Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239757254
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757254 PREDICTED: hypothetical protein [Homo sapiens]
(247 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757254 PREDICTED: hypothetical protein [Homo sapiens] 523 e-149
gi|38348332 killer cell lectin-like receptor subfamily G, member... 47 2e-05
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [... 43 2e-04
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H... 43 2e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 43 2e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 43 2e-04
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 42 4e-04
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 42 4e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 42 5e-04
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 42 6e-04
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 42 6e-04
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 42 6e-04
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 42 6e-04
gi|153792074 proline rich 12 [Homo sapiens] 40 0.002
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 40 0.002
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 39 0.003
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 39 0.004
gi|18677735 proline-rich coiled-coil 1 [Homo sapiens] 39 0.004
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 39 0.004
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 39 0.004
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 39 0.004
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 39 0.004
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 39 0.005
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 39 0.005
gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo ... 39 0.005
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 39 0.005
gi|56550035 colon carcinoma related protein [Homo sapiens] 39 0.005
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 38 0.007
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 38 0.007
gi|239751592 PREDICTED: hypothetical protein XP_002347924 [Homo ... 37 0.012
>gi|239757254 PREDICTED: hypothetical protein [Homo sapiens]
Length = 247
Score = 523 bits (1348), Expect = e-149
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MPRGSTGAAAGEEAMPMRREVYLEVPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPAN 60
MPRGSTGAAAGEEAMPMRREVYLEVPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPAN
Sbjct: 1 MPRGSTGAAAGEEAMPMRREVYLEVPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPAN 60
Query: 61 SSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSHADD 120
SSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSHADD
Sbjct: 61 SSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSHADD 120
Query: 121 ASQVSPRRVPAVHRLRAPSPHPGVSGLGLHFPQAPGRFSNFDLWFPSQILIVRGWDEGGA 180
ASQVSPRRVPAVHRLRAPSPHPGVSGLGLHFPQAPGRFSNFDLWFPSQILIVRGWDEGGA
Sbjct: 121 ASQVSPRRVPAVHRLRAPSPHPGVSGLGLHFPQAPGRFSNFDLWFPSQILIVRGWDEGGA 180
Query: 181 HGEEAPSSRDADRVCRAVARACVCTCACVFDARTRRRCARRGGCDSCIDPSCSEMAIKKG 240
HGEEAPSSRDADRVCRAVARACVCTCACVFDARTRRRCARRGGCDSCIDPSCSEMAIKKG
Sbjct: 181 HGEEAPSSRDADRVCRAVARACVCTCACVFDARTRRRCARRGGCDSCIDPSCSEMAIKKG 240
Query: 241 RDNRVVE 247
RDNRVVE
Sbjct: 241 RDNRVVE 247
>gi|38348332 killer cell lectin-like receptor subfamily G, member 2
[Homo sapiens]
Length = 409
Score = 47.0 bits (110), Expect = 2e-05
Identities = 55/206 (26%), Positives = 80/206 (38%), Gaps = 41/206 (19%)
Query: 31 SWKVLPGPRSGSCFP--------PSLLW-----------GPDSHFPPAN----------- 60
SW+ PG ++G+ P P+L GP+S PA
Sbjct: 4 SWEAAPGGQAGAELPMEPVGSLVPTLEQPQVPAKVRQPEGPESSPSPAGAVEKAAGAGLE 63
Query: 61 -SSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRP---RDPPASPSVAGRASAHAHS 116
SS + P P SP PP LSL YG PPSP P + P + + A +
Sbjct: 64 PSSKKKPPSPRPGSPRVPP---LSLGYGVCPEPPSPGPALVKLPRNGEAPGAEPAPSAWA 120
Query: 117 HADDASQVSPRRVPAVHRLRAPSPHPGVSGLGLHFPQAPGRFSNFDLWFPSQILIVRGWD 176
+ V + V A PSP P L + P++P + D P+ L++R
Sbjct: 121 PMELQVDVRVKPVGAAGGSSTPSPRPSTRFLKVPVPESPAFSRHAD---PAHQLLLRAPS 177
Query: 177 EGGAHGEEAP-SSRDADRVCRAVARA 201
+GG G +P ++ + C A RA
Sbjct: 178 QGGTWGRRSPLAAARTESGCDAEGRA 203
>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
[Homo sapiens]
Length = 828
Score = 43.1 bits (100), Expect = 2e-04
Identities = 40/127 (31%), Positives = 47/127 (37%), Gaps = 8/127 (6%)
Query: 40 SGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHR-----HPPS 94
S S PP GP S P +SSS P SP + P+G HP S
Sbjct: 51 SDSPAPPGPQAGPPSRPPRYSSSSIPEPFGSRGSPRKAATDGADTPFGRSESAPTLHPYS 110
Query: 95 P-RPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRL--RAPSPHPGVSGLGLHF 151
P P+ P+SP A+ D A+ PR RAPSP PG L
Sbjct: 111 PLSPKGRPSSPRTPLYLQPDAYGSLDRATSPRPRAFDGAGSSLGRAPSPRPGPGPLRQQG 170
Query: 152 PQAPGRF 158
P P F
Sbjct: 171 PPTPFDF 177
Score = 29.6 bits (65), Expect = 2.5
Identities = 34/131 (25%), Positives = 46/131 (35%), Gaps = 6/131 (4%)
Query: 29 RFSWKVLPGPRSGSCFPPSLLW-GPDSHFPPANSSSQVAPLPFLLSPAQP-----PASLL 82
R+S +P P P G D+ F + S+ + P L +P P L
Sbjct: 69 RYSSSSIPEPFGSRGSPRKAATDGADTPFGRSESAPTLHPYSPLSPKGRPSSPRTPLYLQ 128
Query: 83 SLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHP 142
YGS SPRPR + S GRA + Q P + R +P P
Sbjct: 129 PDAYGSLDRATSPRPRAFDGAGSSLGRAPSPRPGPGPLRQQGPPTPFDFLGRAGSPRGSP 188
Query: 143 GVSGLGLHFPQ 153
G FP+
Sbjct: 189 LAEGPQAFFPE 199
>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
sapiens]
Length = 828
Score = 43.1 bits (100), Expect = 2e-04
Identities = 40/127 (31%), Positives = 47/127 (37%), Gaps = 8/127 (6%)
Query: 40 SGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHR-----HPPS 94
S S PP GP S P +SSS P SP + P+G HP S
Sbjct: 51 SDSPAPPGPQAGPPSRPPRYSSSSIPEPFGSRGSPRKAATDGADTPFGRSESAPTLHPYS 110
