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Search of human proteins with 239756410
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756410 PREDICTED: similar to dynamin 1, partial [Homo
sapiens]
(191 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756410 PREDICTED: similar to dynamin 1, partial [Homo sapi... 377 e-105
gi|239756412 PREDICTED: similar to dynamin 1, partial [Homo sapi... 328 1e-90
gi|239745346 PREDICTED: hypothetical protein XP_002343442, parti... 110 7e-25
gi|56549117 dynamin 1 isoform 2 [Homo sapiens] 58 4e-09
gi|59853099 dynamin 1 isoform 1 [Homo sapiens] 58 4e-09
gi|42544243 dynamin 3 isoform a [Homo sapiens] 47 1e-05
gi|209915561 dynamin 3 isoform b [Homo sapiens] 47 1e-05
gi|56549125 dynamin 2 isoform 4 [Homo sapiens] 43 2e-04
gi|56549123 dynamin 2 isoform 2 [Homo sapiens] 43 2e-04
gi|56549121 dynamin 2 isoform 1 [Homo sapiens] 43 2e-04
gi|56549119 dynamin 2 isoform 3 [Homo sapiens] 43 2e-04
gi|239756350 PREDICTED: UPF0621 protein C-like [Homo sapiens] 40 0.001
gi|239750876 PREDICTED: UPF0621 protein C-like [Homo sapiens] 40 0.001
gi|169208224 PREDICTED: UPF0621 protein C-like [Homo sapiens] 40 0.001
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 36 0.023
gi|148746195 trichohyalin [Homo sapiens] 35 0.051
gi|88196790 coiled-coil domain containing 88 [Homo sapiens] 33 0.11
gi|113425405 PREDICTED: similar to dynamin 1 [Homo sapiens] 32 0.25
gi|239745286 PREDICTED: hypothetical protein XP_002343417 [Homo ... 32 0.25
gi|239745270 PREDICTED: hypothetical protein XP_002343416 [Homo ... 32 0.25
gi|239745262 PREDICTED: hypothetical protein XP_002343372 [Homo ... 32 0.25
gi|30039694 zinc finger protein 598 [Homo sapiens] 32 0.25
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 32 0.43
gi|239743315 PREDICTED: hypothetical protein XP_002342820 [Homo ... 31 0.74
gi|239508997 PREDICTED: hypothetical protein [Homo sapiens] 31 0.74
gi|62988361 absent in melanoma 1 [Homo sapiens] 30 0.97
gi|4557779 myocilin [Homo sapiens] 30 1.3
gi|239787787 kin of IRRE like 3 isoform 2 [Homo sapiens] 30 1.3
gi|26006461 kin of IRRE like 3 isoform 1 [Homo sapiens] 30 1.3
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 30 1.3
>gi|239756410 PREDICTED: similar to dynamin 1, partial [Homo
sapiens]
Length = 191
Score = 377 bits (969), Expect = e-105
Identities = 191/191 (100%), Positives = 191/191 (100%)
Query: 1 RQTKEFIFSELLSNLYSRGNEKTLVEASAEQADQGVHLLRAAVQPALAWEREDTRGGVGR 60
RQTKEFIFSELLSNLYSRGNEKTLVEASAEQADQGVHLLRAAVQPALAWEREDTRGGVGR
Sbjct: 1 RQTKEFIFSELLSNLYSRGNEKTLVEASAEQADQGVHLLRAAVQPALAWEREDTRGGVGR 60
Query: 61 AGRPRSSSSQSCYPTCTRVGTRRHSWRRRQSRQTKEFIFSELLSNLHSRGNEKTLVEESA 120
AGRPRSSSSQSCYPTCTRVGTRRHSWRRRQSRQTKEFIFSELLSNLHSRGNEKTLVEESA
Sbjct: 61 AGRPRSSSSQSCYPTCTRVGTRRHSWRRRQSRQTKEFIFSELLSNLHSRGNEKTLVEESA 120
Query: 121 EQAQRRDETRVGRRRHSWRSRQSRQNKEFIFSELLSNLYSRGNEKTLLEESAEQADQGVH 180
EQAQRRDETRVGRRRHSWRSRQSRQNKEFIFSELLSNLYSRGNEKTLLEESAEQADQGVH
