BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239757369 PREDICTED: hypothetical protein [Homo sapiens] (188 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239757369 PREDICTED: hypothetical protein [Homo sapiens] 374 e-104 gi|239751917 PREDICTED: hypothetical protein [Homo sapiens] 374 e-104 gi|239746407 PREDICTED: hypothetical protein XP_002343705 [Homo ... 374 e-104 gi|85068578 intercellular adhesion molecule 4 isoform 3 precurso... 35 0.029 gi|4504561 intercellular adhesion molecule 4 isoform 1 precursor... 35 0.029 gi|12545402 intercellular adhesion molecule 4 isoform 2 precurso... 35 0.029 gi|169160919 PREDICTED: hypothetical protein [Homo sapiens] 35 0.050 gi|169162159 PREDICTED: hypothetical protein [Homo sapiens] 35 0.050 gi|169161152 PREDICTED: hypothetical protein [Homo sapiens] 35 0.050 gi|145699105 connexin40.1 [Homo sapiens] 33 0.14 gi|239757110 PREDICTED: hypothetical protein [Homo sapiens] 33 0.19 gi|169790811 SHC (Src homology 2 domain containing) transforming... 31 0.55 gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo ... 30 0.94 gi|118918405 SAC3 domain containing 1 [Homo sapiens] 30 0.94 gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 30 1.2 gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo ... 30 1.2 gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 30 1.2 gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo ... 30 1.2 gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 30 1.2 gi|218505833 TRAF4 associated factor 1 isoform c [Homo sapiens] 30 1.2 gi|218505831 TRAF4 associated factor 1 isoform b [Homo sapiens] 30 1.2 gi|218505827 TRAF4 associated factor 1 isoform a [Homo sapiens] 30 1.2 gi|229577273 BUD13 homolog isoform 2 [Homo sapiens] 30 1.6 gi|14249338 BUD13 homolog isoform 1 [Homo sapiens] 30 1.6 gi|239754516 PREDICTED: hypothetical protein [Homo sapiens] 29 2.1 gi|123701326 zinc finger protein 831 [Homo sapiens] 29 2.1 gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens] 29 2.1 gi|239748707 PREDICTED: hypothetical protein XP_002346778 [Homo ... 29 2.7 gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo ... 29 2.7 gi|239742733 PREDICTED: hypothetical protein XP_002342624 [Homo ... 29 2.7 >gi|239757369 PREDICTED: hypothetical protein [Homo sapiens] Length = 188 Score = 374 bits (959), Expect = e-104 Identities = 188/188 (100%), Positives = 188/188 (100%) Query: 1 MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI 60 MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI Sbjct: 1 MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI 60 Query: 61 LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI 120 LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI Sbjct: 61 LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI 120 Query: 121 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS 180 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS Sbjct: 121 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS 180 Query: 181 VRLGKLIP 188 VRLGKLIP Sbjct: 181 VRLGKLIP 188 >gi|239751917 PREDICTED: hypothetical protein [Homo sapiens] Length = 188 Score = 374 bits (959), Expect = e-104 Identities = 188/188 (100%), Positives = 188/188 (100%) Query: 1 MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI 60 MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI Sbjct: 1 MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI 60 Query: 61 LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI 120 LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI Sbjct: 61 LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI 120 Query: 121 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS 180 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS Sbjct: 121 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS 180 Query: 181 VRLGKLIP 188 VRLGKLIP Sbjct: 181 VRLGKLIP 188 >gi|239746407 PREDICTED: hypothetical protein XP_002343705 [Homo sapiens] Length = 188 Score = 374 bits (959), Expect = e-104 Identities = 188/188 (100%), Positives = 188/188 (100%) Query: 1 MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI 60 MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI Sbjct: 1 MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI 60 Query: 61 LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI 120 LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI Sbjct: 61 LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI 120 Query: 121 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS 180 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS Sbjct: 121 GKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSVQPGGS 180 Query: 181 VRLGKLIP 188 VRLGKLIP Sbjct: 181 VRLGKLIP 188 >gi|85068578 intercellular adhesion molecule 4 isoform 3 precursor [Homo sapiens] Length = 272 Score = 35.4 bits (80), Expect = 0.029 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 16/78 (20%) Query: 106 PRLLFLLLSGARRGIGKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWI 165 P L L+ A G+G + R R + Q P+G L APS P FW + + Sbjct: 6 PLSLLFFLAAAYPGVGSALGR---RTKRAQSPKGSPL---APSGTSVP--FWVRMS---- 53 Query: 166 SFHQPEFLSVQPGGSVRL 183 PEF++VQPG SV+L Sbjct: 54 ----PEFVAVQPGKSVQL 67 >gi|4504561 intercellular adhesion molecule 4 isoform 1 precursor [Homo sapiens] Length = 271 Score = 35.4 bits (80), Expect = 0.029 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 16/78 (20%) Query: 106 PRLLFLLLSGARRGIGKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWI 165 P L L+ A G+G + R R + Q P+G L APS P FW + + Sbjct: 6 PLSLLFFLAAAYPGVGSALGR---RTKRAQSPKGSPL---APSGTSVP--FWVRMS---- 53 Query: 166 SFHQPEFLSVQPGGSVRL 183 PEF++VQPG SV+L Sbjct: 54 ----PEFVAVQPGKSVQL 67 >gi|12545402 intercellular adhesion molecule 4 isoform 2 precursor [Homo sapiens] Length = 237 Score = 35.4 bits (80), Expect = 0.029 Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 16/78 (20%) Query: 106 PRLLFLLLSGARRGIGKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWI 165 P L L+ A G+G + R R + Q P+G L APS P FW + + Sbjct: 6 PLSLLFFLAAAYPGVGSALGR---RTKRAQSPKGSPL---APSGTSVP--FWVRMS---- 53 Query: 166 SFHQPEFLSVQPGGSVRL 183 PEF++VQPG SV+L Sbjct: 54 ----PEFVAVQPGKSVQL 67 >gi|169160919 PREDICTED: hypothetical protein [Homo sapiens] Length = 404 Score = 34.7 bits (78), Expect = 0.050 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 3 AVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEA-LPVPIL 61 A+VLHQVR P E L ALA + L A LV + + A GAR L A + P+L Sbjct: 282 ALVLHQVRAPAEALAALATAVRLLARVDALVVGQMRAEAEGLAALGARVGLLARVQAPVL 341 Score = 30.0 bits (66), Expect = 1.2 Identities = 21/53 (39%), Positives = 24/53 (45%) Query: 3 AVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEA 55 A V+HQVR E LPALAA +G LV + A GA L A Sbjct: 226 AQVVHQVRVTPEALPALAAHVGPLTRVRALVREEVRADAEGLAALGAHVGLLA 278 >gi|169162159 PREDICTED: hypothetical protein [Homo sapiens] Length = 404 Score = 34.7 bits (78), Expect = 0.050 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 3 AVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEA-LPVPIL 61 A+VLHQVR P E L ALA + L A LV + + A GAR L A + P+L Sbjct: 282 ALVLHQVRAPAEALAALATAVRLLARVDALVVGQMRAEAEGLAALGARVGLLARVQAPVL 341 Score = 30.0 bits (66), Expect = 1.2 Identities = 21/53 (39%), Positives = 24/53 (45%) Query: 3 AVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEA 55 A V+HQVR E LPALAA +G LV + A GA L A Sbjct: 226 AQVVHQVRVTPEALPALAAHVGPLTRVRALVREEVRADAEGLAALGAHVGLLA 278 >gi|169161152 PREDICTED: hypothetical protein [Homo sapiens] Length = 404 Score = 34.7 bits (78), Expect = 0.050 Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 3 AVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEA-LPVPIL 61 A+VLHQVR P E L ALA + L A LV + + A GAR L A + P+L Sbjct: 282 ALVLHQVRAPAEALAALATAVRLLARVDALVVGQMRAEAEGLAALGARVGLLARVQAPVL 341 Score = 30.0 bits (66), Expect = 1.2 Identities = 21/53 (39%), Positives = 24/53 (45%) Query: 3 AVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEA 55 A V+HQVR E LPALAA +G LV + A GA L A Sbjct: 226 AQVVHQVRVTPEALPALAAHVGPLTRVRALVREEVRADAEGLAALGAHVGLLA 278 >gi|145699105 connexin40.1 [Homo sapiens] Length = 370 Score = 33.1 bits (74), Expect = 0.14 Identities = 31/96 (32%), Positives = 41/96 (42%), Gaps = 12/96 (12%) Query: 71 RRAPVRGRLLDDGLPLRSGGRVGLRVLG----VLRVRGLPRLL----FLLLSGARRGIGK 122 RR G ++G P G R G G RV G ++ + S A +G+ Sbjct: 249 RRTDEEGGREEEGAPAPPGARAGGEGAGSPRRTSRVSGHTKIPDEDESEVTSSASEKLGR 308 Query: 123 GVPRGRLRRQLRQHPRGGG---LLAGAPSALLPPPA 155 PRGR R+ Q PRG G + APS L PP+ Sbjct: 309 Q-PRGRPHREAAQDPRGSGSEEQPSAAPSRLAAPPS 343 >gi|239757110 PREDICTED: hypothetical protein [Homo sapiens] Length = 192 Score = 32.7 bits (73), Expect = 0.19 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 118 RGIGKGVPRGRLRRQLRQHPRGGGLLAG-APSALLPPPAFWNKA 160 RG G+G RG + +Q R P L G AP+ PPPA+W A Sbjct: 115 RGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWA 158 >gi|169790811 SHC (Src homology 2 domain containing) transforming protein 2 [Homo sapiens] Length = 582 Score = 31.2 bits (69), Expect = 0.55 Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 7/94 (7%) Query: 15 GLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPILGVRPLGSQ----- 69 G+PALAA + L A + R +P LP L C AG+R + G ++ Sbjct: 71 GVPALAAAV-LGACEPRCAAPCPLPALSRCRGAGSRGSRGGRGAAGSGDAAAAAEWIRKG 129 Query: 70 -FRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRV 102 F P G L D L G +R +G + V Sbjct: 130 SFIHKPAHGWLHPDARVLGPGVSYVVRYMGCIEV 163 >gi|239751877 PREDICTED: hypothetical protein XP_002348035 [Homo sapiens] Length = 944 Score = 30.4 