BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239756524 PREDICTED: hypothetical protein [Homo sapiens] (176 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239756524 PREDICTED: hypothetical protein [Homo sapiens] 377 e-105 gi|239751032 PREDICTED: hypothetical protein XP_002347676 [Homo ... 377 e-105 gi|239745462 PREDICTED: hypothetical protein XP_002343470 [Homo ... 377 e-105 gi|169212132 PREDICTED: CMT1A duplicated region transcript 15-li... 33 0.13 gi|89041269 PREDICTED: CMT1A duplicated region transcript 15-lik... 33 0.13 gi|156616290 collagen type VI alpha 6 [Homo sapiens] 32 0.22 gi|169211692 PREDICTED: CMT1A duplicated region transcript 15-li... 32 0.22 gi|89041220 PREDICTED: CMT1A duplicated region transcript 15-lik... 32 0.22 gi|239745981 PREDICTED: hypothetical protein XP_002343632 [Homo ... 32 0.28 gi|4758156 diacylglycerol kinase, iota [Homo sapiens] 31 0.49 gi|169208912 PREDICTED: hypothetical protein [Homo sapiens] 30 0.83 gi|169208667 PREDICTED: hypothetical protein [Homo sapiens] 30 0.83 gi|169208084 PREDICTED: hypothetical protein [Homo sapiens] 30 0.83 gi|4557743 Mediterranean fever protein [Homo sapiens] 30 1.1 gi|239753264 PREDICTED: hypothetical protein [Homo sapiens] 30 1.4 gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo ... 30 1.4 gi|239747823 PREDICTED: hypothetical protein XP_002348330 [Homo ... 30 1.4 gi|239745970 PREDICTED: hypothetical protein XP_002343628 [Homo ... 30 1.4 gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo ... 30 1.4 gi|239741693 PREDICTED: hypothetical protein XP_002342282 [Homo ... 30 1.4 gi|134031945 SCO-spondin [Homo sapiens] 30 1.4 gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] 29 1.8 gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ... 29 1.8 gi|223005897 GPN-loop GTPase 1 isoform a [Homo sapiens] 29 1.8 gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 29 1.8 gi|38524591 intramembrane protease 5 [Homo sapiens] 29 2.4 gi|239747556 PREDICTED: hypothetical protein XP_002347648 [Homo ... 28 3.1 gi|55741868 zinc finger protein 319 [Homo sapiens] 28 3.1 gi|4507595 tumor necrosis factor ligand superfamily, member 11 i... 28 4.1 gi|55770876 notch4 preproprotein [Homo sapiens] 28 4.1 >gi|239756524 PREDICTED: hypothetical protein [Homo sapiens] Length = 176 Score = 377 bits (968), Expect = e-105 Identities = 176/176 (100%), Positives = 176/176 (100%) Query: 1 MHIDAFWASLGWGCKAHFQLAGKWLKGEKGWGPGKGAPHCLPPRAQGQRQKAATSVSTAV 60 MHIDAFWASLGWGCKAHFQLAGKWLKGEKGWGPGKGAPHCLPPRAQGQRQKAATSVSTAV Sbjct: 1 MHIDAFWASLGWGCKAHFQLAGKWLKGEKGWGPGKGAPHCLPPRAQGQRQKAATSVSTAV 60 Query: 61 IRPGGTCGRECREGLLKGEGRWGIVLSVPQHLHPEGTGVSSSGPLGSGAASLLATHPPFL 120 IRPGGTCGRECREGLLKGEGRWGIVLSVPQHLHPEGTGVSSSGPLGSGAASLLATHPPFL Sbjct: 61 IRPGGTCGRECREGLLKGEGRWGIVLSVPQHLHPEGTGVSSSGPLGSGAASLLATHPPFL 120 Query: 121 ARQQHADDTLACQSGPSSCQGGWRVAQLTSFPLQDAHSLGQSLIRPDERREAPIPG 176 ARQQHADDTLACQSGPSSCQGGWRVAQLTSFPLQDAHSLGQSLIRPDERREAPIPG