Sbjct: 121 EQAQRRDETRVGRRRHSWRSRQSRQNKEFIFSELLSNLYSRGNEKTLLEESAEQADQGVH 180
Query: 181 LLRAAVQPALA 191
LLRAAVQPALA
Sbjct: 181 LLRAAVQPALA 191
>gi|239756412 PREDICTED: similar to dynamin 1, partial [Homo
sapiens]
Length = 350
Score = 328 bits (842), Expect = 1e-90
Identities = 172/193 (89%), Positives = 178/193 (92%), Gaps = 2/193 (1%)
Query: 1 RQTKEFIFSELLSNLYSRGNEKTLVEASAEQADQGVHLLRAAVQPALAWEREDTRGGVGR 60
RQTKEFIFSELL NL+SRGNEKTLVEASAEQADQGVHLLRAAVQPALAWEREDTRGGV R
Sbjct: 1 RQTKEFIFSELLCNLHSRGNEKTLVEASAEQADQGVHLLRAAVQPALAWEREDTRGGVSR 60
Query: 61 AGRPRSSSSQSCYPTCTRVGTRRHSWRRRQSRQTKEFIFSELLSNLHSRGNEKTLVEESA 120
GRPRSSSSQSC PTCTRVGTRRHSWRRRQSRQTKEFIFSELLS LH RGNEKTL+EESA
Sbjct: 61 EGRPRSSSSQSCCPTCTRVGTRRHSWRRRQSRQTKEFIFSELLSKLHLRGNEKTLMEESA 120
Query: 121 EQAQRRDETRVGRRRHSWRSRQSRQNKEFIFSELLSNLYSRGNEKTLLEESAEQADQ--G 178
EQAQR DETRVGRRRHSWRSRQSRQ KEFIFSELLSNLYSR N +TL+EESAEQA +
Sbjct: 121 EQAQRCDETRVGRRRHSWRSRQSRQTKEFIFSELLSNLYSRRNLQTLVEESAEQAQRCDE 180
Query: 179 VHLLRAAVQPALA 191
+ LLRAAVQPALA
Sbjct: 181 MLLLRAAVQPALA 193
Score = 317 bits (813), Expect = 3e-87
Identities = 170/195 (87%), Positives = 178/195 (91%), Gaps = 4/195 (2%)
Query: 1 RQTKEFIFSELLSNLYSRGNEKTLVEASAEQADQ--GVHLLRAAVQPALAWEREDTRGGV 58
RQTKEFIFSELLSNLYSR N +TLVE SAEQA + + LLRAAVQPALAWEREDTRGGV
Sbjct: 144 RQTKEFIFSELLSNLYSRRNLQTLVEESAEQAQRCDEMLLLRAAVQPALAWEREDTRGGV 203
Query: 59 GRAGRPRSSSSQSCYPTCTRVGTRRHSWRRRQSRQTKEFIFSELLSNLHSRGNEKTLVEE 118
GRAGRPRSSSSQSC PTCTRVGTRRHSWRRRQSRQTKEFIFSELLSNLHSRGNEKTL+EE
Sbjct: 204 GRAGRPRSSSSQSCCPTCTRVGTRRHSWRRRQSRQTKEFIFSELLSNLHSRGNEKTLMEE 263
Query: 119 SAEQAQRRDETRVGRRRHSWRSRQSRQNKEFIFSELLSNLYSRGNEKTLLEESAEQADQ- 177
SAEQAQRRDETRVGRRRHSWRSRQSRQ KEFIFSELLSNLYSR N +TL+EESAEQA +
Sbjct: 264 SAEQAQRRDETRVGRRRHSWRSRQSRQTKEFIFSELLSNLYSRRNLQTLVEESAEQAQRC 323
Query: 178 -GVHLLRAAVQPALA 191
+ LLRAAVQPALA
Sbjct: 324 DEMLLLRAAVQPALA 338
Score = 90.9 bits (224), Expect = 6e-19
Identities = 50/62 (80%), Positives = 53/62 (85%), Gaps = 2/62 (3%)
Query: 1 RQTKEFIFSELLSNLYSRGNEKTLVEASAEQADQ--GVHLLRAAVQPALAWEREDTRGGV 58
RQTKEFIFSELLSNLYSR N +TLVE SAEQA + + LLRAAVQPALAWE EDTRGGV
Sbjct: 289 RQTKEFIFSELLSNLYSRRNLQTLVEESAEQAQRCDEMLLLRAAVQPALAWEPEDTRGGV 348
Query: 59 GR 60
GR
Sbjct: 349 GR 350
>gi|239745346 PREDICTED: hypothetical protein XP_002343442,
partial [Homo sapiens]
Length = 56
Score = 110 bits (275), Expect = 7e-25
Identities = 55/56 (98%), Positives = 56/56 (100%)
Query: 1 RQTKEFIFSELLSNLYSRGNEKTLVEASAEQADQGVHLLRAAVQPALAWEREDTRG 56
RQTKEFIFSELLSNL+SRGNEKTLVEASAEQADQGVHLLRAAVQPALAWEREDTRG
Sbjct: 1 RQTKEFIFSELLSNLHSRGNEKTLVEASAEQADQGVHLLRAAVQPALAWEREDTRG 56
Score = 87.0 bits (214), Expect = 9e-18
Identities = 44/48 (91%), Positives = 46/48 (95%)
Query: 144 RQNKEFIFSELLSNLYSRGNEKTLLEESAEQADQGVHLLRAAVQPALA 191
RQ KEFIFSELLSNL+SRGNEKTL+E SAEQADQGVHLLRAAVQPALA
Sbjct: 1 RQTKEFIFSELLSNLHSRGNEKTLVEASAEQADQGVHLLRAAVQPALA 48
>gi|56549117 dynamin 1 isoform 2 [Homo sapiens]
Length = 851
