENWT 334
              E AP+  PP  E LE + P   KD K ++   S  PV++ AA S   KP+   +E   
Sbjct: 1790 KAEAAPESQPPASEDLEVDPPVAAKDKKPNKSKRSKTPVQA-AAVSIVEKPVTRKSERID 1848

Query: 335  KKK 337
            ++K
Sbjct: 1849 REK 1851


>gi|207448705 GTPase activating Rap/RanGAP domain-like 3 [Homo
           sapiens]
          Length = 1013

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 21/150 (14%)

Query: 162 AVSDLLAVGAPSGYSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRSESP-SDSE 220
           AV+++ + G+  G S +       +P+   G   P+FP  LGE +IQ+ +  + P  +  
Sbjct: 806 AVNEVSSGGSSKGASARN------SPQTPPGRDTPVFPSSLGEGEIQSKNLYKIPLRNLV 859

Query: 221 GEEIDVTVKK---RQSLSTRKPVIIAVRADLLDPRMNLFHISI-------HQQQHNYAAP 270
           G  I+  +K     + ++   P+ + + A  +   ++L  + I        ++    +  
Sbjct: 860 GRSIERPLKSPLVSKVITPPTPISVGLAAIPVTHSLSLSRMEIKEIASRTRRELLGLSDE 919

Query: 271 FPPESCFQEGAPK-RMPPKEALEREAPGGK 299
             P+S   EGAPK +  P++ LE    G K
Sbjct: 920 GGPKS---EGAPKAKSKPRKRLEESQGGPK 946


>gi|110347400 odz, odd Oz/ten-m homolog 1 isoform 3 [Homo sapiens]
          Length = 2725

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 11/22 (50%), Positives = 16/22 (72%)

Query: 80   RSTTPSEDIWKKFELVPPPWDL 101
            R TTP+  IWK+  L+P P++L
Sbjct: 2384 RWTTPNHHIWKQLNLLPKPFNL 2405


>gi|253970446 odz, odd Oz/ten-m homolog 1 isoform 2 [Homo sapiens]
          Length = 2731

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 11/22 (50%), Positives = 16/22 (72%)

Query: 80   RSTTPSEDIWKKFELVPPPWDL 101
            R TTP+  IWK+  L+P P++L
Sbjct: 2390 RWTTPNHHIWKQLNLLPKPFNL 2411


>gi|253970444 odz, odd Oz/ten-m homolog 1 isoform 1 [Homo sapiens]
          Length = 2732

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 11/22 (50%), Positives = 16/22 (72%)

Query: 80   RSTTPSEDIWKKFELVPPPWDL 101
            R TTP+  IWK+  L+P P++L
Sbjct: 2391 RWTTPNHHIWKQLNLLPKPFNL 2412


>gi|142976757 immediate early response 5 [Homo sapiens]
          Length = 327

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 291 LEREAPGGKDDKEDEEIVSLPPVESEAAQSCQPKPIHYDTENWT 334
           L R++PGG   +E+EE     P  +E  Q C  KP+  D   W+
Sbjct: 280 LLRKSPGG--GREEEEGEESGPEAAEPGQICCDKPVLRDMNPWS 321


>gi|239755684 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 415

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 5/68 (7%)

Query: 159 LERAVSDLLAVGAP-----SGYSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRS 213
           L   +SD    GAP     SGYS +  +    +P    G    +  CLL  P     S  
Sbjct: 222 LRGQLSDGHGCGAPGSTRRSGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVP 281

Query: 214 ESPSDSEG 221
           ++PSDS G
Sbjct: 282 QAPSDSAG 289


>gi|239750147 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 415

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 5/68 (7%)

Query: 159 LERAVSDLLAVGAP-----SGYSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRS 213
           L   +SD    GAP     SGYS +  +    +P    G    +  CLL  P     S  
Sbjct: 222 LRGQLSDGHGCGAPGSTRRSGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVP 281

Query: 214 ESPSDSEG 221
           ++PSDS G
Sbjct: 282 QAPSDSAG 289


>gi|239744457 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 351

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 5/68 (7%)

Query: 159 LERAVSDLLAVGAP-----SGYSPKEFATPDYTPELEAGNLAPIFPCLLGEPKIQACSRS 213
           L   +SD    GAP     SGYS +  +    +P    G    +  CLL  P     S  
Sbjct: 158 LRGQLSDGHGCGAPGSTRRSGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVP 217

Query: 214 ESPSDSEG 221
           ++PSDS G
Sbjct: 218 QAPSDSAG 225


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.133    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,269,714
Number of Sequences: 37866
Number of extensions: 941766
Number of successful extensions: 2453
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 2415
Number of HSP's gapped (non-prelim): 68
length of query: 349
length of database: 18,247,518
effective HSP length: 103
effective length of query: 246
effective length of database: 14,347,320
effective search space: 3529440720
effective search space used: 3529440720
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.