Sbjct: 121 ARQQHADDTLACQSGPSSCQGGWRVAQLTSFPLQDAHSLGQSLIRPDERREAPIPG 176 >gi|239751032 PREDICTED: hypothetical protein XP_002347676 [Homo sapiens] Length = 176 Score = 377 bits (968), Expect = e-105 Identities = 176/176 (100%), Positives = 176/176 (100%) Query: 1 MHIDAFWASLGWGCKAHFQLAGKWLKGEKGWGPGKGAPHCLPPRAQGQRQKAATSVSTAV 60 MHIDAFWASLGWGCKAHFQLAGKWLKGEKGWGPGKGAPHCLPPRAQGQRQKAATSVSTAV Sbjct: 1 MHIDAFWASLGWGCKAHFQLAGKWLKGEKGWGPGKGAPHCLPPRAQGQRQKAATSVSTAV 60 Query: 61 IRPGGTCGRECREGLLKGEGRWGIVLSVPQHLHPEGTGVSSSGPLGSGAASLLATHPPFL 120 IRPGGTCGRECREGLLKGEGRWGIVLSVPQHLHPEGTGVSSSGPLGSGAASLLATHPPFL Sbjct: 61 IRPGGTCGRECREGLLKGEGRWGIVLSVPQHLHPEGTGVSSSGPLGSGAASLLATHPPFL 120 Query: 121 ARQQHADDTLACQSGPSSCQGGWRVAQLTSFPLQDAHSLGQSLIRPDERREAPIPG 176 ARQQHADDTLACQSGPSSCQGGWRVAQLTSFPLQDAHSLGQSLIRPDERREAPIPG Sbjct: 121 ARQQHADDTLACQSGPSSCQGGWRVAQLTSFPLQDAHSLGQSLIRPDERREAPIPG 176 >gi|239745462 PREDICTED: hypothetical protein XP_002343470 [Homo sapiens] Length = 176 Score = 377 bits (968), Expect = e-105 Identities = 176/176 (100%), Positives = 176/176 (100%) Query: 1 MHIDAFWASLGWGCKAHFQLAGKWLKGEKGWGPGKGAPHCLPPRAQGQRQKAATSVSTAV 60 MHIDAFWASLGWGCKAHFQLAGKWLKGEKGWGPGKGAPHCLPPRAQGQRQKAATSVSTAV Sbjct: 1 MHIDAFWASLGWGCKAHFQLAGKWLKGEKGWGPGKGAPHCLPPRAQGQRQKAATSVSTAV 60 Query: 61 IRPGGTCGRECREGLLKGEGRWGIVLSVPQHLHPEGTGVSSSGPLGSGAASLLATHPPFL 120 IRPGGTCGRECREGLLKGEGRWGIVLSVPQHLHPEGTGVSSSGPLGSGAASLLATHPPFL Sbjct: 61 IRPGGTCGRECREGLLKGEGRWGIVLSVPQHLHPEGTGVSSSGPLGSGAASLLATHPPFL 120 Query: 121 ARQQHADDTLACQSGPSSCQGGWRVAQLTSFPLQDAHSLGQSLIRPDERREAPIPG 176 ARQQHADDTLACQSGPSSCQGGWRVAQLTSFPLQDAHSLGQSLIRPDERREAPIPG Sbjct: 121 ARQQHADDTLACQSGPSSCQGGWRVAQLTSFPLQDAHSLGQSLIRPDERREAPIPG 176 >gi|169212132 PREDICTED: CMT1A duplicated region transcript 15-like 2 [Homo sapiens] Length = 110 Score = 33.1 bits (74), Expect = 0.13 Identities = 27/94 (28%), Positives = 31/94 (32%), Gaps = 18/94 (19%) Query: 27 GEKGWGP----------GKGAPHCLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLL 76 G+ G GP G + HC P + S +V R TCG CR Sbjct: 25 GQPGAGPSWPGHTRDPIGAASAHCPCPGGDSGAHGGTDTCSWSVRRHSSTCGTGCRAKAS 84 Query: 77 KGEGRWGIVLSVPQHLHPEGTGVSSSGPLGSGAA 110 G P G G SS GP GAA Sbjct: 85 MGR--------APSRESAGGGGSSSQGPAQPGAA 110 >gi|89041269 PREDICTED: CMT1A duplicated region transcript 15-like 2 [Homo sapiens] Length = 110 Score = 33.1 bits (74), Expect = 0.13 Identities = 27/94 (28%), Positives = 31/94 (32%), Gaps = 18/94 (19%) Query: 27 GEKGWGP----------GKGAPHCLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLL 76 G+ G GP G + HC P + S +V R TCG CR Sbjct: 25 GQPGAGPSWPGHTRDPIGAASAHCPCPGGDSGAHGGTDTCSWSVRRHSSTCGTGCRAKAS 84 Query: 77 KGEGRWGIVLSVPQHLHPEGTGVSSSGPLGSGAA 110 G P G G SS GP GAA Sbjct: 85 MGR--------APSRESAGGGGSSSQGPAQPGAA 110 >gi|156616290 collagen type VI alpha 6 [Homo sapiens] Length = 2263 Score = 32.3 bits (72), Expect = 0.22 Identities = 32/88 (36%), Positives = 37/88 (42%), Gaps = 13/88 (14%) Query: 25 LKGEKGWGPGKGAPHCLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLLKGEGRWGI 84 LKGE+G +G P PP G R+K A P GT G +GL EG G Sbjct: 1526 LKGERGRQGRRGWPG--PPGTPGSRRKTAAHGRRGHTGPQGTAGIPGPDGL---EGSLG- 1579 Query: 85 VLSVPQ------HLHPEGTGVSSSGPLG 106 L PQ + E GV S GP G Sbjct: 1580 -LKGPQGPRGEAGVKGEKGGVGSKGPQG 1606 >gi|169211692 PREDICTED: CMT1A duplicated region transcript 15-like 1 [Homo sapiens] Length = 110 Score = 32.3 bits (72), Expect = 0.22 Identities = 26/94 (27%), Positives = 31/94 (32%), Gaps = 18/94 (19%) Query: 27 GEKGWGP----------GKGAPHCLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLL 76 G+ G GP G + HC P + S ++ R TCG CR Sbjct: 25 GQPGAGPSWPGHTIDPIGAASVHCPCPGGDSGAHGGTDTCSWSIRRHSSTCGTGCRAKAS 84 Query: 77 KGEGRWGIVLSVPQHLHPEGTGVSSSGPLGSGAA 110 G P G G SS GP GAA Sbjct: 85 MGR--------APSRESAGGGGSSSQGPAQPGAA 110 >gi|89041220 PREDICTED: CMT1A duplicated region transcript 15-like 1 [Homo sapiens] Length = 110 Score = 32.3 bits (72), Expect = 0.22 Identities = 26/94 (27%), Positives = 31/94 (32%), Gaps = 18/94 (19%) Query: 27 GEKGWGP----------GKGAPHCLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLL 76 G+ G GP G + HC P + S ++ R TCG CR Sbjct: 25 GQPGAGPSWPGHTIDPIGAASVHCPCPGGDSGAHGGTDTCSWSIRRHSSTCGTGCRAKAS 84 Query: 77 KGEGRWGIVLSVPQHLHPEGTGVSSSGPLGSGAA 110 G P G G SS GP GAA Sbjct: 85 MGR--------APSRESAGGGGSSSQGPAQPGAA 110 >gi|239745981 PREDICTED: hypothetical protein XP_002343632 [Homo sapiens] Length = 474 Score = 32.0 bits (71), Expect = 0.28 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Query: 40 CLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLLKGEGRWGIVLSVPQHLHPEGTGV 99 C+P +QG R V A R G CG C+ + + E R + SV + P+ Sbjct: 14 CVPGDSQGSRAGIRVRVLCAGRRSGRPCGHPCQSAVCRAELRAALRASVSECCVPD---E 70 Query: 100 SSSGPLG 106 + GP G Sbjct: 71 AQGGPAG 77 Score = 28.9 bits (63), Expect = 2.4 Identities = 16/51 (31%), Positives = 23/51 (45%) Query: 40 CLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLLKGEGRWGIVLSVPQ 90 C+P AQG R V A R G CG C+ + + + R + SV + Sbjct: 170 CVPGDAQGNRAGIRVRVLCAGRRSGRPCGHPCQSAVCRTKLRAALRASVSE 220 Score = 28.1 bits (61), Expect = 4.1 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Query: 40 CLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLLKGEGRWGIVLSVPQHLHPEGTGV 99 C+P +QG R SV A G CG C+ + + R + SV + P G Sbjct: 378 CVPGDSQGGRVGIRVSVLCAGRLSGQPCGHPCQSAVCRATVRAAVRASVSECCVP---GD 434 Query: 100 SSSGPLG 106 S G +G Sbjct: 435 SQGGRVG 441 Score = 27.3 bits (59), Expect = 7.0 Identities = 17/64 (26%), Positives = 26/64 (40%) Query: 40 CLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLLKGEGRWGIVLSVPQHLHPEGTGV 99 C+P AQG R V A G CG C+ + + R + S+ + P + Sbjct: 274 CVPGDAQGNRAGIRVRVLCAGRSSGRPCGHPCQSAVCRATLRAAVQASMSECCVPGDSQG 333 Query: 100 SSSG 103 S +G Sbjct: 334 SRAG 337 >gi|4758156 diacylglycerol kinase, iota [Homo sapiens] Length = 1065 Score = 31.2 bits (69), Expect = 0.49 Identities = 34/116 (29%), Positives = 