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Search of human proteins with 239757235
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757235 PREDICTED: hypothetical protein [Homo sapiens]
(352 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757235 PREDICTED: hypothetical protein [Homo sapiens] 751 0.0
gi|239751744 PREDICTED: hypothetical protein [Homo sapiens] 745 0.0
gi|40807447 papillary renal cell carcinoma translocation-associa... 38 0.012
gi|40807450 papillary renal cell carcinoma translocation-associa... 38 0.012
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 37 0.020
gi|239747673 PREDICTED: doublecortin domain-containing protein E... 35 0.077
gi|239741542 PREDICTED: doublecortin domain-containing protein E... 35 0.077
gi|28372567 zinc finger protein 575 [Homo sapiens] 35 0.10
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 35 0.13
gi|239753963 PREDICTED: similar to apopolysialoglycoprotein [Hom... 34 0.17
gi|116812624 tau tubulin kinase 2 [Homo sapiens] 34 0.17
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 34 0.23
gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens] 34 0.23
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 34 0.23
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 33 0.29
gi|226437579 NAC alpha domain containing [Homo sapiens] 33 0.50
gi|169210434 PREDICTED: hypothetical protein [Homo sapiens] 33 0.50
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 33 0.50
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 33 0.50
gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 33 0.50
gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Hom... 32 0.66
gi|151301154 mucin 6, gastric [Homo sapiens] 32 0.86
gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [H... 32 0.86
gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [H... 32 0.86
gi|38201702 telomerase reverse transcriptase isoform 2 [Homo sap... 32 1.1
gi|109633031 telomerase reverse transcriptase isoform 1 [Homo sa... 32 1.1
gi|239755142 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens] 31 1.5
gi|187960059 syndecan 3 [Homo sapiens] 31 1.9
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 31 1.9
>gi|239757235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 352
Score = 751 bits (1938), Expect = 0.0
Identities = 352/352 (100%), Positives = 352/352 (100%)
Query: 1 MEKHTAGVCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVA 60
MEKHTAGVCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVA
Sbjct: 1 MEKHTAGVCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVA 60
Query: 61 ATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPFFSLEAAARPEA 120
ATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPFFSLEAAARPEA
Sbjct: 61 ATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPFFSLEAAARPEA 120
Query: 121 IAGLTQCTAHGEPHFPEPSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVS 180
IAGLTQCTAHGEPHFPEPSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVS
Sbjct: 121 IAGLTQCTAHGEPHFPEPSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVS 180
Query: 181 SLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGTPSTYKGHGARTKKLHFPENCSR 240
SLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGTPSTYKGHGARTKKLHFPENCSR
Sbjct: 181 SLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGTPSTYKGHGARTKKLHFPENCSR 240
Query: 241 AKVFRVIPALTQTFPSETWAALAGTAQVLAVASKGAPLIPNPAAMLFTFRSFFFFFWHSF 300
AKVFRVIPALTQTFPSETWAALAGTAQVLAVASKGAPLIPNPAAMLFTFRSFFFFFWHSF
Sbjct: 241 AKVFRVIPALTQTFPSETWAALAGTAQVLAVASKGAPLIPNPAAMLFTFRSFFFFFWHSF 300
Query: 301 AQDDNSQNALWPDCHDCSSPTKGISWKCKGTRICDTNGRSDVRYAPGRTWKY 352
AQDDNSQNALWPDCHDCSSPTKGISWKCKGTRICDTNGRSDVRYAPGRTWKY
Sbjct: 301 AQDDNSQNALWPDCHDCSSPTKGISWKCKGTRICDTNGRSDVRYAPGRTWKY 352
>gi|239751744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 352
Score = 745 bits (1924), Expect = 0.0
Identities = 350/352 (99%), Positives = 350/352 (99%)
Query: 1 MEKHTAGVCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVA 60
MEKHTAGVCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVA
Sbjct: 1 MEKHTAGVCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVA 60
Query: 61 ATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPFFSLEAAARPEA 120
ATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPF SLEAAARPEA
Sbjct: 61 ATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPFLSLEAAARPEA 120
Query: 121 IAGLTQCTAHGEPHFPEPSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVS 180
IAGLTQCTAHGEPHFPE SPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVS
Sbjct: 121 IAGLTQCTAHGEPHFPESSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVS 180
Query: 181 SLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGTPSTYKGHGARTKKLHFPENCSR 240
SLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGTPSTYKGHGARTKKLHFPENCSR
