Guide to the Human Genome
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Search of human proteins with 239756880

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756880 PREDICTED: hypothetical protein [Homo sapiens]
         (376 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756880 PREDICTED: hypothetical protein [Homo sapiens]           783   0.0  
gi|239751374 PREDICTED: hypothetical protein XP_002347830 [Homo ...   783   0.0  
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ...    40   0.003
gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo ...    40   0.003
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    37   0.029
gi|55749804 aminopeptidase Fxna [Homo sapiens]                         37   0.029
gi|239747614 PREDICTED: similar to Putative uncharacterized prot...    37   0.038
gi|116812575 high glucose-regulated protein 8 [Homo sapiens]           37   0.038
gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]            36   0.049
gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo ...    36   0.049
gi|91208420 bassoon protein [Homo sapiens]                             36   0.049
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom...    36   0.049
gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo ...    36   0.065
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]            36   0.065
gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo ...    36   0.065
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ...    36   0.065
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    36   0.065
gi|38158015 mastermind-like 3 [Homo sapiens]                           36   0.065
gi|155029552 hypothetical protein LOC388115 [Homo sapiens]             35   0.084
gi|239741968 PREDICTED: hypothetical protein [Homo sapiens]            35   0.11 
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ...    35   0.11 
gi|149408146 TOX high mobility group box family member 2 isoform...    35   0.14 
gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]                35   0.14 
gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo sa...    34   0.19 
gi|239755298 PREDICTED: hypothetical protein [Homo sapiens]            34   0.19 
gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo ...    34   0.19 
gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo ...    34   0.19 
gi|149408144 TOX high mobility group box family member 2 isoform...    34   0.25 
gi|149408141 TOX high mobility group box family member 2 isoform...    34   0.25 
gi|14249636 TOX high mobility group box family member 2 isoform ...    34   0.25 

>gi|239756880 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 376

 Score =  783 bits (2021), Expect = 0.0
 Identities = 376/376 (100%), Positives = 376/376 (100%)

Query: 1   MKSGLDLEPLPTWLGCQCWSRMRGTWALSTRGGSRSPVCTLNMGRVESGRGTSRLAAICR 60
           MKSGLDLEPLPTWLGCQCWSRMRGTWALSTRGGSRSPVCTLNMGRVESGRGTSRLAAICR
Sbjct: 1   MKSGLDLEPLPTWLGCQCWSRMRGTWALSTRGGSRSPVCTLNMGRVESGRGTSRLAAICR 60

Query: 61  SSSVFPWMVQWWTIWMLEAQVGSHQLWESAALEYSLELPLSHPAVLPTTYSPPKAERKRL 120
           SSSVFPWMVQWWTIWMLEAQVGSHQLWESAALEYSLELPLSHPAVLPTTYSPPKAERKRL
Sbjct: 61  SSSVFPWMVQWWTIWMLEAQVGSHQLWESAALEYSLELPLSHPAVLPTTYSPPKAERKRL 120

Query: 121 AGVEGSTSSASWLRTRNSAWPLNAPSITDPNKPSPNSLCNAANPSSVGPPHLHLTTPKSC 180
           AGVEGSTSSASWLRTRNSAWPLNAPSITDPNKPSPNSLCNAANPSSVGPPHLHLTTPKSC
Sbjct: 121 AGVEGSTSSASWLRTRNSAWPLNAPSITDPNKPSPNSLCNAANPSSVGPPHLHLTTPKSC 180

Query: 181 PLILGLPAEQGPNLPTRRGVQKSVSAMAARPGPPDSTHIFLPCPVRRLQRNNKDCDLASP 240
           PLILGLPAEQGPNLPTRRGVQKSVSAMAARPGPPDSTHIFLPCPVRRLQRNNKDCDLASP
Sbjct: 181 PLILGLPAEQGPNLPTRRGVQKSVSAMAARPGPPDSTHIFLPCPVRRLQRNNKDCDLASP 240

Query: 241 PREGAFAGASPVLRLRDVGTERESGAGCLRSAPPRAGDARQQTQRCQSPSGGCEKGSRSV 300
           PREGAFAGASPVLRLRDVGTERESGAGCLRSAPPRAGDARQQTQRCQSPSGGCEKGSRSV
Sbjct: 241 PREGAFAGASPVLRLRDVGTERESGAGCLRSAPPRAGDARQQTQRCQSPSGGCEKGSRSV 300

Query: 301 SGSRRSEPRPPAGLGDARAASPADTVSDDVSRRHRGCFAGRARAPTGPRRRFANLGGGDR 360
           SGSRRSEPRPPAGLGDARAASPADTVSDDVSRRHRGCFAGRARAPTGPRRRFANLGGGDR
Sbjct: 301 SGSRRSEPRPPAGLGDARAASPADTVSDDVSRRHRGCFAGRARAPTGPRRRFANLGGGDR 360

Query: 361 TRPLGLLKRGWLSSAA 376
           TRPLGLLKRGWLSSAA
Sbjct: 361 TRPLGLLKRGWLSSAA 376


>gi|239751374 PREDICTED: hypothetical protein XP_002347830 [Homo
           sapiens]
          Length = 376

 Score =  783 bits (2021), Expect = 0.0
 Identities = 376/376 (100%), Positives = 376/376 (100%)

Query: 1   MKSGLDLEPLPTWLGCQCWSRMRGTWALSTRGGSRSPVCTLNMGRVESGRGTSRLAAICR 60
           MKSGLDLEPLPTWLGCQCWSRMRGTWALSTRGGSRSPVCTLNMGRVESGRGTSRLAAICR
Sbjct: 1   MKSGLDLEPLPTWLGCQCWSRMRGTWALSTRGGSRSPVCTLNMGRVESGRGTSRLAAICR 60