43/116 (37%), Gaps = 21/116 (18%) Query: 34 GKGAPHCLP-PRAQGQRQKAATSVSTAVIRPGGTCGRECREGLLKGEGRWGIVLSVPQHL 92 G+G H LP P A+G + A + + A PG G C G G S + Sbjct: 5 GRGC-HLLPLPAARGPARAPAAAAAAAASPPGPCSGAACAPSAAAGAGAMNPSSSAGEEK 63 Query: 93 HPEGTGVSSSG---------------PLGSG---AASLLATHPPFLARQQHADDTL 130 G G SSSG P G+G AA A P A Q+ D+ L Sbjct: 64 GATG-GSSSSGSGAGSCCLGAEGGADPRGAGSAAAAGAAALDEPAAAGQKEKDEAL 118 >gi|169208912 PREDICTED: hypothetical protein [Homo sapiens] Length = 266 Score = 30.4 bits (67), Expect = 0.83 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 25 LKGEKGWGPGKGAPHCLPPRAQGQRQ-KAATSVSTAVIRPGGTCGR 69 L G + PG G HC R +G+R+ + A V + PGG C R Sbjct: 204 LGGARAVDPGTGWGHCACSRRRGERRSRRAAGVPGELGAPGGHCTR 249 >gi|169208667 PREDICTED: hypothetical protein [Homo sapiens] Length = 266 Score = 30.4 bits (67), Expect = 0.83 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 25 LKGEKGWGPGKGAPHCLPPRAQGQRQ-KAATSVSTAVIRPGGTCGR 69 L G + PG G HC R +G+R+ + A V + PGG C R Sbjct: 204 LGGARAVDPGTGWGHCACSRRRGERRSRRAAGVPGELGAPGGHCTR 249 >gi|169208084 PREDICTED: hypothetical protein [Homo sapiens] Length = 266 Score = 30.4 bits (67), Expect = 0.83 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 25 LKGEKGWGPGKGAPHCLPPRAQGQRQ-KAATSVSTAVIRPGGTCGR 69 L G + PG G HC R +G+R+ + A V + PGG C R Sbjct: 204 LGGARAVDPGTGWGHCACSRRRGERRSRRAAGVPGELGAPGGHCTR 249 >gi|4557743 Mediterranean fever protein [Homo sapiens] Length = 781 Score = 30.0 bits (66), Expect = 1.1 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 9/53 (16%) Query: 93 HPEGTGVSSSGPLGSGAASLLATHP---------PFLARQQHADDTLACQSGP 136 HPEG + P G GAASL + P P R++ A + L Q P Sbjct: 123 HPEGNEGNGPRPYGGGAASLRCSQPEAGRGLSRKPLSKRREKASEGLDAQGKP 175 >gi|239753264 PREDICTED: hypothetical protein [Homo sapiens] Length = 480 Score = 29.6 bits (65), Expect = 1.4 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Query: 12 WGCKAHFQLAGKWLKGEKGWGPGKGAPHC---LPPRAQGQRQKAATS 55 WG +A G W K W G+ AP C PR G R AA + Sbjct: 389 WGRRAGRASPGLWAKRAGSWELGRPAPPCPEASAPRPVGSRDVAAAA 435 >gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo sapiens] Length = 492 Score = 29.6 bits (65), Expect = 1.4 Identities = 14/25 (56%), Positives = 15/25 (60%) Query: 19 QLAGKWLKGEKGWGPGKGAPHCLPP 43 +L GK G KG G GAPH LPP Sbjct: 326 KLGGKRGVGRKGQGTRLGAPHSLPP 350 >gi|239747823 PREDICTED: hypothetical protein XP_002348330 [Homo sapiens] Length = 444 Score = 29.6 bits (65), Expect = 1.4 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Query: 12 WGCKAHFQLAGKWLKGEKGWGPGKGAPHC---LPPRAQGQRQKAATS 55 WG +A G W K W G+ AP C PR G R AA + Sbjct: 389 WGRRAGRASPGLWAKRAGSWELGRPAPPCPEASAPRPVGSRDVAAAA 435 >gi|239745970 PREDICTED: hypothetical protein XP_002343628 [Homo sapiens] Length = 138 Score = 29.6 bits (65), Expect = 1.4 Identities = 31/108 (28%), Positives = 41/108 (37%), Gaps = 21/108 (19%) Query: 32 GPGKGAPHCLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLLKGEGRWGIVLSVPQH 91 GP