Sbjct: 181 SLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGTPSTYKGHGARTKKLHFPENCSR 240
Query: 241 AKVFRVIPALTQTFPSETWAALAGTAQVLAVASKGAPLIPNPAAMLFTFRSFFFFFWHSF 300
AKVFRVIPALTQTFPSETWAALAGTAQVLAVASKGAPLIPNPAAMLFTFRSFFFFFWHSF
Sbjct: 241 AKVFRVIPALTQTFPSETWAALAGTAQVLAVASKGAPLIPNPAAMLFTFRSFFFFFWHSF 300
Query: 301 AQDDNSQNALWPDCHDCSSPTKGISWKCKGTRICDTNGRSDVRYAPGRTWKY 352
AQDDNSQNALWPDCHDCSSPTKGISWKCKGTRICDTNGRSDVRYAPGRTWKY
Sbjct: 301 AQDDNSQNALWPDCHDCSSPTKGISWKCKGTRICDTNGRSDVRYAPGRTWKY 352
>gi|40807447 papillary renal cell carcinoma translocation-associated
gene product isoform 1 [Homo sapiens]
Length = 491
Score = 38.1 bits (87), Expect = 0.012
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 29 AFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPRARASADLTR 88
AF+R +P +++ +T L+P V T T SP + +A A+ +T+
Sbjct: 203 AFSRKPSDGSPDTKPSRLASKTKTSSLAPVVGTTTTTPSP----SAIKAAAKSAALQVTK 258
Query: 89 RVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNVPEA 148
++ E D E P+ FFSL A P + + + P PE P GT PE
Sbjct: 259 QITQEE---DDSDEEVAPENFFSLPEKAEPPGV----EPYPYPIPTVPEELPPGTE-PEP 310
Query: 149 A 149
A
Sbjct: 311 A 311
>gi|40807450 papillary renal cell carcinoma translocation-associated
gene product isoform 2 [Homo sapiens]
Length = 459
Score = 38.1 bits (87), Expect = 0.012
Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 29 AFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPRARASADLTR 88
AF+R +P +++ +T L+P V T T SP + +A A+ +T+
Sbjct: 203 AFSRKPSDGSPDTKPSRLASKTKTSSLAPVVGTTTTTPSP----SAIKAAAKSAALQVTK 258
Query: 89 RVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNVPEA 148
++ E D E P+ FFSL A P + + + P PE P GT PE
Sbjct: 259 QITQEE---DDSDEEVAPENFFSLPEKAEPPGV----EPYPYPIPTVPEELPPGTE-PEP 310
Query: 149 A 149
A
Sbjct: 311 A 311
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 37.4 bits (85), Expect = 0.020
Identities = 47/198 (23%), Positives = 71/198 (35%), Gaps = 23/198 (11%)
Query: 48 NRARTQGLSPAVAATHTCRSPQQGLTVPQAPRARA-SADLTRRVAGERVTAADLRERHCP 106
N+ R G + A A T Q G A ++ S D ++ ++ + R P
Sbjct: 573 NKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGKKAWRQKAAGTGAKSRKKP 632
Query: 107 KPFFSLEAAARPEAIAGLTQCTAHG----EPHFPEPSPCGTNVP-------EAANRRHPK 155
+AAA +A A T T+ G +P + +P+ G+ EA R+ P+
Sbjct: 633 WRRGQKDAAAAEKAWA--TGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAEARKKPR 690
Query: 156 TTLPKGLCGCADLVRRGQTGHGFVSSLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRN 215
K RG G + W RR + +LG GA SR +R
Sbjct: 691 RRRAKS---------RGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSRG 741
Query: 216 QGTPSTYKGHGARTKKLH 233
G + G A K H
Sbjct: 742 SGGAKSRSGKKAAASKSH 759
>gi|239747673 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 714
Score = 35.4 bits (80), Expect = 0.077
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 32 RLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPR-------ARASA 84
R+ R+ CP P P + AR + SP VA+T + R P + P +PR + AS
Sbjct: 81 RVPRRPVSCPGPEPLALAAR-RSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASG 139
Query: 85 DLTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGL 124
V G R A L R CP+ SL A A E A +
Sbjct: 140 WSGPPVGGARAWAR-LCRRRCPR-CRSLSAPASEERGAAM 177
>gi|239741542 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 510
Score = 35.4 bits (80), Expect = 0.077
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 32 RLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPR-------ARASA 84
R+ R+ CP P P + AR + SP VA+T + R P + P +PR + AS
Sbjct: 81 RVPRRPVSCPGPEPLALAAR-RSQSPRVASTRSLRPPGSPVPSPSSPRPVPVPSPSCASG 139
Query: 85 DLTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGL 124
V G R A L R CP+ SL A A E A +
Sbjct: 140 WSGPPVGGARAWAR-LCRRRCPR-CRSLSAPASEERGAAM 177
>gi|28372567 zinc finger protein 575 [Homo sapiens]
Length = 245
Score = 35.0 bits (79), Expect = 0.10
Identities = 51/222 (22%), Positives = 75/222 (33%), Gaps = 51/222 (22%)
Query: 20 PRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPR 79
PR RRR P + + C + + ++ T L+ A H C P P+
Sbjct: 51 PRPRRRPPP---QRPHRCPDCDKAFSYPSKLATHRLAHGGARPHPC---------PDCPK 98
Query: 80 ARASADLTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPS 139
A + ++A R+T + R CP P++ ++ AH H P
Sbjct: 99 AFSYPS---KLAAHRLTHSGARPHPCPHC---------PKSFGHRSKLAAHLWTHAP--- 143
Query: 140 PCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVSSLTAWGRRPRAGQLGPCAN 199
R +P PK C + L T H A RP PC +
Sbjct: 144 ----------TRPYPCPDCPKSFCYPSKLAAHRHTHH-------ATDARPY-----PCPH 181
Query: 200 CPGAHSRPLVNDTTRNQGTPSTYKGHGARTKKLHFPENCSRA 241
CP A S P R P T G++ H +C +A
Sbjct: 182 CPKAFSFPSKLAAHRLCHDPPT--APGSQATAWHRCSSCGQA 221
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 34.7 bits (78), Expect = 0.13
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 33 LNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQG---LTVPQAPRARASADLT-- 87