Query: 61  SSSVFPWMVQWWTIWMLEAQVGSHQLWESAALEYSLELPLSHPAVLPTTYSPPKAERKRL 120
           SSSVFPWMVQWWTIWMLEAQVGSHQLWESAALEYSLELPLSHPAVLPTTYSPPKAERKRL
Sbjct: 61  SSSVFPWMVQWWTIWMLEAQVGSHQLWESAALEYSLELPLSHPAVLPTTYSPPKAERKRL 120

Query: 121 AGVEGSTSSASWLRTRNSAWPLNAPSITDPNKPSPNSLCNAANPSSVGPPHLHLTTPKSC 180
           AGVEGSTSSASWLRTRNSAWPLNAPSITDPNKPSPNSLCNAANPSSVGPPHLHLTTPKSC
Sbjct: 121 AGVEGSTSSASWLRTRNSAWPLNAPSITDPNKPSPNSLCNAANPSSVGPPHLHLTTPKSC 180

Query: 181 PLILGLPAEQGPNLPTRRGVQKSVSAMAARPGPPDSTHIFLPCPVRRLQRNNKDCDLASP 240
           PLILGLPAEQGPNLPTRRGVQKSVSAMAARPGPPDSTHIFLPCPVRRLQRNNKDCDLASP
Sbjct: 181 PLILGLPAEQGPNLPTRRGVQKSVSAMAARPGPPDSTHIFLPCPVRRLQRNNKDCDLASP 240

Query: 241 PREGAFAGASPVLRLRDVGTERESGAGCLRSAPPRAGDARQQTQRCQSPSGGCEKGSRSV 300
           PREGAFAGASPVLRLRDVGTERESGAGCLRSAPPRAGDARQQTQRCQSPSGGCEKGSRSV
Sbjct: 241 PREGAFAGASPVLRLRDVGTERESGAGCLRSAPPRAGDARQQTQRCQSPSGGCEKGSRSV 300

Query: 301 SGSRRSEPRPPAGLGDARAASPADTVSDDVSRRHRGCFAGRARAPTGPRRRFANLGGGDR 360
           SGSRRSEPRPPAGLGDARAASPADTVSDDVSRRHRGCFAGRARAPTGPRRRFANLGGGDR
Sbjct: 301 SGSRRSEPRPPAGLGDARAASPADTVSDDVSRRHRGCFAGRARAPTGPRRRFANLGGGDR 360

Query: 361 TRPLGLLKRGWLSSAA 376
           TRPLGLLKRGWLSSAA
Sbjct: 361 TRPLGLLKRGWLSSAA 376


>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
           sapiens]
          Length = 321

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 55/217 (25%), Positives = 78/217 (35%), Gaps = 40/217 (18%)

Query: 186 LPAEQGPNLPTRRGV---------QKSVSAMAARPGPPDSTHIF-LPCPVRRLQRNNKDC 235
           L    GP  P   G+           ++ A  A+P   D+  +  LP  ++ L      C
Sbjct: 6   LEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLA----GC 61

Query: 236 DLASPPREGAFAGASPVLRLRDVGT------------ERESGAGCLRSAPPR-AGDARQQ 282
           D  +  R+     A+ +L L   G             E+  G GCL   PP+     R  
Sbjct: 62  DPCASLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSG 121

Query: 283 TQRCQSPSGGCEKGSRSVSGSRRSEPRPPAGLGD----ARAASPADTVSDDVSRRHRGCF 338
            +RC S     +  SRS S   RS P+   G G      + A+ A   S     R RG  
Sbjct: 122 PRRCLS-----QDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGK 176

Query: 339 AGRARAPTGPRRRFANLGGG----DRTRPLGLLKRGW 371
             R R          + GGG     + R +G  +RGW
Sbjct: 177 KIRRRGQKAAAAGAKSCGGGGKKPQKARAVGARRRGW 213


>gi|239752632 PREDICTED: hypothetical protein XP_002347697 [Homo
           sapiens]
          Length = 231

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 55/217 (25%), Positives = 78/217 (35%), Gaps = 40/217 (18%)

Query: 186 LPAEQGPNLPTRRGV---------QKSVSAMAARPGPPDSTHIF-LPCPVRRLQRNNKDC 235
           L    GP  P   G+           ++ A  A+P   D+  +  LP  ++ L      C
Sbjct: 6   LEPSPGPQSPYLHGLYLLLGEVLGHSALGAQHAQPANGDADELLELPALLQHLA----GC 61

Query: 236 DLASPPREGAFAGASPVLRLRDVGT------------ERESGAGCLRSAPPR-AGDARQQ 282
           D  +  R+     A+ +L L   G             E+  G GCL   PP+     R  
Sbjct: 62  DPCASLRDSCVTPATALLLLSHRGQVQRRSMQAAAAQEQSLGRGCLGKEPPKWESSTRSG 121

Query: 283 TQRCQSPSGGCEKGSRSVSGSRRSEPRPPAGLGD----ARAASPADTVSDDVSRRHRGCF 338
            +RC S     +  SRS S   RS P+   G G      + A+ A   S     R RG  
Sbjct: 122 PRRCLS-----QDASRSGSRVCRSRPQTRGGGGKKPRRGQKAATAGAKSRGGGVRSRGGK 176

Query: 339 AGRARAPTGPRRRFANLGGG----DRTRPLGLLKRGW 371
             R R          + GGG     + R +G  +RGW
Sbjct: 177 KIRRRGQKAAAAGAKSCGGGGKKPQKARAVGARRRGW 213


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 37.0 bits (84), Expect = 0.029
 Identities = 44/169 (26%), Positives = 63/169 (37%), Gaps = 33/169 (19%)

