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Search of human proteins with 239756199
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756199 PREDICTED: hypothetical protein [Homo sapiens]
(182 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756199 PREDICTED: hypothetical protein [Homo sapiens] 391 e-109
gi|4507917 WEE1 tyrosine kinase isoform 1 [Homo sapiens] 39 0.003
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 38 0.005
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 38 0.005
gi|194248077 Kruppel-like factor 4 (gut) [Homo sapiens] 37 0.012
gi|239747357 PREDICTED: hypothetical protein XP_002346431 [Homo ... 37 0.012
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 35 0.027
gi|62945417 dystrophia myotonica-containing WD repeat motif prot... 33 0.10
gi|169169843 PREDICTED: hypothetical protein [Homo sapiens] 32 0.23
gi|169168890 PREDICTED: hypothetical protein LOC441172 [Homo sap... 32 0.23
gi|169169339 PREDICTED: hypothetical protein LOC441172 [Homo sap... 32 0.23
gi|4557595 forkhead box F2 [Homo sapiens] 32 0.23
gi|222352129 von Willebrand factor A domain containing 5B2 [Homo... 32 0.30
gi|239754935 PREDICTED: hypothetical protein [Homo sapiens] 32 0.30
gi|239749477 PREDICTED: hypothetical protein XP_002347062 [Homo ... 32 0.30
gi|239743615 PREDICTED: hypothetical protein XP_002342915 [Homo ... 32 0.30
gi|239753324 PREDICTED: hypothetical protein [Homo sapiens] 32 0.39
gi|169218002 PREDICTED: hypothetical protein [Homo sapiens] 32 0.39
gi|169163057 PREDICTED: hypothetical protein [Homo sapiens] 32 0.39
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 32 0.39
gi|89886480 zinedin isoform 2 [Homo sapiens] 31 0.51
gi|89886477 zinedin isoform 1 [Homo sapiens] 31 0.51
gi|33457350 OTU domain containing 5 isoform a [Homo sapiens] 31 0.51
gi|209977021 OTU domain containing 5 isoform b [Homo sapiens] 31 0.51
gi|209977019 OTU domain containing 5 isoform b [Homo sapiens] 31 0.51
gi|239755904 PREDICTED: hypothetical protein XP_002344738 [Homo ... 31 0.67
gi|170932550 FLT3-interacting zinc finger 1 [Homo sapiens] 31 0.67
gi|37693995 Kruppel-like factor 13 [Homo sapiens] 31 0.67
gi|155969697 keratin 6C [Homo sapiens] 30 0.88
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 30 0.88
>gi|239756199 PREDICTED: hypothetical protein [Homo sapiens]
Length = 182
Score = 391 bits (1004), Expect = e-109
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 1 MQAMPALPTELCSGRVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGE 60
MQAMPALPTELCSGRVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGE
Sbjct: 1 MQAMPALPTELCSGRVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGE 60
Query: 61 GGLEEAGVGVSASDEAGIWMQGHSWRQRTFKELLPLKCQILSSHGCAGHLQGSGFHSGRG 120
GGLEEAGVGVSASDEAGIWMQGHSWRQRTFKELLPLKCQILSSHGCAGHLQGSGFHSGRG
Sbjct: 61 GGLEEAGVGVSASDEAGIWMQGHSWRQRTFKELLPLKCQILSSHGCAGHLQGSGFHSGRG 120
Query: 121 CWRRVLLRRGRCGGWAGDSRAGPESQGQHTQPSTHLDQQWGCPKPVSLIVATPHCQPWRV 180
CWRRVLLRRGRCGGWAGDSRAGPESQGQHTQPSTHLDQQWGCPKPVSLIVATPHCQPWRV
Sbjct: 121 CWRRVLLRRGRCGGWAGDSRAGPESQGQHTQPSTHLDQQWGCPKPVSLIVATPHCQPWRV 180
Query: 181 LG 182
LG
Sbjct: 181 LG 182