L R+ +C PR +R R +PA AA H R + P AP +R+ DL+
Sbjct: 1219 LPRRRARCGCPRSHPHRPRASHRTPAAAAPHHHRHRRAAGGWDLPPPAPTSRSLEDLSSC 1278
Query: 88 -RRVAGERVTAADLRERHCP 106
R R+T R CP
Sbjct: 1279 PRAAPARRLTGPSRHARRCP 1298
>gi|239753963 PREDICTED: similar to apopolysialoglycoprotein [Homo
sapiens]
Length = 538
Score = 34.3 bits (77), Expect = 0.17
Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 15/144 (10%)
Query: 18 TVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQA 77
T+ +R HPA T R+ P S A+ + + ++ R P T+ +A
Sbjct: 182 TMSEAAQRRHPADTMSEAAQRRDPADT-MSEAAQRRDPADTISEAAQRRDPAD--TMSEA 238
Query: 78 PRARASADLTRRVAGERV---TAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPH 134
+ R AD A R T ++ +R P S EAA R + +++ +P
Sbjct: 239 AQRRHPADTMSEAAQRRDPADTISEAAQRRDPADTMS-EAAQRRDPADTISEAAQRRDP- 296
Query: 135 FPEPSPCGTNVPEAANRRHPKTTL 158
+ EAA RRHP T+
Sbjct: 297 -------ADTMSEAAQRRHPADTM 313
Score = 33.1 bits (74), Expect = 0.38
Identities = 39/162 (24%), Positives = 59/162 (36%), Gaps = 18/162 (11%)
Query: 3 KHTAGVCSRA---HFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAV 59
+H A S A T+ +R HPA T R+ P + Q PA
Sbjct: 99 RHPADTMSEAVQRRHPADTMSEAAQRRHPADTMSEAAQRRHPAD---TMSEAVQRRHPAD 155
Query: 60 AATHTCRSPQQGLTVPQAPRARASADLTRRVAGERV---TAADLRERHCPKPFFSLEAAA 116
+ + T+ +A + R AD A R T ++ +R P S EAA
Sbjct: 156 TMSEAVQRRDPADTMSEAVQRRHPADTMSEAAQRRHPADTMSEAAQRRDPADTMS-EAAQ 214
Query: 117 RPEAIAGLTQCTAHGEPHFPEPSPCGTNVPEAANRRHPKTTL 158
R + +++ +P + EAA RRHP T+
Sbjct: 215 RRDPADTISEAAQRRDP--------ADTMSEAAQRRHPADTM 248
Score = 32.3 bits (72), Expect = 0.66
Identities = 35/144 (24%), Positives = 53/144 (36%), Gaps = 15/144 (10%)
Query: 18 TVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQA 77
T+ +R HPA T R+ P + Q PA + + T+ +A
Sbjct: 299 TMSEAAQRRHPADTMSEAAQRRDPAD---TMSEAAQRRDPADTMSEAVQRRHPADTMSEA 355
Query: 78 PRARASADLTRRVAGERV---TAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPH 134
+ R AD A R T ++ +R P S EAA R + +++ P
Sbjct: 356 VQRRHPADTMSEAAQRRDPADTMSEAAQRRHPADTMS-EAAQRRDPADTMSEAAQRRHP- 413
Query: 135 FPEPSPCGTNVPEAANRRHPKTTL 158
+ EAA RRHP T+
Sbjct: 414 -------ADTMSEAAQRRHPADTM 430
Score = 32.0 bits (71), Expect = 0.86
Identities = 35/143 (24%), Positives = 53/143 (37%), Gaps = 15/143 (10%)
Query: 18 TVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQA 77
T+ +R HPA T R+ P + Q PA + + T+ +A
Sbjct: 338 TMSEAVQRRHPADTMSEAVQRRHPAD---TMSEAAQRRDPADTMSEAAQRRHPADTMSEA 394
Query: 78 PRARASADLTRRVAGERV---TAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPH 134
+ R AD A R T ++ +R P S EAA R + +++ +P
Sbjct: 395 AQRRDPADTMSEAAQRRHPADTMSEAAQRRHPADTMS-EAAQRRDPADTMSEAAQRRDP- 452
Query: 135 FPEPSPCGTNVPEAANRRHPKTT 157
+ EAA RRHP T
Sbjct: 453 -------ADTMSEAAQRRHPADT 468
Score = 30.0 bits (66), Expect = 3.3
Identities = 35/144 (24%), Positives = 51/144 (35%), Gaps = 15/144 (10%)
Query: 18 TVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQA 77
T+ +R HPA T R+ P + Q PA + + T+ +A
Sbjct: 65 TMSEAAQRRHPADTMSEAVQRRHPAD---TMSEAAQRRHPADTMSEAVQRRHPADTMSEA 121
Query: 78 PRARASADLTRRVAGERVTAADLRE---RHCPKPFFSLEAAARPEAIAGLTQCTAHGEPH 134
+ R AD A R A + E R P S EA R + +++ P
Sbjct: 122 AQRRHPADTMSEAAQRRHPADTMSEAVQRRHPADTMS-EAVQRRDPADTMSEAVQRRHP- 179
Query: 135 FPEPSPCGTNVPEAANRRHPKTTL 158
+ EAA RRHP T+
Sbjct: 180 -------ADTMSEAAQRRHPADTM 196
Score = 28.9 bits (63), Expect = 7.3
Identities = 33/148 (22%), Positives = 52/148 (35%), Gaps = 15/148 (10%)
Query: 18 TVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQA 77
T+ +R HPA T R+ P + Q PA + + T+ +A
Sbjct: 13 TMSEAVQRRHPADTMSEAAQRRHPAD---TTSEAAQRRHPADTTSEPVQRRHPADTMSEA 69
Query: 78 PRARASADLTRRVAGERV---TAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPH 134
+ R AD R T ++ +R P S EA R +++ P
Sbjct: 70 AQRRHPADTMSEAVQRRHPADTMSEAAQRRHPADTMS-EAVQRRHPADTMSEAAQRRHP- 127
Query: 135 FPEPSPCGTNVPEAANRRHPKTTLPKGL 162
+ EAA RRHP T+ + +
Sbjct: 128 -------ADTMSEAAQRRHPADTMSEAV 148
>gi|116812624 tau tubulin kinase 2 [Homo sapiens]
Length = 1244
Score = 34.3 bits (77), Expect = 0.17
Identities = 50/200 (25%), Positives = 76/200 (38%), Gaps = 29/200 (14%)
Query: 39 KCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPRARASADLTRR---VAGERV 95
K PRP W N T ++ + ++ R P P P R + R V G
Sbjct: 1052 KIPRPVSWVN---TDQVNSSTSSQFFPRPP------PGKPPTRPGVEARLRRYKVLGSSN 1102
Query: 96 TAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNVPEAANRRHPK 155
+ +DL R + +P + TQC + G PH P+ P VP + P+
Sbjct: 1103 SDSDLFSRLAQ---ILQNGSQKPRST---TQCKSPGSPHNPKTPPKSPVVPRRSPSASPR 1156
Query: 156 -TTLPKGLCGCADLVRRGQTGHGFVSSLTAWGRR----PRAGQLGPCANCPGAHSRPLVN 210
++LP+ + R G+ H SS GR +G +C H +P N
Sbjct: 1157 SSSLPR--TSSSSPSRAGRPHHDQRSSSPHLGRSKSPPSHSGSSSSRRSCQQEHCKPSKN 1214
Query: 211 DTTRNQGTPSTYKGHGARTK 230
+G+ S + H A TK
Sbjct: 1215 GL---KGSGSLHH-HSASTK 1230
