Guide to the Human Genome
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Name: MYCL1 Sequence: fasta or formatted (364aa) NCBI GI: 74315997
Description:

l-myc-1 proto-oncogene isoform 1

Referenced in:

Lung
Myc and Related Functions

Other entries for this name:
alt prot [206aa] l-myc-1 proto-oncogene isoform 2
alt mRNA [364aa] l-myc-1 proto-oncogene isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         33           2
 C cysteine            3.0         11           1
 D aspartate           6.0         22           1
 E glutamate           9.6         35           2
 F phenylalanine       2.2          8           1
 G glycine             6.6         24           2
 H histidine           2.2          8           1
 I isoleucine          3.3         12           2
 K lysine              5.2         19           2
 L leucine             5.8         21           1
 M methionine          1.1          4           1
 N asparagine          2.2          8           1
 P proline            10.4         38           3
 Q glutamine           4.4         16           3
 R arginine            7.7         28           2
 S serine              8.8         32           2
 T threonine           3.6         13           1
 V valine              4.4         16           2
 W tryptophan          1.4          5           1
 Y tyrosine            3.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   l-myc-1 proto-oncogene isoform 1 
MYCL1                 1.000   l-myc-1 proto-oncogene isoform 1 
LOC100293553          0.541   PREDICTED: similar to L-myc-2 protein, partial [Hom...
MYCL1                 0.463   l-myc-1 proto-oncogene isoform 2 
MYCN                  0.178   v-myc myelocytomatosis viral related oncogene, neuro...
MYC                   0.174   myc proto-oncogene protein 
MAX                   0.037   MAX protein isoform b 
MXD3                  0.037   MAX dimerization protein 3 isoform b 
MXD3                  0.037   MAX dimerization protein 3 isoform a 
MAX                   0.034   MAX protein isoform e 
MAX                   0.034   MAX protein isoform c 
MAX                   0.034   MAX protein isoform a 
CASKIN2               0.030   cask-interacting protein 2 isoform b 
CASKIN2               0.030   cask-interacting protein 2 isoform a 
MXI1                  0.027   MAX interactor 1 isoform b 
ARNT                  0.026   aryl hydrocarbon receptor nuclear translocator isofo...
LMTK3                 0.026   lemur tyrosine kinase 3 
ARNT                  0.024   aryl hydrocarbon receptor nuclear translocator isofo...
ARNT                  0.024   aryl hydrocarbon receptor nuclear translocator isofor...
KIAA1211              0.024   hypothetical protein LOC57482 
EGR4                  0.023   early growth response 4 
REXO1                 0.023   transcription elongation factor B polypeptide 3 bin...
MXI1                  0.023   MAX interactor 1 isoform a 
MNT                   0.023   MAX binding protein 
SREBF1                0.022   sterol regulatory element binding transcription fact...
SREBF1                0.022   sterol regulatory element binding transcription fact...
ARNT2                 0.022   aryl hydrocarbon receptor nuclear translocator 2 [Ho...
NEUROD2               0.020   neurogenic differentiation 2 
PRR12                 0.020   proline rich 12 
AFF1                  0.020   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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