P PP A + + PG T R C +GEGR Sbjct: 22 GPISVGPQAAPPGATVTHPPTKPLICSGGFIPG-TRPRLCSR---EGEGR---------- 67 Query: 92 LHPEGTGVSSSGPLGSGAASLLATHPPFLARQQHADDTLACQSGPSSC 139 +G + GPL S +SLL P + R+ HAD + +GP C Sbjct: 68 ---KGEALGRQGPLRS--SSLLPPLPTWPGREGHADGNI--PAGPGLC 108 >gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo sapiens] Length = 492 Score = 29.6 bits (65), Expect = 1.4 Identities = 14/25 (56%), Positives = 15/25 (60%) Query: 19 QLAGKWLKGEKGWGPGKGAPHCLPP 43 +L GK G KG G GAPH LPP Sbjct: 326 KLGGKRGVGRKGQGTRLGAPHSLPP 350 >gi|239741693 PREDICTED: hypothetical protein XP_002342282 [Homo sapiens] Length = 480 Score = 29.6 bits (65), Expect = 1.4 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Query: 12 WGCKAHFQLAGKWLKGEKGWGPGKGAPHC---LPPRAQGQRQKAATS 55 WG +A G W K W G+ AP C PR G R AA + Sbjct: 389 WGRRAGRASPGLWAKRAGSWELGRPAPPCPEASAPRPVGSRDVAAAA 435 >gi|134031945 SCO-spondin [Homo sapiens] Length = 5147 Score = 29.6 bits (65), Expect = 1.4 Identities = 15/48 (31%), Positives = 19/48 (39%) Query: 33 PGKGAPHCLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLLKGEG 80 P +P CL P Q ++Q + P G C R C GL G Sbjct: 4285 PHHRSPPCLGPDTQTRQQPCPGLLEACSWGPWGPCSRSCGPGLASRSG 4332 >gi|239751791 PREDICTED: hypothetical protein [Homo sapiens] Length = 650 Score = 29.3 bits (64), Expect = 1.8 Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 11/93 (11%) Query: 26 KGEKGWGPGKGAPHCLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLLKGEGRWGIV 85 +G W G G P C + G R+ + AV G + R L G+V Sbjct: 87 RGPGPWPAGSGGPRCPSAPSDGVRRCPRLTAHAAVTWVGVSDWRGSFLKLSSSRSTRGLV 146 Query: 86 LSVPQHLHPEGTGVSSSGPLG----SGAASLLA 114 L EG GV + G G +GAAS L+ Sbjct: 147 LG-------EGVGVGAGGEGGGEGAAGAASSLS 172 >gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo sapiens] Length = 725 Score = 29.3 bits (64), Expect = 1.8 Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 11/93 (11%) Query: 26 KGEKGWGPGKGAPHCLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLLKGEGRWGIV 85 +G W G G P C + G R+ + AV G + R L G+V Sbjct: 87 RGPGPWPAGSGGPRCPSAPSDGVRRCPRLTAHAAVTWVGVSDWRGSFLKLSSSRSTRGLV 146 Query: 86 LSVPQHLHPEGTGVSSSGPLG----SGAASLLA 114 L EG GV + G G +GAAS L+ Sbjct: 147 LG-------EGVGVGAGGEGGGEGAAGAASSLS 172 >gi|223005897 GPN-loop GTPase 1 isoform a [Homo sapiens] Length = 388 Score = 29.3 bits (64), Expect = 1.8 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 40 CLPPRAQGQRQKAATSVSTAVIR-PGGTCGRECREGL-LKGEGRWGIVLSVPQHLHPEGT 97 CL R G R+K A S + A ++ GG C L + G G+ V + HLH +GT Sbjct: 3 CLYGRVGGARRKMAASAAAAELQASGGPRHPVCLLVLGMAGSGKTTFVQRLTGHLHAQGT 62 >gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] Length = 2217 Score = 29.3 bits (64), Expect = 1.8 Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 27/126 (21%) Query: 28 EKGWGPGKGAPHCLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLLKGEGRWGIVLS 87 ++G PG PH L G +++ S + A + ++ +L RW I+ Sbjct: 1268 DRGSDPGTSPPH-LSTCGLGTGEESRQSQANAPVY---------QQNVLHTGKRWFIICP 