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 33.9 bits (76), Expect = 0.23
Identities = 33/135 (24%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 76 QAPRARASADLTRRVAGERVTAADLRERH---CPKPFFSLEAAARPEAIAGLTQCTAHGE 132
Q P A ++ V DL+ +H P P PEA+ + + G
Sbjct: 859 QVPSAEDEPAPKKQKLSASVKKEDLKSKHDSSAPDPAPDSADEVMPEAVPEVA--SEPGL 916
Query: 133 PHFPEPSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVSSLTAWGRRPRAG 192
P+ T P HP+ + + L C G G V+++T GR PR
Sbjct: 917 ESASHPNVDRTYFPGPPGDGHPEPSPLEDLSPCP-----ASCGSGVVTTVTVSGRDPRTA 971
Query: 193 QLGPCANCPGAHSRP 207
C A SRP
Sbjct: 972 PSSSCTAVASAASRP 986
>gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]
Length = 1189
Score = 33.9 bits (76), Expect = 0.23
Identities = 33/135 (24%), Positives = 47/135 (34%), Gaps = 10/135 (7%)
Query: 76 QAPRARASADLTRRVAGERVTAADLRERH---CPKPFFSLEAAARPEAIAGLTQCTAHGE 132
Q P A ++ V DL+ +H P P PEA+ + + G
Sbjct: 859 QVPSAEDEPAPKKQKLSASVKKEDLKSKHDSSAPDPAPDSADEVMPEAVPEVA--SEPGL 916
Query: 133 PHFPEPSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGHGFVSSLTAWGRRPRAG 192
P+ T P HP+ + + L C G G V+++T GR PR
Sbjct: 917 ESASHPNVDRTYFPGPPGDGHPEPSPLEDLSPCP-----ASCGSGVVTTVTVSGRDPRTA 971
Query: 193 QLGPCANCPGAHSRP 207
C A SRP
Sbjct: 972 PSSSCTAVASAASRP 986
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 33.9 bits (76), Expect = 0.23
Identities = 58/236 (24%), Positives = 85/236 (36%), Gaps = 27/236 (11%)
Query: 10 SRAHFALTTVPRGRRRHHPAFTRLNRKAR--KCPRPRPWSN---------RARTQGLSPA 58
SR ALT + G R P+ + AR + P P P + +R S A
Sbjct: 2179 SRIALALTAISLGTARPPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAA 2238
Query: 59 VAATHTCRSP----QQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCP-KPFFSLE 113
+ R+P L + P A A+ +L +A +L + P P +L
Sbjct: 2239 AMNLASARTPAIPTAVNLADSRTPAAAAAMNLASPRTAVAPSAVNLADPRTPTAPAVNLA 2298
Query: 114 AAARPEAIAGLTQCTAHGEPHFPEPSPCGTNVPEA---ANRRHPKT---TLPKGLCG--- 164
A P A+A L+ T G P P + P+A AN P++ T P + G
Sbjct: 2299 GARTPAALAALS-LTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRT 2357
Query: 165 CADLVRRGQTGHGFVSSLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGTPS 220
A L T +L+ L G S PL+ D R++ PS
Sbjct: 2358 AAALAPASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLL-DRARSRTPPS 2412
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 33.5 bits (75), Expect = 0.29
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 765 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 824
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 825 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTA 884
Query: 146 P 146
P
Sbjct: 885 P 885
Score = 32.7 bits (73), Expect = 0.50
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 645 PLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 704
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 705 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTP 764
Query: 146 P 146
P
Sbjct: 765 P 765
Score = 32.3 bits (72), Expect = 0.66
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 605 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAAT 664
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 665 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTP 724
Query: 146 P 146
P
Sbjct: 725 P 725
Score = 32.0 bits (71), Expect = 0.86
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 685 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 744
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 745 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTP 804
Query: 146 P 146
P
Sbjct: 805 P 805
Score = 31.6 bits (70), Expect = 1.1
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 725 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 784
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
+ + A E +T P P + ++ P+ +A T + E P
Sbjct: 785 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTP 844
Query: 146 P 146
P
Sbjct: 845 P 845
Score = 30.4 bits (67), Expect = 2.5
Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 17/110 (15%)
Query: 54 GLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASADLTRRVAGERVT 96
G P AAT R ++ LT+PQ AP+ A+A + + A E +T
Sbjct: 576 GRKPVAAATIVPRQAEEDLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLT 635
Query: 97 AADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNVP 146
P P E ++ P+ +A T + E P P
Sbjct: 636 LPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPP 685
Score = 28.9 bits (63), Expect = 7.3
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 805 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 864
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGE 132
+ A E +T P P + PE +A T T E
Sbjct: 865 PVSQQAEEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQTLQAE 911
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 32.7 bits (73), Expect = 0.50
