Search of human proteins with 239756441

Search of human proteins with 239756441

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756441 PREDICTED: hypothetical protein LOC388199 [Homo
sapiens]
         (373 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756441 PREDICTED: hypothetical protein LOC388199 [Homo sap...   789   0.0  
gi|61966733 hypothetical protein LOC388199 [Homo sapiens]             773   0.0  
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    60   3e-09
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]     50   4e-06
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre...    49   7e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni...    48   1e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    48   2e-05
gi|115511036 alpha-kinase 3 [Homo sapiens]                             46   5e-05
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre...    46   5e-05
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]    46   6e-05
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]    45   8e-05
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]           45   1e-04
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            44   2e-04
gi|56549694 enabled homolog isoform a [Homo sapiens]                   44   2e-04
gi|39930375 enabled homolog isoform b [Homo sapiens]                   44   2e-04
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]            44   2e-04
gi|18780273 collagen, type XXI, alpha 1 precursor [Homo sapiens]       43   4e-04
gi|32307177 forkhead box G1 [Homo sapiens]                             43   4e-04
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H...    43   4e-04
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...    43   5e-04
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     43   5e-04
gi|4559408 colony stimulating factor 2 receptor, beta precursor ...    42   7e-04
gi|78499633 phospholipase C, eta 2 [Homo sapiens]                      42   7e-04
gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribo...    42   7e-04
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         42   7e-04
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]                42   7e-04
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]         42   7e-04
gi|148762978 similar to CG15216-PA [Homo sapiens]                      42   7e-04
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]      42   9e-04
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]       42   9e-04

>gi|239756441 PREDICTED: hypothetical protein LOC388199 [Homo
           sapiens]
          Length = 373

 Score =  789 bits (2037), Expect = 0.0
 Identities = 373/373 (100%), Positives = 373/373 (100%)

Query: 1   MARTDQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREI 60
           MARTDQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREI
Sbjct: 1   MARTDQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREI 60

Query: 61  SLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGT 120
           SLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGT
Sbjct: 61  SLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGT 120

Query: 121 PAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQA 180
           PAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQA
Sbjct: 121 PAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQA 180

Query: 181 PGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRH 240
           PGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRH
Sbjct: 181 PGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRH 240

Query: 241 GLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQ 300
           GLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQ
Sbjct: 241 GLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQ 300

Query: 301 LSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATGAARFGPRSCPLGSPA 360
           LSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATGAARFGPRSCPLGSPA
Sbjct: 301 LSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATGAARFGPRSCPLGSPA 360

Query: 361 VLAVTTGWSHRSV 373
           VLAVTTGWSHRSV
Sbjct: 361 VLAVTTGWSHRSV 373


>gi|61966733 hypothetical protein LOC388199 [Homo sapiens]
          Length = 402

 Score =  773 bits (1997), Expect = 0.0
 Identities = 373/402 (92%), Positives = 373/402 (92%), Gaps = 29/402 (7%)

Query: 1   MARTDQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREI 60
           MARTDQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREI
Sbjct: 1   MARTDQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREI 60

Query: 61  SLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGT 120
           SLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGT
Sbjct: 61  SLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGT 120

Query: 121 PAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQA 180
           PAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQA
Sbjct: 121 PAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQA 180

Query: 181 PGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRH 240
           PGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRH
Sbjct: 181 PGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRH 240

Query: 241 GLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQ 300
           GLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQ
Sbjct: 241 GLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQ 300

Query: 301 LSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPAT---------------- 344
           LSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPAT                
Sbjct: 301 LSRGWALLPPGDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATRRTAPPRRTASPEPPA 360

Query: 345 -------------GAARFGPRSCPLGSPAVLAVTTGWSHRSV 373
                        GAARFGPRSCPLGSPAVLAVTTGWSHRSV
Sbjct: 361 PGAPLPACPGRIPGAARFGPRSCPLGSPAVLAVTTGWSHRSV 402


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 78/307 (25%), Positives = 102/307 (33%), Gaps = 36/307 (11%)

Query: 7   KPPCRGGCWGQPGHPNTGGAAAHPTYHPMGH-RPRTCILLRGDQTTG-------GQAPSR 58
           +PP  G        P     AA P   P G  +P     L      G       G  P  
Sbjct: 127 RPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGP 186

Query: 59  EISLGPWAAGT----------HFLAISTTPWGRKTPACISELP--TSSGTA---QPLANA 103
               GP AA T          H  A          PA +  LP   + GT     P   A
Sbjct: 187 GKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGA 246

Query: 104 VCEVQTVPGPGL-RPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPP 162
                  P P    P   PA  AP+    PP P P    +P     HP    T  P+ PP
Sbjct: 247 AAP----PAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPG---HPAGPPTAAPAVPP 299

Query: 163 PAASRYGQTPGREPRVQAPGLGPC---GRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVG 219
           PAA++ G + G  P       GP    G+P  G   +        +  ++ +     A  
Sbjct: 300 PAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQ 359

Query: 220 GDRTDIPSAIAAGPARTPDRHG-LPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSC 278
                 P++ AA     P   G LP P + P P  G+   G P G +G    + S  P+ 
Sbjct: 360 TLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGT-PTGLPKGAAGAVTQSLSRTPTA 418

Query: 279 ANVLLRA 285
               +RA
Sbjct: 419 TTSGIRA 425



 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 90/339 (26%), Positives = 117/339 (34%), Gaps = 47/339 (13%)

Query: 57  SREISLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLR 116
           S E  L   AA  H LA   TP  R   A        SG+    A A         PG  
Sbjct: 28  SLESQLAASAAHHHHLA-PRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAA 86

Query: 117 PQGTPAMRA------PSHKGTPPTPN----PWGPEQPQNRHKHPKKGVTGGPSPPPPAAS 166
           P+  PA RA      P   G PP+P     P GP  P  + + P +G  G  +P P AA+
Sbjct: 87  PEPPPAGRARPGGGGPQRPG-PPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAA 145

Query: 167 RYGQTPGREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGT---------RQRIPLTDAA 217
                 G EP    P      +PA    L+     G G G          +   P     
Sbjct: 146 ---VAAGPEPAPAGP-----AKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQT 197

Query: 218 VGGDRTDIPSAIAAGPARTPDRHG------LPIPGSTPT-----PMVGSGRLGAPVGRSG 266
           + G    + S  AA PA +   +G      LP P +  T     P VG+    AP   S 
Sbjct: 198 LNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSP 257

Query: 267 GGASARSSRPSCANVLLRADASLGTVLSVLWTGQLSRGWALLPP------GDAGRHLETS 320
             A A ++  +       A A+L         G  +   A+ PP      G AG     +
Sbjct: 258 PAAPAPAAPAAAPPPPPPAPATLARPPGHP-AGPPTAAPAVPPPAAAQNGGSAGAAPAPA 316

Query: 321 VISAGVAAGIWLVEPGEAAQDPATGAARFGPRSCPLGSP 359
             + G A       PG AA  PA G     P+     +P
Sbjct: 317 PAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAP 355



 Score = 35.4 bits (80), Expect = 0.083
 Identities = 62/278 (22%), Positives = 88/278 (31%), Gaps = 48/278 (17%)

Query: 9   PCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLR--GDQTTGGQAPSREIS---LG 63
           P  GG  G  G P  G AAA P        P+  +       QT     P+   +   +G
Sbjct: 317 PAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIG 376

Query: 64  PWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAM 123
           P   G      +  P    TP  + +     G A  +  ++    T    G+R   TP +
Sbjct: 377 PTMQGALPSPAAVPPPAPGTPTGLPK-----GAAGAVTQSLSRTPTATTSGIRATLTPTV 431

Query: 124 RAPSHKGTPPTPN-------PWG--------------PEQ---PQNRHKHPKKGVTGGPS 159
            AP     P  P        P G              P+Q         H +   T  P 
Sbjct: 432 LAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHAQPQTTMAPR 491

Query: 160 PPPPAASRYGQTPGREPRVQAPGLGPCGRPASGRLLSLHLEKG----DGKGTRQRIPLTD 215
           P  P ++     P +   VQAPG     R  +   +   + +         T QR P   
Sbjct: 492 PATPTSA----PPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPSATLQRSPGVQ 547

Query: 216 AAV---GGDRTDIPSAIAAGPARTPDRHGLPIPGSTPT 250
             +   G  +T       A    TP R    +PG+T T
Sbjct: 548 PQLVLGGAAQTASLGTATAVQTGTPQR---TVPGATTT 582


>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
          Length = 416

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 77/286 (26%), Positives = 97/286 (33%), Gaps = 61/286 (21%)

Query: 6   QKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPW 65
           Q PP +GG   QP  P        P   P G  P+      G++  G   P +    GP 
Sbjct: 58  QGPPPQGG--NQPQGPPP------PPGKPQGPPPQG-----GNKPQGPPPPGKP--QGPP 102

Query: 66  AAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRA 125
             G      S +P   ++P    + P   G  QP        Q  P P  +PQG P    
Sbjct: 103 PQGDK----SRSP---RSPPGKPQGPPPQGGNQP--------QGPPPPPGKPQGPPPQGG 147

Query: 126 PSHKGTPPTPNPWGPEQPQNRHKH-------------PKKGVTGGPSPPPPAASRYGQTP 172
              +G PP   P GP  PQ  +K              P +G      PPPP     G  P
Sbjct: 148 NKPQGPPPPGKPQGP-PPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 206

Query: 173 --GREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIA 230
             G +P+   P   P G P  G   S       GK      P      GG++   P    
Sbjct: 207 QGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGK------PQGPPPQGGNQPQGPPPPP 260

Query: 231 AGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVG-RSGGGASARSSR 275
             P   P + G    G  P         G P G    GG+ +RSSR
Sbjct: 261 GKPQGPPPQGGNKPQGPPPP--------GKPQGPPPQGGSKSRSSR 298



 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 71/271 (26%), Positives = 88/271 (32%), Gaps = 52/271 (19%)

Query: 6   QKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPW 65
           Q PP +GG   QP  P        P   P G  P+      G++  G   P +    GP 
Sbjct: 181 QGPPPQGG--NQPQGPPP------PPGKPQGPPPQG-----GNKPQGPPPPGKP--QGPP 225

Query: 66  AAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRA 125
             G +    + +P G+       + P   G  QP        Q  P P  +PQG P    
Sbjct: 226 PQGDNKSQSARSPPGKP------QGPPPQGGNQP--------QGPPPPPGKPQGPPPQGG 271

Query: 126 PSHKGTPPTPNPWGPEQPQNRHKH-------------PKKGVTGGPSPPPPAASRYGQTP 172
              +G PP   P GP  PQ   K              P +G      PPPP     G  P
Sbjct: 272 NKPQGPPPPGKPQGP-PPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 330