Score = 58.2 bits (139), Expect = 4e-09
Identities = 28/35 (80%), Positives = 33/35 (94%)
Query: 94 TKEFIFSELLSNLHSRGNEKTLVEESAEQAQRRDE 128
TKEFIFSELL+NL+S G++ TL+EESAEQAQRRDE
Sbjct: 693 TKEFIFSELLANLYSCGDQNTLMEESAEQAQRRDE 727
Score = 51.2 bits (121), Expect = 5e-07
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 147 KEFIFSELLSNLYSRGNEKTLLEESAEQADQGVHLLR 183
KEFIFSELL+NLYS G++ TL+EESAEQA + +LR
Sbjct: 694 KEFIFSELLANLYSCGDQNTLMEESAEQAQRRDEMLR 730
Score = 50.4 bits (119), Expect = 9e-07
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 3 TKEFIFSELLSNLYSRGNEKTLVEASAEQADQGVHLLR 40
TKEFIFSELL+NLYS G++ TL+E SAEQA + +LR
Sbjct: 693 TKEFIFSELLANLYSCGDQNTLMEESAEQAQRRDEMLR 730
>gi|59853099 dynamin 1 isoform 1 [Homo sapiens]
Length = 864
Score = 58.2 bits (139), Expect = 4e-09
Identities = 28/35 (80%), Positives = 33/35 (94%)
Query: 94 TKEFIFSELLSNLHSRGNEKTLVEESAEQAQRRDE 128
TKEFIFSELL+NL+S G++ TL+EESAEQAQRRDE
Sbjct: 693 TKEFIFSELLANLYSCGDQNTLMEESAEQAQRRDE 727
Score = 51.2 bits (121), Expect = 5e-07
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 147 KEFIFSELLSNLYSRGNEKTLLEESAEQADQGVHLLR 183
KEFIFSELL+NLYS G++ TL+EESAEQA + +LR
Sbjct: 694 KEFIFSELLANLYSCGDQNTLMEESAEQAQRRDEMLR 730
Score = 50.4 bits (119), Expect = 9e-07
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 3 TKEFIFSELLSNLYSRGNEKTLVEASAEQADQGVHLLR 40
TKEFIFSELL+NLYS G++ TL+E SAEQA + +LR
Sbjct: 693 TKEFIFSELLANLYSCGDQNTLMEESAEQAQRRDEMLR 730
>gi|42544243 dynamin 3 isoform a [Homo sapiens]
Length = 863
Score = 47.0 bits (110), Expect = 1e-05
Identities = 23/34 (67%), Positives = 29/34 (85%)
Query: 95 KEFIFSELLSNLHSRGNEKTLVEESAEQAQRRDE 128
K+FI SELL+ L+S ++ TL+EESAEQAQRRDE
Sbjct: 688 KDFINSELLAQLYSSEDQNTLMEESAEQAQRRDE 721
Score = 42.0 bits (97), Expect = 3e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 147 KEFIFSELLSNLYSRGNEKTLLEESAEQADQGVHLLR 183
K+FI SELL+ LYS ++ TL+EESAEQA + +LR
Sbjct: 688 KDFINSELLAQLYSSEDQNTLMEESAEQAQRRDEMLR 724
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 4 KEFIFSELLSNLYSRGNEKTLVEASAEQADQGVHLLR 40
K+FI SELL+ LYS ++ TL+E SAEQA + +LR
Sbjct: 688 KDFINSELLAQLYSSEDQNTLMEESAEQAQRRDEMLR 724
>gi|209915561 dynamin 3 isoform b [Homo sapiens]
Length = 859
Score = 47.0 bits (110), Expect = 1e-05
Identities = 23/34 (67%), Positives = 29/34 (85%)
Query: 95 KEFIFSELLSNLHSRGNEKTLVEESAEQAQRRDE 128
K+FI SELL+ L+S ++ TL+EESAEQAQRRDE
Sbjct: 684 KDFINSELLAQLYSSEDQNTLMEESAEQAQRRDE 717
Score = 42.0 bits (97), Expect = 3e-04
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 147 KEFIFSELLSNLYSRGNEKTLLEESAEQADQGVHLLR 183
K+FI SELL+ LYS ++ TL+EESAEQA + +LR
Sbjct: 684 KDFINSELLAQLYSSEDQNTLMEESAEQAQRRDEMLR 720
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 4 KEFIFSELLSNLYSRGNEKTLVEASAEQADQGVHLLR 40
K+FI SELL+ LYS ++ TL+E SAEQA + +LR
Sbjct: 684 KDFINSELLAQLYSSEDQNTLMEESAEQAQRRDEMLR 720
>gi|56549125 dynamin 2 isoform 4 [Homo sapiens]
Length = 866
Score = 42.7 bits (99), Expect = 2e-04