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 645 PLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 704
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 705 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTP 764
Query: 146 P 146
P
Sbjct: 765 P 765
Score = 32.3 bits (72), Expect = 0.66
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 605 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAAT 664
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 665 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTP 724
Query: 146 P 146
P
Sbjct: 725 P 725
Score = 32.0 bits (71), Expect = 0.86
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 685 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 744
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 745 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTP 804
Query: 146 P 146
P
Sbjct: 805 P 805
Score = 32.0 bits (71), Expect = 0.86
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 765 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 824
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
+ + A E +T P P + ++ P+ +A T + E P
Sbjct: 825 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTP 884
Query: 146 P 146
P
Sbjct: 885 P 885
Score = 31.2 bits (69), Expect = 1.5
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 725 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 784
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
+ + A E +T P P + ++ P+ +A T + E P
Sbjct: 785 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTP 844
Query: 146 P 146
P
Sbjct: 845 P 845
Score = 30.8 bits (68), Expect = 1.9
Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 805 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 864
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
+ A E +T P P + ++ P+ +A T + E P
Sbjct: 865 PVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTA 924
Query: 146 P 146
P
Sbjct: 925 P 925
Score = 30.0 bits (66), Expect = 3.3
Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 17/110 (15%)
Query: 54 GLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASADLTRRVAGERVT 96
G P AAT R ++ LT+PQ AP+ A+A + + A E +T
Sbjct: 576 GRKPVAAATIVPRQAKEDLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLT 635
Query: 97 AADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNVP 146
P P E ++ P+ +A T + E P P
Sbjct: 636 LPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPP 685
Score = 29.3 bits (64), Expect = 5.6
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 845 PLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 904
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGE 132
+ A E +T P P + PE +A T T E
Sbjct: 905 PVSQQAEEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQTLQAE 951
>gi|169210434 PREDICTED: hypothetical protein [Homo sapiens]
Length = 301
Score = 32.7 bits (73), Expect = 0.50
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 155 KTTLPKGLCGCADLVRRGQTGHGFVSSLTAWGRRPRAGQLGPCANCPGAHSRP 207
+T KG G + RRG G S+ +GR P A + GP A GA + P
Sbjct: 105 RTRAQKG--GKGEETRRGPAPAGLTPSVCLYGRAPTASRTGPGAPAEGARAAP 155
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 32.7 bits (73), Expect = 0.50
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 645 PLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 704
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 705 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTP 764
Query: 146 P 146
P
Sbjct: 765 P 765
Score = 32.7 bits (73), Expect = 0.50
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 765 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 824
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
+ + A E +T P P + ++ P+ +A T + E P
Sbjct: 825 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTA 884
Query: 146 P 146
P
Sbjct: 885 P 885
Score = 32.3 bits (72), Expect = 0.66
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 605 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAAT 664
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 665 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTP 724
Query: 146 P 146
P
Sbjct: 725 P 725
Score = 32.0 bits (71), Expect = 0.86
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 685 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 744
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 745 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTP 804
Query: 146 P 146
P
Sbjct: 805 P 805
Score = 31.2 bits (69), Expect = 1.5
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 725 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 784
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
+ + A E +T P P + ++ P+ +A T + E P
Sbjct: 785 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTP 844
Query: 146 P 146
