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Search of human proteins with 239757736
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757736 PREDICTED: hypothetical protein [Homo sapiens]
(273 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757736 PREDICTED: hypothetical protein [Homo sapiens] 567 e-162
gi|239752235 PREDICTED: hypothetical protein XP_002348167 [Homo ... 564 e-161
gi|13899269 SRY-box 7 [Homo sapiens] 36 0.041
gi|239747084 PREDICTED: hypothetical protein XP_002343912 [Homo ... 35 0.054
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 35 0.092
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 35 0.092
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 35 0.092
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 34 0.12
gi|223633890 hypothetical protein LOC729956 [Homo sapiens] 33 0.35
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 32 0.46
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 32 0.46
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 32 0.46
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 32 0.59
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 32 0.59
gi|148762982 hypothetical protein LOC387640 [Homo sapiens] 32 0.78
gi|151301154 mucin 6, gastric [Homo sapiens] 31 1.0
gi|110349786 Alstrom syndrome 1 [Homo sapiens] 31 1.3
gi|239735603 POM121 membrane glycoprotein-like 12 [Homo sapiens] 30 1.7
gi|154800453 tastin isoform 1 [Homo sapiens] 30 1.7
gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens] 30 2.3
gi|194328779 aspartate beta-hydroxylase domain containing 2 [Hom... 30 2.3
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 30 3.0
gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo ... 30 3.0
gi|14249452 zinc finger CCCH-type containing 10 [Homo sapiens] 30 3.0
gi|239754211 PREDICTED: hypothetical protein XP_002345911 [Homo ... 29 3.9
gi|195963410 MEF2 activating motif and SAP domain containing tra... 29 3.9
gi|32698970 MEF2 activating motif and SAP domain containing tran... 29 3.9
gi|59938776 cAMP responsive element binding protein 5 isoform de... 29 3.9
gi|59938774 cAMP responsive element binding protein 5 isoform be... 29 3.9
gi|59938772 cAMP responsive element binding protein 5 isoform ga... 29 3.9
>gi|239757736 PREDICTED: hypothetical protein [Homo sapiens]
Length = 273
Score = 567 bits (1462), Expect = e-162
Identities = 273/273 (100%), Positives = 273/273 (100%)
Query: 1 MDTDMTRALGSLARALPTARQPLHFRLKGAGRVCHARPVLHVDLDGATARRVMNPAGQGG 60
MDTDMTRALGSLARALPTARQPLHFRLKGAGRVCHARPVLHVDLDGATARRVMNPAGQGG
Sbjct: 1 MDTDMTRALGSLARALPTARQPLHFRLKGAGRVCHARPVLHVDLDGATARRVMNPAGQGG 60
Query: 61 SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS 120
SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS
Sbjct: 61 SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS 120
Query: 121 LSIPLMRGEQMQLALSKELALPHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLYHNGPS 180
LSIPLMRGEQMQLALSKELALPHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLYHNGPS
Sbjct: 121 LSIPLMRGEQMQLALSKELALPHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLYHNGPS 180
Query: 181 PTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLF 240
PTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLF
Sbjct: 181 PTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLF 240
Query: 241 LSCPPATPSASPGPPAHSIPVLTTVSFSTHIQG 273
LSCPPATPSASPGPPAHSIPVLTTVSFSTHIQG