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 94 TKEFIFSELLSNLHSRGNEKTLVEESAEQAQRRDE 128
TK FI ELL+ L+S ++ +L+EESA+QAQRRD+
Sbjct: 683 TKAFIHHELLAYLYSSADQSSLMEESADQAQRRDD 717
Score = 36.6 bits (83), Expect = 0.014
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 147 KEFIFSELLSNLYSRGNEKTLLEESAEQADQGVHLLR 183
K FI ELL+ LYS ++ +L+EESA+QA + +LR
Sbjct: 684 KAFIHHELLAYLYSSADQSSLMEESADQAQRRDDMLR 720
Score = 35.8 bits (81), Expect = 0.023
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 3 TKEFIFSELLSNLYSRGNEKTLVEASAEQADQGVHLLR 40
TK FI ELL+ LYS ++ +L+E SA+QA + +LR
Sbjct: 683 TKAFIHHELLAYLYSSADQSSLMEESADQAQRRDDMLR 720
>gi|56549123 dynamin 2 isoform 2 [Homo sapiens]
Length = 870
Score = 42.7 bits (99), Expect = 2e-04
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 94 TKEFIFSELLSNLHSRGNEKTLVEESAEQAQRRDE 128
TK FI ELL+ L+S ++ +L+EESA+QAQRRD+
Sbjct: 687 TKAFIHHELLAYLYSSADQSSLMEESADQAQRRDD 721
Score = 36.6 bits (83), Expect = 0.014
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 147 KEFIFSELLSNLYSRGNEKTLLEESAEQADQGVHLLR 183
K FI ELL+ LYS ++ +L+EESA+QA + +LR
Sbjct: 688 KAFIHHELLAYLYSSADQSSLMEESADQAQRRDDMLR 724
Score = 35.8 bits (81), Expect = 0.023
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 3 TKEFIFSELLSNLYSRGNEKTLVEASAEQADQGVHLLR 40
TK FI ELL+ LYS ++ +L+E SA+QA + +LR
Sbjct: 687 TKAFIHHELLAYLYSSADQSSLMEESADQAQRRDDMLR 724
>gi|56549121 dynamin 2 isoform 1 [Homo sapiens]
Length = 870
Score = 42.7 bits (99), Expect = 2e-04
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 94 TKEFIFSELLSNLHSRGNEKTLVEESAEQAQRRDE 128
TK FI ELL+ L+S ++ +L+EESA+QAQRRD+
Sbjct: 687 TKAFIHHELLAYLYSSADQSSLMEESADQAQRRDD 721
Score = 36.6 bits (83), Expect = 0.014
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 147 KEFIFSELLSNLYSRGNEKTLLEESAEQADQGVHLLR 183
K FI ELL+ LYS ++ +L+EESA+QA + +LR
Sbjct: 688 KAFIHHELLAYLYSSADQSSLMEESADQAQRRDDMLR 724
Score = 35.8 bits (81), Expect = 0.023
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 3 TKEFIFSELLSNLYSRGNEKTLVEASAEQADQGVHLLR 40
TK FI ELL+ LYS ++ +L+E SA+QA + +LR
Sbjct: 687 TKAFIHHELLAYLYSSADQSSLMEESADQAQRRDDMLR 724
>gi|56549119 dynamin 2 isoform 3 [Homo sapiens]
Length = 866
Score = 42.7 bits (99), Expect = 2e-04
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 94 TKEFIFSELLSNLHSRGNEKTLVEESAEQAQRRDE 128
TK FI ELL+ L+S ++ +L+EESA+QAQRRD+
Sbjct: 683 TKAFIHHELLAYLYSSADQSSLMEESADQAQRRDD 717
Score = 36.6 bits (83), Expect = 0.014
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 147 KEFIFSELLSNLYSRGNEKTLLEESAEQADQGVHLLR 183
K FI ELL+ LYS ++ +L+EESA+QA + +LR
Sbjct: 684 KAFIHHELLAYLYSSADQSSLMEESADQAQRRDDMLR 720
Score = 35.8 bits (81), Expect = 0.023
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 3 TKEFIFSELLSNLYSRGNEKTLVEASAEQADQGVHLLR 40
TK FI ELL+ LYS ++ +L+E SA+QA + +LR
Sbjct: 683 TKAFIHHELLAYLYSSADQSSLMEESADQAQRRDDMLR 720
>gi|239756350 PREDICTED: UPF0621 protein C-like [Homo sapiens]
Length = 135