Query: 88  ESAALEYSLELPLSHPAVLPTTYSPPKAERKRLAGVEGSTSSASWLRTRNSAWPLNAPSI 147
           ++AA      LP S P   P   +PP            S S+   L+T      L +P  
Sbjct: 321 DNAATPLPATLPPSPPLATPLPLAPP------------SPSAPPSLQT------LPSPPA 362

Query: 148 TDPNKPSPNSLCNAANPSSVGPPHLHLTTPKSCPLILGLPAEQGPNLPTRRGVQKSVSAM 207
           T P++  P+       P    PP L    P   P  L  P+ Q P  P      ++ +++
Sbjct: 363 TPPSQAPPSM----TTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSL 418

Query: 208 AARPGPP--DSTHIFLPCPVRRLQRNNKDCDLASPPREGAFAGASPVLR 254
               G P   +TH FL    R+ Q       L SP R  +    SP L+
Sbjct: 419 ----GSPTLQATHSFLTMSPRQTQ-----ASLTSPSRPASTPPDSPPLQ 458



 Score = 29.6 bits (65), Expect = 4.6
 Identities = 40/141 (28%), Positives = 52/141 (36%), Gaps = 28/141 (19%)

Query: 88  ESAALEYSLELPLSHPAVLPTTYSPPKAERKRLAGVEGSTSSASWLRTRNSAWPLNAPSI 147
           +S+    SL+ P   PA L T   PP      LA     T+SA          PL  P +
Sbjct: 515 QSSLAPPSLQTP---PASLTT---PPLENLPSLAPPPLQTASA----------PLTTPHL 558

Query: 148 TDPNKPSPNSLCNAANPSSVGPPHLH---LTTPKSCPLILGLPAEQG---PNL------P 195
             P  P+P  L    +P +  PP       T P   P  L  P  QG   P L      P
Sbjct: 559 ETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPP 618

Query: 196 TRRGVQKSVSAMAARPGPPDS 216
            +     ++  + A P PP S
Sbjct: 619 PQAPPXLALPPLQAPPSPPAS 639


>gi|55749804 aminopeptidase Fxna [Homo sapiens]
          Length = 904

 Score = 37.0 bits (84), Expect = 0.029
 Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 3/71 (4%)

Query: 250 SPVLRLRDVGTERESGAGCLRSAPPRAGDARQQTQRCQSPSGGCEKGSRSVSGSRRSEPR 309
           S  +R   VG ER  GA    +APP   +AR Q       SGG     RS  GS  +   
Sbjct: 7   SAAVRRHRVGVERREGAA---AAPPPEREARAQEPLVDGCSGGGRTRKRSPGGSGGASRG 63

Query: 310 PPAGLGDARAA 320
              GL + RAA
Sbjct: 64  AGTGLSEVRAA 74


>gi|239747614 PREDICTED: similar to Putative uncharacterized protein
           FLJ44672 [Homo sapiens]
          Length = 259

 Score = 36.6 bits (83), Expect = 0.038
 Identities = 47/187 (25%), Positives = 70/187 (37%), Gaps = 18/187 (9%)

Query: 142 LNAPSITDPNKPSPNSLCNAANPSSVGPPHLHLTTP-------KSCPLILGLPAEQGPNL 194
           L  P + +   P P S    A+P S      HL  P        S P +  L A  GPN 
Sbjct: 70  LVGPQLPEAKFPRPRSGLTVASPGSAPALRWHLQAPNGLRSVGSSRPSLGLLAASAGPNR 129

Query: 195 PTRRGVQKSVSAMAARPGPPDSTHIFLPCPVRRLQRNNKDCDLASPPREGAFAGASPVLR 254
           P     + S+   AA  GP          P   L+   ++  +  P      + ASP  +
Sbjct: 130 PEVGLSRPSLGLPAASAGPSH--------PQIGLELGLEEQQVGLPGPNSVLSAASPGAK 181

Query: 255 LRDVGTERESGAGCLRSAPPRAGDARQQTQRCQSPSGGCEK--GSRSVSGSRRSEPRPPA 312
           L  V   R S + CL  A   A  +   +     P+    +   +++++ S   + RPPA
Sbjct: 182 LPRVSLSRPS-SSCLPVASFXAQPSSWLSAAFPGPAFDFWRPLQAQNLTSSGPLQARPPA 240

Query: 313 GLGDARA 319
               ARA
Sbjct: 241 SRRPARA 247


>gi|116812575 high glucose-regulated protein 8 [Homo sapiens]
          Length = 579

 Score = 36.6 bits (83), Expect = 0.038
 Identities = 47/178 (26%), Positives = 65/178 (36%), Gaps = 41/178 (23%)

Query: 160 NAANPSSVGPPHLHLTTPKSCPLILGLPAEQGPNLPTRRGVQKSVSAMAARPGPP----- 214
           N+  P+++ PP      P S   I   PA+Q P L T+ G+     A ++ P PP     
Sbjct: 224 NSLPPATIAPPK-----PASWADIASKPAKQQPKLKTKNGI-----AGSSLPPPPIKHNM 273

Query: 215 -----DSTHIFLPCPVRRLQRNNKDCDLASPPREGAFAGASPVLRLRDVGTERESGAGCL 269
                D+       P + L +N       SP   G  A  SP +    VG + +     L
Sbjct: 274 DIGTWDNKGPVAKAPSQALVQNIGQPTQGSPQPVGQQANNSPPVAQASVGQQTQP----L 329

Query: 270 RSAPPRAGDARQQTQRCQSP---------SGGCEKG--------SRSVSGSRRSEPRP 310
              PP+      Q Q  Q           SG    G        S++ SGS  SEP P
Sbjct: 330 PPPPPQPAQLSVQQQAAQPTRWVAPRNRGSGFGHNGVDGNGVGQSQAGSGSTPSEPHP 387


>gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 402

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 62/212 (29%), Positives = 82/212 (38%), Gaps = 26/212 (12%)

Query: 103 PAVLPTTYSPPKAE-RKRLAGVEGSTSSASWLRTRNSAWPLNAPSITDPN--KPSPNSLC 159
           P  L +   P KA  R RL   +G +S AS  R      P  A ++      +P   SL 
Sbjct: 116 PQALASLLGPGKAGCRTRL---QGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLA 172

Query: 160 NAANPSSV-GPPHLHLTTPKSCPLILGLPAEQGPNLPTRRGVQKSVSAMA-ARPGPPDST 217
            A+   +V G P   L      PL L   A  GP+ PT RG  + ++    +R  PP   
Sbjct: 173 QASRSGTVPGLPPASLQ-----PLRLPYLAPPGPHDPTSRGPGRLLTCEPPSRKLPPPLP 227

Query: 218 HIFLPCPVRRLQRNNKDCDLASPPR-EGAFAGASPVLRLRDVGTERESGAGCLRSAPPRA 276
               PC  R +        LA PP         +P L LR    ER S     RSA    
Sbjct: 228 ----PCRSRWV--------LAPPPTVRPRLRVLTPPLALRRALPERGSRTPSTRSAVLSG 275

Query: 277 GDARQQTQRCQSPSGGCEKGSRSVSGSRRSEP 308
             A   T+   +PS     GS  +S  R++ P
Sbjct: 276 RVAGLGTELTLTPSSRRAHGSHPLSSERQAAP 307


>gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo
           sapiens]
          Length = 755

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 43/124 (34%), Positives = 51/124 (41%), Gaps = 27/124 (21%)

Query: 250 SPVLRLRDVGTERESGAGC-LRSAPPRAGDARQQTQRCQSPSGGCE-------KGSRSVS 301
           +P+   RD G E   G GC LR+A P AG      Q  Q P GG +       +G RS+S
Sbjct: 104 APLTVGRDSGLEAGVGVGCGLRTAQP-AGFELLAWQHPQKPPGGPQRPSPGGLRGPRSLS 162

Query: 302 GSRRSEPRPP------AGLGDARAASPADTVSDDVSRRHRGCFAG-RARAPTGPRRRFAN 354
           GS  S  R P      +GL  A    PA          H  C AG   RA  GP +R   
Sbjct: 163 GS--SPWRGPQGSLCKSGLCCAHPVRPAG---------HLACGAGIWTRAQAGPHKRAVG 211

Query: 355 LGGG 358
              G
Sbjct: 212 AAAG 215


>gi|91208420 bassoon protein [Homo sapiens]
          Length = 3926

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 35/98 (35%), Positives = 41/98 (41%), Gaps = 14/98 (14%)

Query: 265 GAGCLRSAP------PRAGDARQQT-QRCQSPSGGCEKGSRSVSGSRRSEPRPPAGLGDA 317
           GAG   SAP      P AG AR         P  G   G    S SRR +P+ P  LG+ 
Sbjct: 32  GAGKPPSAPAGGGQLPAAGAARSTAVPPVPGPGPGPGPGPGPGSTSRRLDPKEP--LGNQ 89

Query: 318 RAASPADTVSDDVSRRHRGCFAGRARAPT-----GPRR 350
           RAASP    +   +  H      RA+ P      GPRR
Sbjct: 90  RAASPTPKQASATTPGHESPRETRAQGPAGQEADGPRR 127


>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
            containing 2 [Homo sapiens]
          Length = 1455

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 51/176 (28%), Positives = 66/176 (37%), Gaps = 28/176 (15%)

Query: 187  PAEQGPNLPTRRGVQKS---VSAMAARPGPP-DSTHIFLPCPVRRLQRNNKDCDLASPPR 242
            PA   P LP   GV           + P PP D +H   P P   ++R +        P+
Sbjct: 1244 PAAAAPGLP-EVGVSLDDGLAPFSPSHPAPPSDPSHQISPGPTWDIKREHD----VRKPK 1298

Query: 243  EGAFAGASPVLRLRDVGTERESGAGCLRSAPPRAGDARQQTQRCQSPSGGCEKGSRSVSG 302
            E +  G     + + +G +RE  A   R+A PR  +A         P G      R  +G
Sbjct: 1299 ELSACGQ----KKQRLGEQRERSASPQRAARPRLEEA---------PGG----QGRPEAG 1341

Query: 303  SRRSEPRPPAGLGDARAASPADTVSDDVSRRHRGCFAGRARAPTGPRRRFANLGGG 358
               SE R P GL  A AA  A     +  R   G    R   P G    FA  GGG
Sbjct: 1342 RPASEARAP-GLAAADAADAARAGGKEAPRAAAGSELCRREGP-GAAPAFAGPGGG 1395


>gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo
           sapiens]
          Length = 755

 Score = 35.8 bits (81), Expect = 0.065
 Identities = 43/124 (34%), Positives = 51/124 (41%), Gaps = 27/124 (21%)

Query: 250 SPVLRLRDVGTERESGAGC-LRSAPPRAGDARQQTQRCQSPSGGCE-------KGSRSVS 301
           +P+   RD G E   G GC LR+A P AG      Q  Q P GG +       +G RS+S
Sbjct: 104 APLTVGRDSGLEAGVGVGCGLRTAQP-AGFELLAWQHPQKPPGGPQRPSPGGLRGPRSLS 162

Query: 302 GSRRSEPRPP------AGLGDARAASPADTVSDDVSRRHRGCFAG-RARAPTGPRRRFAN 354
           GS  S  R P      +GL  A    PA          H  C AG   RA  GP +R   
Sbjct: 163 GS--SPWRGPQGSLCKSGLCCAHPVRPAG---------HVACGAGIWTRAQAGPHKRAVG 211