Sbjct: 241 LSCPPATPSASPGPPAHSIPVLTTVSFSTHIQG 273
>gi|239752235 PREDICTED: hypothetical protein XP_002348167 [Homo
sapiens]
Length = 273
Score = 564 bits (1453), Expect = e-161
Identities = 271/273 (99%), Positives = 272/273 (99%)
Query: 1 MDTDMTRALGSLARALPTARQPLHFRLKGAGRVCHARPVLHVDLDGATARRVMNPAGQGG 60
MDTDMTR LGSLARALPTARQPLHFRLKGAGRVCHARPVLHVDLDGATARRVMNPAGQGG
Sbjct: 1 MDTDMTRTLGSLARALPTARQPLHFRLKGAGRVCHARPVLHVDLDGATARRVMNPAGQGG 60
Query: 61 SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS 120
SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS
Sbjct: 61 SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS 120
Query: 121 LSIPLMRGEQMQLALSKELALPHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLYHNGPS 180
LSIPLMRGEQMQLALSKELALPHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVL+HNGPS
Sbjct: 121 LSIPLMRGEQMQLALSKELALPHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLHHNGPS 180
Query: 181 PTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLF 240
PTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLF
Sbjct: 181 PTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLF 240
Query: 241 LSCPPATPSASPGPPAHSIPVLTTVSFSTHIQG 273
LSCPPATPSASPGPPAHSIPVLTTVSFSTHIQG
Sbjct: 241 LSCPPATPSASPGPPAHSIPVLTTVSFSTHIQG 273
>gi|13899269 SRY-box 7 [Homo sapiens]
Length = 388
Score = 35.8 bits (81), Expect = 0.041
Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 180 SPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSP-ESLKSPQ 238
SP +E P PH+P HP S E+A S H + L QSP S+ SP
Sbjct: 222 SPCQEEHGHPRRIPHLPGHP-------YSPEYAPSPLHCSHPLGSLALGQSPGVSMMSP- 273
Query: 239 LFLSCPPATPSASPGP--PAHS 258
CPP+ SP P HS
Sbjct: 274 -VPGCPPSPAYYSPATYHPLHS 294
>gi|239747084 PREDICTED: hypothetical protein XP_002343912 [Homo
sapiens]
Length = 313
Score = 35.4 bits (80), Expect = 0.054
Identities = 35/133 (26%), Positives = 51/133 (38%), Gaps = 22/133 (16%)
Query: 161 CGPLQQKHHTYHVLY----------HNGPSPTHQEDAEP-LLSPHIP----EHPENNVRA 205
CG L++ H + +LY H G ED P LL P P +HP +
Sbjct: 15 CG-LREAHTGHRILYMIKLLPESQLHGGGDDRTSEDVPPKLLRPSTPWDATKHPPGSFFP 73
Query: 206 CRSDEHALSTS-HAGLKVQGSRLMQSPESLKS-----PQLFLSCPPATPSASPGPPAHSI 259
+ A+ S G+K + R +SP S P P A P A+P PP
Sbjct: 74 SAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNRPARVPDSPAARPGAAPSPPERWA 133
Query: 260 PVLTTVSFSTHIQ 272
++F + +Q
Sbjct: 134 DFAVNLNFPSRLQ 146
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 34.7 bits (78), Expect = 0.092
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 10/90 (11%)
Query: 177 NGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKS 236
N P+P A P S P P ++ S Q+P S +
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSA----------PPETTAAPPTPSATTQAPPSSSA 207
Query: 237 PQLFLSCPPATPSASPGPPAHSIPVLTTVS 266
P + PP P+ +P PP+ S P TT +
Sbjct: 208 PPETTAAPPTPPATTPAPPSSSAPPETTAA 237
Score = 29.3 bits (64), Expect = 3.9
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 215 TSHAGLKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPPAHSIPVLTTVS 266
+S + S +P + +PQ + PP + +P PP+ S P TT +
Sbjct: 140 SSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAA 191
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 34.7 bits (78), Expect = 0.092
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 10/90 (11%)
Query: 177 NGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKS 236
N P+P A P S P P ++ S Q+P S +
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSA----------PPETTAAPPTPSATTQAPPSSSA 207