bits (67), Expect = 0.94 Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 5/145 (3%) Query: 1 MAAVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPI 60 +A ++ + + REG A AA LPAG V P +P +A + +A Sbjct: 565 VALLMRQEAGQLREGAVAAAAAERLPAGSPVAVLVAGEPSHRPEGLAAGQTG-KARRGGG 623 Query: 61 LGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGI 120 G R L + R GRL G L G R+G VL+ + L L A + Sbjct: 624 GGRRGLRQRGRWLVGLGRL--GGCLLGLGRRIGPGARLVLQEQLLAAESLLAAIAAVHQL 681 Query: 121 GKGVPRGRLRRQLRQHPRGGGLLAG 145 +G+ R +++LR H RG G G Sbjct: 682 HRGL--RRRQKELRHHGRGRGRRGG 704 Score = 29.6 bits (65), Expect = 1.6 Identities = 20/48 (41%), Positives = 26/48 (54%) Query: 3 AVVLHQVREPREGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGAR 50 A+VL QV RE LPA + G+G AG V+P+A L+ AR Sbjct: 777 ALVLPQVGALREALPADSTGVGPLAGVHVAVAPQAGRVLEGLGAVRAR 824 >gi|118918405 SAC3 domain containing 1 [Homo sapiens] Length = 358 Score = 30.4 bits (67), Expect = 0.94 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 15/94 (15%) Query: 3 AVVLHQVREPREGLPALAAGIGLPAGQAR----LVSPRALPGLQPCAVAGARDALEALPV 58 AV H RE L A P GQ +V+ AL GL+ ARD +A + Sbjct: 245 AVQCHVGHARREALARFARAFSTPKGQTLPLGFMVNLLALDGLRE-----ARDLCQAHGL 299 Query: 59 PILGVRPLGSQFRRAPVRGRLLDDGLPLRSGGRV 92 P+ G + R +RGR +++GLP S +V Sbjct: 300 PLDG------EERVVFLRGRYVEEGLPPASTCKV 327 >gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] Length = 346 Score = 30.0 bits (66), Expect = 1.2 Identities = 44/145 (30%), Positives = 52/145 (35%), Gaps = 17/145 (11%) Query: 18 ALAAGIGLPAGQARLVSPR----ALPGLQPCAVAGARDAL----EALPVPILGVRPLGSQ 69 A AA GL A ARL P PG P A A A DAL A P + P ++ Sbjct: 191 AAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTR 250 Query: 70 FRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGIGKGVPRGRL 129 R+ P R R L G RG P L LS + + R Sbjct: 251 PRKHPERTRRPAQRLESGCRGHCS---------RGAPALAPPKLSPPFPCLAQSASRAAG 301 Query: 130 RRQLRQHPRGGGLLAGAPSALLPPP 154 R+ RG L G+ S LP P Sbjct: 302 ARRALSASRGRRGLLGSGSLALPLP 326 >gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo sapiens] Length = 492 Score = 30.0 bits (66), Expect = 1.2 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 114 SGARRGIGKGV--PRGRLRRQLRQHPRGGGLLAGAPSALLPPPAF 156 S RRG GV PR +L + +G G GAP +L PPP F Sbjct: 310 SAGRRGGTNGVATPREKLGGKRGVGRKGQGTRLGAPHSLPPPPPF 354 >gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] Length = 346 Score = 30.0 bits (66), Expect = 1.2 Identities = 44/145 (30%), Positives = 52/145 (35%), Gaps = 17/145 (11%) Query: 18 ALAAGIGLPAGQARLVSPR----ALPGLQPCAVAGARDAL----EALPVPILGVRPLGSQ 69 A AA GL A ARL P PG P A A A DAL A P + P ++ Sbjct: 191 AAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTR 250 Query: 70 FRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGIGKGVPRGRL 129 R+ P R R L G RG P L LS + + R Sbjct: 251 PRKHPERTRRPAQRLESGCRGHCS---------RGAPALAPPKLSPPFPCLAQSASRAAG 301 Query: 130 RRQLRQHPRGGGLLAGAPSALLPPP 154 R+ RG L G+ S LP P Sbjct: 302 ARRALSASRGRRGLLGSGSLALPLP 326 >gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo sapiens] Length = 492 Score = 30.0 bits (66), Expect = 1.2 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 114 SGARRGIGKGV--PRGRLRRQLRQHPRGGGLLAGAPSALLPPPAF 