>gi|4507917 WEE1 tyrosine kinase isoform 1 [Homo sapiens]
Length = 646
Score = 38.5 bits (88), Expect = 0.003
Identities = 36/126 (28%), Positives = 46/126 (36%), Gaps = 17/126 (13%)
Query: 34 APGPTTQVALEQGSDPHAAPGGAGSGEGGLEEAGV---GVSASDEAGIWMQGHSWRQRTF 90
+P P + E G + +PG A G LEE + +DEAG +G SW + F
Sbjct: 60 SPLPPARSPTEPGPERRRSPGPAPGSPGELEEDLLLPGACPGADEAGGGAEGDSWEEEGF 119
Query: 91 KELLPLKC----QILSSHGCAGHLQGSGFHSGRGCWRRVLLRRGRCGGWAGDSRAGPESQ 146
P+K L S G G S RGC R AG+ R P
Sbjct: 120 GSSSPVKSPAAPYFLGSSFSPVRCGGPGDASPRGCGAR----------RAGEGRRSPRPD 169
Query: 147 GQHTQP 152
T P
Sbjct: 170 HPGTPP 175
Score = 28.1 bits (61), Expect = 4.4
Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 13/98 (13%)
Query: 27 SPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGGLEEAGVGVSA--SDEAGIWMQGHS 84
SP + +PG + L G+ P A G G+ EE G G S+ A + G S
Sbjct: 78 SPGPAPGSPGELEEDLLLPGACPGADEAGGGAEGDSWEEEGFGSSSPVKSPAAPYFLGSS 137
Query: 85 WRQRTFKELLPLKC---QILSSHGCAGHLQGSGFHSGR 119
+ P++C S GC G G S R
Sbjct: 138 FS--------PVRCGGPGDASPRGCGARRAGEGRRSPR 167
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 37.7 bits (86), Expect = 0.005
Identities = 38/115 (33%), Positives = 47/115 (40%), Gaps = 15/115 (13%)
Query: 17 GAGLSCRALS-SPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGGLEEAGV-GVSASD 74
G GL C + +P+G++ GP AL + A GG G G AG G S
Sbjct: 115 GPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSS 174
Query: 75 EAGIWMQGHSWRQRTFKELLPLKCQILSSHGCAGHLQGSGFHSG-----RGCWRR 124
AG R++T L PLK + SS C G L S SG R W R
Sbjct: 175 RAGA-------RRKTPLSLCPLKLRKGSSRRCQG-LGSSWGGSGTPPPPRALWNR 221
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 37.7 bits (86), Expect = 0.005
Identities = 38/115 (33%), Positives = 47/115 (40%), Gaps = 15/115 (13%)
Query: 17 GAGLSCRALS-SPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGGLEEAGV-GVSASD 74
G GL C + +P+G++ GP AL + A GG G G AG G S
Sbjct: 115 GPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSS 174
Query: 75 EAGIWMQGHSWRQRTFKELLPLKCQILSSHGCAGHLQGSGFHSG-----RGCWRR 124
AG R++T L PLK + SS C G L S SG R W R
Sbjct: 175 RAGA-------RRKTPLSLCPLKLRKGSSRRCQG-LGSSWGGSGTPPPPRALWNR 221
>gi|194248077 Kruppel-like factor 4 (gut) [Homo sapiens]
Length = 479
Score = 36.6 bits (83), Expect = 0.012
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 8 PTELCSGRVGAGLSCRALSSPAGSRRAPGPTT---QVALEQGSDPHAAPGGAGSG 59
P E + V + S + SSP+ S A P+T + G+DP APGG G G
Sbjct: 116 PPESVAATVSSSASASSSSSPSSSGPASAPSTCSFTYPIRAGNDPGVAPGGTGGG 170
>gi|239747357 PREDICTED: hypothetical protein XP_002346431 [Homo
sapiens]
Length = 205
Score = 36.6 bits (83), Expect = 0.012
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 22 CRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGGLEEAGVG---VSASDEAGI 78
CR G R G A+ + +P AAPG E G E+GVG + +E +
Sbjct: 14 CRRRRRREGEERKTGVPAAAAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGTGREEGSV 73
Query: 79 WMQGH-SWRQR 88
+ +G +WR+R
Sbjct: 74 FRKGEGTWRRR 84
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 35.4 bits (80), Expect = 0.027
Identities = 37/115 (32%), Positives = 46/115 (40%), Gaps = 15/115 (13%)
Query: 17 GAGLSCRALS-SPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGGLEEAGV-GVSASD 74