Query: 173 --GREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIA 230
             G +P+   P   P G P  G   S       GK      P       G+    P   A
Sbjct: 331 QGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGK------PQGPPQQEGNNPQGPPPPA 384

Query: 231 AGPARTPDRHGLPIPGSTPTPMVGSGRLGAP 261
            G  + P       P   P P  G GR   P
Sbjct: 385 GGNPQQPQAPPAGQPQGPPRPPQG-GRPSRP 414



 Score = 40.0 bits (92), Expect = 0.003
 Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 108 QTVPGPGLRPQGTPAMRAPSHKGTPPTP-NPWGPEQPQNRHKHPKKGVTGGPSPPPPAA- 165
           Q  P P  +PQG P       +G PP P  P GP  PQ  +K       G P  PPP   
Sbjct: 48  QGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP-PPQGGNKPQGPPPPGKPQGPPPQGD 106

Query: 166 -SRYGQTPGREPRVQAP--GLGPCGRP 189
            SR  ++P  +P+   P  G  P G P
Sbjct: 107 KSRSPRSPPGKPQGPPPQGGNQPQGPP 133



 Score = 37.0 bits (84), Expect = 0.029
 Identities = 33/94 (35%), Positives = 35/94 (37%), Gaps = 21/94 (22%)

Query: 111 PGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSP--------PP 162
           P  G +PQG P     S  G P  P P G  QPQ     P  G   GP P        PP
Sbjct: 41  PQGGNKPQGPP-----SPPGKPQGPPPQGGNQPQG--PPPPPGKPQGPPPQGGNKPQGPP 93

Query: 163 PAASRYGQTP----GREPRVQAPGLGPCGRPASG 192
           P     G  P     R PR  +P   P G P  G
Sbjct: 94  PPGKPQGPPPQGDKSRSPR--SPPGKPQGPPPQG 125



 Score = 35.0 bits (79), Expect = 0.11
 Identities = 50/202 (24%), Positives = 64/202 (31%), Gaps = 51/202 (25%)

Query: 6   QKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPW 65
           Q PP +GG   QP  P        P   P G  P+      G++  G   P +    GP 
Sbjct: 243 QGPPPQGG--NQPQGPPP------PPGKPQGPPPQG-----GNKPQGPPPPGKP--QGPP 287

Query: 66  AAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRA 125
             G      S +P G+       + P   G  QP        Q  P P  +PQG P    
Sbjct: 288 PQGGSKSRSSRSPPGKP------QGPPPQGGNQP--------QGPPPPPGKPQGPPPQGG 333

Query: 126 PSHKGTPPTPNPWGP----------------------EQPQNRHKHPKKGVTGGPSPPPP 163
              +G PP   P GP                      +Q  N  + P     G P  P  
Sbjct: 334 NKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQA 393

Query: 164 AASRYGQTPGREPRVQAPGLGP 185
             +   Q P R P+   P   P
Sbjct: 394 PPAGQPQGPPRPPQGGRPSRPP 415



 Score = 34.7 bits (78), Expect = 0.14
 Identities = 44/162 (27%), Positives = 54/162 (33%), Gaps = 26/162 (16%)

Query: 117 PQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTP--GR 174
           PQG     AP   G  P   P  P +PQ     P +G      PPPP     G  P  G 
Sbjct: 36  PQG-----APPQGGNKPQGPPSPPGKPQG---PPPQGGNQPQGPPPPPGKPQGPPPQGGN 87

Query: 175 EPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPA 234
           +P+   P   P G P  G       +K     +    P      GG++   P      P 
Sbjct: 88  KPQGPPPPGKPQGPPPQG-------DKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ 140

Query: 235 RTPDRHGLPIPGSTPTPMVGSGRLGAPVG-RSGGGASARSSR 275
             P + G    G  P         G P G    G   +RSSR
Sbjct: 141 GPPPQGGNKPQGPPPP--------GKPQGPPPQGDNKSRSSR 174


>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
           preproprotein [Homo sapiens]
          Length = 198

 Score = 48.9 bits (115), Expect = 7e-06
 Identities = 43/156 (27%), Positives = 53/156 (33%), Gaps = 9/156 (5%)

Query: 108 QTVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASR 167
           Q  P P  +PQG P       +G PP   P GP    ++ + P+        PPP     
Sbjct: 48  QGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKP 107

Query: 168 YGQTP--GREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDI 225
            G  P  G +P+   P   P G PA G   S       GK      P       G+    
Sbjct: 108 QGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGK------PQGPPQQEGNNPQG 161

Query: 226 PSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLGAP 261
           P   A G  + P       P   P P  G GR   P
Sbjct: 162 PPPPAGGNPQQPQAPPAGQPQGPPRPPQG-GRPSRP 196



 Score = 38.5 bits (88), Expect = 0.010
 Identities = 46/171 (26%), Positives = 60/171 (35%), Gaps = 24/171 (14%)

Query: 8   PPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPWAA 67
           PP  G   G P           P   P G  P+      GD++   ++P  +    P   
Sbjct: 51  PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ------GDKSRSPRSPPGKPQGPPPQG 104

Query: 68  GTHFLAISTTPWGRKTPACISELPTSSGTAQ-PLANAVCEVQTVPGPGLRPQGTPAMRAP 126
           G         P G   P    + P   G  Q P A    + Q+   P  +PQG P     
Sbjct: 105 GK---PQGPPPQGGNKP----QGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGN 157

Query: 127 SHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPR 177
           + +G PP P    P+QPQ     P  G   GP  PP      G  P R P+
Sbjct: 158 NPQG-PPPPAGGNPQQPQ----APPAGQPQGPPRPP-----QGGRPSRPPQ 198



 Score = 37.7 bits (86), Expect = 0.017
 Identities = 48/170 (28%), Positives = 61/170 (35%), Gaps = 19/170 (11%)

Query: 117 PQGTPAMRAPSHKGTPPTPN-PWGPEQPQNRHKHPKKGVTGGPSPPPPAA--SRYGQTPG 173
           PQG         +G PP P  P GP  PQ  +K       G P  PPP    SR  ++P 
Sbjct: 36  PQGPSPQGGNKPQGPPPPPGKPQGPP-PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPP 94

Query: 174 REPRVQAP-GLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAG 232
            +P+   P G  P G P  G        K  G     + P    A GG ++    +    
Sbjct: 95  GKPQGPPPQGGKPQGPPPQGG------NKPQGPPPPGK-PQGPPAQGGSKSQSARSPPGK 147

Query: 233 PARTPDRHGLPIPGSTPTPMVGSGR------LGAPVGRSGGGASARSSRP 276
           P   P + G   P   P P  G+ +       G P G        R SRP
Sbjct: 148 PQGPPQQEG-NNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 196



 Score = 35.0 bits (79), Expect = 0.11
 Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 108 QTVPGPGLRPQGTPAMR-APSHKGTPPTPNPWGPEQPQ-NRHKHPKKGVTGGPSPPPPAA 165
           Q  P PG +PQG PA   + S     P   P GP Q + N  + P     G P  P    
Sbjct: 119 QGPPPPG-KPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPP 177

Query: 166 SRYGQTPGREPRVQAPGLGP 185
           +   Q P R P+   P   P
Sbjct: 178 AGQPQGPPRPPQGGRPSRPP 197



 Score = 29.3 bits (64), Expect = 6.0
 Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 5/52 (9%)

Query: 130 GTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAP 181
           G P  P+P G  +PQ     P     G P  PPP      Q P    + Q P
Sbjct: 34  GNPQGPSPQGGNKPQGPPPPP-----GKPQGPPPQGGNKPQGPPPPGKPQGP 80


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 67/271 (24%), Positives = 82/271 (30%), Gaps = 37/271 (13%)

Query: 16   GQPGHPNTGGAAAHPTYHPMGHR--PRTCILLRGDQTTGGQAP-----SREISLGPWAAG 68
            G P  P+  GA   P   P   +  P      +G  T     P     S   +  P  A 
Sbjct: 998  GGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAP 1057

Query: 69   THFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTP-----AM 123
            T   A   +P G      +   PT      P         +  G  + P  TP      +
Sbjct: 1058 TTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGL 1117

Query: 124  RAPSHKGTPPTPNPWGPEQPQNRHKHPKKGV-----------TGGPSPPPPAASRYGQTP 172
              P HKG P TP    P         P KG             GG + PPP  +    TP
Sbjct: 1118 ATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGA--PTTP 1175

Query: 173  GREPRVQAPGL---GPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAV-----GGDRTD 224
               P     GL    P G P +        + G    + +  P T AA      GG  T 
Sbjct: 1176 AATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATP 1235

Query: 225  IPSAIAAGPARTPDR----HGLPIPGSTPTP 251
             P      PA TP         P P   PTP
Sbjct: 1236 SPKGAPTTPAATPPSPKGGPATPPPKGAPTP 1266



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 55/196 (28%), Positives = 66/196 (33%), Gaps = 34/196 (17%)

Query: 75   STTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSHKGTPPT 134
            S +P G  TP   +      G A P        +  P P       PA   PS KG P T
Sbjct: 933  SPSPKGAPTPPAATPPSPKGGPATP------SPKWAPTP-------PAATPPSPKGGPAT 979

Query: 135  PNPWG-PEQPQNRHKHPKKGVT-----GGPSPPPPAASRYGQTPGREPRVQAPGLGPCGR 188
            P+P G P  P      PK G       G P+PP         +P   P  +     P   
Sbjct: 980  PSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAAT 1039

Query: 189  PASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPI-PGS 247
            P S             KG+    PL   A       +PS    GPA TP   G P  P +
Sbjct: 1040 PPS------------PKGSPAATPLPKGAPTTPAATLPSP-KGGPA-TPSLKGAPTPPAA 1085

Query: 248  TPTPMVGSGRLGAPVG 263
            TP    G     +P G
Sbjct: 1086 TPPSPKGGPATPSPKG 1101



 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 70/275 (25%), Positives = 90/275 (32%), Gaps = 35/275 (12%)

Query: 18   PGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPWAAGTHFLAISTT 77
            PG     G +      P+   P+ C       T    A +   S G       +LA S +
Sbjct: 746  PGTKKVDGISHTSALAPVASSPKEC------PTEDSGASATASSKGTLT----YLADSPS 795

Query: 78   PWGRKTPACISELPTSSGTAQP------LANAVCEVQT--VPGPGLRPQGTPAMRAPSHK 129
            P G          PT  G+A P      L++ V  V+   +P   L  QG+    A +H 
Sbjct: 796  PLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHS 855

Query: 130  GTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLGPCGRP 189
             TPP+P   G   P        KGVT  P   P  +      P   P   AP   P    
Sbjct: 856  PTPPSPK--GAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSM 913

Query: 190  ASG---RLLSLHLEKG-DGKGTRQRIPLTDAAV-----GGDRTDIPSAIAAGPARTPDR- 239
             S    +  +    KG     + +  P   AA      GG  T  P      PA TP   
Sbjct: 914  TSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSP 973