156 S RRG GV PR +L + +G G GAP +L PPP F Sbjct: 310 SAGRRGGTNGVATPREKLGGKRGVGRKGQGTRLGAPHSLPPPPPF 354 >gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] Length = 346 Score = 30.0 bits (66), Expect = 1.2 Identities = 44/145 (30%), Positives = 52/145 (35%), Gaps = 17/145 (11%) Query: 18 ALAAGIGLPAGQARLVSPR----ALPGLQPCAVAGARDAL----EALPVPILGVRPLGSQ 69 A AA GL A ARL P PG P A A A DAL A P + P ++ Sbjct: 191 AAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTEFLSPRRTR 250 Query: 70 FRRAPVRGRLLDDGLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRGIGKGVPRGRL 129 R+ P R R L G RG P L LS + + R Sbjct: 251 PRKHPERTRRPAQRLESGCRGHCS---------RGAPALAPPKLSPPFPCLAQSASRAAG 301 Query: 130 RRQLRQHPRGGGLLAGAPSALLPPP 154 R+ RG L G+ S LP P Sbjct: 302 ARRALSASRGRRGLLGSGSLALPLP 326 >gi|218505833 TRAF4 associated factor 1 isoform c [Homo sapiens] Length = 241 Score = 30.0 bits (66), Expect = 1.2 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 10/86 (11%) Query: 15 GLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEAL-----PVPILGVRPLGSQ 69 G +AAG L + R PG+QPC + ++ + P + G +P +Q Sbjct: 45 GGTTVAAGNLLNESEKDCGQDRRAPGVQPCRLVTMTSVVKTVYSLQPPSALSGGQPADTQ 104 Query: 70 FRRA-----PVRGRLLDDGLPLRSGG 90 R PVR + +D L SGG Sbjct: 105 TRATSKSLLPVRSKEVDVSKQLHSGG 130 >gi|218505831 TRAF4 associated factor 1 isoform b [Homo sapiens] Length = 286 Score = 30.0 bits (66), Expect = 1.2 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 10/86 (11%) Query: 15 GLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEAL-----PVPILGVRPLGSQ 69 G +AAG L + R PG+QPC + ++ + P + G +P +Q Sbjct: 45 GGTTVAAGNLLNESEKDCGQDRRAPGVQPCRLVTMTSVVKTVYSLQPPSALSGGQPADTQ 104 Query: 70 FRRA-----PVRGRLLDDGLPLRSGG 90 R PVR + +D L SGG Sbjct: 105 TRATSKSLLPVRSKEVDVSKQLHSGG 130 >gi|218505827 TRAF4 associated factor 1 isoform a [Homo sapiens] Length = 316 Score = 30.0 bits (66), Expect = 1.2 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 10/86 (11%) Query: 15 GLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEAL-----PVPILGVRPLGSQ 69 G +AAG L + R PG+QPC + ++ + P + G +P +Q Sbjct: 45 GGTTVAAGNLLNESEKDCGQDRRAPGVQPCRLVTMTSVVKTVYSLQPPSALSGGQPADTQ 104 Query: 70 FRRA-----PVRGRLLDDGLPLRSGG 90 R PVR + +D L SGG Sbjct: 105 TRATSKSLLPVRSKEVDVSKQLHSGG 130 >gi|229577273 BUD13 homolog isoform 2 [Homo sapiens] Length = 485 Score = 29.6 bits (65), Expect = 1.6 Identities = 14/29 (48%), Positives = 17/29 (58%) Query: 113 LSGARRGIGKGVPRGRLRRQLRQHPRGGG 141 LSGA G+ +G GR RR+ R P G G Sbjct: 17 LSGADAGVDRGSESGRKRRKKRPKPGGAG 45 >gi|14249338 BUD13 homolog isoform 1 [Homo sapiens] Length = 619 Score = 29.6 bits (65), Expect = 1.6 Identities = 14/29 (48%), Positives = 17/29 (58%) Query: 113 LSGARRGIGKGVPRGRLRRQLRQHPRGGG 141 LSGA G+ +G GR RR+ R P G G Sbjct: 17 LSGADAGVDRGSESGRKRRKKRPKPGGAG 45 >gi|239754516 PREDICTED: hypothetical protein [Homo sapiens] Length = 334 Score = 29.3 bits (64), Expect = 2.1 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 13/71 (18%) Query: 7 HQVREP-REGLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPILGVRP 65 H REP R G P A + +P L+ R+ P + CAV+G + AL Sbjct: 152 HLGREPPRGGGPRPPALVPVPLATPLLLEGRSEPSTRACAVSGRQAAL------------ 