G GL C + +P+G++ GP AL + A GG G AG G S
Sbjct: 115 GPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRASHSGPRAGTPGGGRSS 174
Query: 75 EAGIWMQGHSWRQRTFKELLPLKCQILSSHGCAGHLQGSGFHSG-----RGCWRR 124
AG R++T L PLK + SS C G L S SG R W R
Sbjct: 175 RAGA-------RRKTPLSLCPLKLRKGSSRRCQG-LGSSWGGSGTPPPPRALWNR 221
>gi|62945417 dystrophia myotonica-containing WD repeat motif protein
[Homo sapiens]
Length = 674
Score = 33.5 bits (75), Expect = 0.10
Identities = 21/63 (33%), Positives = 25/63 (39%)
Query: 19 GLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGGLEEAGVGVSASDEAGI 78
G + A SS G PGP + S PH A GG G G E G S A +
Sbjct: 467 GTTPPAASSSRGGEPGPGPLPRSLSRSNSLPHPAGGGKAGGPGVAAEPGTPFSIGRFATL 526
Query: 79 WMQ 81
+Q
Sbjct: 527 TLQ 529
>gi|169169843 PREDICTED: hypothetical protein [Homo sapiens]
Length = 213
Score = 32.3 bits (72), Expect = 0.23
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 12/105 (11%)
Query: 13 SGRVGAGLSCRALSSPAGSRRAPGPTTQVALE-QGSDPHAAPGGAGSGEGGLEEAGVGVS 71
+GR GAG S +SPAGS P P + + + A GG E ++ G
Sbjct: 80 TGRQGAGGSSSPGASPAGS---PPPARRPLTDFHSAVVQARSGGLQGVEAAVQRGGAVAQ 136
Query: 72 --------ASDEAGIWMQGHSWRQRTFKELLPLKCQILSSHGCAG 108
A D G QG W + + +P +C ++H AG
Sbjct: 137 RGRLALELAEDVPGAARQGLLWTEVRARSFVPPRCHPPTAHLLAG 181
>gi|169168890 PREDICTED: hypothetical protein LOC441172 [Homo
sapiens]
Length = 324
Score = 32.3 bits (72), Expect = 0.23
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 12/105 (11%)
Query: 13 SGRVGAGLSCRALSSPAGSRRAPGPTTQVALE-QGSDPHAAPGGAGSGEGGLEEAGVGVS 71
+GR GAG S +SPAGS P P + + + A GG E ++ G
Sbjct: 80 TGRQGAGGSSSPGASPAGS---PPPARRPLTDFHSAVVQARSGGLQGVEAAVQRGGAVAQ 136
Query: 72 --------ASDEAGIWMQGHSWRQRTFKELLPLKCQILSSHGCAG 108
A D G QG W + + +P +C ++H AG
Sbjct: 137 RGRLALELAEDVPGAARQGLLWTEVRARSFVPPRCHPPTAHLLAG 181
>gi|169169339 PREDICTED: hypothetical protein LOC441172 [Homo
sapiens]
Length = 324
Score = 32.3 bits (72), Expect = 0.23
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 12/105 (11%)
Query: 13 SGRVGAGLSCRALSSPAGSRRAPGPTTQVALE-QGSDPHAAPGGAGSGEGGLEEAGVGVS 71
+GR GAG S +SPAGS P P + + + A GG E ++ G
Sbjct: 80 TGRQGAGGSSSPGASPAGS---PPPARRPLTDFHSAVVQARSGGLQGVEAAVQRGGAVAQ 136
Query: 72 --------ASDEAGIWMQGHSWRQRTFKELLPLKCQILSSHGCAG 108
A D G QG W + + +P +C ++H AG
Sbjct: 137 RGRLALELAEDVPGAARQGLLWTEVRARSFVPPRCHPPTAHLLAG 181
>gi|4557595 forkhead box F2 [Homo sapiens]
Length = 444
Score = 32.3 bits (72), Expect = 0.23
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Query: 3 AMPALPTELCSGRVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGG 62
A A P S + SC + SS + S AP + A GGAG+G GG
Sbjct: 37 AAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACK---------SAGGGGAGAGSGG 87
Query: 63 LEEAGVGV 70
++A G+
Sbjct: 88 AKKASSGL 95
>gi|222352129 von Willebrand factor A domain containing 5B2 [Homo
sapiens]
Length = 1242
Score = 32.0 bits (71), Expect = 0.30
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 6 ALPTELCSGRVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSG 59
+LP L VG G S A SP+ S + GP QV +GSD A+ G G G
Sbjct: 1106 SLPWALLGPGVGQGDSATASCSPSPSSGSEGP-GQVDSGRGSDTEASEGAEGLG 1158
Score = 26.9 bits (58), Expect = 9.7