Query: 355 LGGG 358
              G
Sbjct: 212 AAAG 215


>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 274

 Score = 35.8 bits (81), Expect = 0.065
 Identities = 42/158 (26%), Positives = 60/158 (37%), Gaps = 13/158 (8%)

Query: 211 PGPPD-----STHIFLPCPVRRLQRNNKDCDLASPPRE----GAFAGASPVLRLRDVGTE 261
           PGPP      S+ + LP    R    + +     PP      GA   A P  RL      
Sbjct: 42  PGPPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPPAAPHVLGARVAAGPTHRL-SASHS 100

Query: 262 RESGAGCLRSAPPRAGDARQQTQRCQSPSGGCEKGSRSVSGSRRSEPRPPAGLGDARAAS 321
           R S  G + + P R G  R+   R +S +    +   + + S +S P PP     +RA S
Sbjct: 101 RVSSRGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPPPPP---PSRARS 157

Query: 322 PADTVSDDVSRRHRGCFAGRARAPTGPRRRFANLGGGD 359
            +  +S   SR      + R R     R      GGG+
Sbjct: 158 RSLRLSAPGSRHDAEKASERNRLRRKKRLVLGRGGGGE 195


>gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo
           sapiens]
          Length = 755

 Score = 35.8 bits (81), Expect = 0.065
 Identities = 43/124 (34%), Positives = 51/124 (41%), Gaps = 27/124 (21%)

Query: 250 SPVLRLRDVGTERESGAGC-LRSAPPRAGDARQQTQRCQSPSGGCE-------KGSRSVS 301
           +P+   RD G E   G GC LR+A P AG      Q  Q P GG +       +G RS+S
Sbjct: 104 APLTVGRDSGLEAGVGVGCGLRTAQP-AGFELLAWQHPQKPPGGPQRPSPGGLRGPRSLS 162

Query: 302 GSRRSEPRPP------AGLGDARAASPADTVSDDVSRRHRGCFAG-RARAPTGPRRRFAN 354
           GS  S  R P      +GL  A    PA          H  C AG   RA  GP +R   
Sbjct: 163 GS--SPWRGPQGSLCKSGLCCAHPVRPAG---------HVACGAGIWTRAQAGPHKRAVG 211

Query: 355 LGGG 358
              G
Sbjct: 212 AAAG 215


>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
           sapiens]
          Length = 274

 Score = 35.8 bits (81), Expect = 0.065
 Identities = 42/158 (26%), Positives = 60/158 (37%), Gaps = 13/158 (8%)

Query: 211 PGPPD-----STHIFLPCPVRRLQRNNKDCDLASPPRE----GAFAGASPVLRLRDVGTE 261
           PGPP      S+ + LP    R    + +     PP      GA   A P  RL      
Sbjct: 42  PGPPSRSRSPSSRLKLPADPPRALPGSPEPPPPPPPAAPHVLGARVAAGPTHRL-SASHS 100

Query: 262 RESGAGCLRSAPPRAGDARQQTQRCQSPSGGCEKGSRSVSGSRRSEPRPPAGLGDARAAS 321
           R S  G + + P R G  R+   R +S +    +   + + S +S P PP     +RA S
Sbjct: 101 RVSSRGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPPPPP---PSRARS 157

Query: 322 PADTVSDDVSRRHRGCFAGRARAPTGPRRRFANLGGGD 359
            +  +S   SR      + R R     R      GGG+
Sbjct: 158 RSLRLSAPGSRHDAEKASERNRLRRKKRLVLGRGGGGE 195


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
           sapiens]
          Length = 5537

 Score = 35.8 bits (81), Expect = 0.065
 Identities = 54/201 (26%), Positives = 67/201 (33%), Gaps = 22/201 (10%)

Query: 77  LEAQVGSHQLWESAALEYSLELPLSHPAVLPTTYSPPKAERKRLAGVEGSTS---SASWL 133
           LE Q+ +    E   L    E PLS P     T  PP+A R      E   S    A  L
Sbjct: 426 LEPQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPPPEASRLSPPPEELPASPLPEALHL 485

Query: 134 RTRNSAWPLNAPSITDPNKPSPNSLC------NAANPSSVGPPHLHLTTPKSCP---LIL 184
                  PL+ P    P  P P S        +  +P    PP   L TP S P     L
Sbjct: 486 SRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPL 545

Query: 185 GLPAEQGPNLPTRRGVQKSVSAMAARPGPPDSTHIFLPCP----------VRRLQRNNKD 234
             P E+ P  P    +  S    A+R  PP       P P            RL    ++
Sbjct: 546 SPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEE 605

Query: 235 CDLASPPREGAFAGASPVLRL 255
             L+ PP E   +      RL
Sbjct: 606 SPLSPPPEESPLSPPPEASRL 626



 Score = 32.3 bits (72), Expect = 0.71
 Identities = 44/172 (25%), Positives = 62/172 (36%), Gaps = 22/172 (12%)

Query: 97  ELPLSHPAVLPTTYSPPKA------ERKRLAGVEGSTSSASW---LRTRNSAWPLNAPSI 147
           E PLS P        PP++      E   L+  E S  S +    L     A PL+ P  
Sbjct: 491 ESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEASPLSPPFE 550

Query: 148 TDPNKPSPNSLCNAANP--SSVGPPHLHLTTPKSCPLILGLPAEQGPNLPTRRGVQKSVS 205
             P  P P  L  +  P  S + PP      P+  P+    P E+ P  P      +   
Sbjct: 551 ESPLSPPPEELPTSPPPEASRLSPP------PEESPM--SPPPEESPMSPPPEA-SRLFP 601

