Guide to the Human Genome
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Name: LOC728752 Sequence: fasta or formatted (219aa) NCBI GI: 239757258
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt mRNA {219aa} PREDICTED: hypothetical protein
alt mRNA {219aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         12           1
 C cysteine            5.5         12           1
 D aspartate           4.6         10           1
 E glutamate           5.9         13           2
 F phenylalanine       2.3          5           1
 G glycine            10.0         22           3
 H histidine           1.4          3           1
 I isoleucine          1.4          3           1
 K lysine              5.9         13           1
 L leucine             8.7         19           2
 M methionine          1.4          3           1
 N asparagine          1.8          4           1
 P proline            11.9         26           2
 Q glutamine           4.1          9           1
 R arginine           10.5         23           3
 S serine              5.9         13           2
 T threonine           3.7          8           2
 V valine              5.9         13           1
 W tryptophan          1.8          4           1
 Y tyrosine            1.8          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC728752             1.000   PREDICTED: hypothetical protein 
LOC728752             1.000   PREDICTED: hypothetical protein 
SRRM2                 0.027   splicing coactivator subunit SRm300 
BCORL1                0.025   BCL6 co-repressor-like 1 
TCEB3B                0.022   elongin A2 
LOC729575             0.022   PREDICTED: hypothetical protein 
LOC100288110          0.022   PREDICTED: hypothetical protein 
LOC100288110          0.022   PREDICTED: hypothetical protein XP_002343007 
MLL2                  0.022   myeloid/lymphoid or mixed-lineage leukemia 2 
WBP11                 0.022   WW domain binding protein 11 
LOC100288439          0.020   PREDICTED: hypothetical protein 
LOC100288439          0.020   PREDICTED: hypothetical protein XP_002343141 
ZNF207                0.018   zinc finger protein 207 isoform c 
ZNF207                0.018   zinc finger protein 207 isoform b 
LOC390595             0.018   PREDICTED: similar to ubiquitin-associated protein ...
LOC390595             0.018   PREDICTED: similar to ubiquitin-associated protein ...
LOC390595             0.018   PREDICTED: hypothetical protein 
LOC375295             0.016   PREDICTED: hypothetical protein LOC375295 
LOC375295             0.016   PREDICTED: hypothetical protein LOC375295 
LOC375295             0.016   PREDICTED: hypothetical protein 
TRERF1                0.016   transcriptional regulating factor 1 
SEC24A                0.016   SEC24 related gene family, member A 
TCERG1                0.016   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.016   transcription elongation regulator 1 isoform 1 [Homo...
MLL4                  0.016   myeloid/lymphoid or mixed-lineage leukemia 4 
CAD                   0.016   carbamoylphosphate synthetase 2/aspartate transcarba...
ZNF207                0.016   zinc finger protein 207 isoform a 
MLXIPL                0.016   Williams Beuren syndrome chromosome region 14 isofor...
MLXIPL                0.016   Williams Beuren syndrome chromosome region 14 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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