P
Sbjct: 845 P 845
Score = 30.0 bits (66), Expect = 3.3
Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 17/110 (15%)
Query: 54 GLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASADLTRRVAGERVT 96
G P AAT R ++ LT+PQ AP+ A+A + + A E +T
Sbjct: 576 GRKPVAAATIVPRQAKEDLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLT 635
Query: 97 AADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNVP 146
P P E ++ P+ +A T + E P P
Sbjct: 636 LPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPP 685
Score = 28.9 bits (63), Expect = 7.3
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 805 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 864
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGE 132
+ A E +T P P + PE +A T T E
Sbjct: 865 PVSQQAEEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQTLQAE 911
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 32.7 bits (73), Expect = 0.50
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 645 PLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 704
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 705 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTP 764
Query: 146 P 146
P
Sbjct: 765 P 765
Score = 32.3 bits (72), Expect = 0.66
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 605 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAAT 664
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 665 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTP 724
Query: 146 P 146
P
Sbjct: 725 P 725
Score = 32.0 bits (71), Expect = 0.86
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 685 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 744
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 745 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTP 804
Query: 146 P 146
P
Sbjct: 805 P 805
Score = 32.0 bits (71), Expect = 0.86
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 765 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 824
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
+ + A E +T P P + ++ P+ +A T + E P
Sbjct: 825 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTP 884
Query: 146 P 146
P
Sbjct: 885 P 885
Score = 31.2 bits (69), Expect = 1.5
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 725 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 784
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
+ + A E +T P P + ++ P+ +A T + E P
Sbjct: 785 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTP 844
Query: 146 P 146
P
Sbjct: 845 P 845
Score = 30.8 bits (68), Expect = 1.9
Identities = 26/121 (21%), Positives = 42/121 (34%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 805 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 864
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
+ A E +T P P + ++ P+ +A T + E P
Sbjct: 865 PVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTA 924
Query: 146 P 146
P
Sbjct: 925 P 925
Score = 30.0 bits (66), Expect = 3.3
Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 17/110 (15%)
Query: 54 GLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASADLTRRVAGERVT 96
G P AAT R ++ LT+PQ AP+ A+A + + A E +T
Sbjct: 576 GRKPVAAATIVPRQAKEDLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLT 635
Query: 97 AADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNVP 146
P P E ++ P+ +A T + E P P
Sbjct: 636 LPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPP 685
Score = 29.3 bits (64), Expect = 5.6
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 845 PLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 904
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGE 132
+ A E +T P P + PE +A T T E
Sbjct: 905 PVSQQAEEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQTLQAE 951
>gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 32.7 bits (73), Expect = 0.50
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 645 PLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 704
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 705 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTP 764
Query: 146 P 146
P
Sbjct: 765 P 765
Score = 32.7 bits (73), Expect = 0.50
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 765 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 824
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
+ + A E +T P P + ++ P+ +A T + E P
Sbjct: 825 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTA 884
Query: 146 P 146
P
Sbjct: 885 P 885
Score = 32.3 bits (72), Expect = 0.66
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 605 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAAT 664
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 665 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTP 724
Query: 146 P 146
P
Sbjct: 725 P 725
Score = 32.0 bits (71), Expect = 0.86
Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 685 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 744
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
L + A E +T P P + ++ P+ +A T + E P
Sbjct: 745 LVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTP 804
Query: 146 P 146
P
Sbjct: 805 P 805
Score = 31.2 bits (69), Expect = 1.5
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 17/121 (14%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 725 PLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 784
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNV 145
+ + A E +T P P + ++ P+ +A T + E P
Sbjct: 785 IVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTP 844
Query: 146 P 146
P
Sbjct: 845 P 845
Score = 30.0 bits (66), Expect = 3.3
Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 17/110 (15%)
Query: 54 GLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASADLTRRVAGERVT 96
G P AAT R ++ LT+PQ AP+ A+A + + A E +T
Sbjct: 576 GRKPVAAATIVPRQAKEDLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLT 635
Query: 97 AADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNVP 146
P P E ++ P+ +A T + E P P
Sbjct: 636 LPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPP 685
Score = 28.9 bits (63), Expect = 7.3
Identities = 26/107 (24%), Positives = 38/107 (35%), Gaps = 17/107 (15%)
Query: 43 PRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQ-----------------APRARASAD 85
P P + + P AAT + ++GLT+PQ AP+ A+A
Sbjct: 805 PLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAAT 864
Query: 86 LTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGE 132
+ A E +T P P + PE +A T T E
Sbjct: 865 PVSQQAEEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQTLQAE 911
>gi|239753271 PREDICTED: similar to ankyrin repeat domain 36 [Homo
sapiens]
Length = 501
Score = 32.3 bits (72), Expect = 0.66
Identities = 28/113 (24%), Positives = 41/113 (36%), Gaps = 8/113 (7%)
Query: 122 AGLTQCTAHGEPH-----FPEPSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGH 176
+G T+ +PH P C V + R + P G G + R TG
Sbjct: 223 SGATRPKTGAQPHPGGCGVPSARSCALGVGQEQLARAAQPMGPLGAAGRSSGKPRQPTGA 282
Query: 177 GFVSSLTAWGRRPRAGQLG-PCANCPGAHSRPLVNDTTRNQGTPSTYKGHGAR 228
++ + W R PR LG P C + + P + +Q GHG R
Sbjct: 283 AAAAATSTWSRGPRG--LGIPDQACASSRADPGASLAAASQAVCGRSAGHGLR 333
Score = 29.3 bits (64), Expect = 5.6
Identities = 25/94 (26%), Positives = 33/94 (35%)
Query: 47 SNRARTQGLSPAVAATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCP 106
S + R + A AAT T +GL +P A + AD +A H
Sbjct: 273 SGKPRQPTGAAAAAATSTWSRGPRGLGIPDQACASSRADPGASLAAASQAVCGRSAGHGL 332
Query: 107 KPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSP 140
+P RP+ A Q EP P P P
Sbjct: 333 RPGVQEARTLRPDGGALRAQEAIPREPRQPPPEP 366
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 32.0 bits (71), Expect = 0.86
Identities = 37/179 (20%), Positives = 57/179 (31%), Gaps = 25/179 (13%)
Query: 43 PRPWSNRARTQGL-SPAVAATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLR 101
P P SN +P + AT T P P P + T + +
Sbjct: 1238 PSPSSNHTPASPTQTPLLPATLTSSKPTASSGEPPRPTTAVTPQATSGLPPTATLRSTAT 1297
Query: 102 ERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGTN--VPEAANRRHPKTTLP 159
+ + A+ A Q T P P+ GT+ +P++ N+ P TT
Sbjct: 1298 KPTVTQATTRATASTASPATTSTAQSTTRTTMTLPTPATSGTSPTLPKSTNQELPGTT-- 1355
Query: 160 KGLCGCADLVRRGQTGHGFVSSLTAWGRRPRAGQLGPCANCPGAHSRPLVNDTTRNQGT 218
++ T R A GP PG +RP +TT+ + T
Sbjct: 1356 --------------------ATQTTGPRPTPASTTGPTTPQPGQPTRPTATETTQTRTT 1394
>gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [Homo
sapiens]
Length = 533
Score = 32.0 bits (71), Expect = 0.86
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 23/125 (18%)
Query: 28 PAFTRLNRKARKCPRPRP----WSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPRARAS 83
PA ++ R+AR PRPR W +R L+P + H +S L + + AR
Sbjct: 4 PASRQVRRRARAAPRPRSAEDWWWDR-----LAPRGSGYHLLQSDSMLLVLSEPGPARPR 58
Query: 84 ADLTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGT 143
A +R A R +P AAA+P+ AGL A P P+P
Sbjct: 59 A---QRRASRRTPR---------QPPRGPSAAAKPK--AGLRSEAAAAPAPAPAPTPTPE 104
Query: 144 NVPEA 148
P+A
Sbjct: 105 EGPDA 109
>gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [Homo
sapiens]
Length = 539
Score = 32.0 bits (71), Expect = 0.86
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 23/125 (18%)
Query: 28 PAFTRLNRKARKCPRPRP----WSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPRARAS 83
PA ++ R+AR PRPR W +R L+P + H +S L + + AR
Sbjct: 4 PASRQVRRRARAAPRPRSAEDWWWDR-----LAPRGSGYHLLQSDSMLLVLSEPGPARPR 58
Query: 84 ADLTRRVAGERVTAADLRERHCPKPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSPCGT 143
A +R A R +P AAA+P+ AGL A P P+P
Sbjct: 59 A---QRRASRRTPR---------QPPRGPSAAAKPK--AGLRSEAAAAPAPAPAPTPTPE 104
Query: 144 NVPEA 148
P+A
Sbjct: 105 EGPDA 109