Query: 206 AMAARP--GPPDSTHIFLPCPVRRLQRNNKDCDLASPPREGAFAGASPVLRL 255
                P   PP+ + +  P    RL    +D  ++ PP E   +    V RL
Sbjct: 602 PFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRL 653



 Score = 29.3 bits (64), Expect = 6.0
 Identities = 41/159 (25%), Positives = 53/159 (33%), Gaps = 20/159 (12%)

Query: 97  ELPLSHPAVLPTTYSPPKAERKRLAGVEGSTSS----ASWLRTRNSAWPLNAPSITDPNK 152
           ELP S P    +  SPP  E       E S  S    AS L       PL+ P    P  
Sbjct: 560 ELPTSPPPEA-SRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLS 618

Query: 153 PSPNSLCNAANPSSVGPPHLHLTTPKSCPLILGLPAEQGPNLPTRRGVQKSVSAMAARPG 212
           P P +       S + PP      P+  P+    P E+ P  P     + S   + +R  
Sbjct: 619 PPPEA-------SRLSPP------PEDSPM--SPPPEESPMSPPPEVSRLSPLPVVSRLS 663

Query: 213 PPDSTHIFLPCPVRRLQRNNKDCDLASPPREGAFAGASP 251
           PP       P P         +    SPP E +     P
Sbjct: 664 PPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPP 702


>gi|38158015 mastermind-like 3 [Homo sapiens]
          Length = 1133

 Score = 35.8 bits (81), Expect = 0.065
 Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 15/157 (9%)

Query: 141 PLNAPSITDPNKPSPNSLCNA------ANPSSVGPPHLHLTTPKSCPLILGLPAEQGP-N 193
           PL+  S +  + PS +   +       A PSS GPP   ++T  S P +   PA   P +
Sbjct: 349 PLSQESASVKSDPSHSPFAHVSMGSPQARPSSSGPPFSTVSTATSLPSVASTPAAPNPAS 408

Query: 194 LPTRRGVQK-SVSAMAARPG--PPDSTHIFLPCPVRRLQRNNKDCDLASPPREGAFAGAS 250
            P    VQ       A  PG  PP   + +L  P       +    +A P  +      S
Sbjct: 409 SPANCAVQSPQTPNQAHTPGQAPPRPGNGYLLNPAAVTVAGSASGPVAVPSSD-----MS 463

Query: 251 PVLRLRDVGTERESGAGCLRSAPPRAGDARQQTQRCQ 287
           P  +L+ +  +++  A  ++    +    +QQ Q+ Q
Sbjct: 464 PAEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQ 500


>gi|155029552 hypothetical protein LOC388115 [Homo sapiens]
          Length = 534

 Score = 35.4 bits (80), Expect = 0.084
 Identities = 53/219 (24%), Positives = 84/219 (38%), Gaps = 49/219 (22%)

Query: 114 KAERKRLAGVEGSTSS-------------ASWLRTRNSAWPLNAPSITDPNKPSPNSLCN 160
           K +++ L G EGS S+             +   + R  + P  +P++  P  P   S+ +
Sbjct: 344 KEDKEELEGQEGSQSTRETPSEEEQAQKQSGMEQGRLGSAPAASPALASPEGPKGESVAS 403

Query: 161 AANPSSVGPPHLHLTTPKSCPLILGLPAEQGPNLPTRRGVQKSVSAMAARPGPPDSTHIF 220
            A+     P       P   PL L L    G  +P   G ++S   +  RPG  +S   +
Sbjct: 404 TASSVPCSPQE-----PDLAPLDLSLG---GAGIP---GPRESGCVLGLRPGAQESPVSW 452

Query: 221 LPCPVRR-LQRNNKDCDL----ASPPREGAFAGASPVLRLRDVGTERESGAGCLRSAPPR 275
                ++ L  +N   +L       P+ GA         L + G +R   +G  +   PR
Sbjct: 453 PEGSKQQPLGWSNHQAELEVQTCPEPQRGA--------GLPEPGEDRSGKSGAQQGLAPR 504

Query: 276 AGDARQQTQRCQSPSGGCEKGSRSVSGSRRSEPRP-PAG 313
           +   R  +QR           SR  +G RR   RP PAG
Sbjct: 505 SRPTRGGSQR-----------SRGTAGVRRRTGRPGPAG 532


>gi|239741968 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 263

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 51/188 (27%), Positives = 67/188 (35%), Gaps = 42/188 (22%)

Query: 171 HLHLTTPKSCPLILGLPAEQGPNLPTRRGVQKSVSAMAARPGPPDSTHIFLPCPVRRLQR 230
           HL +  P   PL+      +  ++  R+G +K+V A+  R G P +        +RR+ R
Sbjct: 59  HLQIPHPDRSPLLYQPTPPR--SVCVRKGARKTVEALRPREGSPAAPIGDEEWVLRRIWR 116

Query: 231 NNKDCDLASPPREGAFAGASPVLRLRDVGTERESGAGCLRSAPPRAGDARQQTQRCQSPS 290
                      R GA AGASP       G     G    R A  RA        RC    
Sbjct: 117 -----------RTGA-AGASP------AGARSHPGRASRRGASDRA--------RCARGL 150

Query: 291 GGCEKGSRS-------VSGSRRSEPRPPAGLGDARAASPADTVSDDVSRRHRGCFAGRAR 343
           GG    + S        SG+ R+ P  PA       A  A   + D  R         AR
Sbjct: 151 GGPRVAAASELVRRGLASGAARARPASPAPARLLPLAVGASAAAGDTRRT-------EAR 203

Query: 344 APTGPRRR 351
           A   P RR
Sbjct: 204 AEPSPSRR 211


>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
           [Homo sapiens]
          Length = 1125

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 14/127 (11%)