Query: 237 PQLFLSCPPATPSASPGPPAHSIPVLTTVS 266
P + PP P+ +P PP+ S P TT +
Sbjct: 208 PPETTAAPPTPPATTPAPPSSSAPPETTAA 237
Score = 29.3 bits (64), Expect = 3.9
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 215 TSHAGLKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPPAHSIPVLTTVS 266
+S + S +P + +PQ + PP + +P PP+ S P TT +
Sbjct: 140 SSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAA 191
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 34.7 bits (78), Expect = 0.092
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 10/90 (11%)
Query: 177 NGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKS 236
N P+P A P S P P ++ S Q+P S +
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSA----------PPETTAAPPTPSATTQAPPSSSA 207
Query: 237 PQLFLSCPPATPSASPGPPAHSIPVLTTVS 266
P + PP P+ +P PP+ S P TT +
Sbjct: 208 PPETTAAPPTPPATTPAPPSSSAPPETTAA 237
Score = 29.3 bits (64), Expect = 3.9
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 215 TSHAGLKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPPAHSIPVLTTVS 266
+S + S +P + +PQ + PP + +P PP+ S P TT +
Sbjct: 140 SSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAA 191
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 34.3 bits (77), Expect = 0.12
Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 6/119 (5%)
Query: 159 GQCGPLQQKHHTYHVLYHNGPSPTHQEDAEP---LLSPHIPEHPENNVRACRSDEHALST 215
G P +Q+ H L H P P A P L P P P S +T
Sbjct: 296 GSAPPERQEQR--HSLPHPYPYPAPAYTAHPPGHRLVPAAPPGPGPRPPGAESHGCLPAT 353
Query: 216 SHAGLKVQGSRLMQSP-ESLKSPQLFLSCPPATPSASPGPPAHSIPVLTTVSFSTHIQG 273
G ++ SR+ +S +S SP +C P PS PG P + ++ S +T ++G
Sbjct: 354 RPPGSDLRESRVQRSRMDSSVSPAATTACVPYAPSRPPGLPGTTTSSSSSSSSNTGLRG 412
>gi|223633890 hypothetical protein LOC729956 [Homo sapiens]
Length = 538
Score = 32.7 bits (73), Expect = 0.35
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 199 PENNVRACRSDEHALSTS----------HAGLKVQGSRLMQSPESLKSPQLFLSCPPATP 248
P N R S EH L A L Q L+ SPE+L+ + L PP +P
Sbjct: 376 PAPNPRRVMSQEHLLGDGGRSRYEFTLPRARLVSQEHLLLSSPEALRQSREHLLSPPRSP 435
Query: 249 SASPGPPAHS 258
+ P P A +
Sbjct: 436 ALPPDPTARA 445
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 32.3 bits (72), Expect = 0.46
Identities = 35/135 (25%), Positives = 41/135 (30%), Gaps = 7/135 (5%)
Query: 142 PHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLYHNGPSPTHQEDAEPLLSPHIPEHPEN 201
PH P L L G G H L+ GP H A PLL P P
Sbjct: 260 PHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFG 319
Query: 202 NVRACRSDEHALSTS------HAGLKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPP 255
+ L TS H L++ S+ + Q P A P P PP
Sbjct: 320 LPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP-PP 378
Query: 256 AHSIPVLTTVSFSTH 270
IP L H
Sbjct: 379 TTPIPQLPAPQAHKH 393
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 32.3 bits (72), Expect = 0.46
Identities = 35/135 (25%), Positives = 41/135 (30%), Gaps = 7/135 (5%)
Query: 142 PHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLYHNGPSPTHQEDAEPLLSPHIPEHPEN 201
PH P L L G G H L+ GP H A PLL P P
Sbjct: 814 PHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFG 873
Query: 202 NVRACRSDEHALSTS------HAGLKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPP 255
+ L TS H L++ S+ + Q P A P P PP
Sbjct: 874 LPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP-PP 932
Query: 256 AHSIPVLTTVSFSTH 270
IP L H
Sbjct: 933 TTPIPQLPAPQAHKH 947