Query: 95 P-RPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRL--RAPSPHPGVSGLGLHF 151
P P+ P+SP A+ D A+ PR RAPSP PG L
Sbjct: 111 PLSPKGRPSSPRTPLYLQPDAYGSLDRATSPRPRAFDGAGSSLGRAPSPRPGPGPLRQQG 170
Query: 152 PQAPGRF 158
P P F
Sbjct: 171 PPTPFDF 177
Score = 29.6 bits (65), Expect = 2.5
Identities = 34/131 (25%), Positives = 46/131 (35%), Gaps = 6/131 (4%)
Query: 29 RFSWKVLPGPRSGSCFPPSLLW-GPDSHFPPANSSSQVAPLPFLLSPAQP-----PASLL 82
R+S +P P P G D+ F + S+ + P L +P P L
Sbjct: 69 RYSSSSIPEPFGSRGSPRKAATDGADTPFGRSESAPTLHPYSPLSPKGRPSSPRTPLYLQ 128
Query: 83 SLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHP 142
YGS SPRPR + S GRA + Q P + R +P P
Sbjct: 129 PDAYGSLDRATSPRPRAFDGAGSSLGRAPSPRPGPGPLRQQGPPTPFDFLGRAGSPRGSP 188
Query: 143 GVSGLGLHFPQ 153
G FP+
Sbjct: 189 LAEGPQAFFPE 199
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 43.1 bits (100), Expect = 2e-04
Identities = 42/142 (29%), Positives = 58/142 (40%), Gaps = 13/142 (9%)
Query: 16 PMRREVYLEVPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPL--PFLLS 73
P + + +PS S P P++ PP+L P P +S ++PL P +
Sbjct: 372 PTLQATHSFLPSPPLSPLATPPPQA----PPALALPPLQAPPSPPASPPLSPLATPSPQA 427
Query: 74 PAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVH 133
P LL P+ PP P PPASP V+ SA S A + P +VP
Sbjct: 428 PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS--PSATPPSQAPPSLAAPPLQVPP-- 483
Query: 134 RLRAPSPHPGVSGLGLHFPQAP 155
+P P +S PQAP
Sbjct: 484 ---SPPASPPMSPSATPPPQAP 502
Score = 34.3 bits (77), Expect = 0.10
Identities = 47/167 (28%), Positives = 55/167 (32%), Gaps = 26/167 (15%)
Query: 2 PRGSTGAAAGEEAMPMRREVYLEVPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPANS 61
P S A +A P L+VP S P S S PP P A
Sbjct: 458 PPVSPSATPPSQAPPSLAAPPLQVPPS----PPASPPMSPSATPP----------PQAPP 503
Query: 62 SSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSH---- 117
PL P Q P +L + P + PP+ P P SPS + S A
Sbjct: 504 PLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP 563
Query: 118 ---ADDASQVSPR-----RVPAVHRLRAPSPHPGVSGLGLHFPQAPG 156
A QV P + A R P P VSG L APG
Sbjct: 564 PVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPG 610
Score = 30.8 bits (68), Expect = 1.1
Identities = 28/103 (27%), Positives = 39/103 (37%), Gaps = 8/103 (7%)
Query: 58 PANSSSQVAPLPFLLSPAQPPASLLSLPYGSH-----RHPPSPRPRDPPASPSVAGRASA 112
P +SS P P +Q P +L + P+ S P P P A PS+ S
Sbjct: 298 PLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSP 357
Query: 113 HAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGLGLHFPQAP 155
A + + + + A H P P +S L PQAP
Sbjct: 358 PATPPSQATTSLGSPTLQATHSF---LPSPPLSPLATPPPQAP 397
Score = 28.9 bits (63), Expect = 4.3
Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 10/98 (10%)
Query: 36 PGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSL-----PYGSHR 90
P +C P + GP P A + APLP+ PA P S L G
Sbjct: 659 PDAELAACHPAAWSRGPAP--PLAFRGAPGAPLPW--PPATGPGSADGLCTIYETEGPES 714
Query: 91 HPPSPRPRDPPASPSVA-GRASAHAHSHADDASQVSPR 127
P+P DP SP + G+A+A A + A S R
Sbjct: 715 ATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQAR 752
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 43.1 bits (100), Expect = 2e-04
Identities = 42/142 (29%), Positives = 58/142 (40%), Gaps = 13/142 (9%)
Query: 16 PMRREVYLEVPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPL--PFLLS 73
P + + +PS S P P++ PP+L P P +S ++PL P +
Sbjct: 333 PTLQATHSFLPSPPLSPLATPPPQA----PPALALPPLQAPPSPPASPPLSPLATPSPQA 388
Query: 74 PAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVH 133
P LL P+ PP P PPASP V+ SA S A + P +VP
Sbjct: 389 PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS--PSATPPSQAPPSLAAPPLQVPP-- 444
Query: 134 RLRAPSPHPGVSGLGLHFPQAP 155
+P P +S PQAP
Sbjct: 445 ---SPPASPPMSPSATPPPQAP 463
Score = 34.3 bits (77), Expect = 0.10
Identities = 47/167 (28%), Positives = 55/167 (32%), Gaps = 26/167 (15%)
Query: 2 PRGSTGAAAGEEAMPMRREVYLEVPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPANS 61
P S A +A P L+VP S P S S PP P A
Sbjct: 419 PPVSPSATPPSQAPPSLAAPPLQVPPS----PPASPPMSPSATPP----------PQAPP 464
Query: 62 SSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSH---- 117
PL P Q P +L + P + PP+ P P SPS + S A
Sbjct: 465 PLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP 524
Query: 118 ---ADDASQVSPR-----RVPAVHRLRAPSPHPGVSGLGLHFPQAPG 156
A QV P + A R P P VSG L APG
Sbjct: 525 PVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPG 571
Score = 28.9 bits (63), Expect = 4.3
Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 10/98 (10%)
Query: 36 PGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSL-----PYGSHR 90
P +C P + GP P A + APLP+ PA P S L G
Sbjct: 620 PDAELAACHPAAWSRGPAP--PLAFRGAPGAPLPW--PPATGPGSADGLCTIYETEGPES 675
Query: 91 HPPSPRPRDPPASPSVA-GRASAHAHSHADDASQVSPR 127
P+P DP SP + G+A+A A + A S R
Sbjct: 676 ATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQAR 713
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 42.4 bits (98), Expect = 4e-04
Identities = 34/96 (35%), Positives = 41/96 (42%), Gaps = 15/96 (15%)
Query: 42 SCFPPSL--------LWGPDSHFPPANS----SSQVAPLPFLLSPAQPPASLLSLPYGSH 89
SCF P+ +W P S PA S S PLP S ++ P+S L LP
Sbjct: 3 SCFAPAKFLKRHSKEVWKPSSLIHPARSNQPPSRTCPPLPGPPSRSRSPSSRLKLPADPP 62
Query: 90 RH---PPSPRPRDPPASPSVAGRASAHAHSHADDAS 122
R P P P PPA+P V G A +H AS
Sbjct: 63 RALPGSPEPPPPPPPAAPHVLGARVAAGPTHRLSAS 98
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 42.4 bits (98), Expect = 4e-04
Identities = 34/96 (35%), Positives = 41/96 (42%), Gaps = 15/96 (15%)
Query: 42 SCFPPSL--------LWGPDSHFPPANS----SSQVAPLPFLLSPAQPPASLLSLPYGSH 89
SCF P+ +W P S PA S S PLP S ++ P+S L LP
Sbjct: 3 SCFAPAKFLKRHSKEVWKPSSLIHPARSNQPPSRTCPPLPGPPSRSRSPSSRLKLPADPP 62
Query: 90 RH---PPSPRPRDPPASPSVAGRASAHAHSHADDAS 122