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 6 ALPTELCSGRVGAGLSCRALSSPAG-SRRAPGPTTQVALEQGSDPHAAPGGAGSGEGGLE 64
AL TE+ + A L+ R+LSSP G + + PG + +L D + G G+ GL+
Sbjct: 737 ALSTEVLGRQHRAALAGRSLSSPPGRANQVPGRPRKPSLGAILDGPSPEPGQQLGQ-GLD 795
Query: 65 EAG 67
++G
Sbjct: 796 DSG 798
>gi|239754935 PREDICTED: hypothetical protein [Homo sapiens]
Length = 397
Score = 32.0 bits (71), Expect = 0.30
Identities = 30/82 (36%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 15 RVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGGLEEAGVGVSASD 74
R G G S R S S RA P ++ A P APG G G VG+ AS
Sbjct: 132 RQGGGRSVRG--SAESSLRASFPFSRRARGARLQP-PAPGKRGRG-AATRVFLVGLFASP 187
Query: 75 EAGIWMQGHSWRQRTFKELLPL 96
A + SW RT +LLPL
Sbjct: 188 RAAALLGDRSWEARTEPQLLPL 209
>gi|239749477 PREDICTED: hypothetical protein XP_002347062 [Homo
sapiens]
Length = 397
Score = 32.0 bits (71), Expect = 0.30
Identities = 30/82 (36%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 15 RVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGGLEEAGVGVSASD 74
R G G S R S S RA P ++ A P APG G G VG+ AS
Sbjct: 132 RQGGGRSVRG--SAESSLRASFPFSRRARGARLQP-PAPGKRGRG-AATRVFLVGLFASP 187
Query: 75 EAGIWMQGHSWRQRTFKELLPL 96
A + SW RT +LLPL
Sbjct: 188 RAAALLGDRSWEARTEPQLLPL 209
>gi|239743615 PREDICTED: hypothetical protein XP_002342915 [Homo
sapiens]
Length = 397
Score = 32.0 bits (71), Expect = 0.30
Identities = 30/82 (36%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 15 RVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGGLEEAGVGVSASD 74
R G G S R S S RA P ++ A P APG G G VG+ AS
Sbjct: 132 RQGGGRSVRG--SAESSLRASFPFSRRARGARLQP-PAPGKRGRG-AATRVFLVGLFASP 187
Query: 75 EAGIWMQGHSWRQRTFKELLPL 96
A + SW RT +LLPL
Sbjct: 188 RAAALLGDRSWEARTEPQLLPL 209
>gi|239753324 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 31.6 bits (70), Expect = 0.39
Identities = 18/49 (36%), Positives = 21/49 (42%)
Query: 14 GRVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGG 62
G GA LS G R P P Q++L S A PGG +G G
Sbjct: 117 GCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREARPGGPQAGRAG 165
Score = 26.9 bits (58), Expect = 9.7
Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 12 CSGRVGAGLSCRALSSPAGSR--RAPGPTTQVALEQGSDPHAAPGGAG 57
CS + AG SC A PA S PGP VA P PGG G
Sbjct: 73 CSRPLCAGSSCLATPEPARSPSIAEPGPGIPVA---AIKPVILPGGGG 117
>gi|169218002 PREDICTED: hypothetical protein [Homo sapiens]
Length = 218
Score = 31.6 bits (70), Expect = 0.39
Identities = 18/49 (36%), Positives = 21/49 (42%)
Query: 14 GRVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGG 62
G GA LS G R P P Q++L S A PGG +G G
Sbjct: 90 GCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREARPGGPQAGRAG 138
>gi|169163057 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 31.6 bits (70), Expect = 0.39
Identities = 18/49 (36%), Positives = 21/49 (42%)
Query: 14 GRVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGG 62
G GA LS G R P P Q++L S A PGG +G G
Sbjct: 117 GCTGARTENPPLSPTRGDCRVPVPAAQISLRWRSGREARPGGPQAGRAG 165
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 31.6 bits (70), Expect = 0.39
Identities = 41/163 (25%), Positives = 56/163 (34%), Gaps = 22/163 (13%)