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 32.3 bits (72), Expect = 0.46
Identities = 35/135 (25%), Positives = 41/135 (30%), Gaps = 7/135 (5%)
Query: 142 PHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLYHNGPSPTHQEDAEPLLSPHIPEHPEN 201
PH P L L G G H L+ GP H A PLL P P
Sbjct: 814 PHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFG 873
Query: 202 NVRACRSDEHALSTS------HAGLKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPP 255
+ L TS H L++ S+ + Q P A P P PP
Sbjct: 874 LPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP-PP 932
Query: 256 AHSIPVLTTVSFSTH 270
IP L H
Sbjct: 933 TTPIPQLPAPQAHKH 947
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 32.0 bits (71), Expect = 0.59
Identities = 49/207 (23%), Positives = 75/207 (36%), Gaps = 15/207 (7%)
Query: 61 SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS 120
S + H + R K +PP R G++ Q ++ G+ EP + R +P++ G
Sbjct: 100 SLSPHQERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGR 159
Query: 121 LSIPLMRGEQMQLALSKELALPHQEA--VPRWLWVLLGLWGQCGPLQQKHHTYHVLYHNG 178
LS P G Q P + + VPR GQ + + H L G
Sbjct: 160 LSAPPRHGPHPQSFRRPSAHPPGRGSGRVPR---------GQPEQQAWEQRSSHFLAPEG 210
Query: 179 PSPTHQEDAEPLLSPH-IPEHPENNVRACRSDEHALSTSHAGLKVQG--SRLMQSPESLK 235
+ A+P +P P E R A + G Q +RL+ +
Sbjct: 211 SVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSL 270
Query: 236 SPQLFLSCPPATPS-ASPGPPAHSIPV 261
+ L S PP P S PP + P+
Sbjct: 271 AASLARSPPPLQPRLGSASPPRLAAPL 297
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 32.0 bits (71), Expect = 0.59
Identities = 49/207 (23%), Positives = 75/207 (36%), Gaps = 15/207 (7%)
Query: 61 SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS 120
S + H + R K +PP R G++ Q ++ G+ EP + R +P++ G
Sbjct: 100 SLSPHQERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGR 159
Query: 121 LSIPLMRGEQMQLALSKELALPHQEA--VPRWLWVLLGLWGQCGPLQQKHHTYHVLYHNG 178
LS P G Q P + + VPR GQ + + H L G
Sbjct: 160 LSAPPRHGPHPQSFRRPSAHPPGRGSGRVPR---------GQPEQQAWEQRSSHFLAPEG 210
Query: 179 PSPTHQEDAEPLLSPH-IPEHPENNVRACRSDEHALSTSHAGLKVQG--SRLMQSPESLK 235
+ A+P +P P E R A + G Q +RL+ +
Sbjct: 211 SVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSL 270
Query: 236 SPQLFLSCPPATPS-ASPGPPAHSIPV 261
+ L S PP P S PP + P+
Sbjct: 271 AASLARSPPPLQPRLGSASPPRLAAPL 297
>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
Length = 908
Score = 31.6 bits (70), Expect = 0.78
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 11/87 (12%)
Query: 159 GQCGPLQQKHHTYHVLYHN-----GPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHAL 213
G C P HH +H +H+ P +H PH+ PE +C SD +
Sbjct: 331 GFCPPPHHHHHHHHHHHHHHHRAQPPQQSHHPPHHHRPQPHLGSFPE----SCSSDSESS 386
Query: 214 STS-HAGLKVQ-GSRLMQSPESLKSPQ 238
S S HA GS L S S+ S +
Sbjct: 387 SYSDHAANDSDFGSSLSSSSNSVSSEE 413
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 31.2 bits (69), Expect = 1.0
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 18/98 (18%)
Query: 179 PSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSR------LMQSPE 232
P+P+H E P H+P P + S ++ +HA + S + P
Sbjct: 1434 PTPSHPETTLPT---HVP--PFSTSLVTPSTHTVITPTHAQMATSASNHSAPTGTIPPPT 1488
Query: 233 SLKSPQLFLSCPPATPSASPGPPAHSIPVLTTVSFSTH 270
+LK+ + PP TP+ S AHS SFST+
Sbjct: 1489 TLKATGSTHTAPPITPTTSGTSQAHS-------SFSTN 1519
>gi|110349786 Alstrom syndrome 1 [Homo sapiens]
Length = 4169
Score = 30.8 bits (68), Expect = 1.3
Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 172 HVLYHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSD--EHALSTSHAGLKVQGSRLMQ 229
HV H+ PSP HQ+ P L I C++ +H + +H+ L QG +
Sbjct: 2900 HVRKHHSPSPQHQDYVAPDLPSCIFLEQRELFEQCKAPYVDHQMRENHSPLP-QGQDSIA 2958
Query: 230 SPESLKSPQLFLSCPPATPSASPGPPAHSIPV 261
S L SP C P H P+
Sbjct: 2959 S--DLPSPISLEQCQSKAPGVDDQMNKHHFPL 2988
>gi|239735603 POM121 membrane glycoprotein-like 12 [Homo sapiens]
Length = 296
Score = 30.4 bits (67), Expect = 1.7
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 224 GSRLMQSPESLKSPQLFLSCPPATPSASPGPPAHSIPVLTTVSFSTHIQ 272
G L+Q P++L +P +S P+TP +P P P +HIQ
Sbjct: 19 GEPLLQGPDALAAP---MSRSPSTPQTTPSPQGRQSPWPLRSLTQSHIQ 64
>gi|154800453 tastin isoform 1 [Homo sapiens]
Length = 778
Score = 30.4 bits (67), Expect = 1.7
Identities = 32/99 (32%), Positives = 36/99 (36%), Gaps = 29/99 (29%)
Query: 159 GQCGPLQQKHHTYHVLYHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHA 218
GQC PL NG S + +PLL+ R + EH TSH
Sbjct: 452 GQCVPL------------NGGSSLDMVELQPLLT--------EISRTLNATEHNSGTSHL 491
Query: 219 G--LKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPP 255
LK G PE PQ CPP A PGPP
Sbjct: 492 PGLLKHSGLPKPCLPEECGEPQ---PCPP----AEPGPP 523
>gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens]
Length = 1049
Score = 30.0 bits (66), Expect = 2.3
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 19/92 (20%)
Query: 185 EDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLFLSCP 244
ED+ LSP P E+ A E +S S SP + +P F S
Sbjct: 189 EDSSDALSPDQPASQESQGSAASPSEPKVSES------------PSPVTTNTPAQFASVS 236
Query: 245 PATP-------SASPGPPAHSIPVLTTVSFST 269
P P +A PP + PVL T + S+
Sbjct: 237 PTVPEFLKTPPTADQPPPRPAAPVLPTNTVSS 268
>gi|194328779 aspartate beta-hydroxylase domain containing 2 [Homo
sapiens]
Length = 369
Score = 30.0 bits (66), Expect = 2.3
Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 182 THQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLFL 241
TH E L ++ E+ A R + H G++ QG L P K FL
Sbjct: 117 THNEGLNQKLYHNLQEY------AKRYSWSGMGRIHKGIREQGRYLNSRPSIQKPEVFFL 170
Query: 242 SCPPATPSASPGPPAHSIPVL 262
P TP S H + VL
Sbjct: 171 PDLPTTPYFSRDAQKHDVEVL 191
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 29.6 bits (65), Expect = 3.0
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 19/107 (17%)
Query: 179 PSPTHQEDA----EPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQS---- 230
P PT D P ++PH P P + H + +H+ + + Q
Sbjct: 1155 PDPTMAPDPITTLNPTVTPHFPTTPHPT-----TTPHPTTITHSTMIPDPTTTPQPFTTI 1209
Query: 231 ------PESLKSPQLFLSCPPATPSASPGPPAHSIPVLTTVSFSTHI 271
P+ +PQ F + P T S P + P TT++ ST I
Sbjct: 1210 THSTMIPDPTTTPQPFTTMQPTTTPHSTTPHPTTTPHPTTITHSTMI 1256
>gi|239741939 PREDICTED: hypothetical protein XP_002342358 [Homo
sapiens]
Length = 389
Score = 29.6 bits (65), Expect = 3.0
Identities = 52/210 (24%), Positives = 73/210 (34%), Gaps = 17/210 (8%)
Query: 66 HDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGSLSIPL 125
HD Q S PPR + R ++ + H G+ + P L R S P
Sbjct: 89 HDPQTGTSAPPRVSSCTTRKLEHQPHSGSPAAPPSNCNISSPPGLQLHDPQTR--TSAPP 146
Query: 126 MRGEQMQLALSKELALPHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLYHNGPSPTHQE 185
L L +L P W++ G Q H + + Q
Sbjct: 147 RVSSCKALKLEHQLPAGSPAGRPS-NWIISSPQGL-----QLHSPKTETVSSCKALKRQH 200
Query: 186 DAEPLLSPHI---PEH--PENNVRACRSDEHALSTSHAGLKVQGSRL-MQSPESLK--SP 237
P +S PEH P + A S + S + Q S + SP+ L+ P
Sbjct: 201 QLPPRVSSCTTLKPEHQLPPGSPAAWPSSCNISSPPVSSCTPQPSNWNISSPQGLQLHDP 260