>gi|38201702 telomerase reverse transcriptase isoform 2 [Homo
sapiens]
Length = 1120
Score = 31.6 bits (70), Expect = 1.1
Identities = 33/133 (24%), Positives = 50/133 (37%), Gaps = 12/133 (9%)
Query: 8 VCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLS---PAVAATHT 64
VC + L + R H + R R+ R W++ R G+ PA A
Sbjct: 170 VCGPPLYQLGAATQARPPPHASGPR-----RRLGCERAWNHSVREAGVPLGLPAPGARRR 224
Query: 65 CRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPFFSLEAAARP----EA 120
S + L +P+ PR A+ + R G+ A R R F + + ARP +
Sbjct: 225 GGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATS 284
Query: 121 IAGLTQCTAHGEP 133
+ G T H P
Sbjct: 285 LEGALSGTRHSHP 297
>gi|109633031 telomerase reverse transcriptase isoform 1 [Homo
sapiens]
Length = 1132
Score = 31.6 bits (70), Expect = 1.1
Identities = 33/133 (24%), Positives = 50/133 (37%), Gaps = 12/133 (9%)
Query: 8 VCSRAHFALTTVPRGRRRHHPAFTRLNRKARKCPRPRPWSNRARTQGLS---PAVAATHT 64
VC + L + R H + R R+ R W++ R G+ PA A
Sbjct: 170 VCGPPLYQLGAATQARPPPHASGPR-----RRLGCERAWNHSVREAGVPLGLPAPGARRR 224
Query: 65 CRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPFFSLEAAARP----EA 120
S + L +P+ PR A+ + R G+ A R R F + + ARP +
Sbjct: 225 GGSASRSLPLPKRPRRGAAPEPERTPVGQGSWAHPGRTRGPSDRGFCVVSPARPAEEATS 284
Query: 121 IAGLTQCTAHGEP 133
+ G T H P
Sbjct: 285 LEGALSGTRHSHP 297
>gi|239755142 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 31.6 bits (70), Expect = 1.1
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 37 ARKCPRPRPWSNRARTQGLSPAVAATHTCRSPQQGLTVPQAPRARASADLTRRVAGE 93
AR+C RP ++ L+ A RSP +G T +P AR +AD R A E
Sbjct: 111 ARRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATSSLSPIARGAADTGVRSAAE 167
>gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
Length = 753
Score = 31.2 bits (69), Expect = 1.5
Identities = 59/255 (23%), Positives = 82/255 (32%), Gaps = 43/255 (16%)
Query: 47 SNRARTQGLSPAVAATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCP 106
S + R + A AAT T +GL +P A + AD +A H
Sbjct: 83 SGKPRQPTGAAAAAATSTWSRGPRGLGIPDQACASSRADPGASLAAASQAVCGRSAGHGL 142
Query: 107 KPFFSLEAAARPEAIAGLTQCTAHGEPHFPEPSP---CGTNVPE---------AANRRHP 154
P RP+ A Q EP P P P C V ++R P
Sbjct: 143 PPGVQEARTLRPDGGALRAQEAIPREPRQPPPEPELQCRLQVVRWLQLWQPRIPSSRLAP 202
Query: 155 KTTLPKG------LCGCADLVRRGQT-----------GHGFVSSLTAWGRRPRAGQLGPC 197
+ P G CG + RR T G S + W RR R QL
Sbjct: 203 ISADPGGDAVAKWGCGPSGGTRRRSTTQPHPWAAEGPARGTPSVGSLWKRRARGRQL--- 259
Query: 198 ANCPGAHSRPLVNDTTRNQGT---PSTYKGHGARTKKLHFPENC--SRAKV-----FRVI 247
N P +R + ++GT + G + + P C AKV + +
Sbjct: 260 -NRPWGRARLALQGAPPSRGTSAATAACTGRARAARAVSLPRACWAGPAKVRVLAGYNLQ 318
Query: 248 PALTQTFPSETWAAL 262
P + + E W L
Sbjct: 319 PTIKEDDERERWPTL 333
Score = 29.3 bits (64), Expect = 5.6
Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 8/111 (7%)
Query: 122 AGLTQCTAHGEPH-----FPEPSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRGQTGH 176
+G T+ +PH P C + R + P G G + R TG
Sbjct: 33 SGATRPKTGAQPHPRGCRVPSVRSCALGAGQEQLARAAQPVGPLGAAGRSSGKPRQPTGA 92
Query: 177 GFVSSLTAWGRRPRAGQLG-PCANCPGAHSRPLVNDTTRNQGTPSTYKGHG 226
++ + W R PR LG P C + + P + +Q GHG
Sbjct: 93 AAAAATSTWSRGPRG--LGIPDQACASSRADPGASLAAASQAVCGRSAGHG 141
>gi|187960059 syndecan 3 [Homo sapiens]
Length = 442
Score = 30.8 bits (68), Expect = 1.9
Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 8/112 (7%)
Query: 52 TQGLSPAVAATHTCRSPQQGLTVPQAPRARASADLTRRVAGERVTAADLRERHCPKPFFS 111
T P A T R+ +P A+A T A T A + + P P
Sbjct: 190 TPAAPPFTATTAVIRTTGVRRLLPLPLTTVATARATTPEAPSPPTTAAVLDTEAPTPRLV 249
Query: 112 LEAAARPEAIAGLTQCTAHGEPHFPEPS--PCGTNVP---EAANRRHPKTTL 158
A +RP A L + EP PE S P GT P E A P+T L
Sbjct: 250 STATSRPRA---LPRPATTQEPDIPERSTLPLGTTAPGPTEVAQTPTPETFL 298
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 30.8 bits (68), Expect = 1.9
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 14/117 (11%)
Query: 113 EAAARPEAIAGLTQCTAHGEPHFPEPSPCGTNVPEAANRRHPKTTLPKGLCGCADLVRRG 172
+ ++RP A G + G+P + P G+ + + R P+ T + G
Sbjct: 827 QTSSRPPASVGELSSSGLGDPRLQKGHPTGSRLADPRLSRDPRLT--------RHVEASG 878
Query: 173 QTGHGFVSSLTAWGRRPRAGQLGPCANCPGA-HSRPLVNDTTRNQGTPSTYKGHGAR 228
+G G + PR + P + G+ HS P+ +++ G P T + G R
Sbjct: 879 GSGPG-----DSGPSDPRLARALPTSKPEGSLHSSPVGPSSSKGSGPPPTEEEEGER 930
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.133 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,232,505
Number of Sequences: 37866
Number of extensions: 850424
Number of successful extensions: 2636
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 2525
Number of HSP's gapped (non-prelim): 132
length of query: 352
length of database: 18,247,518
effective HSP length: 103
effective length of query: 249
effective length of database: 14,347,320
effective search space: 3572482680
effective search space used: 3572482680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.