R P P P PPA+P V G A +H AS
Sbjct: 63 RALPGSPEPPPPPPPAAPHVLGARVAAGPTHRLSAS 98
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 42.0 bits (97), Expect = 5e-04
Identities = 41/133 (30%), Positives = 54/133 (40%), Gaps = 13/133 (9%)
Query: 25 VPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPL--PFLLSPAQPPASLL 82
+PS S P P++ PP L P P +S ++PL P +P LL
Sbjct: 606 LPSPPLSPLATPPPQA----PPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLL 661
Query: 83 SLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHP 142
P+ PP P PPASP V+ SA S A + P +VP +P P
Sbjct: 662 QAPFSPPPSPPVQAPFSPPASPPVS--PSATPPSQAPPSLAAPPLQVPP-----SPPASP 714
Query: 143 GVSGLGLHFPQAP 155
+S PQAP
Sbjct: 715 PMSPSATPPPQAP 727
Score = 37.0 bits (84), Expect = 0.016
Identities = 50/172 (29%), Positives = 61/172 (35%), Gaps = 23/172 (13%)
Query: 2 PRGSTGAAAGEEAMPMRREVYLEVPSSR-----FSWKVLPGPRSGSCFPPSLLWGPDSHF 56
P S A +A P L+VP S S P PR P LL P
Sbjct: 714 PPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRV-----PPLLAAPPLQV 768
Query: 57 PPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHS 116
PP+ +S + P P Q P +L + P + PP+ P P SPS + S A
Sbjct: 769 PPSPPAS-LPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATP 827
Query: 117 H-------ADDASQVSPR-----RVPAVHRLRAPSPHPGVSGLGLHFPQAPG 156
A QV P + A R P P VSG L APG
Sbjct: 828 PPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPG 879
Score = 35.4 bits (80), Expect = 0.046
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 57 PPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPR--PRDPPASPSVAGRASAHA 114
PP N+++ PLP L P+ P A+ L L S PPS + P P PS A +
Sbjct: 319 PPDNAAT---PLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTP 375
Query: 115 HSHADDASQ-VSPRRVPAVHRLRAPSPHPGVSGLGLHFPQA 154
A + Q + P +VP H L +PS S L L QA
Sbjct: 376 PMQAPPSLQTIPPIQVP--HSLTSPSLQAPPSPLALSSLQA 414
Score = 35.0 bits (79), Expect = 0.060
Identities = 32/110 (29%), Positives = 42/110 (38%), Gaps = 11/110 (10%)
Query: 57 PPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPP--------SPRPRDPP--ASPSV 106
PP ++S P L +P P L P PP +P P+ PP ASP +
Sbjct: 544 PPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPL 603
Query: 107 AGRASAHAHSHADDASQVSPR-RVPAVHRLRAPSPHPGVSGLGLHFPQAP 155
G S A Q P +P + +P P +S L PQAP
Sbjct: 604 QGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAP 653
Score = 33.1 bits (74), Expect = 0.23
Identities = 33/116 (28%), Positives = 42/116 (36%), Gaps = 9/116 (7%)
Query: 46 PSLLWGPDSHFPPANSSSQVAPLP------FLLSPAQPPASLLSLPYGSHRHPPSPRPRD 99
PS + P PPA +S + LP P Q P L P + PP+ P
Sbjct: 584 PSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLS 643
Query: 100 PPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGLGLHFPQAP 155
P A+PS + H + SP P V +P P VS QAP
Sbjct: 644 PLATPSPQAPNALAVHLL---QAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAP 696
Score = 29.6 bits (65), Expect = 2.5
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 72 LSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVP- 130
+SP Q ASL S P S P PP ++ AS + A VSP P
Sbjct: 432 MSPRQTQASLT-----SPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPA--VSPLSSPL 484
Query: 131 AVHRLRAPSPHPGVSGLGLHFPQAP 155
+H L+A +S L H PQAP
Sbjct: 485 TIHPLQA------LSSLASHSPQAP 503
Score = 29.3 bits (64), Expect = 3.3
Identities = 44/158 (27%), Positives = 56/158 (35%), Gaps = 28/158 (17%)
Query: 2 PRGSTGAAAGEEAMPMRREVYLEVPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPANS 61
P S A +A P L+VP P P + PS P + P A
Sbjct: 683 PPVSPSATPPSQAPPSLAAPPLQVP---------PSPPASPPMSPSATPPPQAPPPLAAP 733
Query: 62 SSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPP--ASPSVAGRASAHAHSHAD 119
QV P P PA PP S +P PR PP A+P + S A
Sbjct: 734 PLQVPPSP----PASPPMS----------PSATPPPRVPPLLAAPPLQVPPSPPASLPMS 779
Query: 120 DASQVSPRRVPAVHR--LRA-PSPHPGVSGLGLHFPQA 154
++ P+ PA+ L+A PSP G P A
Sbjct: 780 PLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSA 817
Score = 29.3 bits (64), Expect = 3.3
Identities = 37/108 (34%), Positives = 42/108 (38%), Gaps = 14/108 (12%)
Query: 57 PPANSSSQVAP---LPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAH 113
P A SQ P P L P PPAS P S P P+ P A+P + S
Sbjct: 687 PSATPPSQAPPSLAAPPLQVPPSPPAS----PPMSPSATPPPQAPPPLAAPPLQVPPSPP 742
Query: 114 AHSHADDASQVSPRRVP---AVHRLRAPSPHPG---VSGLGLHFPQAP 155
A S S P RVP A L+ P P +S L PQAP
Sbjct: 743 A-SPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAP 789
Score = 28.9 bits (63), Expect = 4.3
Identities = 30/98 (30%), Positives = 39/98 (39%), Gaps = 10/98 (10%)
Query: 36 PGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSL-----PYGSHR 90
P +C P + GP P A + APLP+ PA P S L G
Sbjct: 928 PDAELAACHPAAWSRGPAP--PLAFRGAPGAPLPW--PPATGPGSADGLCTIYETEGPES 983
Query: 91 HPPSPRPRDPPASPSVA-GRASAHAHSHADDASQVSPR 127
P+P DP SP + G+A+A A + A S R
Sbjct: 984 ATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQAR 1021
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 41.6 bits (96), Expect = 6e-04
Identities = 39/135 (28%), Positives = 52/135 (38%), Gaps = 32/135 (23%)
Query: 35 LPGPRSGSCFPPSLLWGP--------------DSHFPPANSSSQVAPLPFLLSPAQPPAS 80
LP P S + PP LL P ++ PP SS P P P PP +
Sbjct: 163 LPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLA 222
Query: 81 LLSLPYGSHRHPPSPRPRDP-PASPSVAG------------RASAHAHSHADDASQVSPR 127
L+ P PP P P P PASP G ++ + +A++ SP
Sbjct: 223 FLAPP-----PPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPP 277
Query: 128 RVPAVHRLRAPSPHP 142
R PA + A P+P
Sbjct: 278 RSPAEPKGSALGPNP 292
Score = 30.4 bits (67), Expect = 1.5
Identities = 34/109 (31%), Positives = 40/109 (36%), Gaps = 24/109 (22%)
Query: 36 PGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSP 95
PGP G PP D PP S PLP S A PP LL PP P