Query: 31 SRRAPGPTTQVALEQG----SDPHAAPGGAGSGEGGLEEAGV---GVSASDEAGIWMQGH 83
+RR P P + E G + A PG G G + A G +SD +G
Sbjct: 1937 ARRGPPPLARAVPEPGPRGRAGTEAGPGARGGRLGLVRVASALSSGSESSDRSGFR---- 1992
Query: 84 SWRQRTFKELLP----LKCQILSSHGCAGHLQGSGFHSGRGCWRRVLLRRGRCGGWAGDS 139
RQ TF + P + ++ S+ A QG+ GR V L RC
Sbjct: 1993 --RQLTFIKESPGLRRRRSELSSAESAASAPQGASPRRGRPALPAVFLCSSRCEELRAAP 2050
Query: 140 RAGPESQGQ-----HTQPSTHLDQQWGCPKPVSLIVATPHCQP 177
R GP Q P ++ P L V P +P
Sbjct: 2051 RQGPAPARQRPPAARPSPGERPARRTTSESPSRLPVRAPAARP 2093
>gi|89886480 zinedin isoform 2 [Homo sapiens]
Length = 760
Score = 31.2 bits (69), Expect = 0.51
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 7/45 (15%)
Query: 18 AGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGG 62
A SCR P GS PGPT + S P PG AG G GG
Sbjct: 13 AASSCR----PLGSGAGPGPTGAAPV---SAPAPGPGPAGKGGGG 50
>gi|89886477 zinedin isoform 1 [Homo sapiens]
Length = 753
Score = 31.2 bits (69), Expect = 0.51
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 7/45 (15%)
Query: 18 AGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGG 62
A SCR P GS PGPT + S P PG AG G GG
Sbjct: 13 AASSCR----PLGSGAGPGPTGAAPV---SAPAPGPGPAGKGGGG 50
>gi|33457350 OTU domain containing 5 isoform a [Homo sapiens]
Length = 571
Score = 31.2 bits (69), Expect = 0.51
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 14 GRVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAG-SGEGGLEEAGVGVSA 72
G VG G C R+APG V G P GAG + E E A + A
Sbjct: 135 GAVGVGGCCSGPGHSKRRRQAPG----VGAVGGGSPEREEVGAGYNSEDEYEAAAARIEA 190
Query: 73 SDEAGIWMQGHSWRQRTFKE 92
D A + Q H W ++ ++
Sbjct: 191 MDPATVEQQEH-WFEKALRD 209
Score = 27.3 bits (59), Expect = 7.4
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Query: 24 ALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEG---GLEEAGVGVS 71
AL+ P G+ P P + P PGG G G G G AGVG +
Sbjct: 82 ALAVPPGAVAGPRPQ-----QASPPPCGGPGGPGGGPGDALGAAAAGVGAA 127
>gi|209977021 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 31.2 bits (69), Expect = 0.51
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 14 GRVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAG-SGEGGLEEAGVGVSA 72
G VG G C R+APG V G P GAG + E E A + A
Sbjct: 135 GAVGVGGCCSGPGHSKRRRQAPG----VGAVGGGSPEREEVGAGYNSEDEYEAAAARIEA 190
Query: 73 SDEAGIWMQGHSWRQRTFKE 92
D A + Q H W ++ ++
Sbjct: 191 MDPATVEQQEH-WFEKALRD 209
Score = 27.3 bits (59), Expect = 7.4
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Query: 24 ALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEG---GLEEAGVGVS 71
AL+ P G+ P P + P PGG G G G G AGVG +
Sbjct: 82 ALAVPPGAVAGPRPQ-----QASPPPCGGPGGPGGGPGDALGAAAAGVGAA 127
>gi|209977019 OTU domain containing 5 isoform b [Homo sapiens]
Length = 566
Score = 31.2 bits (69), Expect = 0.51
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
Query: 14 GRVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAG-SGEGGLEEAGVGVSA 72
G VG G C R+APG V G P GAG + E E A + A
Sbjct: 135 GAVGVGGCCSGPGHSKRRRQAPG----VGAVGGGSPEREEVGAGYNSEDEYEAAAARIEA 190
Query: 73 SDEAGIWMQGHSWRQRTFKE 92
D A + Q H W ++ ++
Sbjct: 191 MDPATVEQQEH-WFEKALRD 209
Score = 27.3 bits (59), Expect = 7.4