Score = 40.4 bits (93), Expect = 0.001
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 96 EFIFSELLSNLHSRGNEKTLVEESAEQAQRRDET 129
EFIFSELL+ L+S G+E L+E+S EQA+ +ET
Sbjct: 72 EFIFSELLAKLYSCGDENMLMEDSTEQAKWCNET 105
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 148 EFIFSELLSNLYSRGNEKTLLEESAEQA 175
EFIFSELL+ LYS G+E L+E+S EQA
Sbjct: 72 EFIFSELLAKLYSCGDENMLMEDSTEQA 99
Score = 38.5 bits (88), Expect = 0.004
Identities = 19/28 (67%), Positives = 22/28 (78%)
Query: 5 EFIFSELLSNLYSRGNEKTLVEASAEQA 32
EFIFSELL+ LYS G+E L+E S EQA
Sbjct: 72 EFIFSELLAKLYSCGDENMLMEDSTEQA 99
>gi|239750876 PREDICTED: UPF0621 protein C-like [Homo sapiens]
Length = 135
Score = 40.4 bits (93), Expect = 0.001
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 96 EFIFSELLSNLHSRGNEKTLVEESAEQAQRRDET 129
EFIFSELL+ L+S G+E L+E+S EQA+ +ET
Sbjct: 72 EFIFSELLAKLYSCGDENMLMEDSTEQAKWCNET 105
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 148 EFIFSELLSNLYSRGNEKTLLEESAEQA 175
EFIFSELL+ LYS G+E L+E+S EQA
Sbjct: 72 EFIFSELLAKLYSCGDENMLMEDSTEQA 99
Score = 38.5 bits (88), Expect = 0.004
Identities = 19/28 (67%), Positives = 22/28 (78%)
Query: 5 EFIFSELLSNLYSRGNEKTLVEASAEQA 32
EFIFSELL+ LYS G+E L+E S EQA
Sbjct: 72 EFIFSELLAKLYSCGDENMLMEDSTEQA 99
>gi|169208224 PREDICTED: UPF0621 protein C-like [Homo sapiens]
Length = 155
Score = 40.4 bits (93), Expect = 0.001
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 96 EFIFSELLSNLHSRGNEKTLVEESAEQAQRRDET 129
EFIFSELL+ L+S G+E L+E+S EQA+ +ET
Sbjct: 92 EFIFSELLAKLYSCGDENMLMEDSTEQAKWCNET 125
Score = 40.4 bits (93), Expect = 0.001
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 148 EFIFSELLSNLYSRGNEKTLLEESAEQA 175
EFIFSELL+ LYS G+E L+E+S EQA
Sbjct: 92 EFIFSELLAKLYSCGDENMLMEDSTEQA 119
Score = 38.5 bits (88), Expect = 0.004
Identities = 19/28 (67%), Positives = 22/28 (78%)
Query: 5 EFIFSELLSNLYSRGNEKTLVEASAEQA 32
EFIFSELL+ LYS G+E L+E S EQA
Sbjct: 92 EFIFSELLAKLYSCGDENMLMEDSTEQA 119
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 35.8 bits (81), Expect = 0.023
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 12/85 (14%)
Query: 64 PRSSSSQSCYPTCTRVGTRRHSWRRRQSR---QTKEFIFSELLSNLHSRGNEKTLVEESA 120
PR S S S T +RV R HSW+R SR +T++ I S++ + SR + K
Sbjct: 287 PRRSRSGSQKRTHSRV--RSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSK------- 337
Query: 121 EQAQRRDETRVGRRRHSWRSRQSRQ 145
++Q + T R H+W S++
Sbjct: 338 GKSQNQSRTPRRGRSHNWSRNPSKE 362
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 34.7 bits (78), Expect = 0.051
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 11/64 (17%)
Query: 87 RRRQSRQTKEFIFSELLSNLHSRGNEKTLVEESAEQA--QRRDETRVGRRRHSWRSRQSR 144
RRRQ RQ +E +E G E++ +E EQ QRRDE + R+R W+ R+ R
Sbjct: 136 RRRQKRQEQERELAE--------GEEQSEKQERLEQRDRQRRDE-ELWRQRQEWQEREER 186
Query: 145 QNKE 148
+ +E
Sbjct: 187 RAEE 190
Score = 29.6 bits (65), Expect = 1.7
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 82 RRHSWRRRQSRQTKEFIFSELLSNLHSRGNEKTLVEESAEQAQRRDETRVGRRRHSWRSR 141