Query: 99  PLSHPAVLPTTYSPPKAERKRLAGVEGSTSSASWLRTRNSAWPLNAP-SITDPNKPSPNS 157
           P++ P  +P  ++PP +    ++G  G+  S   ++   SA P  AP ++  P    P S
Sbjct: 746 PITPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVS 805

Query: 158 LCNAANPSSVGP-PHLHLTTPKSCPLILG-----LPAEQGPNLPTRRGVQKSVSAMAARP 211
           L        V P P + L  P +   +LG     +P ++ P +P      +    M  RP
Sbjct: 806 LLGT---QGVAPGPVIGLQAPSTG--LLGARPGLIPLQRPPGMPPPH--LQRFPLMPPRP 858

Query: 212 GPPDSTH 218
            PP   H
Sbjct: 859 MPPHMMH 865


>gi|149408146 TOX high mobility group box family member 2 isoform b
           [Homo sapiens]
          Length = 488

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 43/154 (27%), Positives = 54/154 (35%), Gaps = 26/154 (16%)

Query: 86  LWESAALEYSLELP-----LSHPAVLPTTYSPPKAERKRLAGV------------EGSTS 128
           +W+S   E     P      S  A  P    PPK     + G+                S
Sbjct: 292 MWDSLGEEQKQSSPDQGETKSTQANPPAKMLPPKQPMYAMPGLASFLTPSDLQAFRSGAS 351

Query: 129 SASWLRTRNSAWPLNAPSITDPNKPSPNSLCNAANPSSVGPPHLH---LTTPKSCPLILG 185
            AS  RT  S   L   S + P  PS   L    +     PPH     L+ P S      
Sbjct: 352 PASLARTLGSKSLLPGLSASPPPPPS-FPLSPTLHQQLSLPPHAQGALLSPPVSMS---- 406

Query: 186 LPAEQGPNLPTRRGVQKSVSAMAARPGPPDSTHI 219
            PA Q P LPT   +Q  ++   + PGP D  HI
Sbjct: 407 -PAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHI 439


>gi|40805823 collagen, type XXII, alpha 1 [Homo sapiens]
          Length = 1626

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 48/174 (27%), Positives = 58/174 (33%), Gaps = 18/174 (10%)

Query: 161  AANPSSVGPPHLHLTTPKSCPLILGLPAEQGPNLPTRRGVQKSVSAMAARPGPPDSTHIF 220
            A  P   GPP       K  P   GLP   GP  P  R            PG P  + + 
Sbjct: 1047 AGPPGPSGPPG-----DKGSPGSRGLPGFPGPQGPAGRDGAPGNPGERGPPGKPGLSSLL 1101

Query: 221  LPCPVRRLQRN-NKDCDLASPPREG--AFAGASPVL----RLRDVGTERESGAGCLRSAP 273
             P  +  L ++   DC    P   G   F G   V     R    G + E+G   L   P
Sbjct: 1102 SPGDINLLAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPP 1161

Query: 274  PRAGDARQQTQRCQSPSGGCEKGSRSVSG-----SRRSEPRPPAGLGDARAASP 322
              AG    Q +R      G +KG +   G          P PP   G A AA P
Sbjct: 1162 GIAGPQGSQGERGADGEVG-QKGDQGHPGVPGFMGPPGNPGPPGADGIAGAAGP 1214


>gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo
           sapiens]
          Length = 756

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 45/177 (25%), Positives = 63/177 (35%), Gaps = 33/177 (18%)

Query: 141 PLNAPSITDP--NKPSPNSLCNAANPSSVGPPHLHLTTPKSCPLILGLPAEQGPNLPTRR 198
           P+  P    P  ++P+P +  +     S GP           P + G P + GP+ P  R
Sbjct: 44  PVGGPDPQSPGLDEPAPGAAADGGARWSAGP----------APGLEGGPRDPGPSAPPPR 93

Query: 199 GVQKSVSAMAARPGPPDSTHIFLP--CPVRRLQRNNKDCDLASPPREGAF--AGASPVLR 254
              +   A    PGP   +   LP   P+       ++C  AS P    F   G+S   R
Sbjct: 94  SGPRGQLASPDAPGPGPRSEAPLPELDPLFSWTEEPEECGPASCPESAPFRLQGSSSSHR 153

Query: 255 LR---DVGT----------ERESGAGCLRSAPPRAGDARQQTQRCQSPSGGCEKGSR 298
            R   DV +            E G G    +PP+  D  Q       P G  E G R
Sbjct: 154 ARGEVDVFSPFPAPTAGELALEQGPG----SPPQPSDLSQTHPLPSEPVGSQEDGPR 206


>gi|239755298 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 44/149 (29%), Positives = 59/149 (39%), Gaps = 19/149 (12%)

Query: 113 PKAERKRLAGVEGSTSSASWLRTRNSAWPLNAPSITDPNKPSPNSLCNAANPSSVGPP-- 170
           P +  +R A   G+ +       R +  PL   +I  P +P+  +   +A  S   PP  
Sbjct: 132 PGSSGRRQAARRGAGTGLYPAAQRRAPAPLRPCAIPAPRRPAAAARLGSAARSPGAPPAG 191

Query: 171 -HLHLTTPKSCPLILGLPA--EQGPNLPTRR-----GVQKSVSAMAARP--GPPDSTHIF 220
             L    P+SCPL    PA    GPN P        G Q+S +A A RP   PP +    
Sbjct: 192 RSLAQPHPQSCPLARS-PAYRSTGPNDPASNFTEGTGRQRSAAA-APRPFVTPPTNRWTA 249

Query: 221 LPCPVRRLQRNNKDCDLASPPREGAFAGA 249
           L  P      N +    A PP  G   GA
Sbjct: 250 LSLP-----SNQRGRGQAWPPDVGGCRGA 273