Query: 240  ---HGLPIPGSTPTPMVGS--GRLGAPVGRSGGGA 269
                  P P   PTP   +     G P   S  GA
Sbjct: 974  KGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGA 1008



 Score = 41.2 bits (95), Expect = 0.002
 Identities = 61/229 (26%), Positives = 72/229 (31%), Gaps = 47/229 (20%)

Query: 64   PWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTP-- 121
            P  A T   A   +P G          PT+     P         +  G    P  TP  
Sbjct: 1168 PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPS 1227

Query: 122  ---AMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRV 178
                +  PS KG P TP    P         PK    GGP+ PPP  +    TP      
Sbjct: 1228 PKGGLATPSPKGAPTTPAATPPS--------PK----GGPATPPPKGA---PTP------ 1266

Query: 179  QAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLT-DAAVGGDRTDIPSAIAAGPARTP 237
                  P   P S   L   L     KG      +T  +  GG  T  P      PA TP
Sbjct: 1267 ------PAATPPS---LKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATP 1317

Query: 238  ----DRHGLPIPGSTPTPMV-------GSGRLGAPVGRSGGGASARSSR 275
                   G P P   PTP         G+  L A    S GG +  SS+
Sbjct: 1318 PSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSK 1366



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 79/316 (25%), Positives = 100/316 (31%), Gaps = 48/316 (15%)

Query: 8    PPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLG-PWA 66
            PP   G    P H      A      P G  P T              PS + S G P  
Sbjct: 1271 PPSLKGGLATPPHKGAPNPAVVTPPSPKGG-PATSPPKGAPTPPAATPPSPKGSPGTPPP 1329

Query: 67   AGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAP 126
             G       T P  + TP   +  P+S G   P   +  E  T P      +G PAM  P
Sbjct: 1330 KGAPTPPAVTPPSPKGTPTLPATTPSSKGG--PTTPSSKEGPTPPAATPSHKGGPAMTPP 1387

Query: 127  SHKGTPPTPNPWG-PEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLGP 185
            S K  P  P+P G P  P      PKK      +P  P       TP +   +  P + P
Sbjct: 1388 SPKRGPAIPSPKGDPTSPAVIPLSPKK------APATPVTREGAATPSKGD-LTPPAVTP 1440

Query: 186  CGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIP 245
                                 + ++ P T A  GG  T         PA TP     P P
Sbjct: 1441 V--------------------SLKKAPATSAPKGGPATPSSKGDPTLPAVTP-----PSP 1475

Query: 246  GSTPTP---MVGSGRLGAPVGRSGGGA--------SARSSRPSCANVLLRADASLGTVLS 294
               P P      S    AP   +  GA        S+    P+  +      A   T+LS
Sbjct: 1476 KEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLS 1535

Query: 295  VLWTGQLSRGWALLPP 310
                  L+   AL+PP
Sbjct: 1536 KKTPATLAPKEALIPP 1551



 Score = 37.4 bits (85), Expect = 0.022
 Identities = 64/290 (22%), Positives = 92/290 (31%), Gaps = 33/290 (11%)

Query: 6    QKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLG-- 63
            +K P      G P  P++ G    P   P   +           ++  +AP+    +G  
Sbjct: 1444 KKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAP 1503

Query: 64   --PWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTP 121
              P    +    +  TP  R+ P   +    S  T   LA         P   L P   P
Sbjct: 1504 TLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLA---------PKEALIP---P 1551

Query: 122  AMRAPSHKGTPPTPNP-WGPEQPQNRHKHPKKGVT-----GGPSP-----PPPAASRYGQ 170
            AM  PS K TP  P P   P  P ++       VT     G PSP     PP   S   +
Sbjct: 1552 AMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPK 1611

Query: 171  TPGREPRV--QAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSA 228
                 P V   +P  GP      G   S  +     K +          +G         
Sbjct: 1612 EAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKG 1671

Query: 229  IAAGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSC 278
            + A    T  +  L  P    TP++ +     P  +     S+ +S P C
Sbjct: 1672 LPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKK----SSATSPPIC 1717



 Score = 30.0 bits (66), Expect = 3.5
 Identities = 40/160 (25%), Positives = 52/160 (32%), Gaps = 49/160 (30%)

Query: 50  TTGGQAPSREISLGPWAAGTHFLAISTTPWGRKTPACISELPTSS----------GTAQP 99
           TT     +   +  P+  GT  LA    P    T   +  +PT+S           T  P
Sbjct: 661 TTAKGTSTYTTTASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAP 720

Query: 100 LANAVCEVQ---TVPGPGLRPQGTP-------------------------------AMRA 125
           LA  V   +   +VP P L P GTP                               A   
Sbjct: 721 LATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASAT 780

Query: 126 PSHKGT----PPTPNPWGPE-QPQNRHKHPKKGVTGGPSP 160
            S KGT      +P+P G    PQ +    KKG  G  +P
Sbjct: 781 ASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTP 820


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 50/170 (29%), Positives = 61/170 (35%), Gaps = 15/170 (8%)

Query: 111 PGPGLRPQGTPAMRAPSH-KGTPPTPNPWGPEQPQNRH--KHPKKGVTGGPSPPPPAASR 167
           PGPG      P    P H +   P P    P+QP       HP+      P PPP  +S+
Sbjct: 49  PGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSK 108

Query: 168 --YGQTPGREPRV-QAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTD 224
               Q PG  P V  AP       PA+          G G        +T A  G     
Sbjct: 109 PVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPT 168

Query: 225 IPSAIAAGPARTPDRHGLP------IPGSTPTPMVGSGRLGAPVGRSGGG 268
            PS   +G   TP + G P      +PG  P P  G G  G   G+  GG
Sbjct: 169 PPS---SGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGG 215



 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 39/138 (28%), Positives = 47/138 (34%), Gaps = 21/138 (15%)

Query: 87  ISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSHKGTPPTPNPWG-PEQPQN 145
           +   P +S +A P            GPG  P   PA+ +      PPTP   G P  P  
Sbjct: 121 VGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQ 180

Query: 146 RHKHPKKGVTGGPSPPPPAASRYGQTP-----------GREPRVQAPGLGPCGRPASGRL 194
                     GGP PPP A    G  P           G+ P    PG GP      G  
Sbjct: 181 ---------AGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHP 231

Query: 195 LSLHLEKGDGKGTRQRIP 212
              H   G+ +G RQ  P
Sbjct: 232 KPPHRGGGEPRGGRQHHP 249



 Score = 36.6 bits (83), Expect = 0.037
 Identities = 41/135 (30%), Positives = 47/135 (34%), Gaps = 22/135 (16%)

Query: 63  GPWAAGTHFLAISTTPWGRKTPACISELPTSSG--TAQPLANAVCEVQT-VPGPGLRPQG 119
           GP    T   A+++ P G   P      P SSG  T  P A         VPGPG  P+ 
Sbjct: 146 GPGPTPTPPPAVTSAPPGAPPPT-----PPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQ 200

Query: 120 TPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSP------PPPAASRYGQTPG 173
            P    P     P  P P G         HPK    GG  P       PP   ++ Q P 
Sbjct: 201 GPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGP- 259

Query: 174 REPRVQAPGLGPCGR 188
                  P  GP GR
Sbjct: 260 -------PPGGPGGR 267



 Score = 30.8 bits (68), Expect = 2.1
 Identities = 37/152 (24%), Positives = 42/152 (27%), Gaps = 38/152 (25%)

Query: 125 APSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLG 184
           AP     PP  +   P  P      P  G    P+PPP   S              PG  
Sbjct: 118 APGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTS------------APPGAP 165

Query: 185 PCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPI 244
           P   P+SG                  +P T    GG     P A   GP   P +     
Sbjct: 166 PPTPPSSG------------------VPTTPPQAGGPPP--PPAAVPGPGPGPKQ----- 200

Query: 245 PGSTPTPMVGSGRLGAPVGRSGGGASARSSRP 276
            G  P    G    G P    G G S     P
Sbjct: 201 -GPGPGGPKGGKMPGGPKPGGGPGLSTPGGHP 231


>gi|115511036 alpha-kinase 3 [Homo sapiens]
          Length = 1907

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 64/224 (28%), Positives = 89/224 (39%), Gaps = 45/224 (20%)

Query: 84   PACISELPTSSGTAQPLANAVCEVQTVPG------PGLRPQGTPAMRAPS--HKGT---P 132
            P+   +LP ++G   PL N  C VQT  G      PG  P+   A+   S  H+ T   P
Sbjct: 937  PSRTPKLPPTAGPRAPL-NIECFVQTPEGSCFPKKPGCLPRSEEAVVTASRNHEQTVLGP 995

Query: 133  PTPNPWGPEQPQNRHKHPKKGVTG----GPSPPPPAASRYGQTPGREPRVQAPGLGPCGR 188
             + N   P QP   H+   + V G    GP    P  ++   +P + P+ + PG  PC  
Sbjct: 996  LSGNLMLPAQPP--HEGSVEQVGGERCRGPQSSGPVEAKQEDSPFQCPKEERPGGVPCMD 1053

Query: 189  PASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTP-DRHG-----L 242
                 L           G  Q +P   +  G   T + ++  AGP  TP  +HG     L
Sbjct: 1054 QGGCPL----------AGLSQEVPTMPSLPG---TGLTASPKAGPCSTPTSQHGSTATFL 1100

Query: 243  P-----IPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANV 281
            P     +  S PT  +G   LG P         A SS  +CA V
Sbjct: 1101 PSEDQVLMSSAPTLHLG---LGTPTQSHPPETMATSSEGACAQV 1141


>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
           preproprotein [Homo sapiens]
          Length = 331

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 47/181 (25%), Positives = 61/181 (33%), Gaps = 28/181 (15%)

Query: 108 QTVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKK--GVTGGP------- 158
           Q  P P  +PQG P       +G PP   P GP    ++ + P+   G   GP       
Sbjct: 48  QGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQ 107

Query: 159 --SPPPPAASRYGQTP--GREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLT 214
              PPPP     G  P  G  P+   P   P G P  G       +K     +    P  
Sbjct: 108 PQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQG-------DKSRSPRSPPGKPQG 160

Query: 215 DAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSS 274
               GG++   P      P   P + G    G  P         G P G    G  +RSS
Sbjct: 161 PPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPP--------GKPQGPPPQGDKSRSS 212

Query: 275 R 275
           +
Sbjct: 213 Q 213



 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 66/259 (25%), Positives = 81/259 (31%), Gaps = 46/259 (17%)

Query: 8   PPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPWAA 67
           PP  G   G P           P   P G  P+      GD++   ++P  +    P   
Sbjct: 112 PPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQ------GDKSRSPRSPPGKPQGPPPQG 165