199 Query: 66 LGSQFRRAPVR 76 LG+ R AP R Sbjct: 200 LGAHVRPAPDR 210 >gi|123701326 zinc finger protein 831 [Homo sapiens] Length = 1677 Score = 29.3 bits (64), Expect = 2.1 Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 12/79 (15%) Query: 12 PREGLPALAAGI-GLPAGQAR---LVSPRALP---GLQPCAVAGARDALEALPVPILGVR 64 P PA G G P GQA + P LP GL P V L+ALP+P+ Sbjct: 12 PARDQPAPTPGPPGAPGGQASPHLTLGPVLLPPEQGLAPPTVF-----LKALPIPLYHTV 66 Query: 65 PLGSQFRRAPVRGRLLDDG 83 P G RAP+ LD G Sbjct: 67 PPGGLQPRAPLVTGSLDGG 85 >gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens] Length = 334 Score = 29.3 bits (64), Expect = 2.1 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Query: 29 QARLVSPRALPG-LQPCAVAGARDALEALPVPILG 62 Q RL+SP LP L PCA AL +P LG Sbjct: 184 QGRLLSPPGLPALLPPCATGALGSALRGPSLPALG 218 >gi|239748707 PREDICTED: hypothetical protein XP_002346778 [Homo sapiens] Length = 92 Score = 28.9 bits (63), Expect = 2.7 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 94 LRVLGVLRVRGLPRLLFLLLSGARRGIGKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPP 153 LR++ V RV+ + R L + G G+G P G+++ L R G G + PP Sbjct: 25 LRLMAV-RVKAVRRELLYVCFGETPGLGISQPLGQVQEGLHAGRRRGQRRPGLQVSQTPP 83 Query: 154 PA 155 P+ Sbjct: 84 PS 85 >gi|239744995 PREDICTED: hypothetical protein XP_002343325 [Homo sapiens] Length = 909 Score = 28.9 bits (63), Expect = 2.7 Identities = 53/196 (27%), Positives = 71/196 (36%), Gaps = 46/196 (23%) Query: 15 GLPALAAGIGLPAGQARLVSPRALPGLQPCAVAGARDALEALPVPILGVRPLGS--QFRR 72 G P+ + G A +RL RA G+Q R+ + A ++G P+ + R Sbjct: 632 GSPSPSLCDGRNASHSRLSKNRAQNGIQEAP----RERVPAALTAVVGQPPIPPPLELRS 687 Query: 73 APVRGRLLDD-----GLPLRSGGRVGLRVLGVLRVRGLPRLLFLLLSGARRG-------- 119 +R L + G LR GG VG++ G VRG P GA+ Sbjct: 688 VELRALLGPEVPGAVGAALRGGGEVGIQEGG---VRGPPTSRPARAQGAQESPLPAPSEP 744 Query: 120 ----IGKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPPPAFWNKAASLWISFHQPEFLSV 175 GK PR + P G LAG P A P QP S Sbjct: 745 PEAVEGKASPREQGEEGAPTQPCCG--LAGGPQA---GPT------------QQPAARSG 787 Query: 176 QPGGSV---RLGKLIP 188 P G + LGKL+P Sbjct: 788 HPNGEIGQEGLGKLVP 803 >gi|239742733 PREDICTED: hypothetical protein XP_002342624 [Homo sapiens] Length = 92 Score = 28.9 bits (63), Expect = 2.7 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Query: 94 LRVLGVLRVRGLPRLLFLLLSGARRGIGKGVPRGRLRRQLRQHPRGGGLLAGAPSALLPP 153 LR++ V RV+ + R L + G G+G P G+++ L R G G + PP Sbjct: 25 LRLMAV-RVKAVRRELLYVCFGETPGLGISQPLGQVQEGLHAGRRRGQRRPGLQVSQTPP 83 Query: 154 PA 155 P+ Sbjct: 84 PS 85 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.324 0.146 0.449 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,520,651 Number of Sequences: 37866 Number of extensions: 490752 Number of successful extensions: 1598 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 36 Number of HSP's that attempted gapping in prelim test: 1550 Number of HSP's gapped (non-prelim): 77 length of query: 188 length of database: 18,247,518 effective HSP length: 96 effective length of query: 92 effective length of database: 14,612,382 effective search space: 1344339144 effective search space used: 1344339144 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.