>gi|239749793 PREDICTED: hypothetical protein XP_002347163 [Homo
           sapiens]
          Length = 250

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 44/149 (29%), Positives = 59/149 (39%), Gaps = 19/149 (12%)

Query: 113 PKAERKRLAGVEGSTSSASWLRTRNSAWPLNAPSITDPNKPSPNSLCNAANPSSVGPP-- 170
           P +  +R A   G+ +       R +  PL   +I  P +P+  +   +A  S   PP  
Sbjct: 85  PGSSGRRQAARRGAGTGLYPAAQRRAPAPLRPCAIPAPRRPAAAARLGSAARSPGAPPAG 144

Query: 171 -HLHLTTPKSCPLILGLPA--EQGPNLPTRR-----GVQKSVSAMAARP--GPPDSTHIF 220
             L    P+SCPL    PA    GPN P        G Q+S +A A RP   PP +    
Sbjct: 145 RSLAQPHPQSCPLARS-PAYRSTGPNDPASNFTEGTGRQRSAAA-APRPFVTPPTNRWTA 202

Query: 221 LPCPVRRLQRNNKDCDLASPPREGAFAGA 249
           L  P      N +    A PP  G   GA
Sbjct: 203 LSLP-----SNQRGRGQAWPPDVGGCRGA 226


>gi|239744053 PREDICTED: hypothetical protein XP_002343026 [Homo
           sapiens]
          Length = 250

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 44/149 (29%), Positives = 59/149 (39%), Gaps = 19/149 (12%)

Query: 113 PKAERKRLAGVEGSTSSASWLRTRNSAWPLNAPSITDPNKPSPNSLCNAANPSSVGPP-- 170
           P +  +R A   G+ +       R +  PL   +I  P +P+  +   +A  S   PP  
Sbjct: 85  PGSSGRRQAARRGAGTGLYPAAQRRAPAPLRPCAIPAPRRPAAAARLGSAARSPGAPPAG 144

Query: 171 -HLHLTTPKSCPLILGLPA--EQGPNLPTRR-----GVQKSVSAMAARP--GPPDSTHIF 220
             L    P+SCPL    PA    GPN P        G Q+S +A A RP   PP +    
Sbjct: 145 RSLAQPHPQSCPLARS-PAYRSTGPNDPASNFTEGTGRQRSAAA-APRPFVTPPTNRWTA 202

Query: 221 LPCPVRRLQRNNKDCDLASPPREGAFAGA 249
           L  P      N +    A PP  G   GA
Sbjct: 203 LSLP-----SNQRGRGQAWPPDVGGCRGA 226


>gi|149408144 TOX high mobility group box family member 2 isoform a
           [Homo sapiens]
          Length = 506

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 33/103 (32%), Positives = 40/103 (38%), Gaps = 9/103 (8%)

Query: 120 LAGVEGSTSSASWLRTRNSAWPLNAPSITDPNKPSPNSLCNAANPSSVGPPHLH---LTT 176
           L       S AS  RT  S   L   S + P  PS   L    +     PPH     L+ 
Sbjct: 361 LQAFRSGASPASLARTLGSKSLLPGLSASPPPPPS-FPLSPTLHQQLSLPPHAQGALLSP 419

Query: 177 PKSCPLILGLPAEQGPNLPTRRGVQKSVSAMAARPGPPDSTHI 219
           P S       PA Q P LPT   +Q  ++   + PGP D  HI
Sbjct: 420 PVSMS-----PAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHI 457


>gi|149408141 TOX high mobility group box family member 2 isoform c
           [Homo sapiens]
          Length = 464

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 33/103 (32%), Positives = 40/103 (38%), Gaps = 9/103 (8%)

Query: 120 LAGVEGSTSSASWLRTRNSAWPLNAPSITDPNKPSPNSLCNAANPSSVGPPHLH---LTT 176
           L       S AS  RT  S   L   S + P  PS   L    +     PPH     L+ 
Sbjct: 319 LQAFRSGASPASLARTLGSKSLLPGLSASPPPPPS-FPLSPTLHQQLSLPPHAQGALLSP 377

Query: 177 PKSCPLILGLPAEQGPNLPTRRGVQKSVSAMAARPGPPDSTHI 219
           P S       PA Q P LPT   +Q  ++   + PGP D  HI
Sbjct: 378 PVSMS-----PAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHI 415


>gi|14249636 TOX high mobility group box family member 2 isoform c
           [Homo sapiens]
          Length = 464

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 33/103 (32%), Positives = 40/103 (38%), Gaps = 9/103 (8%)

Query: 120 LAGVEGSTSSASWLRTRNSAWPLNAPSITDPNKPSPNSLCNAANPSSVGPPHLH---LTT 176
           L       S AS  RT  S   L   S + P  PS   L    +     PPH     L+ 
Sbjct: 319 LQAFRSGASPASLARTLGSKSLLPGLSASPPPPPS-FPLSPTLHQQLSLPPHAQGALLSP 377

Query: 177 PKSCPLILGLPAEQGPNLPTRRGVQKSVSAMAARPGPPDSTHI 219
           P S       PA Q P LPT   +Q  ++   + PGP D  HI
Sbjct: 378 PVSMS-----PAPQPPVLPTPMALQVQLAMSPSPPGPQDFPHI 415


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,996,789
Number of Sequences: 37866
Number of extensions: 1099351
Number of successful extensions: 4639
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 248
Number of HSP's that attempted gapping in prelim test: 4403
Number of HSP's gapped (non-prelim): 494
length of query: 376
length of database: 18,247,518
effective HSP length: 104
effective length of query: 272
effective length of database: 14,309,454
effective search space: 3892171488
effective search space used: 3892171488
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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