Query: 68  GTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTP-----A 122
           G         P G   P    + P   G  +P        Q  P PG +PQG P     +
Sbjct: 166 GNQ-------PQGPPPPPGKPQGPPPQGGKKP--------QGPPPPG-KPQGPPPQGDKS 209

Query: 123 MRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPG 182
             + S  G P  P P G  QPQ            GP PPP          G +P+   P 
Sbjct: 210 RSSQSPPGKPQGPPPQGGNQPQ------------GPPPPPGKPQGPPPQGGNKPQGPPPP 257

Query: 183 LGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGL 242
             P G PA G   S       GK      P       G+    P   A G  + P     
Sbjct: 258 GKPQGPPAQGGSKSQSARSPPGK------PQGPPQQEGNNPQGPPPPAGGNPQQPQAPPA 311

Query: 243 PIPGSTPTPMVGSGRLGAP 261
             P   P P  G GR   P
Sbjct: 312 GQPQGPPRPPQG-GRPSRP 329



 Score = 40.8 bits (94), Expect = 0.002
 Identities = 53/194 (27%), Positives = 68/194 (35%), Gaps = 36/194 (18%)

Query: 6   QKPPCRGGCW--------GQP-GHPNTGGAAAH---PTYHPMGHRPRTCILLRGDQTTGG 53
           Q PP +GG          G+P G P  GG       P   P G  P+      GD++   
Sbjct: 159 QGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQ------GDKSRSS 212

Query: 54  QAPSREISLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGP 113
           Q+P  +    P   G         P G   P    + P   G  +P        Q  P P
Sbjct: 213 QSPPGKPQGPPPQGGNQ-------PQGPPPPPGKPQGPPPQGGNKP--------QGPPPP 257

Query: 114 GLRPQGTPAMR-APSHKGTPPTPNPWGPEQPQ-NRHKHPKKGVTGGPSPPPPAASRYGQT 171
           G +PQG PA   + S     P   P GP Q + N  + P     G P  P    +   Q 
Sbjct: 258 G-KPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQG 316

Query: 172 PGREPRVQAPGLGP 185
           P R P+   P   P
Sbjct: 317 PPRPPQGGRPSRPP 330



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 50/201 (24%), Positives = 63/201 (31%), Gaps = 18/201 (8%)

Query: 6   QKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGG--QAPSREISLG 63
           Q PP  G   G P   +   +   P   P G  P+     +G     G  Q P  +    
Sbjct: 130 QGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKK 189

Query: 64  PWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAM 123
           P             P G K+ +  S      G      N   + Q  P P  +PQG P  
Sbjct: 190 PQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGN---QPQGPPPPPGKPQGPPPQ 246

Query: 124 RAPSHKGTPPTPNPWGP-----------EQPQNRHKHPKKGVTGGPSPPPPAASRYGQTP 172
                +G PP   P GP             P  + + P +     P  PPP A    Q P
Sbjct: 247 GGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQP 306

Query: 173 GREPRVQAPGLGPCGRPASGR 193
              P  Q    GP   P  GR
Sbjct: 307 QAPPAGQPQ--GPPRPPQGGR 325



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 37/146 (25%), Positives = 47/146 (32%), Gaps = 27/146 (18%)

Query: 130 GTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLGPCGRP 189
           G P  P+P G  +PQ     P     G P  PPP         G +P+   P   P G P
Sbjct: 34  GNPQGPSPQGGNKPQGPPPPP-----GKPQGPPPQG-------GNKPQGPPPPGKPQGPP 81

Query: 190 ASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTP 249
             G       +K     +    P      GG++   P      P   P + G    G  P
Sbjct: 82  PQG-------DKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPP 134

Query: 250 TPMVGSGRLGAPVGRSGGGASARSSR 275
                    G P G    G  +RS R
Sbjct: 135 P--------GKPQGPPPQGDKSRSPR 152


>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
          Length = 753

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 53/213 (24%), Positives = 75/213 (35%), Gaps = 21/213 (9%)

Query: 80  GRKTPACISELPTSSGTAQPLANAVCEVQTVPGP---GLRPQGTPAMRAPSHKGTPPT-- 134
           GR T + +S+ P  +G+    +N   +   VP     G  P  +     P + G P    
Sbjct: 289 GRSTDSEVSQSPAKNGSKPVHSNQHPQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAA 348

Query: 135 -PNPWGPE-QPQNRHKHPKKGVTGGPSP-----PPPAASRYGQTPGREPRVQAPGLGPCG 187
            P+  GP+  P   H       +G P+P      PPA S    T  R P VQ  G G  G
Sbjct: 349 PPSALGPKASPAPSHN------SGTPAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGG 402

Query: 188 RPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGS 247
               G   S +   G G G +       + V     ++  + + G   +    G P    
Sbjct: 403 SGGGGSSSSSNSSAGGGAGKQNGATSYSSVVADSPAEVALSSSGGNNASSQALGPPSGPH 462

Query: 248 TPTPMVG-SGRLGAPVGRSG--GGASARSSRPS 277
            P P         AP G  G   G+   S  PS
Sbjct: 463 NPPPSTSKEPSAAAPTGAGGVAPGSGNNSGGPS 495


>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
          Length = 663

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 77/294 (26%), Positives = 98/294 (33%), Gaps = 71/294 (24%)

Query: 74  ISTTPWGRKTPACISEL----PTSSGTAQPLANAVCEVQTV----PGPGLRPQG------ 119
           ++TTP G +  A  S L    P+ +  A P A A           PG G  P G      
Sbjct: 86  VATTPLGPEHMAQASTLGLSPPSQAFPAHPEAPAAAARAAALVAHPGAGSYPCGGGSSGA 145

Query: 120 TPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPG------ 173
            P+   P     PPTP+P  P  P              P PPPPA S Y  T        
Sbjct: 146 QPSAPPPPAPPLPPTPSP--PPPP--------------PPPPPPALSGYTTTNSGGGGSS 189

Query: 174 -----------REPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQR-IPLTDAA---V 218
                      R+    AP     G P  G       E+  G G+ Q   P   +A   +
Sbjct: 190 GKGHSRDFVLRRDLSATAPAAAMHGAPLGG-------EQRSGTGSPQHPAPPPHSAGMFI 242

Query: 219 GGDRTDIPSAIAAGPARTPDRHGLP-IPGSTPTPMVGSGRLGAPVGRSGGGAS--ARSSR 275
               T      + GPA  P  H  P  PG  P P+ G  RLG     +   A    R+  
Sbjct: 243 SASGTYAGPDGSGGPALFPALHDTPGAPGGHPHPLNGQMRLGLAAAAAAAAAELYGRAEP 302

Query: 276 PSCANVLLRADASLGTVLSVLWTGQLSRGWALLPPGDAGRHLETSVISAGVAAG 329
           P         DA  G V +       +   AL   G    +L  +  +A  AAG
Sbjct: 303 PFAPR---SGDAHYGAVAA-------AAAAALHGYGAVNLNLNLAAAAAAAAAG 346


>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
          Length = 680

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 89/346 (25%), Positives = 108/346 (31%), Gaps = 82/346 (23%)

Query: 3   RTDQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISL 62
           R +Q  P   G  G  GHP   G    P Y   G        L+G+    G  P    ++
Sbjct: 56  RGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPG--------LQGEPGLPG--PPGPSAV 105

Query: 63  G-PWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPG-PGLR-PQG 119
           G P   G         P+G K     + LP   G   P         +VPG PG + P G
Sbjct: 106 GKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTG 165

Query: 120 TPAMRA-PSHKGTPPTP--------------------------NPWGPEQPQNRHKHPKK 152
            P  R  P  KG P  P                           P GP  P    K  + 
Sbjct: 166 APGPRGFPGEKGAPGVPGMNGQKGEMGYGAPGRPGERGLPGPQGPTGPSGPPGVGKRGEN 225

Query: 153 GVTGGP---------------SPP----------------PPAASRYGQ--TPGREPRVQ 179
           GV G P                PP                P AA   GQ   PG +    
Sbjct: 226 GVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPG 285

Query: 180 APGL-GPCGRPASGR--LLSLHLEKG-----DGKGTRQRIPLTDAAVGGDRTDIPSAIA- 230
           APG+ GP G P  G+  L  L  E+G      G G +              T  P  +  
Sbjct: 286 APGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGP 345

Query: 231 AGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRP 276
            GP   P  HGLP P     P   +G  GA   R   G+  +   P
Sbjct: 346 QGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYP 391



 Score = 36.6 bits (83), Expect = 0.037
 Identities = 49/166 (29%), Positives = 65/166 (39%), Gaps = 25/166 (15%)

Query: 84  PACISELPTSSGTAQPLANAVCEVQTVPG-PGLR-PQGTPAMRA-PSHKGTPPTPNPWGP 140
           PA    +P  +G A P        +  PG PG R P G P +   P  KG P +P P GP
Sbjct: 426 PAGAKGMPGHNGEAGP--------RGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGPPGP 477

Query: 141 EQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLGPCGRPASGRLLSLHLE 200
                +  +   G TG P PP P           EP +  P  GP G P    +    ++
Sbjct: 478 AGIATKGLN---GPTGPPGPPGPRGH------SGEPGLPGPP-GPPGPPGQAVMPEGFIK 527

Query: 201 KGDGKGTRQRIPLTDAAVGGDRTDIP-SAIAAGPARTPDRHGLPIP 245
            G  + +    PL  A  G   T +P SA     ++     G PIP
Sbjct: 528 AGQ-RPSLSGTPLVSANQG--VTGMPVSAFTVILSKAYPAIGTPIP 570


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 64/238 (26%), Positives = 80/238 (33%), Gaps = 51/238 (21%)

Query: 131 TPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLGPCGRPA 190
           +PPT  P      Q   +HP     GGP   P  ++ +G  P R  R      GP G P 
Sbjct: 53  SPPTVAPAASAGSQ---EHPG---AGGPLCFPARSAAWGP-PARASRAAGRRAGPAGPPC 105

Query: 191 SGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTPT 250
                              R P    A    R+  P      PA      G     S  T
Sbjct: 106 -------------------RAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGT 146

Query: 251 PMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLGTVLSVLWTGQLSRGWALLPP 310
             V + RL  P G +  GA +R+ R   +  L R+ +S             SR WA +P 
Sbjct: 147 RSVPARRLPPPCGGTSLGAGSRALRRPGSAALPRSPSS-------------SRRWAAMPG 193

Query: 311 GDAGRHLETSVISAGVAAGIWLVEPGEAAQDPATGAARFGPRSCPLGSPAVLAVTTGW 368
             A R           A G W V    AA  PA  A+   P     G+PA  A   GW
Sbjct: 194 PGAPR---------PGAPGTWPVGFAVAA-PPAAAASVAPPPPAVAGAPA--AAFRGW 239


>gi|56549694 enabled homolog isoform a [Homo sapiens]
          Length = 591

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 63/206 (30%), Positives = 76/206 (36%), Gaps = 48/206 (23%)