Sbjct: 144 PGPAPG---PPQ-----DISEPPGGS-----PLPSPPSTAPPPPPLLL-------EPPPP 183
Query: 96 RPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLR--APSPHP 142
PP P + A + H+ + + P +P L AP P P
Sbjct: 184 PSMAPPPPPVL--EALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPP 230
Score = 27.7 bits (60), Expect = 9.6
Identities = 22/69 (31%), Positives = 25/69 (36%), Gaps = 13/69 (18%)
Query: 36 PGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSP 95
P P PP P PPA PLP A PPA P S P+
Sbjct: 395 PLPPPAPPLPP-----PAPPLPPA-----APPLPCAQKAAHPPAGFTKTPKSS---SPAL 441
Query: 96 RPRDPPASP 104
+P+ P SP
Sbjct: 442 KPKPNPPSP 450
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 41.6 bits (96), Expect = 6e-04
Identities = 39/135 (28%), Positives = 52/135 (38%), Gaps = 32/135 (23%)
Query: 35 LPGPRSGSCFPPSLLWGP--------------DSHFPPANSSSQVAPLPFLLSPAQPPAS 80
LP P S + PP LL P ++ PP SS P P P PP +
Sbjct: 163 LPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLA 222
Query: 81 LLSLPYGSHRHPPSPRPRDP-PASPSVAG------------RASAHAHSHADDASQVSPR 127
L+ P PP P P P PASP G ++ + +A++ SP
Sbjct: 223 FLAPP-----PPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPP 277
Query: 128 RVPAVHRLRAPSPHP 142
R PA + A P+P
Sbjct: 278 RSPAEPKGSALGPNP 292
Score = 30.4 bits (67), Expect = 1.5
Identities = 34/109 (31%), Positives = 40/109 (36%), Gaps = 24/109 (22%)
Query: 36 PGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSP 95
PGP G PP D PP S PLP S A PP LL PP P
Sbjct: 144 PGPAPG---PPQ-----DISEPPGGS-----PLPSPPSTAPPPPPLLL-------EPPPP 183
Query: 96 RPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLR--APSPHP 142
PP P + A + H+ + + P +P L AP P P
Sbjct: 184 PSMAPPPPPVL--EALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPP 230
Score = 27.7 bits (60), Expect = 9.6
Identities = 22/69 (31%), Positives = 25/69 (36%), Gaps = 13/69 (18%)
Query: 36 PGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSP 95
P P PP P PPA PLP A PPA P S P+
Sbjct: 395 PLPPPAPPLPP-----PAPPLPPA-----APPLPCAQKAAHPPAGFTKTPKSS---SPAL 441
Query: 96 RPRDPPASP 104
+P+ P SP
Sbjct: 442 KPKPNPPSP 450
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 41.6 bits (96), Expect = 6e-04
Identities = 39/135 (28%), Positives = 52/135 (38%), Gaps = 32/135 (23%)
Query: 35 LPGPRSGSCFPPSLLWGP--------------DSHFPPANSSSQVAPLPFLLSPAQPPAS 80
LP P S + PP LL P ++ PP SS P P P PP +
Sbjct: 163 LPSPPSTAPPPPPLLLEPPPPPSMAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAPPLA 222
Query: 81 LLSLPYGSHRHPPSPRPRDP-PASPSVAG------------RASAHAHSHADDASQVSPR 127
L+ P PP P P P PASP G ++ + +A++ SP
Sbjct: 223 FLAPP-----PPPVPAPAPPAPASPHTVGTRLFPPGGVTKWKSDVALNGRQAEATRASPP 277
Query: 128 RVPAVHRLRAPSPHP 142
R PA + A P+P
Sbjct: 278 RSPAEPKGSALGPNP 292
Score = 30.4 bits (67), Expect = 1.5
Identities = 34/109 (31%), Positives = 40/109 (36%), Gaps = 24/109 (22%)
Query: 36 PGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSP 95
PGP G PP D PP S PLP S A PP LL PP P
Sbjct: 144 PGPAPG---PPQ-----DISEPPGGS-----PLPSPPSTAPPPPPLLL-------EPPPP 183
Query: 96 RPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLR--APSPHP 142
PP P + A + H+ + + P +P L AP P P
Sbjct: 184 PSMAPPPPPVL--EALSPPHTLSSPSIPTPPDFIPPAPPLAFLAPPPPP 230
Score = 27.7 bits (60), Expect = 9.6
Identities = 22/69 (31%), Positives = 25/69 (36%), Gaps = 13/69 (18%)
Query: 36 PGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSP 95
P P PP P PPA PLP A PPA P S P+
Sbjct: 395 PLPPPAPPLPP-----PAPPLPPA-----APPLPCAQKAAHPPAGFTKTPKSS---SPAL 441
Query: 96 RPRDPPASP 104
+P+ P SP
Sbjct: 442 KPKPNPPSP 450
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 41.6 bits (96), Expect = 6e-04
Identities = 60/198 (30%), Positives = 69/198 (34%), Gaps = 39/198 (19%)
Query: 23 LEVPSSRFSWKVLPGPRSGSCFPPS-------LLWGPDSHFPPANSSSQVAPLPFLLSPA 75
L PS +S + PG +SG F PS LL DS P N S LP PA
Sbjct: 1950 LPSPSDFYSTPLQPGGQSG--FLPSGAPAQQMLLPMVDSQLPVVNFGS----LPPAPPPA 2003
Query: 76 QPPASLLSLPYGSHRHPPSPRPRDPPAS------------PSVAGRASAH-AHSHADDAS 122
PP SLL P G PPS R PPA P+ GRA H
Sbjct: 2004 PPPLSLL--PVGPALQPPSLAVRPPPAPATRVLPSPARPFPASLGRAELHPVELKPFQDY 2061
Query: 123 QVSPRRVPAVHRLRAPSPHPGVSGLGLHFPQAPGRFS------NFDLW---FPSQIL--I 171
Q + R P SGL P +S DL+ P L I
Sbjct: 2062 QKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLYQQASPPDALRWI 2121
Query: 172 VRGWDEGGAHGEEAPSSR 189
+ W+ G E PS R
Sbjct: 2122 PKPWERTGPPPREGPSRR 2139
Score = 28.1 bits (61), Expect = 7.4
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 59 ANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASP 104
A+ Q P S AQPP S P + + P S +P+ PPA+P
Sbjct: 87 ASKQEQSDPKSSDASTAQPPESQ---PLPASQTPASNQPKRPPAAP 129
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 40.0 bits (92), Expect = 0.002
Identities = 48/161 (29%), Positives = 62/161 (38%), Gaps = 29/161 (18%)
Query: 34 VLPGPRSGSCFPPSLLWGPDSHFP-PANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHP 92
VLP P PP LL SH P P+ S+S+V LL PA +
Sbjct: 793 VLPPP------PPQLLPSVLSHAPSPSPSASKVGV--HLLEPATRDGA------------ 832
Query: 93 PSPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGLGLHFP 152
P P P PP P + + AH SH + + SPR P L P + G P
Sbjct: 833 PQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPE-ESLDPPGAMQELLGALEPLP 891
Query: 153 QAPGRFSNFDLWFPSQILIVRGWDEGGAHGEEAPSSRDADR 193
APG + + P+ G D GA+ +P A R
Sbjct: 892 PAPG---DTGVGPPNS----EGKDPAGAYRSPSPQGTKAPR 925
Score = 31.6 bits (70), Expect = 0.67
Identities = 33/107 (30%), Positives = 38/107 (35%), Gaps = 19/107 (17%)
Query: 36 PGPRSGSCFPP--SLLWGPDSHFPP--------ANSSSQVAPLPFLLSPAQPPASLLSLP 85
PGP + S S W H P A S P LS Q PAS S P
Sbjct: 102 PGPSASSLLSQFRSPSWQTAMHTPGPTELFISGALPGSSTFPSSSALSAYQHPASFGSRP 161
Query: 86 YGSHRHPPSPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAV 132
+ P S +DPP SP G S H D + P + P V