+R W+ R+ R+ +E L S +T EQ +RR+ + R+ + +
Sbjct: 176 QRQEWQEREERRAEE-------EQLQSCKGHETEEFPDEEQLRRRELLELRRKGREEKQQ 228
Query: 142 QSRQNKEFIFSE 153
Q R+ ++ +F E
Sbjct: 229 QRRERQDRVFQE 240
Score = 27.3 bits (59), Expect = 8.2
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 88 RRQSRQTKEFIFSELLSNLHSRGNEKTLVEESAEQAQRRDETRVGRRRHSWRSRQSRQNK 147
RRQ R +E L L E+ EE EQ +R+E RR+ +S + + +
Sbjct: 585 RRQQRLKREQE-ERLEQRLKREEVERLEQEERREQRLKREEPEEERRQQLLKSEEQEERR 643
Query: 148 EFIFSELLSNLYSRGNEKTLLEESAEQADQ 177
+ +L R ++ EE E+ +Q
Sbjct: 644 Q---QQLRREQQERREQRLKREEEEERLEQ 670
>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
Length = 1476
Score = 33.5 bits (75), Expect = 0.11
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 12/168 (7%)
Query: 27 ASAEQADQGVHLLRAAVQPALAWEREDTRGGVGRAGRPRSSSSQ---SCYPTCTRVGTRR 83
A A +A+ H R A A AWE+ R V AG+ S+SQ + G R
Sbjct: 770 AQARRAEAEAH--REA--EAQAWEQARLREAVEAAGQELESASQEREALVEALAAAGRER 825
Query: 84 HSWRRRQSR-QTKEFIFSELLSNLHSRGNEKTLVEESAEQAQRRDETRVGRRRHSWRSRQ 142
W R SR + + E + L S G + +EE+ + + ++ + + R ++
Sbjct: 826 RQWEREGSRLRAQSEAAEERMQVLESEGRQH--LEEAERERREKEALQAELEKAVVRGKE 883
Query: 143 SRQNKEFIFSELLSNLYSRGNEKTLLEESAEQADQGV-HLLRAAVQPA 189
E + EL R E +ES Q QG+ L A +Q A
Sbjct: 884 LGARLEHLQRELEQAALER-QEFLREKESQHQRYQGLEQRLEAELQAA 930
>gi|113425405 PREDICTED: similar to dynamin 1 [Homo sapiens]
Length = 105
Score = 32.3 bits (72), Expect = 0.25
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 106 LHSRGNEKTLVEESAEQAQRRDE 128
++S GN+ TL+EE AEQAQ+ DE
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDE 23
Score = 30.4 bits (67), Expect = 0.97
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 158 LYSRGNEKTLLEESAEQADQGVHLL 182
+YS GN+ TL+EE AEQA Q +L
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEML 25
Score = 27.7 bits (60), Expect = 6.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 15 LYSRGNEKTLVEASAEQADQGVHLL 39
+YS GN+ TL+E AEQA Q +L
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEML 25
>gi|239745286 PREDICTED: hypothetical protein XP_002343417 [Homo
sapiens]
Length = 103
Score = 32.3 bits (72), Expect = 0.25
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 106 LHSRGNEKTLVEESAEQAQRRDE 128
++S GN+ TL+EE AEQAQ+ DE
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDE 23
Score = 30.4 bits (67), Expect = 0.97
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 158 LYSRGNEKTLLEESAEQADQGVHLL 182
+YS GN+ TL+EE AEQA Q +L
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEML 25
Score = 27.7 bits (60), Expect = 6.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 15 LYSRGNEKTLVEASAEQADQGVHLL 39
+YS GN+ TL+E AEQA Q +L
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEML 25
>gi|239745270 PREDICTED: hypothetical protein XP_002343416 [Homo
sapiens]
Length = 63
Score = 32.3 bits (72), Expect = 0.25
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 106 LHSRGNEKTLVEESAEQAQRRDE 128