Query: 79  WGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSHKGT------- 131
           W R+     +  P S  T  PL N+V    +   PGL+    PA   PS +G        
Sbjct: 258 WERERRISSAAAPASVET--PL-NSVLGDSSASEPGLQAASQPA-ETPSQQGIVLGPLAP 313

Query: 132 -PPTPNPWGPEQ------PQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLG 184
            PP P P GP Q      P      P    + GP PPPP      Q P   P   AP L 
Sbjct: 314 PPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPL- 372

Query: 185 PCGRPASGRLLSLHLEKGDGKGTRQRIPLTD--AAVGG---------DRTDIPS---AIA 230
               PASG  L+   E           PLT   AA+ G         + T  PS   AI 
Sbjct: 373 ----PASGFFLASMSE--------DNRPLTGLAAAIAGAKLRKVSRMEDTSFPSGGNAIG 420

Query: 231 AGPARTPDRHGLPIPGSTPTPMVGSG 256
              A +    G    G+ P P+ GSG
Sbjct: 421 VNSASSKTDTG---RGNGPLPLGGSG 443


>gi|39930375 enabled homolog isoform b [Homo sapiens]
          Length = 570

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 63/206 (30%), Positives = 76/206 (36%), Gaps = 48/206 (23%)

Query: 79  WGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSHKGT------- 131
           W R+     +  P S  T  PL N+V    +   PGL+    PA   PS +G        
Sbjct: 258 WERERRISSAAAPASVET--PL-NSVLGDSSASEPGLQAASQPA-ETPSQQGIVLGPLAP 313

Query: 132 -PPTPNPWGPEQ------PQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLG 184
            PP P P GP Q      P      P    + GP PPPP      Q P   P   AP L 
Sbjct: 314 PPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPL- 372

Query: 185 PCGRPASGRLLSLHLEKGDGKGTRQRIPLTD--AAVGG---------DRTDIPS---AIA 230
               PASG  L+   E           PLT   AA+ G         + T  PS   AI 
Sbjct: 373 ----PASGFFLASMSE--------DNRPLTGLAAAIAGAKLRKVSRMEDTSFPSGGNAIG 420

Query: 231 AGPARTPDRHGLPIPGSTPTPMVGSG 256
              A +    G    G+ P P+ GSG
Sbjct: 421 VNSASSKTDTG---RGNGPLPLGGSG 443


>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 480

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 71/268 (26%), Positives = 94/268 (35%), Gaps = 57/268 (21%)

Query: 25  GAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPWAAGTHFLAISTTPWGRKTP 84
           G A  P  HP  H PR                    + GP +AGT  L       G+KT 
Sbjct: 101 GRATPPLPHPGDHHPR-----------------HRKNRGP-SAGTSQL-------GKKTQ 135

Query: 85  ACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAM--RAPSHKGTPPTPNPWGPEQ 142
            C S    + G    L   + E+   P P L+  G  A+  R P + G  PTP    P Q
Sbjct: 136 -CRSLFLRTKG----LCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTP----PRQ 186

Query: 143 -------PQNRHKHPKKGVTGGPSPPPPAASRYGQTPG------REPRVQAPGLGPCGRP 189
                  P+++   P++     P P P A     + PG      REPR+++    P   P
Sbjct: 187 EGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGASREPRLRSRAARPPPAP 246

Query: 190 ASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTP 249
             G L      +  G+             GG++   P A   G  R P   G   P S  
Sbjct: 247 GPGALSRASRSRAAGRP-------GPGFHGGEKAAAPRAPGGGGGRNPGALGRAAPPSRA 299

Query: 250 TPMVGSGRLGAPVG-RSGGGASARSSRP 276
                     A VG R G    A SS+P
Sbjct: 300 RQDAWGLSGCATVGLRRGDCDRAGSSQP 327


>gi|18780273 collagen, type XXI, alpha 1 precursor [Homo sapiens]
          Length = 957

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 52/190 (27%), Positives = 73/190 (38%), Gaps = 24/190 (12%)

Query: 89  ELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSHKGTPPTP-NPWGPEQPQNRH 147
           E+P  +G      N   +V + P P + P G P ++ P  KG P  P NP  P QP    
Sbjct: 422 EIPGFNGEC---LNGPSDVGSTPAPCICPPGKPGLQGP--KGDPGLPGNPGYPGQPGQDG 476

Query: 148 KHPKKGVTGGPSPPPPAASR-------YGQTPGREPRVQAPGL----GPCGRPASGRLLS 196
           K   +G+ G P  P     +       Y   PGR+      GL    G  G P S   + 
Sbjct: 477 KPGYQGIAGTPGVPGSPGIQGARGLPGYKGEPGRDGDKGDRGLPGFPGLHGMPGSKGEMG 536

Query: 197 LHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMVGSG 256
              +KG      ++         G++ +       GPA  P RHG      +P     +G
Sbjct: 537 AKGDKGSPGFYGKK------GAKGEKGNAGFPGLPGPAGEPGRHGKDGLMGSPGFKGEAG 590

Query: 257 RLGAPVGRSG 266
             GAP G+ G
Sbjct: 591 SPGAP-GQDG 599



 Score = 28.9 bits (63), Expect = 7.8
 Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 23/75 (30%)

Query: 110 VPG-PGLR----------PQGTPAMRAPSHKGTPPTPNPWGPEQ------------PQNR 146
           VPG PG+R           +G+     P  +G P  P P GP              P   
Sbjct: 859 VPGRPGVRGLKGLPGRNGEKGSQGFGYPGEQGPPGPPGPEGPPGISKEGPPGDPGLPGKD 918

Query: 147 HKHPKKGVTGGPSPP 161
             H K G+ G P PP
Sbjct: 919 GDHGKPGIQGQPGPP 933


>gi|32307177 forkhead box G1 [Homo sapiens]
          Length = 489

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 34/106 (32%), Positives = 44/106 (41%), Gaps = 20/106 (18%)

Query: 117 PQGTPAMRAPSHKGTPPTPNPWGPEQPQNR-------HKHPKKGVTGGPSPPPPAASRYG 169
           P   P    P  +  PP P P  P+ PQ R        K P++ +   P PPPPAA+  G
Sbjct: 59  PPPAPQPPPPPQQQQPPPPPPPAPQPPQTRGAPAADDDKGPQQLLLPPPPPPPPAAALDG 118

Query: 170 QTPGREPRVQAPGLGPCGRPAS--GRLLSL---HLEKGDGKGTRQR 210
                    +A GLG  G P    G L  +     EKG G G  ++
Sbjct: 119 --------AKADGLGGKGEPGGGPGELAPVGPDEKEKGAGAGGEEK 156


>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
           sapiens]
          Length = 309

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 46/172 (26%), Positives = 61/172 (35%), Gaps = 22/172 (12%)

Query: 108 QTVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASR 167
           +T P PG +P+G P       +G PP P    PE P      P +G      PPP     
Sbjct: 49  RTPPPPG-KPEGRPPQGGNQSQGPPPRPGK--PEGP------PPQGGNQSQGPPPRPGKP 99

Query: 168 YGQTP--GREPRVQAPGLG-PCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTD 224
            GQ P  G + +   P  G P G P  G        +  G   R   P      GG+++ 
Sbjct: 100 EGQPPQGGNQSQGPPPRPGKPEGPPPQGG------NQSQGPPPRPGKPEGPPPQGGNQSQ 153

Query: 225 IPSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASARSSRP 276
            P      P   P + G    G  P P    G+   P  + G  +     RP
Sbjct: 154 GPPPRPGKPEGPPPQGGNQSQGPPPHP----GKPEGPPPQGGNQSQGPPPRP 201



 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 111 PGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQ 170
           P PG +PQG P       +  PP   P GP  P    + P     G P  PPP     G 
Sbjct: 241 PHPG-KPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQ--GG 297

Query: 171 TPGREPRVQAP 181
            P R P+ Q P
Sbjct: 298 RPHRPPQGQPP 308



 Score = 40.0 bits (92), Expect = 0.003
 Identities = 31/92 (33%), Positives = 37/92 (40%), Gaps = 16/92 (17%)

Query: 111 PGPGLRPQGTPAMRAPSHKGTPPTPN-PWGP-----EQPQNRHKHPKKGVTGGPS----- 159
           P PG +P+G P       +G PP P  P GP      +PQ    HP K     P      
Sbjct: 199 PRPG-KPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKP 257

Query: 160 --PPPPAASRYGQTPGREPRVQAPGLGPCGRP 189
             PPPP   +    PG  P  Q P   P G+P
Sbjct: 258 QRPPPPGRPQGPPPPGGNP--QQPLPPPAGKP 287



 Score = 36.6 bits (83), Expect = 0.037
 Identities = 31/88 (35%), Positives = 36/88 (40%), Gaps = 18/88 (20%)

Query: 111 PGPGLRPQGTP------AMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPA 164
           P PG +P+G P      +   P H G P  P P G  Q Q     P     G P  PPP 
Sbjct: 157 PRPG-KPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRP-----GKPEGPPPQ 210

Query: 165 ASRYGQTPGREPRVQAPGLGPCGRPASG 192
                Q+ G  PR   PG  P G P+ G
Sbjct: 211 GG--NQSQGPPPR---PG-KPEGPPSQG 232


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 2 [Homo sapiens]
          Length = 889

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 36/115 (31%), Positives = 44/115 (38%), Gaps = 3/115 (2%)

Query: 157 GPSPPPPAASRYGQTPGREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDA 216
           GP PPPP A    Q P   P    PG GP       R  +L  E  D  G R R+   D+
Sbjct: 21  GPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGGPRGRLRSRDS 80

Query: 217 AVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGASA 271
           + G  R   P A +          G   P  +P    G  R G  V  S  GA++
Sbjct: 81  SCG--RPGTPGAASTAKGSPNGECGRGEPQCSPAGPEGPAR-GPKVSFSCRGAAS 132



 Score = 39.3 bits (90), Expect = 0.006
 Identities = 48/175 (27%), Positives = 59/175 (33%), Gaps = 31/175 (17%)

Query: 113 PGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPP---------PP 163
           PG  P  TPA       G PP P P  P+Q       P      GP+PP         PP
Sbjct: 10  PGESPGATPA------PGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPP 63

Query: 164 AASRYGQTPGREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRT 223
            A+  G   GR     +     CGRP +    S      +G+  R     + A       
Sbjct: 64  EAADEGGPRGRLRSRDS----SCGRPGTPGAASTAKGSPNGECGRGEPQCSPAG------ 113

Query: 224 DIPSAIAAGPARTPDRHGL---PIPGSTPTPMVGSGRLGAPVGRSGGGASARSSR 275
             P   A GP  +    G    P PG  P    GS   G P G   G  ++   R
Sbjct: 114 --PEGPARGPKVSFSCRGAASGPAPGPGPAEEAGSEEAG-PAGEPRGSQASFMQR 165