Sbjct: 162 FPV---PSSLSLQDPPFSPPANGLLSPH------DVLHLKPSQAPTV 199
Score = 31.6 bits (70), Expect = 0.67
Identities = 28/73 (38%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 35 LPGPRS-GSCFPPSLLWGPDSHFPPANSSS-QVAPLPFLLSPAQPPASLLSLPYGSHRHP 92
LP S G+ PP L P PPA + Q P P PA P L P S P
Sbjct: 1439 LPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPP 1498
Query: 93 PSPRPRDPPASPS 105
P P PPA PS
Sbjct: 1499 PPLPPPPPPAMPS 1511
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 39.7 bits (91), Expect = 0.002
Identities = 42/157 (26%), Positives = 60/157 (38%), Gaps = 17/157 (10%)
Query: 2 PRGSTGAAAGEEAMPMRREV-YLEVPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPAN 60
PRG+ G A+ R V Y+ P+ R K PGPR+ P PP
Sbjct: 1774 PRGTQKTTPGVPAVLRGRTVIYVPSPAPRAQPKGTPGPRAT----------PRKVAPPC- 1822
Query: 61 SSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSHADD 120
+Q A + SP Q + L P + +P P+ + + + S
Sbjct: 1823 -LAQPAAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPRSATPPARLAKTPSSSSSQTSP 1881
Query: 121 ASQVSPRRVPAVHRLRAPSPHPGVSGLGLHFPQAPGR 157
ASQ PR+ P V + P PG S + P+ P R
Sbjct: 1882 ASQPLPRKRPPVTQAAGALPGPGASPV----PKTPAR 1914
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 39.3 bits (90), Expect = 0.003
Identities = 42/149 (28%), Positives = 58/149 (38%), Gaps = 16/149 (10%)
Query: 13 EAMPMRR-----EVYLEVPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPANSSSQVAP 67
EA P+ + E LE P + +LP P PP +S P +S+++P
Sbjct: 415 EAKPLGKAGVQLEPQLEAPLNE-EMPLLPPPEESPLSPPP----EESPTSPPPEASRLSP 469
Query: 68 LPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSHADDASQVSPR 127
P L PA P L L P SP P + P SP + S +++ P
Sbjct: 470 PPEEL-PASPLPEALHLSRPLEESPLSPPPEESPLSPP----PESSPFSPLEESPLSPPE 524
Query: 128 RVPAVHRLRAP-SPHPGVSGLGLHFPQAP 155
P L P SP P S L F ++P
Sbjct: 525 ESPPSPALETPLSPPPEASPLSPPFEESP 553
Score = 34.7 bits (78), Expect = 0.079
Identities = 34/123 (27%), Positives = 48/123 (39%), Gaps = 17/123 (13%)
Query: 45 PPSLLWGPDS------HFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPR 98
P + GPDS PP + + PF L+PA P P +PP P P
Sbjct: 2146 PAGSVPGPDSPGELFLKLPPQVPAQVPSQDPFGLAPAYPLEP--RFPTAPPTYPPYPSPT 2203
Query: 99 DPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPH-----PGVSGLGLHFPQ 153
PA P + G AS+ + +P P H+ P P P + L + P+
Sbjct: 2204 GAPAQPPMLG-ASSRPGAGQPGEFHTTPPGTPR-HQPSTPDPFLKPRCPSLDNLAV--PE 2259
Query: 154 APG 156
+PG
Sbjct: 2260 SPG 2262
Score = 32.3 bits (72), Expect = 0.39
Identities = 36/132 (27%), Positives = 50/132 (37%), Gaps = 29/132 (21%)
Query: 33 KVLPGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPP---ASLLSLPYGSH 89
++ P P PP +S P +S++ P PF SP PP + L P S
Sbjct: 571 RLSPPPEESPMSPPP----EESPMSPPPEASRLFP-PFEESPLSPPPEESPLSPPPEASR 625
Query: 90 RHPP------SPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPG 143
PP SP P + P SP + S++SP +P V RL P
Sbjct: 626 LSPPPEDSPMSPPPEESPMSP-------------PPEVSRLSP--LPVVSRLSPPPEESP 670
Query: 144 VSGLGLHFPQAP 155
+S P +P
Sbjct: 671 LSPPPEESPTSP 682
Score = 31.2 bits (69), Expect = 0.87
Identities = 24/89 (26%), Positives = 31/89 (34%), Gaps = 21/89 (23%)
Query: 33 KVLPGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLL-----------------SPA 75
++ P P PP +S P S+++PLP + SP
Sbjct: 625 RLSPPPEDSPMSPPP----EESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPT 680
Query: 76 QPPASLLSLPYGSHRHPPSPRPRDPPASP 104
PP L P SP P D PASP
Sbjct: 681 SPPPEASRLSPPPEDSPTSPPPEDSPASP 709
Score = 30.8 bits (68), Expect = 1.1
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 15/98 (15%)
Query: 14 AMPMRREVYLEVPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPANSS-----SQVAPL 68
A P+ ++L P + P P PP S F P S + P
Sbjct: 476 ASPLPEALHLSRPLEESP--LSPPPEESPLSPPP----ESSPFSPLEESPLSPPEESPPS 529
Query: 69 PFLLSPAQPP--ASLLSLPYGSHRHPPSPRPRDPPASP 104
P L +P PP AS LS P+ P SP P + P SP
Sbjct: 530 PALETPLSPPPEASPLSPPF--EESPLSPPPEELPTSP 565
Score = 30.0 bits (66), Expect = 1.9
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 57 PPANSSSQVAPLPFLLSPAQPPAS-LLSLPYGSHRHPPSPRPRDPPASPSVA 107
PP S P P SPA PP L+ LP PP P P +SP A
Sbjct: 4909 PPPEEPSP-PPSPLAPSPASPPTEPLVELPTEPLAEPPVPSPLPLASSPESA 4959
Score = 29.6 bits (65), Expect = 2.5
Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
Query: 35 LPGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPS 94
LP P P L GP PP +S + L SP+ + LP HP +
Sbjct: 4289 LPAPPGALSTGPVL--GPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLP---PTHPGT 4343
Query: 95 PRPRDPPASPSVAGRASAHAHSHAD 119
P+P+ P P GR S A AD
Sbjct: 4344 PKPQGPTLEPP-PGRVSPAAAQLAD 4367
Score = 28.5 bits (62), Expect = 5.6
Identities = 32/108 (29%), Positives = 39/108 (36%), Gaps = 13/108 (12%)
Query: 36 PGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPA--SLLSLPYGSHRHPP 93
P P PP S P S +P P SPA PP SL+SLP P
Sbjct: 673 PPPEESPTSPPP----EASRLSPPPEDSPTSPPPED-SPASPPPEDSLMSLPL--EESPL 725
Query: 94 SPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPH 141
P P +P P R+ S + +SPR +A PH
Sbjct: 726 LPLPEEPQLCP----RSEGPHLSPRPEEPHLSPRPEEPHLSPQAEEPH 769
Score = 27.7 bits (60), Expect = 9.6
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 54 SHFPPANSSSQVAPLPFLLSPAQPP-ASLLSLPYGSHRHPPSPRPRDPPASP 104
S P S ++P P L + PP AS LS P P SP P + P SP
Sbjct: 543 SPLSPPFEESPLSPPPEELPTSPPPEASRLSPP--PEESPMSPPPEESPMSP 592
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 38.9 bits (89), Expect = 0.004
Identities = 43/163 (26%), Positives = 59/163 (36%), Gaps = 32/163 (19%)
Query: 8 AAAGEEAMPMRREVYLEVPSSRFSWKVLPG--PRSGSCFPPSLLWGPDSHFP-------- 57
+A EE +P + PSS P PR+ C P++ GP P
Sbjct: 1019 SAEVEELLPQHLQ-----PSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPS 1073
Query: 58 -----PANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGR--A 110
P+ SS + P P + PA L + PP PRP PP P+ R