++S GN+ TL+EE AEQAQ+ DE
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDE 23
Score = 30.4 bits (67), Expect = 0.97
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 158 LYSRGNEKTLLEESAEQADQGVHLL 182
+YS GN+ TL+EE AEQA Q +L
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEML 25
Score = 27.7 bits (60), Expect = 6.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 15 LYSRGNEKTLVEASAEQADQGVHLL 39
+YS GN+ TL+E AEQA Q +L
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEML 25
>gi|239745262 PREDICTED: hypothetical protein XP_002343372 [Homo
sapiens]
Length = 63
Score = 32.3 bits (72), Expect = 0.25
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 106 LHSRGNEKTLVEESAEQAQRRDE 128
++S GN+ TL+EE AEQAQ+ DE
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDE 23
Score = 30.4 bits (67), Expect = 0.97
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 158 LYSRGNEKTLLEESAEQADQGVHLL 182
+YS GN+ TL+EE AEQA Q +L
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEML 25
Score = 27.7 bits (60), Expect = 6.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 15 LYSRGNEKTLVEASAEQADQGVHLL 39
+YS GN+ TL+E AEQA Q +L
Sbjct: 1 MYSCGNQNTLMEELAEQAQQHDEML 25
>gi|30039694 zinc finger protein 598 [Homo sapiens]
Length = 904
Score = 32.3 bits (72), Expect = 0.25
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 81 TRRHSWRRRQSRQTKEFIFSELLSNLHSRGNEKTLVEESAEQAQRRD-ETRVGR------ 133
T HS R ++RQ + + HSR NE + E E+ R + RV R
Sbjct: 267 TACHSRSRAEARQNRHIDLQFSYAPRHSRRNEGVVGGEDYEEVDRYSRQGRVARAGTRGA 326
Query: 134 ---RRHSWRSRQSRQNKEFIFSELLSNLYSRGNEKTLLEESAEQ 174
RR SWR ++ +++E + + + +++ ++ E+ E E+
Sbjct: 327 QQSRRGSWRYKREEEDRE-VAAAVRASVAAQQQEEARRSEDQEE 369
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 31.6 bits (70), Expect = 0.43
Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Query: 38 LLRAAVQPALAWEREDTRGGVGR---AGRPRSSSSQSCYPTCTRVGTRRHSWRRRQSRQT 94
L R A PA+ + + T G+ A +P+ + + ++ R RQ +
Sbjct: 541 LTRPAASPAVGEKLKKTEPAAGKETGAAKPKLTPQE-------KLKLRMQKALNRQFKAD 593
Query: 95 KEFIFSELLSNLHSRGNEKTLVEESAEQAQRRDETRVGRRRHSWRSRQSRQNK 147
K+ +++ H R + + A + + ++ R + R W + SRQ++
Sbjct: 594 KKAAQEKMIQQEHERQEREDELRAMARKIRMKERERREKEREEWERQYSRQSR 646
>gi|239743315 PREDICTED: hypothetical protein XP_002342820 [Homo
sapiens]
Length = 248
Score = 30.8 bits (68), Expect = 0.74
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Query: 19 GNEKTLVEASAEQADQGVHLLRAAVQPALAWEREDTRGGVGRAGRPRSSSSQSCYPTCTR 78
G+E+ ++E +A GV RA P D R P SC+ R
Sbjct: 85 GDERYILEGCG-RARAGVPQTRAPGSPLPLGSVPDPRCDTASLPSPAGGGRTSCWAPGKR 143
Query: 79 VGTRRHSWRRRQSRQTKEFIFSELLSNL 106
TRR SW R+ +R T +E LS L
Sbjct: 144 SRTRRKSW-RKVARTTAGHARTERLSAL 170
>gi|239508997 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 30.8 bits (68), Expect = 0.74
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Query: 19 GNEKTLVEASAEQADQGVHLLRAAVQPALAWEREDTRGGVGRAGRPRSSSSQSCYPTCTR 78
G+E+ ++E +A GV RA P D R P SC+ R