 Score = 32.0 bits (71), Expect = 0.92
 Identities = 40/133 (30%), Positives = 46/133 (34%), Gaps = 22/133 (16%)

Query: 116 RPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGRE 175
           RP   PA  A S    PP   P  P  P+     P  G+        PAA   G      
Sbjct: 760 RPPPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGL--------PAAPLAG------ 805

Query: 176 PRVQAPGLGPCGRPASGRLLSL-HLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPA 234
           P + A  L    RP S    SL H   G    TR     T           P+A AA P 
Sbjct: 806 PALPARRLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRL-----GPTPAARAAAP- 859

Query: 235 RTPDRHGLPIPGS 247
            +PDR     PG+
Sbjct: 860 -SPDRRDSASPGA 871


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 51/196 (26%), Positives = 66/196 (33%), Gaps = 31/196 (15%)

Query: 109 TVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRH---KHPKKGVTGGPSPPPPAA 165
           T P P   P+G PA  A +    PPTP P  P  P       + P+       +PP P  
Sbjct: 107 TPPAPPRAPRGAPAAAAAA--APPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGP 164

Query: 166 SRYGQTPGREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDI 225
           ++ G    R   + AP   P   PA               G R+  P   AA      + 
Sbjct: 165 AQPGPRAQRAAPLAAPPPAPAAPPA----------VAPPAGPRRAPPPAVAA-----REP 209

Query: 226 PSAIAAGPARTPDRHGLPIPGSTPTPMVGSGRLGA---PVG--------RSGGGASARSS 274
           P      P   P +   P P   P P  G+ R G    PV            GGA  R +
Sbjct: 210 PLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRLT 269

Query: 275 RPSCANVLLRADASLG 290
           R     +L    A+ G
Sbjct: 270 RGRVQGLLEEEAAARG 285


>gi|4559408 colony stimulating factor 2 receptor, beta precursor
           [Homo sapiens]
          Length = 897

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 48/200 (24%), Positives = 67/200 (33%), Gaps = 24/200 (12%)

Query: 78  PWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMR-APSHKGTPPTPN 136
           PWG + P      P   G ++     + + + V  P   P  TPA    P+ +  PP+P 
Sbjct: 513 PWGSRFPELEGVFPVGFGDSEVSPLTIEDPKHVCDPPSGPDTTPAASDLPTEQ--PPSPQ 570

Query: 137 PWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLGPCGRPASGRLLS 196
           P  P       K        GP   PP +       G+    Q  G      P S   L 
Sbjct: 571 PGPPAASHTPEKQASSFDFNGPYLGPPHSRSLPDILGQPEPPQEGGSQKSPPPGSLEYLC 630

Query: 197 LHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMVGSG 256
           L                     GG    +P A A GP +  +    P  G+  +P + SG
Sbjct: 631 L-------------------PAGGQVQLVPLAQAMGPGQAVEVERRPSQGAAGSPSLESG 671

Query: 257 RLGAP--VGRSGGGASARSS 274
              AP  +G   GG   + S
Sbjct: 672 GGPAPPALGPRVGGQDQKDS 691



 Score = 32.3 bits (72), Expect = 0.71
 Identities = 39/151 (25%), Positives = 53/151 (35%), Gaps = 27/151 (17%)

Query: 49  QTTGGQAPSREISLGPWAAGTHF----LAISTTPWGRKTPACISELPTSSGTAQPLANAV 104
           ++ GG AP    +LGP   G       +AI  +    + P   S   +S+       +  
Sbjct: 669 ESGGGPAPP---ALGPRVGGQDQKDSPVAIPMSSGDTEDPGVASGYVSSADLVFTPNSGA 725

Query: 105 CEVQTVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPP-- 162
             V  VP  GL    TP++      G P  P P             K G  G    PP  
Sbjct: 726 SSVSLVPSLGLPSDQTPSLCPGLASGPPGAPGP------------VKSGFEGYVELPPIE 773

Query: 163 ---PAASRYGQTPGREPRVQAPGLGPCGRPA 190
              P + R    P   P  ++P L P  RPA
Sbjct: 774 GRSPRSPRNNPVP---PEAKSPVLNPGERPA 801


>gi|78499633 phospholipase C, eta 2 [Homo sapiens]
          Length = 1416

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 49/196 (25%), Positives = 68/196 (34%), Gaps = 30/196 (15%)

Query: 95   GTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQP-------QNRH 147
            GT    +  V +    PGPG  P+  PA   P   G+P    P   ++P       +   
Sbjct: 950  GTRDTGSKGVADDVVPPGPGPAPEA-PAQEGPG-SGSPRDTRPLSTQRPLPPLCSLETIA 1007

Query: 148  KHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGT 207
            + P  G    P PPPPAA     + GR P    PG            ++  LE  +    
Sbjct: 1008 EEPAPG----PGPPPPAAVPTSSSQGRPPYPTGPGAN----------VASPLEDTEEPRD 1053

Query: 208  RQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPI------PGSTPTPMVGSGR-LGA 260
             +  P      GG     P +   G ++      LP+       G  PT  +G  R L A
Sbjct: 1054 SRPRPCNGEGAGGAYERAPGSQTDGRSQPRTLGHLPVIRRVKSEGQVPTEPLGGWRPLAA 1113

Query: 261  PVGRSGGGASARSSRP 276
            P       + A  S P
Sbjct: 1114 PFPAPAVYSDATGSDP 1129



 Score = 34.3 bits (77), Expect = 0.19
 Identities = 50/190 (26%), Positives = 68/190 (35%), Gaps = 41/190 (21%)

Query: 21   PNTGGAAAHPTYHPMGHRPRTCILLR--GDQTTGGQAPSR----EISLGPWAAGTHFLAI 74
            P  G   +H    P      +  +LR      T  Q P R    E+ LG    G+  +A 
Sbjct: 902  PKPGSLDSHAAGRPPARPSVSQRILRRTASAPTKSQKPGRRGFPELVLGTRDTGSKGVAD 961

Query: 75   STTPWGRKTPACISELPTSSG-------------TAQPLANAVCEVQTV---PGPGLRPQ 118
               P G   P    E P   G             T +PL   +C ++T+   P PG  P 
Sbjct: 962  DVVPPG---PGPAPEAPAQEGPGSGSPRDTRPLSTQRPLP-PLCSLETIAEEPAPGPGPP 1017

Query: 119  GTPAMRAPSHKGTPPTPNPWG---------PEQPQNRHKHPKKGV-TGGPSPPPPAASRY 168
               A+   S +G PP P   G          E+P++    P  G   GG     P +   
Sbjct: 1018 PPAAVPTSSSQGRPPYPTGPGANVASPLEDTEEPRDSRPRPCNGEGAGGAYERAPGS--- 1074

Query: 169  GQTPGR-EPR 177
             QT GR +PR
Sbjct: 1075 -QTDGRSQPR 1083


>gi|87239981 tankyrase, TRF1-interacting ankyrin-related ADP-ribose
           polymerase [Homo sapiens]
          Length = 1327

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 45/157 (28%), Positives = 58/157 (36%), Gaps = 16/157 (10%)

Query: 144 QNRHKHPKKGV-----TGGPSPPPPAASRYGQTPGREP-RVQAPGLGPCGRPASGRLLSL 197
           Q+ H H ++ +        P PPPP     G  PG  P    A GL P   P  G    L
Sbjct: 8   QHHHHHHQQQLQPAPGASAPPPPPPPPLSPGLAPGTTPASPTASGLAPFASPRHG----L 63

Query: 198 HLEKGDGKGTRQRIPLTDAAVGG----DRTDIPSAIAAGPARTPDRHGLPIPGSTPTPMV 253
            L +GDG       P +   V G      T     +AA P   P        G  P P  
Sbjct: 64  ALPEGDGSRDPPDRPRSPDPVDGTSCCSTTSTICTVAAAPV-VPAVSTSSAAGVAPNP-A 121

Query: 254 GSGRLGAPVGRSGGGASARSSRPSCANVLLRADASLG 290
           GSG   +P   S   +S+ SS  S  + L  +  + G
Sbjct: 122 GSGSNNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAG 158



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 31/130 (23%), Positives = 41/130 (31%), Gaps = 14/130 (10%)

Query: 62  LGPWAAGTHFLAISTTPWGRKTP-ACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGT 120
           L P+A+  H LA+      R  P    S  P    +     + +C V   P         
Sbjct: 53  LAPFASPRHGLALPEGDGSRDPPDRPRSPDPVDGTSCCSTTSTICTVAAAPV-------V 105

Query: 121 PAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPP------PPAASRYGQTPGR 174
           PA+   S  G  P P   G     +    P    +  PS P       P A+    T   
Sbjct: 106 PAVSTSSAAGVAPNPAGSGSNNSPSSSSSPTSSSSSSPSSPGSSLAESPEAAGVSSTAPL 165

Query: 175 EPRVQAPGLG 184
            P    PG G
Sbjct: 166 GPGAAGPGTG 175


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 34/113 (30%), Positives = 46/113 (40%), Gaps = 17/113 (15%)

Query: 95   GTAQPLANAVCEVQTVPG-PGLR----PQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKH 149
            G A  L   V E    PG P +R    P+ +P +  P  +  P +  P  P+QP    +H
Sbjct: 2772 GAASTLVPGVSETSASPGSPSVRSMSGPESSPPIGGPC-EAAPSSSLPTPPQQPFIARRH 2830

Query: 150  PKKGVTGGPSP-----------PPPAASRYGQTPGREPRVQAPGLGPCGRPAS 191
             + GVTGG SP           PP    R G+ P +       G G    P+S
Sbjct: 2831 IELGVTGGGSPENGDGALLAITPPAVKRRRGRPPKKNRSPADAGRGVDEAPSS 2883



 Score = 36.6 bits (83), Expect = 0.037
 Identities = 74/285 (25%), Positives = 103/285 (36%), Gaps = 49/285 (17%)

Query: 27   AAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPWAAGTHFLAISTTPWGRKTPAC 86
            A  P  +  G +P T   ++G++ T   A  R++++G              P  R     
Sbjct: 1194 AQRPVANAGGSKPLT-FQIQGNKLTLTGAQVRQLAVG-----------QPRPLQRNVVHL 1241

Query: 87   ISELPTSSGTAQPLANAVCE-VQTVPGP---GLRPQGTPAMR-APSHKGTPPTPNPWGPE 141
            +S        +QP   A+ + V   PGP    + P  TP+   AP+    P   N   P 
Sbjct: 1242 VSAGGQHHLISQPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPT 1301

Query: 142  QPQNR-------HKHPKKGVTG----GPSPPPPAAS-------RYGQTPGREPRVQAPGL 183
               N         + P+ G+T      P+P PP++        R   TPGR P    P L
Sbjct: 1302 MVNNTGVVKIVVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLP---TPTL 1358