Sbjct: 1074 RTPGPPSAQSSPIDAQPATPLPQKDPAQPLE-----PKRPPPPRPVAPPTRPAPPQRPPP 1128
Query: 111 SAHAHSHADDASQVSPRRVPAVHR-----LRAPSPHPGVSGLG 148
+ A S A + + P R PSP G++G G
Sbjct: 1129 PSGARSPAPTRKEFGAPKSPGTTRKDNIGRSQPSPQAGLAGPG 1171
>gi|18677735 proline-rich coiled-coil 1 [Homo sapiens]
Length = 445
Score = 38.9 bits (89), Expect = 0.004
Identities = 36/125 (28%), Positives = 43/125 (34%), Gaps = 21/125 (16%)
Query: 25 VPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSL 84
VP + S P S FPP P PP S APLPF+ PA P
Sbjct: 32 VPLAATSSFSSPNVSSMESFPPLAYSTPQPPLPPVRPS---APLPFVPPPAVPSV----- 83
Query: 85 PYGSHRHPPSPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGV 144
PP PP SPS A SH ++ +P AP P +
Sbjct: 84 -------PPLVTSMPPPVSPSTAAAFGNPPVSHFPPSTSAPNTLLP------APPSGPPI 130
Query: 145 SGLGL 149
SG +
Sbjct: 131 SGFSV 135
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 38.9 bits (89), Expect = 0.004
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Query: 58 PANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSH 117
PA SS+ P L +P P++ P GS +P P +P H+H
Sbjct: 195 PAPSSAPPGT-PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPV--------PHTH 245
Query: 118 ADDASQVSPRRVPAVHRLRAPSPHPGVSGL 147
A + P+R P+ H PSPHP + L
Sbjct: 246 IQQAPALHPQRPPSPHPPPHPSPHPPLQPL 275
Score = 36.2 bits (82), Expect = 0.027
Identities = 35/131 (26%), Positives = 43/131 (32%), Gaps = 30/131 (22%)
Query: 36 PGPR-SGSCFPPSLLWGPDSHFPPANSSSQVAPLPFL-------LSPAQPPASLLSLPYG 87
PGP S + PP P + P + AP+P L P +PP+
Sbjct: 210 PGPTPSATAVPPQ--GSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSP------- 260
Query: 88 SHRHPPSPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGL 147
HPP PP P A SHA P +H P PH +G
Sbjct: 261 ---HPPPHPSPHPPLQPLTGSAGQPSAPSHAQ----------PPLHGQGPPGPHSLQAGP 307
Query: 148 GLHFPQAPGRF 158
L P P F
Sbjct: 308 LLQHPGPPQPF 318
Score = 32.0 bits (71), Expect = 0.51
Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 11/99 (11%)
Query: 52 PDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPS--------PRPRDPPAS 103
P P N S + + AQPPA L P G P S P P P++
Sbjct: 159 PSIPSPQDNESDSDSSAQQQMLQAQPPA--LQAPTGVTPAPSSAPPGTPQLPTPGPTPSA 216
Query: 104 PSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHP 142
+V + S A S A + Q VP H +AP+ HP
Sbjct: 217 TAVPPQGSPTA-SQAPNQPQAPTAPVPHTHIQQAPALHP 254
Score = 29.6 bits (65), Expect = 2.5
Identities = 44/169 (26%), Positives = 59/169 (34%), Gaps = 26/169 (15%)
Query: 2 PRGSTGAAA-GEEAMPMRREVYLEVPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPAN 60
P+ S G A G L++P+S+ + + PR PP+ L P PP
Sbjct: 322 PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQP-LPPAPLAMPHIKPPPTT 380
Query: 61 SSSQV-------------APLPFLLSP-AQPPASLLSLPYGSHRHPPSPRPRDPPASPSV 106
Q+ P PF ++ PP +L L S HPPS P P
Sbjct: 381 PIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQS 440
Query: 107 AGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGLGLHFPQAP 155
S+ A SQ P P+ HP +GL PQ P
Sbjct: 441 QPLPSSPAQPPGLTQSQNLP---------PPPASHP-PTGLHQVAPQPP 479
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 38.9 bits (89), Expect = 0.004
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Query: 58 PANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSH 117
PA SS+ P L +P P++ P GS +P P +P H+H
Sbjct: 749 PAPSSAPPGT-PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPV--------PHTH 799
Query: 118 ADDASQVSPRRVPAVHRLRAPSPHPGVSGL 147
A + P+R P+ H PSPHP + L
Sbjct: 800 IQQAPALHPQRPPSPHPPPHPSPHPPLQPL 829
Score = 36.2 bits (82), Expect = 0.027
Identities = 35/131 (26%), Positives = 43/131 (32%), Gaps = 30/131 (22%)
Query: 36 PGPR-SGSCFPPSLLWGPDSHFPPANSSSQVAPLPFL-------LSPAQPPASLLSLPYG 87
PGP S + PP P + P + AP+P L P +PP+
Sbjct: 764 PGPTPSATAVPPQ--GSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSP------- 814
Query: 88 SHRHPPSPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGL 147
HPP PP P A SHA P +H P PH +G
Sbjct: 815 ---HPPPHPSPHPPLQPLTGSAGQPSAPSHAQ----------PPLHGQGPPGPHSLQAGP 861
Query: 148 GLHFPQAPGRF 158
L P P F
Sbjct: 862 LLQHPGPPQPF 872
Score = 32.0 bits (71), Expect = 0.51
Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 11/99 (11%)
Query: 52 PDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPS--------PRPRDPPAS 103
P P N S + + AQPPA L P G P S P P P++
Sbjct: 713 PSIPSPQDNESDSDSSAQQQMLQAQPPA--LQAPTGVTPAPSSAPPGTPQLPTPGPTPSA 770
Query: 104 PSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHP 142
+V + S A S A + Q VP H +AP+ HP
Sbjct: 771 TAVPPQGSPTA-SQAPNQPQAPTAPVPHTHIQQAPALHP 808
Score = 29.6 bits (65), Expect = 2.5
Identities = 44/169 (26%), Positives = 59/169 (34%), Gaps = 26/169 (15%)
Query: 2 PRGSTGAAA-GEEAMPMRREVYLEVPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPAN 60
P+ S G A G L++P+S+ + + PR PP+ L P PP
Sbjct: 876 PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQP-LPPAPLAMPHIKPPPTT 934
Query: 61 SSSQV-------------APLPFLLSP-AQPPASLLSLPYGSHRHPPSPRPRDPPASPSV 106
Q+ P PF ++ PP +L L S HPPS P P
Sbjct: 935 PIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQS 994
Query: 107 AGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGLGLHFPQAP 155
S+ A SQ P P+ HP +GL PQ P
Sbjct: 995 QPLPSSPAQPPGLTQSQNLP---------PPPASHP-PTGLHQVAPQPP 1033
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 38.9 bits (89), Expect = 0.004
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Query: 58 PANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSH 117
PA SS+ P L +P P++ P GS +P P +P H+H
Sbjct: 749 PAPSSAPPGT-PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPV--------PHTH 799
Query: 118 ADDASQVSPRRVPAVHRLRAPSPHPGVSGL 147
A + P+R P+ H PSPHP + L
Sbjct: 800 IQQAPALHPQRPPSPHPPPHPSPHPPLQPL 829
Score = 36.2 bits (82), Expect = 0.027
Identities = 35/131 (26%), Positives = 43/131 (32%), Gaps = 30/131 (22%)