Query: 238 QLFLSCPPATPSASPGPPAHSIPVLTTVSF 267
Q S PP +P+ PG PA S P +SF
Sbjct: 261 QTGTSAPPGSPALLPGSPA-SRPSNWIISF 289
>gi|14249452 zinc finger CCCH-type containing 10 [Homo sapiens]
Length = 434
Score = 29.6 bits (65), Expect = 3.0
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 211 HALSTSHAGLKVQGSRLMQ-SPESLKSPQLFLSCPP---ATPSASPGPPAHSIPVLTTVS 266
H ++ +H L Q + S + L +P + PP A P+A P PP H P +T +S
Sbjct: 307 HGIAQTHTTLSSQALQPRPVSQQELVAPAGAPAAPPTNAAPPAAPPPPPPHLTPEITPLS 366
>gi|239754211 PREDICTED: hypothetical protein XP_002345911 [Homo
sapiens]
Length = 131
Score = 29.3 bits (64), Expect = 3.9
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 214 STSHAGLKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPPAHSIP 260
+T G GS P ++ P CP ATPSA P P H P
Sbjct: 54 ATMVTGRVAAGSAHALRPSAVPGPL----CPEATPSAPPTSPLHPAP 96
>gi|195963410 MEF2 activating motif and SAP domain containing
transcriptional regulator isoform 1 [Homo sapiens]
Length = 415
Score = 29.3 bits (64), Expect = 3.9
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 229 QSPESLKSPQLFLSCPPATPSASPGPPAHSIPVLT 263
Q P P CPP P SP PP H + + T
Sbjct: 137 QQPHPRMKPSPLTPCPPGVP--SPSPPPHKLELQT 169
>gi|32698970 MEF2 activating motif and SAP domain containing
transcriptional regulator isoform 2 [Homo sapiens]
Length = 312
Score = 29.3 bits (64), Expect = 3.9
Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 229 QSPESLKSPQLFLSCPPATPSASPGPPAHSIPVLT 263
Q P P CPP P SP PP H + + T
Sbjct: 34 QQPHPRMKPSPLTPCPPGVP--SPSPPPHKLELQT 66
>gi|59938776 cAMP responsive element binding protein 5 isoform delta
[Homo sapiens]
Length = 369
Score = 29.3 bits (64), Expect = 3.9
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 163 PLQQKHHTYHVLYHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKV 222
P Q HH + +H+ S H A SPH P H N + S A ++
Sbjct: 162 PHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQ----------VSPATQQM 211
Query: 223 QGSRLMQSPE 232
Q ++ +Q P+
Sbjct: 212 QPTQTIQPPQ 221
>gi|59938774 cAMP responsive element binding protein 5 isoform beta
[Homo sapiens]
Length = 501
Score = 29.3 bits (64), Expect = 3.9
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 163 PLQQKHHTYHVLYHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKV 222
P Q HH + +H+ S H A SPH P H N + S A ++
Sbjct: 294 PHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQ----------VSPATQQM 343
Query: 223 QGSRLMQSPE 232
Q ++ +Q P+
Sbjct: 344 QPTQTIQPPQ 353
>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
[Homo sapiens]
Length = 475
Score = 29.3 bits (64), Expect = 3.9
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 163 PLQQKHHTYHVLYHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKV 222
P Q HH + +H+ S H A SPH P H N + S A ++
Sbjct: 268 PHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQ----------VSPATQQM 317
Query: 223 QGSRLMQSPE 232
Q ++ +Q P+
Sbjct: 318 QPTQTIQPPQ 327
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,315,339
Number of Sequences: 37866
Number of extensions: 705366
Number of successful extensions: 3812
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 3696
Number of HSP's gapped (non-prelim): 143
length of query: 273
length of database: 18,247,518
effective HSP length: 101
effective length of query: 172
effective length of database: 14,423,052
effective search space: 2480764944
effective search space used: 2480764944
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.