Query: 184  GPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLP 243
            G    P     L   L K          P   A+  G     P  I++ P   P    LP
Sbjct: 1359 GTARAPMPTPTLVRPLLKL----VHSPSPEVSASAPGAA---PLTISS-PLHVPS--SLP 1408

Query: 244  IPGSTPTPMVGSGRLGAPVGRSGGGASARSSRPSCANVLLRADAS 288
             P S+P P+  S  L +PV  S       SS P      L A AS
Sbjct: 1409 GPASSPMPIPNSSPLASPVS-STVSVPLSSSLPISVPTTLPAPAS 1452



 Score = 35.0 bits (79), Expect = 0.11
 Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 10/125 (8%)

Query: 53   GQAPSREISLGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPG 112
            G AP+  ++L P ++    LA ++      +PA +  L  ++  AQ LA A    Q+   
Sbjct: 1761 GPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAA--AQTLALAPASTQS--- 1815

Query: 113  PGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGP-SPPPPAASRYGQT 171
                P    +    S  G  P P       P ++ +     +  GP SPP  A S  G  
Sbjct: 1816 ----PASQASSLVVSASGAAPLPVTMVSRLPVSKDEPDTLTLRSGPPSPPSTATSFGGPR 1871

Query: 172  PGREP 176
            P R+P
Sbjct: 1872 PRRQP 1876


>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
          Length = 2303

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 65/271 (23%), Positives = 92/271 (33%), Gaps = 44/271 (16%)

Query: 25   GAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPWAAGTHFLAISTTPWGRKTP 84
            G +   T  P  HR       +G Q  G    +R     P   G   +  S +P     P
Sbjct: 1723 GLSVGSTLQPPKHR-------KGRQAEGEMGSARR----PEKRGAASVKTSGSPRSPAGP 1771

Query: 85   ACISELPTSSGTAQPLANAVCEVQTV-----PGPGLRPQGTPAMRAPSHKGTPP------ 133
                E P  +    P   AV   +TV     P P  +P+GTP  RA   K  PP      
Sbjct: 1772 ----EKPRGTQKTTPGVPAVLRGRTVIYVPSPAPRAQPKGTPGPRATPRKVAPPCLAQPA 1827

Query: 134  ----TPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAA---SRYGQTPGREPRVQAPGLGPC 186
                 P+P G ++ ++ H+  K       S PP +A   +R  +TP       +P   P 
Sbjct: 1828 APAKVPSP-GQQRSRSLHRPAKTSELATLSQPPRSATPPARLAKTPSSSSSQTSPASQPL 1886

Query: 187  GRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTPDRHGLPIPG 246
             R       +     G G     + P         +T   S +     + P R G     
Sbjct: 1887 PRKRPPVTQAAGALPGPGASPVPKTPARTLLAKQHKTQ-RSPVRIPFMQRPARRG----- 1940

Query: 247  STPTPMVGSGRLGAPVGRSG--GGASARSSR 275
              P P+  +     P GR+G   G  AR  R
Sbjct: 1941 --PPPLARAVPEPGPRGRAGTEAGPGARGGR 1969



 Score = 32.7 bits (73), Expect = 0.54
 Identities = 30/114 (26%), Positives = 42/114 (36%), Gaps = 13/114 (11%)

Query: 122  AMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAP 181
            A   P+H+ T   P  +  E+PQ R + P       P+ PPPA +        +P + A 
Sbjct: 1521 AAPTPTHRRTSAIPRAFTRERPQGRKEAPAPS-KAAPAAPPPART--------QPSLIAD 1571

Query: 182  GLGPCGRPASGRLLSLHLEKGDGKGT----RQRIPLTDAAVGGDRTDIPSAIAA 231
               PC   +S        E  +        R+     D   GG R   PS  AA
Sbjct: 1572 ETPPCYSLSSSASSLSEPEPSEPPAVHPRGREPAVTKDPGPGGGRDSSPSPRAA 1625


>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
          Length = 1003

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 54/205 (26%), Positives = 82/205 (40%), Gaps = 43/205 (20%)

Query: 82  KTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPA----MRAPSHKGTPPTPNP 137
           + PA + +  +    +QP+  +V  +  +P PG  P  +      + + +H   PPT + 
Sbjct: 390 RAPAPVPQPFSLPEPSQPILPSVLSLLGLPTPG--PSHSDGSFNLLGSDAHLPPPPTLSS 447

Query: 138 WGPEQPQNRHKHPKKGVTGGP------SPPPPAASRYGQTPGREPRVQAPGLGPCGRPAS 191
             P QP++  +    G T G       +P PPAAS+    P   P +Q+P          
Sbjct: 448 GSPPQPRHPIQPSLPGTTSGSLSSVPGAPAPPAASKAPVVP--SPVLQSP---------- 495

Query: 192 GRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPS---AIAAGPARTPDRHG-LPIPGS 247
                    +G G G     PL   A GG+    PS    +A   A  P   G LP+P S
Sbjct: 496 --------SEGLGMGAGPACPLPPLA-GGEAFPFPSPEQGLALSGAGFPGMLGALPLPLS 546

Query: 248 ----TPTPMVGSGRLGAPVGRSGGG 268
                P+P++     G   G  GGG
Sbjct: 547 LGQPPPSPLLNHSLFGVLTG--GGG 569



 Score = 35.0 bits (79), Expect = 0.11
 Identities = 54/196 (27%), Positives = 67/196 (34%), Gaps = 26/196 (13%)

Query: 111 PGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPP---PPAASR 167
           PGP   P   P  R P        P    PE P      P     GG  PP    P  S 
Sbjct: 140 PGP---PSARPPCRVPPTTPLNGGPGSLPPEPPSVSQAFPTLAGPGGLFPPRLADPVPSG 196

Query: 168 YGQTPGREPRVQAPGLGPCGRPASGRLLSLHLEKGD-GKGTRQRI-------PLTDAAVG 219
              +P   PR  AP   P   PA    +SL+    + G   R  +       P    A  
Sbjct: 197 GSSSPRFLPRGNAPSPAPPPPPA----ISLNAPSYNWGAALRSSLVPSDLGSPPAPHASS 252

Query: 220 GDRTDIP---SAIAAGPARTPDRHGLPI-PGSTPTPMVGSGRLGAP--VGRSGGGASAR- 272
              +D P    + A  P   P  + LP  PG    P V S  +  P  +G  GG  +   
Sbjct: 253 SPPSDPPLFHCSDALTPPPLPPSNNLPAHPGPASQPPVSSATMHLPLVLGPLGGAPTVEG 312

Query: 273 -SSRPSCANVLLRADA 287
             + P  A+ LL A A
Sbjct: 313 PGAPPFLASSLLSAAA 328


>gi|148762978 similar to CG15216-PA [Homo sapiens]
          Length = 976

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 38/132 (28%), Positives = 48/132 (36%), Gaps = 19/132 (14%)

Query: 62  LGPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTP 121
           L P       LA    P G    +   EL  +    +P    +  V    GPG  P GTP
Sbjct: 775 LSPTYLSLRELATHAAPLG----SYARELAAAGRLYEPAECFLLSVSVAVGPGTAPPGTP 830

Query: 122 AMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGV-TGGPSPPPPAASRYGQTPGREPRVQA 180
           A+ AP+ +   PT             K  K  +  G P+ PPPA SR    P  E  +  
Sbjct: 831 ALPAPAPRSHGPTV-----------RKFAKVALAAGSPARPPPARSR---EPDMETLILT 876

Query: 181 PGLGPCGRPASG 192
           P  G  G    G
Sbjct: 877 PPPGTAGLDQDG 888



 Score = 28.9 bits (63), Expect = 7.8
 Identities = 38/148 (25%), Positives = 51/148 (34%), Gaps = 26/148 (17%)

Query: 113 PGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKK--GVTGGPSPPPPAASRYGQ 170
           P L  +G  A RA   + +P     +   +      HP K     GGP    P  +  G+
Sbjct: 111 PVLPRRGREAQRAARAEASPRREPAYPALRALANELHPIKLQPQRGGPGRVAPLCAAAGR 170

Query: 171 TPGREPRVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIA 230
               EP        P G PA      L ++  D         +   A  G R+  P+  A
Sbjct: 171 CAPPEP--------PAG-PAPHVRCRLDIKPDDA--------VLQHATRGSRSCGPTEAA 213

Query: 231 AGPARTPDRHGLPIPG-------STPTP 251
                 P  HGL +PG        TPTP
Sbjct: 214 HWARPAPQFHGLTVPGPRHMALSRTPTP 241


>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
          Length = 1464

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 79/297 (26%), Positives = 97/297 (32%), Gaps = 54/297 (18%)

Query: 16  GQPGHPNTGGAAAH------PTYHPMGHRPRTCILLRGDQTTGGQAPSREISLG-----P 64
           G+PG P   GA         P        P        D  TG   P            P
Sbjct: 287 GEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFP 346

Query: 65  WAAGTHFLAISTTPWGRKTPACISELPTS---SGTAQPLANAVCEVQTVPGPGLRPQGTP 121
            A G    A    P G + P  +   P     +G A P  N        PG   +P    
Sbjct: 347 GAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGN--------PGADGQPGAKG 398

Query: 122 AMRAPSHKGTPPTPNPWGPEQPQNRHKHP-------------KKGVTGGPSPPPPAASRY 168
           A  AP   G P  P   GP  PQ     P              KG TG    P P   + 
Sbjct: 399 ANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQG 458

Query: 169 GQTP-GREPRVQAPG-LGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVG--GDRTD 224
              P G E +  A G  GP G P          E+G G G+R   P  D   G  G   +
Sbjct: 459 PPGPAGEEGKRGARGEPGPTGLPGPPG------ERG-GPGSR-GFPGADGVAGPKGPAGE 510

Query: 225 IPSAIAAGPARTPDRHGLP----IPGSTPTPMVGSGRLGAPVGRSG-GGASARSSRP 276
             S   AGP  +P   G P    +PG+    + GS     P G++G  G + +  RP
Sbjct: 511 RGSPGPAGPKGSPGEAGRPGEAGLPGA--KGLTGSPGSPGPDGKTGPPGPAGQDGRP 565



 Score = 40.4 bits (93), Expect = 0.003
 Identities = 78/286 (27%), Positives = 99/286 (34%), Gaps = 50/286 (17%)

Query: 8   PPCRGGCWGQPGHPNT-GGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPWA 66
           PP   G  G+PG P + G   A     P+G        ++G     G+   R     P  
Sbjct: 426 PPGPKGNSGEPGAPGSKGDTGAKGEPGPVG--------VQGPPGPAGEEGKRGARGEPGP 477

Query: 67  AGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRA- 125
            G         P G +        P + G A P   A    +  PGP   P+G+P     
Sbjct: 478 TGL------PGPPGERGGPGSRGFPGADGVAGPKGPA--GERGSPGPA-GPKGSPGEAGR 528