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 8/51 (15%)
Query: 24 ALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEG---GLEEAGVGVS 71
AL+ P G+ P P + P PGG G G G G AGVG +
Sbjct: 82 ALAVPPGAVAGPRPQ-----QASPPPCGGPGGPGGGPGDALGAAAAGVGAA 127
>gi|239755904 PREDICTED: hypothetical protein XP_002344738 [Homo
sapiens]
Length = 205
Score = 30.8 bits (68), Expect = 0.67
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 8 PTELCSGRVGAGLS-CRALSSPAGSRRA--PGPTTQVALEQGSDPHAAPGGAGSGEGGLE 64
P +C G+G S C A S+ +GSR A P P + + P +APG + G
Sbjct: 134 PVSICLS-AGSGFSKCSASSAISGSRPAVMPQPAPRASTPPPRPPPSAPGPSQPPAAGSG 192
Query: 65 EAGVGVSA 72
+A V SA
Sbjct: 193 DASVATSA 200
>gi|170932550 FLT3-interacting zinc finger 1 [Homo sapiens]
Length = 496
Score = 30.8 bits (68), Expect = 0.67
Identities = 44/158 (27%), Positives = 57/158 (36%), Gaps = 44/158 (27%)
Query: 17 GAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEG--GLEEAGVGVSAS- 73
G GL ALS+P GP + V G+ P GAG+G G GL EA +AS
Sbjct: 141 GPGLP--ALSAPCSVCCNVGPCS-VCGGSGAGGGEGPEGAGAGLGSWGLAEAAAAAAASL 197
Query: 74 -----------DEAGIWMQGHSWRQRTFKELLPLKCQ----------ILSSHGCAGHLQG 112
+ G + H W T ++ P KC +L H LQG
Sbjct: 198 PPFACGACARRFDHGRELAAH-WAAHT--DVKPFKCPRCERDFNAPALLERHKLTHDLQG 254
Query: 113 SGFHSGRGCWRRVLLRRGRCGGWAGDSRAGPESQGQHT 150
G + WA AGPE+ G+ T
Sbjct: 255 PGAPPAQA--------------WAAGPGAGPETAGEGT 278
>gi|37693995 Kruppel-like factor 13 [Homo sapiens]
Length = 288
Score = 30.8 bits (68), Expect = 0.67
Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 11/61 (18%)
Query: 5 PALPTELCSGRVGAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAPGGAGSGEGGLE 64
P P G GA A SPA S P E G +P PG AGSGE GL
Sbjct: 100 PPAPEPTSPGAEGAAA---APPSPAWSEPEP--------EAGLEPEREPGPAGSGEPGLR 148
Query: 65 E 65
+
Sbjct: 149 Q 149
>gi|155969697 keratin 6C [Homo sapiens]
Length = 564
Score = 30.4 bits (67), Expect = 0.88
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 17 GAGLSCRALSSPAGSRRAPGPTTQVALEQGSDPHAAP----GGAGSGEGGLEEAGVGVSA 72
GAG R+L GS+R A+ G A GGAGSG G AG+G
Sbjct: 53 GAGFGSRSLYGLGGSKRISIGGGSCAISGGYGSRAGGSYGFGGAGSGFGFGGGAGIGFGL 112
Query: 73 SDEAGI 78
AG+
Sbjct: 113 GGGAGL 118
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 30.4 bits (67), Expect = 0.88
Identities = 26/79 (32%), Positives = 31/79 (39%), Gaps = 12/79 (15%)
Query: 2 QAMPALPTELCSGRV----GAGLSCRALSSPAGSRRAPGPTTQ-------VALEQGSDPH 50
+A P P G V GA + A + G RR PGP + V + G P
Sbjct: 104 KATPLAPKGAAPGAVQPVAGAEAAPAATLAALGGRR-PGPPEEPPRELESVPSKLGEPPP 162
Query: 51 AAPGGAGSGEGGLEEAGVG 69
GG G GEGG G G
Sbjct: 163 LGEGGGGGGEGGGAGGGSG 181
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,580,334
Number of Sequences: 37866
Number of extensions: 546658
Number of successful extensions: 3290
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 146
Number of HSP's that attempted gapping in prelim test: 3117
Number of HSP's gapped (non-prelim): 288
length of query: 182
length of database: 18,247,518
effective HSP length: 96
effective length of query: 86
effective length of database: 14,612,382
effective search space: 1256664852
effective search space used: 1256664852
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.