Sbjct: 85 GDERYILEGCG-RARAGVPQTRAPGSPLPLGSVPDPRCDTASLPSPAGGGRTSCWAPGKR 143
Query: 79 VGTRRHSWRRRQSRQTKEFIFSELLSNL 106
TRR SW R+ +R T +E LS L
Sbjct: 144 SRTRRKSW-RKVARTTAGHARTERLSAL 170
>gi|62988361 absent in melanoma 1 [Homo sapiens]
Length = 1723
Score = 30.4 bits (67), Expect = 0.97
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 87 RRRQSRQTKEFIFSELLSNLHSRGNEKTLVEESAEQAQRRDETRVGRRRHSWRSRQSRQN 146
R +++ + +F L +N + GN + LV + RD T G +R SR
Sbjct: 780 RPKRASAEQSVLFKSLHTN--TNGNSEPLVMPEINDKENRDVTNGGIKR-------SRLE 830
Query: 147 KEFIFSELLSNL 158
K +FS LLS+L
Sbjct: 831 KSALFSSLLSSL 842
>gi|4557779 myocilin [Homo sapiens]
Length = 504
Score = 30.0 bits (66), Expect = 1.3
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 66 SSSSQSCYPTCTRVGTRRHSWRRRQSRQTKEFIFSEL-LSNLHSRGNEKTLVEESAEQAQ 124
+S ++S P ++ + H+ +R S Q + ++ LS+L S ++ TL +QA
Sbjct: 54 ASPNESSCPEQSQAMSVIHNLQRDSSTQRLDLEATKARLSSLESLLHQLTL-----DQAA 108
Query: 125 RRDETRVGRRRHSWRSRQSRQNKEFIFSELLSNLYSRGNEKTLLEESAEQADQ 177
R ET+ G +R R+ R E EL + + +K++LEE ++ Q
Sbjct: 109 RPQETQEGLQRELGTLRRERDQLETQTRELETAYSNLLRDKSVLEEEKKRLRQ 161
>gi|239787787 kin of IRRE like 3 isoform 2 [Homo sapiens]
Length = 600
Score = 30.0 bits (66), Expect = 1.3
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 20 NEKTLVEASAEQADQGVHLLRAAVQPALAWEREDTRGGVGRAGRPRSSSSQS 71
NEKTL S Q D G ++ RA V A ERE T + G P SS+Q+
Sbjct: 379 NEKTLTLKSVRQEDAGKYVCRAVVPRVGAGEREVT---LTVNGPPIISSTQT 427
>gi|26006461 kin of IRRE like 3 isoform 1 [Homo sapiens]
Length = 778
Score = 30.0 bits (66), Expect = 1.3
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 20 NEKTLVEASAEQADQGVHLLRAAVQPALAWEREDTRGGVGRAGRPRSSSSQS 71
NEKTL S Q D G ++ RA V A ERE T + G P SS+Q+
Sbjct: 379 NEKTLTLKSVRQEDAGKYVCRAVVPRVGAGEREVT---LTVNGPPIISSTQT 427
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 30.0 bits (66), Expect = 1.3
Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Query: 50 EREDTRGGVGRAGRPRSSSSQSCYPTCTRVGTRRHSWRRRQSRQTKEFIFSELLSNLHSR 109
+R +RG G R RS S + R R RRR+ ++++ S R
Sbjct: 10 KRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLR 69
Query: 110 GNEKTLVEESAEQAQRRDETRVGRRRHSWRSRQSRQNKEFIFSELLSNLYSRGNEKTLLE 169
+ + S E+ + R R R R R R+SR + S+ N SR EKT
Sbjct: 70 RSRSRERDRSRERRRSRSRDR-RRSRSRSRGRRSRSSSPGNKSKKTEN-RSRSKEKTDGG 127
Query: 170 ESAEQ 174
ES+++
Sbjct: 128 ESSKE 132
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.126 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,510,229
Number of Sequences: 37866
Number of extensions: 260006
Number of successful extensions: 1298
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 1191
Number of HSP's gapped (non-prelim): 128
length of query: 191
length of database: 18,247,518
effective HSP length: 96
effective length of query: 95
effective length of database: 14,612,382
effective search space: 1388176290
effective search space used: 1388176290
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.