Query: 126 ------PSHKG---TPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQT----- 171
                 P  KG   +P +P P G   P         G  G P PP P  +R GQ      
Sbjct: 529 PGEAGLPGAKGLTGSPGSPGPDGKTGPPG-----PAGQDGRPGPPGPPGAR-GQAGVMGF 582

Query: 172 PGREPRVQAPG-LGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIA 230
           PG +     PG  G  G P  G   ++     DG+   Q  P   A   G+R +      
Sbjct: 583 PGPKGAAGEPGKAGERGVP--GPPGAVGPAGKDGEAGAQGPP-GPAGPAGERGE------ 633

Query: 231 AGPARTPDRHGLPIPGSTPTPMVGSGRLGAPVGRSGGGAS-ARSSR 275
            GPA +P   GLP P   P      G  G P      G S AR  R
Sbjct: 634 QGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGER 679



 Score = 34.3 bits (77), Expect = 0.19
 Identities = 57/203 (28%), Positives = 66/203 (32%), Gaps = 38/203 (18%)

Query: 111  PGPGLRP--QGTPAMRAPSHKGTPPTP-NPWGPEQPQNRHKHP-KKGVTGGPSPP----- 161
            PG   +P  +G P          PP P  P GP  P      P  KG  G   PP     
Sbjct: 817  PGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGF 876

Query: 162  PPAASRYGQTPGREPRVQAPG-LGPCGRPA----------SGRLLSLHLEKGDGKGTRQR 210
            P AA R G  PG       PG  GP G+            +GR   +      G    + 
Sbjct: 877  PGAAGRVG-PPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKG 935

Query: 211  IPLTDAAVGGDRTDIPSAIAAG------PARTPDR--HGLPIPGSTPTPMVGSGRLG--- 259
             P  D   G   T  P  IA        P +  +R   GLP P   P     SG  G   
Sbjct: 936  SPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERG 995

Query: 260  --APVGRSG----GGASARSSRP 276
               P+G  G     G S R   P
Sbjct: 996  PPGPMGPPGLAGPPGESGREGAP 1018



 Score = 33.9 bits (76), Expect = 0.24
 Identities = 44/181 (24%), Positives = 60/181 (33%), Gaps = 35/181 (19%)

Query: 109 TVPGPGLRPQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRY 168
           +VPGP + P G   +  P     P  P P G + P      P      GP  PP    + 
Sbjct: 176 SVPGP-MGPSGPRGLPGP-----PGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKN 229

Query: 169 GQ-----TPGREPRVQAPG-LGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDR 222
           G       PGR      PG  G  G P +  L  +   +G             + + G +
Sbjct: 230 GDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRG------------FSGLDGAK 277

Query: 223 TDIPSAIAAGPARTPDRHGLP-------IPGSTPTPMVGSGRLGAPVGRSGGGASARSSR 275
            D   A   G   +P  +G P       +PG    P    G  G    R   GA+  +  
Sbjct: 278 GDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRP----GAPGPAGARGNDGATGAAGP 333

Query: 276 P 276
           P
Sbjct: 334 P 334



 Score = 33.9 bits (76), Expect = 0.24
 Identities = 69/269 (25%), Positives = 78/269 (28%), Gaps = 35/269 (13%)

Query: 9   PCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPWAAG 68
           P   G  G  G P   G+   P    M    R    L G +   G A  +     P   G
Sbjct: 703 PGNDGAKGDAGAPGAPGSQGAPGLQGMPGE-RGAAGLPGPKGDRGDAGPKGADGSPGKDG 761

Query: 69  THFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSH 128
              L   T P G   PA     P   G + P   A        GP      T A  AP  
Sbjct: 762 VRGL---TGPIGPPGPA---GAPGDKGESGPSGPA--------GP------TGARGAPGD 801

Query: 129 KGTPPTPNPWG-------PEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQAP 181
           +G P  P P G         QP  + +    G  G   PP PA       PG    V AP
Sbjct: 802 RGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGP--AGPPGPIGNVGAP 859

Query: 182 GL----GPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPARTP 237
           G     G  G P +          G    +    P       G           GPA  P
Sbjct: 860 GAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRP 919

Query: 238 DRHGLPIPGSTPTPMVGSGRLGAPVGRSG 266
              G P P   P    GS     P G  G
Sbjct: 920 GEVGPPGPPG-PAGEKGSPGADGPAGAPG 947



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 5/79 (6%)

Query: 117  PQGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHP-KKGVTGGPSP--PPPAASRYGQTPG 173
            P G P   +P  +G      P GP  P      P K G+ G P P  PP    R G    
Sbjct: 1119 PPGPPG--SPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGP 1176

Query: 174  REPRVQAPGLGPCGRPASG 192
              P       GP G P++G
Sbjct: 1177 VGPPGPPGPPGPPGPPSAG 1195



 Score = 29.6 bits (65), Expect = 4.6
 Identities = 44/166 (26%), Positives = 56/166 (33%), Gaps = 36/166 (21%)

Query: 118 QGTPAMRAPSHKGTPPTPNPWGPEQPQNRHKHP-KKGVTGGPSPPPPAASRYGQTPGREP 176
           Q T  +  P  KG      P GP  P  R   P + G+ G P PP P        PG   
Sbjct: 105 QETTGVEGP--KGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGP--------PG--- 151

Query: 177 RVQAPGLGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPART 236
               PGLG    P     LS   ++    G     P+  +   G           GP   
Sbjct: 152 ---PPGLGGNFAPQ----LSYGYDEKSTGGISVPGPMGPSGPRG---------LPGPPGA 195

Query: 237 PDRHGLPIPGSTPTPMVGSGRLG-----APVGRSG-GGASARSSRP 276
           P   G   P   P     SG +G      P G++G  G + +  RP
Sbjct: 196 PGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRP 241


>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
          Length = 1838

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 73/274 (26%), Positives = 92/274 (33%), Gaps = 41/274 (14%)

Query: 13   GCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPWAAGTHFL 72
            G  G PG     G    P Y P    P+  I   G     G+   R     P   G    
Sbjct: 856  GPLGPPGEKGKLGVPGLPGY-PGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRG- 913

Query: 73   AISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQGTPAMRAPSH-KGT 131
               T P G + P  I+  P   G +                G  P G P  R P+  +G 
Sbjct: 914  --PTGPRGERGPRGITGKPGPKGNSG---------------GDGPAGPPGERGPNGPQGP 956

Query: 132  PPTPNPWGPEQPQNRHKHP----KKGVTG-----GPSPPPPAASRYGQTPGREPRVQAPG 182
               P P GP  P  +   P    ++G TG     GP  PP      G T    P  +   
Sbjct: 957  TGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGH 1016

Query: 183  LGPCGRPASGRLLSLHLEKG-DGKGTRQRIPLTDAAVG-----GDRTDIPSAIAA-GPAR 235
             GP G P    L  L  ++G  G      +P  D   G     GDR  +P  + A G   
Sbjct: 1017 PGPPGPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDR-GLPGPVGALGLKG 1075

Query: 236  TPDRHGLPIPGSTP---TPMVGSGRLGAPVGRSG 266
                 G P P  +P    P   +G +G P GR G
Sbjct: 1076 NEGPPGPPGPAGSPGERGPAGAAGPIGIP-GRPG 1108



 Score = 34.3 bits (77), Expect = 0.19
 Identities = 50/190 (26%), Positives = 61/190 (32%), Gaps = 45/190 (23%)

Query: 6    QKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQTTGGQAPSREISLGPW 65
            Q P    G  G+ GHP   G                     G+Q   G A        P 
Sbjct: 1002 QGPTGETGPMGERGHPGPPGPP-------------------GEQGLPGLAGKEGTKGDPG 1042

Query: 66   AAGTHFLAISTTPWGRKTPACISELPTSSGTAQPL-ANAVCEVQTVPGPGLRPQGTPAMR 124
             AG           G+  P  +   P   G   P+ A  +   +  PGP   P G+P  R
Sbjct: 1043 PAGLP---------GKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPP-GPAGSPGER 1092

Query: 125  APSHK----GTPPTPNPWGPEQPQNRHKHPKKGVTGGPSPPPPAASRYGQTPGREPRVQA 180
             P+      G P  P P GP  P       +KG  G   P  PA        G +  V  
Sbjct: 1093 GPAGAAGPIGIPGRPGPQGPPGPAG-----EKGAPGEKGPQGPAG-----RDGLQGPVGL 1142

Query: 181  PG-LGPCGRP 189
            PG  GP G P
Sbjct: 1143 PGPAGPVGPP 1152



 Score = 33.5 bits (75), Expect = 0.32
 Identities = 68/276 (24%), Positives = 85/276 (30%), Gaps = 41/276 (14%)

Query: 5    DQKPPCRGGCWGQPGHPNTGGAAAHPTYHPMGHRPRTCILLRGDQ-TTGGQAPSREISL- 62
            +Q PP   G  G  G P   GA   P   P G   +     +GD+   G   P   + L 
Sbjct: 1175 EQGPPGPTGPQGPIGQPGPSGADGEP--GPRGQ--QGLFGQKGDEGPRGFPGPPGPVGLQ 1230

Query: 63   ----GPWAAGTHFLAISTTPWGRKTPACISELPTSSGTAQPLANAVCEVQTVPGPGLRPQ 118
                 P   G         P G   P   S  P + G   P           PG    P 
Sbjct: 1231 GLPGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGP-----------PGGIGNPG 1279

Query: 119  GTPAMRAPSHKGTPPTPNPWGPEQPQ-NRHKHPKKGVTGGPSPPPPAASRYGQTPGREP- 176
                   P   G P  P   GP  P+  R +  + G +G   PP P        P   P 
Sbjct: 1280 AVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPG 1339

Query: 177  RVQAPG-LGPCGRPASGRLLSLHLEKGDGKGTRQRIPLTDAAVGGDRTDIPSAIAAGPAR 235
             V  PG  GP G P          +KGD           D   G   +  P+    GP+ 
Sbjct: 1340 PVGFPGDPGPPGEPGPAGQDGPPGDKGD-----------DGEPGQTGSPGPTG-EPGPSG 1387

Query: 236  TPDRHGLPIPGST-----PTPMVGSGRLGAPVGRSG 266
             P + G P P             G   L  P G++G
Sbjct: 1388 PPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTG 1423


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.134    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,207,186
Number of Sequences: 37866
Number of extensions: 1466435
Number of successful extensions: 10251
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 1003
Number of HSP's that attempted gapping in prelim test: 6882
Number of HSP's gapped (non-prelim): 3373
length of query: 373
length of database: 18,247,518
effective HSP length: 104
effective length of query: 269
effective length of database: 14,309,454
effective search space: 3849243126
effective search space used: 3849243126
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.