Query: 36 PGPR-SGSCFPPSLLWGPDSHFPPANSSSQVAPLPFL-------LSPAQPPASLLSLPYG 87
PGP S + PP P + P + AP+P L P +PP+
Sbjct: 764 PGPTPSATAVPPQ--GSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSP------- 814
Query: 88 SHRHPPSPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGL 147
HPP PP P A SHA P +H P PH +G
Sbjct: 815 ---HPPPHPSPHPPLQPLTGSAGQPSAPSHAQ----------PPLHGQGPPGPHSLQAGP 861
Query: 148 GLHFPQAPGRF 158
L P P F
Sbjct: 862 LLQHPGPPQPF 872
Score = 32.0 bits (71), Expect = 0.51
Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 11/99 (11%)
Query: 52 PDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPS--------PRPRDPPAS 103
P P N S + + AQPPA L P G P S P P P++
Sbjct: 713 PSIPSPQDNESDSDSSAQQQMLQAQPPA--LQAPTGVTPAPSSAPPGTPQLPTPGPTPSA 770
Query: 104 PSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHP 142
+V + S A S A + Q VP H +AP+ HP
Sbjct: 771 TAVPPQGSPTA-SQAPNQPQAPTAPVPHTHIQQAPALHP 808
Score = 29.6 bits (65), Expect = 2.5
Identities = 44/169 (26%), Positives = 59/169 (34%), Gaps = 26/169 (15%)
Query: 2 PRGSTGAAA-GEEAMPMRREVYLEVPSSRFSWKVLPGPRSGSCFPPSLLWGPDSHFPPAN 60
P+ S G A G L++P+S+ + + PR PP+ L P PP
Sbjct: 876 PQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQP-LPPAPLAMPHIKPPPTT 934
Query: 61 SSSQV-------------APLPFLLSP-AQPPASLLSLPYGSHRHPPSPRPRDPPASPSV 106
Q+ P PF ++ PP +L L S HPPS P P
Sbjct: 935 PIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQS 994
Query: 107 AGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGLGLHFPQAP 155
S+ A SQ P P+ HP +GL PQ P
Sbjct: 995 QPLPSSPAQPPGLTQSQNLP---------PPPASHP-PTGLHQVAPQPP 1033
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 38.9 bits (89), Expect = 0.004
Identities = 45/135 (33%), Positives = 54/135 (40%), Gaps = 21/135 (15%)
Query: 35 LPGPRSGSCFPPSLLWGPDSHF-PPANSSSQVAPLPFLLSPA-QPPASLLSLPY-GSHR- 90
LP P G P ++ P S PPA AP +P PP S + P G H
Sbjct: 280 LPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPP 339
Query: 91 ----HPPSPRPRDP-----PASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPH 141
HPP+P P P +P V SA H A + PAVH +AP H
Sbjct: 340 APGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHPQAPGVHPAA----PAVHP-QAPGVH 394
Query: 142 PGVSGLGLHFPQAPG 156
P G+ PQAPG
Sbjct: 395 PPAPGM---HPQAPG 406
Score = 31.6 bits (70), Expect = 0.67
Identities = 40/125 (32%), Positives = 45/125 (36%), Gaps = 13/125 (10%)
Query: 37 GPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPR 96
GP PP L+ G P S P L P P S P G + PP
Sbjct: 226 GPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAP 285
Query: 97 PRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGL-----GLHF 151
PPA P V AS H A +P P AP HP SG+ G+H
Sbjct: 286 GVHPPA-PVVHPPASG-VHPPAPGVHPPAPGVHPP-----APGVHPPTSGVHPPAPGVH- 337
Query: 152 PQAPG 156
P APG
Sbjct: 338 PPAPG 342
Score = 31.6 bits (70), Expect = 0.67
Identities = 29/108 (26%), Positives = 38/108 (35%), Gaps = 6/108 (5%)
Query: 38 PRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHP--PSP 95
P + PP+ P H PP+ AP +PA P + P HP P
Sbjct: 352 PPAPGVHPPA----PGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGV 407
Query: 96 RPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPG 143
P+ P PS G H + P +P + R PS PG
Sbjct: 408 HPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPG 455
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 38.5 bits (88), Expect = 0.005
Identities = 43/166 (25%), Positives = 60/166 (36%), Gaps = 36/166 (21%)
Query: 8 AAAGEEAMPMRREVYLEVPSSRFSWKVLPG--PRSGSCFPPSLLWGPDSHFP-------- 57
+A EE +P + PSS P PR+ C P++ GP P
Sbjct: 1058 SAEVEELLPQHLQ-----PSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPS 1112
Query: 58 -----PANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGR--A 110
P+ SS + P P + PA L + PP PRP PP P+ R
Sbjct: 1113 RTPGPPSAQSSPIDAQPATPLPQKDPAQPLE-----PKRPPPPRPVAPPTRPAPPQRPPP 1167
Query: 111 SAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGLGLHFPQAPG 156
+ A S A + P P PGV+ + P++PG
Sbjct: 1168 PSGARSPAPTRKEFGGIGAP---------PSPGVARREMEAPKSPG 1204
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 38.5 bits (88), Expect = 0.005
Identities = 43/166 (25%), Positives = 60/166 (36%), Gaps = 36/166 (21%)
Query: 8 AAAGEEAMPMRREVYLEVPSSRFSWKVLPG--PRSGSCFPPSLLWGPDSHFP-------- 57
+A EE +P + PSS P PR+ C P++ GP P
Sbjct: 1058 SAEVEELLPQHLQ-----PSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPS 1112
Query: 58 -----PANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGR--A 110
P+ SS + P P + PA L + PP PRP PP P+ R
Sbjct: 1113 RTPGPPSAQSSPIDAQPATPLPQKDPAQPLE-----PKRPPPPRPVAPPTRPAPPQRPPP 1167
Query: 111 SAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGLGLHFPQAPG 156
+ A S A + P P PGV+ + P++PG
Sbjct: 1168 PSGARSPAPTRKEFGGIGAP---------PSPGVARREMEAPKSPG 1204
>gi|239745032 PREDICTED: hypothetical protein XP_002343336 [Homo
sapiens]
Length = 828
Score = 38.5 bits (88), Expect = 0.005
Identities = 31/113 (27%), Positives = 38/113 (33%), Gaps = 7/113 (6%)
Query: 38 PRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFL---LSPAQPPASLLSLPYGSHRHPPS 94
P C P L P +H P + S P + + P P+ P H HPP
Sbjct: 15 PPGKICIHPPL--HPPTHSPSIHPSIHPPTHPSIHPSIHPPTHPSIHTHPPIHPHTHPPI 72
Query: 95 PRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGL 147
P P P + S H H S + P P H PS HP L
Sbjct: 73 HPPTHPSIHPLI--HPSIHPSLHPPTHSSIHPSTHPPTHSSIHPSIHPSTHPL 123
Score = 31.6 bits (70), Expect = 0.67
Identities = 28/96 (29%), Positives = 34/96 (35%), Gaps = 14/96 (14%)
Query: 52 PDSH---FPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAG 108
P +H PP +S PL + P+ P P S HP P PP PS+
Sbjct: 130 PSTHSSIHPPTHSHPSTHPL---IHPSIHP------PTHSPIHPSIHPPTHPPTHPSIHS 180
Query: 109 RASAHAHS--HADDASQVSPRRVPAVHRLRAPSPHP 142
HS H S + P P H P HP