1317 Query: 88 VPQHLHPEGTGVSSSGPLGS---GAASLLATH---------PPFLARQQHADDTLACQSG 135 V +H PE S PL S A+ A + P FLA QQ L Q+G Sbjct: 1318 VAEHPAPEAPESSPPLPLSSLPPEASQDSAPYKDQLSSKEQPSFLASQQ-----LLSQAG 1372 Query: 136 PSSCQG 141 PS+ G Sbjct: 1373 PSNPPG 1378 >gi|38524591 intramembrane protease 5 [Homo sapiens] Length = 684 Score = 28.9 bits (63), Expect = 2.4 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%) Query: 31 WGPGKGAPHCLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLLKGEGRWGIVL 86 W PG+ +PH R+ QR T TA++ G C + L +G+G G+++ Sbjct: 69 WCPGEDSPHQAQLRSPSQRPLRQT---TAMVM-RGNCSFHTKGWLAQGQGAHGLLI 120 >gi|239747556 PREDICTED: hypothetical protein XP_002347648 [Homo sapiens] Length = 485 Score = 28.5 bits (62), Expect = 3.1 Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 14/66 (21%) Query: 39 HCLPPRAQGQRQKAATSVSTAVIRPGGTCGRECREGLLKGEGRWGIVLSVPQHLHPEGTG 98 H LPP +G P G +CRE + G W + H P G+ Sbjct: 166 HQLPPHIEGV--------------PEGRTVAKCRENWSQWTGHWSQWTGLWYHEPPTGSL 211 Query: 99 VSSSGP 104 +SSS P Sbjct: 212 ISSSSP 217 >gi|55741868 zinc finger protein 319 [Homo sapiens] Length = 582 Score = 28.5 bits (62), Expect = 3.1 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Query: 87 SVPQHLHPEGTGVSSSGPLGSGAASLLATHPPFLARQQHADDTLACQSGPSSCQGGWRVA 146 ++ +H P GT + PLG +L P L QHA A + GP G +A Sbjct: 30 ALAEHTLPPGT---AENPLGCAVYGILLQPDPGLQPPQHAPLQAAGEPGPKCGVCGHDLA 86 Query: 147 QLTS 150 L+S Sbjct: 87 HLSS 90 >gi|4507595 tumor necrosis factor ligand superfamily, member 11 isoform 1 [Homo sapiens] Length = 317 Score = 28.1 bits (61), Expect = 4.1 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%) Query: 23 KWLKGEKGWGPGKGAP-----HCLPPRAQGQRQKAATSVSTAVIRPG 64 K+L+G + G G GAP H PP A Q A+ S+ A++ G Sbjct: 10 KYLRGSEEMGGGPGAPHEGPLHAPPPPAPHQPPAASRSMFVALLGLG 56 >gi|55770876 notch4 preproprotein [Homo sapiens] Length = 2003 Score = 28.1 bits (61), Expect = 4.1 Identities = 28/92 (30%), Positives = 33/92 (35%), Gaps = 12/92 (13%) Query: 59 AVIRPGGTC-GRECREGLLKGEGRWGIV-------LSVPQHLHPEGTGVSSSGPLGSGAA 110 A PG TC R L GR G++ LS P H G S+ PL Sbjct: 362 ATCAPGSTCIDRVGSFSCLCPPGRTGLLCHLEDMCLSQPCH----GDAQCSTNPLTGSTL 417 Query: 111 SLLATHPPFLARQQHADDTLACQSGPSSCQGG 142 L Q D+ L Q GPS C+ G Sbjct: 418 CLCQPGYSGPTCHQDLDECLMAQQGPSPCEHG 449 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.317 0.136 0.452 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,884,248 Number of Sequences: 37866 Number of extensions: 469483 Number of successful extensions: 1420 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 50 Number of HSP's that attempted gapping in prelim test: 1385 Number of HSP's gapped (non-prelim): 80 length of query: 176 length of database: 18,247,518 effective HSP length: 95 effective length of query: 81 effective length of database: 14,650,248 effective search space: 1186670088 effective search space used: 1186670088 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.