Sbjct: 181 SIHLPTHSSIHPPTHSFIHPSIHPPTHSPIHPLTHP 216
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 38.5 bits (88), Expect = 0.005
Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 15/139 (10%)
Query: 2 PRGSTGAAAGEEAMPMRREVYLEVPSSRFSWKVLPGPRSGSCFP--------PSLLWGPD 53
P + +A ++P+ R+ +V S P P P PS G
Sbjct: 402 PPTTAVSAIPSSSIPLGRQPMAQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQP 461
Query: 54 SHFPPANSSSQVAPLP--FLLSPA-QPPASLLSLPYGSHRHPPSPRPRDPPASP----SV 106
S P +N SS AP P FL SP+ QP S ++ + PSP P + P +P S
Sbjct: 462 SSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQNFSVPSPGPLNTPVNPSSVMSP 521
Query: 107 AGRASAHAHSHADDASQVS 125
AG + A + D Q+S
Sbjct: 522 AGSSQAEEQQYLDKLKQLS 540
Score = 29.3 bits (64), Expect = 3.3
Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 20/118 (16%)
Query: 36 PGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSP 95
P + S P S + P P A S + LP L SP+ P + P PP P
Sbjct: 402 PPTTAVSAIPSSSI--PLGRQPMAQVSQ--SSLPMLSSPS--PGQQVQTPQSM---PPPP 452
Query: 96 RPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGLGLHFPQ 153
+P P P S+ +S+ SP L +PSP P S + PQ
Sbjct: 453 QPSPQPGQP------SSQPNSNVSSGPAPSPSSF-----LPSPSPQPSQSPVTARTPQ 499
>gi|56550035 colon carcinoma related protein [Homo sapiens]
Length = 326
Score = 38.5 bits (88), Expect = 0.005
Identities = 36/124 (29%), Positives = 44/124 (35%), Gaps = 16/124 (12%)
Query: 31 SWKVLPGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYG--- 87
S++ P P G P + GP F A+ S PA PPA S PY
Sbjct: 154 SYQPPPAPCLGGVHPDFQVTGPPGTFSAADPSPWPGHNLHQTGPAPPPAVSESWPYPLTS 213
Query: 88 ------SHRHPPSPRPRDPPASPSVAGRASAHAHSHADDASQV-----SPRRVPAVHRLR 136
SH H R P A + R H H H A P +P+VH R
Sbjct: 214 QVSPSYSHMHDVYMRHHHPHAH--MHHRHRHHHHHHHPPAGSALDPSYGPLLMPSVHAAR 271
Query: 137 APSP 140
P+P
Sbjct: 272 IPAP 275
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 38.1 bits (87), Expect = 0.007
Identities = 40/156 (25%), Positives = 54/156 (34%), Gaps = 44/156 (28%)
Query: 8 AAAGEEAMPMRREVYLEVPSSRFSWKVLPG--PRSGSCFPPSLLWGPDSHFP-------- 57
+A EE +P + PSS P PR+ C P++ GP P
Sbjct: 1014 SAEVEELLPQHLQ-----PSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPS 1068
Query: 58 -----PANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASA 112
P+ SS + P P + PA L + PP PRP PP P+
Sbjct: 1069 RTPGPPSAQSSPIDAQPATPLPQKDPAQPLE-----PKRPPPPRPVAPPTRPA------- 1116
Query: 113 HAHSHADDASQVSPRRVPAVHRLRAPSPHPGVSGLG 148
P+R P PSP G++G G
Sbjct: 1117 ------------PPQRPPPPSGRSQPSPQAGLAGPG 1140
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 38.1 bits (87), Expect = 0.007
Identities = 39/116 (33%), Positives = 47/116 (40%), Gaps = 26/116 (22%)
Query: 51 GPDSHFPPANSSSQVAPL--------PFLLSPAQPP--ASLLSLPYGSHRHPPSPRPRDP 100
GP S PP +S++ PL P + P PP AS L +HPP P P
Sbjct: 283 GPASQ-PPVSSATMHLPLVLGPLGGAPTVEGPGAPPFLASSLLSAAAKAQHPPLPPPSTL 341
Query: 101 PASPSVAGRASAHAHSHADDASQVSPRRVPAVHRL--------------RAPSPHP 142
A SA +HS + SQ PRR P V RL RAP+P P
Sbjct: 342 QGRRPRAQAPSA-SHSSSLRPSQRRPRRPPTVFRLLEGRGPQTPRRSRPRAPAPVP 396
Score = 30.4 bits (67), Expect = 1.5
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 14/55 (25%)
Query: 57 PPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPASPSVAGRAS 111
PP + +S + P PA+PP S L+ P+GS DPP + GR S
Sbjct: 814 PPESPASALEP-----EPARPPLSALAPPHGS---------PDPPVPELLTGRGS 854
Score = 28.9 bits (63), Expect = 4.3
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 35 LPGPRSGSCFPPSLLWGPDSHFPPANSSSQVAPLPFLLSPAQ 76
LPG SGS L P + PPA S + V P P L SP++
Sbjct: 461 LPGTTSGS-----LSSVPGAPAPPAASKAPVVPSPVLQSPSE 497
Score = 27.7 bits (60), Expect = 9.6
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 45 PPSLLWG--PDSHFPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSHRHPPSPRPRDPPA 102
PPS L G P + P A+ SS + P P +PP L + P RPR P
Sbjct: 337 PPSTLQGRRPRAQAPSASHSSSLRPSQ--RRPRRPPTVFRLLEGRGPQTPRRSRPRAPAP 394
Query: 103 SP 104
P
Sbjct: 395 VP 396
>gi|239751592 PREDICTED: hypothetical protein XP_002347924 [Homo
sapiens]
Length = 475
Score = 37.4 bits (85), Expect = 0.012
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Query: 52 PDSHFPPANSSSQVAPLPFLLSPAQPPASL-LSLPYGSHRHPPSPRPRDPPASPSVAG-- 108
P H P + S+ + PF+ P PP L + P HP + PP PS+
Sbjct: 124 PSVH-PSTHPSTHPSIHPFIHPPVHPPIHLHIHPPIHPSVHPSTHPLIHPPIHPSIHPPI 182
Query: 109 RASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGV 144
S H +H V P P+ H L P HP +
Sbjct: 183 HPSTHLSTHPSIRPPVHPSTHPSTHPLIHPPIHPPI 218
Score = 32.7 bits (73), Expect = 0.30
Identities = 19/64 (29%), Positives = 24/64 (37%)
Query: 79 ASLLSLPYGSHRHPPSPRPRDPPASPSVAGRASAHAHSHADDASQVSPRRVPAVHRLRAP 138
A+ + P H HPP PP S H H+ + P P+VH P
Sbjct: 65 AASIHPPIHLHIHPPIHPSIHPPMHSSTHPSIHLFIHIHSSTHPSIHPFIHPSVHPSNHP 124
Query: 139 SPHP 142
S HP
Sbjct: 125 SVHP 128
Score = 28.5 bits (62), Expect = 5.6
Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
Query: 52 PDSH-FPPANSSSQVAPLPFLLSPAQPPASLLSLPYGSH--RHPPSPRPRDPPASPSVAG 108
P H F +SS+ + PF+ P+ P++ S+ +H HP PP P +
Sbjct: 94 PSIHLFIHIHSSTHPSIHPFI-HPSVHPSNHPSVHPSTHPSTHPSIHPFIHPPVHPPI-- 150
Query: 109 RASAHAHSHADDASQVSPRRVPAVHRLRAPSPHPGV 144
H H H V P P +H PS HP +
Sbjct: 151 ----HLHIHPPIHPSVHPSTHPLIHPPIHPSIHPPI 182
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,440,759
Number of Sequences: 37866
Number of extensions: 863472
Number of successful extensions: 6919
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 613
Number of HSP's that attempted gapping in prelim test: 5430
Number of HSP's gapped (non-prelim): 1825
length of query: 247
length of database: 18,247,518
effective HSP length: 100
effective length of query: 147
effective length of database: 14,460,918
effective search space: 2125754946
effective search space used: 2125754946
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.