BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239755909 PREDICTED: hypothetical protein [Homo sapiens] (212 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239755909 PREDICTED: hypothetical protein [Homo sapiens] 438 e-123 gi|239750423 PREDICTED: hypothetical protein XP_002347390 [Homo ... 438 e-123 gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo ... 282 1e-76 gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 45 5e-05 gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 45 5e-05 gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 45 5e-05 gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 42 5e-04 gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo ... 42 5e-04 gi|21464115 methyl-CpG binding domain protein 1 isoform 2 [Homo ... 40 0.002 gi|226437602 NK1 homeobox 2 [Homo sapiens] 39 0.003 gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] 39 0.003 gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003 gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] 39 0.003 gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ... 39 0.003 gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] 39 0.003 gi|116805350 homeo box (H6 family) 1 [Homo sapiens] 39 0.003 gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] 39 0.004 gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ... 37 0.009 gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 37 0.012 gi|71274172 ankyrin repeat domain 56 [Homo sapiens] 37 0.012 gi|239735519 SET binding factor 1 [Homo sapiens] 37 0.016 gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 37 0.016 gi|239755607 PREDICTED: hypothetical protein XP_002344620 [Homo ... 36 0.021 gi|58219064 Src homology 2 domain containing E [Homo sapiens] 36 0.021 gi|238550210 Z-DNA binding protein 1 isoform c [Homo sapiens] 36 0.028 gi|238550208 Z-DNA binding protein 1 isoform b [Homo sapiens] 36 0.028 gi|238550206 Z-DNA binding protein 1 isoform a [Homo sapiens] 36 0.028 gi|194363768 homeobox D9 [Homo sapiens] 36 0.028 gi|4758156 diacylglycerol kinase, iota [Homo sapiens] 36 0.028 gi|110227617 centaurin, gamma 3 isoform b [Homo sapiens] 35 0.036 >gi|239755909 PREDICTED: hypothetical protein [Homo sapiens] Length = 212 Score = 438 bits (1126), Expect = e-123 Identities = 212/212 (100%), Positives = 212/212 (100%) Query: 1 MEPGRVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGL 60 MEPGRVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGL Sbjct: 1 MEPGRVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGL 60 Query: 61 VGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGP 120 VGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGP Sbjct: 61 VGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGP 120 Query: 121 GPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPR 180 GPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPR Sbjct: 121 GPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPR 180 Query: 181 GAAAGEAEGAEEGEEGCRAGPFMAETQVVRPG 212 GAAAGEAEGAEEGEEGCRAGPFMAETQVVRPG Sbjct: 181 GAAAGEAEGAEEGEEGCRAGPFMAETQVVRPG 212 >gi|239750423 PREDICTED: hypothetical protein XP_002347390 [Homo sapiens] Length = 212 Score = 438 bits (1126), Expect = e-123 Identities = 212/212 (100%), Positives = 212/212 (100%) Query: 1 MEPGRVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGL 60 MEPGRVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGL Sbjct: 1 MEPGRVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGL 60 Query: 61 VGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGP 120 VGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGP Sbjct: 61 VGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGP 120 Query: 121 GPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPR 180 GPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPR Sbjct: 121 GPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPR 180 Query: 181 GAAAGEAEGAEEGEEGCRAGPFMAETQVVRPG 212 GAAAGEAEGAEEGEEGCRAGPFMAETQVVRPG Sbjct: 181 GAAAGEAEGAEEGEEGCRAGPFMAETQVVRPG 212 >gi|239744725 PREDICTED: hypothetical protein XP_002343253 [Homo sapiens] Length = 756 Score = 282 bits (722), Expect = 1e-76 Identities = 162/254 (63%), Positives = 167/254 (65%), Gaps = 46/254 (18%) Query: 5 RVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGLVGQA 64 RVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGLVGQA Sbjct: 503 RVKAKGAVQCATPRAGLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGLVGQA 562 Query: 65 VAQHRLLQRLG------SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSEL--------- 109 VAQHRLLQRLG +P + R GPGG G +L Sbjct: 563 VAQHRLLQRLGWRLPGQAPGQELLGQARPGGGLSSLSGGPGGGSGVGRWQLPGRAAAEDV 622 Query: 110 ----------------------RALGRPGAAGPGPGSGDASALAGGPRPVS--------- 138 RA G A G G G+ L G P + Sbjct: 623 AEAAAKVLEGAGPGRPRRGQLLRAAGLGQARGGGAGAWLRGRLGLGWGPTACVPVVAARR 682 Query: 139 RDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPRGAAAGEAEGAEEGEEGCR 198 DTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPRGAAAGEAEGAEEGEEGCR Sbjct: 683 PDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPRGAAAGEAEGAEEGEEGCR 742 Query: 199 AGPFMAETQVVRPG 212 AGPFMAETQVVRPG Sbjct: 743 AGPFMAETQVVRPG 756 >gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] Length = 814 Score = 45.1 bits (105), Expect = 5e-05 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 8/63 (12%) Query: 76 SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPR 135 S E + K+W + RR WK+Q PG A + G GPGPG+G + L GG Sbjct: 700 SLTETQVKIWFQNRRTKWKKQNPGADTSAPTG--------GGGGPGPGAGPGTGLPGGLS 751 Query: 136 PVS 138 P+S Sbjct: 752 PLS 754 >gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] Length = 653 Score = 45.1 bits (105), Expect = 5e-05 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 8/63 (12%) Query: 76 SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPR 135 S E + K+W + RR WK+Q PG A + G GPGPG+G + L GG Sbjct: 135 SLTETQVKIWFQNRRTKWKKQNPGADTSAPTG--------GGGGPGPGAGPGTGLPGGLS 186 Query: 136 PVS 138 P+S Sbjct: 187 PLS 189 >gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] Length = 411 Score = 45.1 bits (105), Expect = 5e-05 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 8/63 (12%) Query: 76 SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPR 135 S E + K+W + RR WK+Q PG A + G GPGPG+G + L GG Sbjct: 297 SLTETQVKIWFQNRRTKWKKQNPGADTSAPTG--------GGGGPGPGAGPGTGLPGGLS 348 Query: 136 PVS 138 P+S Sbjct: 349 PLS 351 >gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] Length = 819 Score = 41.6 bits (96), Expect = 5e-04 Identities = 46/172 (26%), Positives = 69/172 (40%), Gaps = 17/172 (9%) Query: 34 VGAIGARGPAQRQPPALPACPAVHGGLVGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCW 93 +GA AR P + A A PA+ G + LGS ++ R+ K Sbjct: 22 LGAALARTPVELA--AESAAPALSAAAAGVKI--------LGSGDKKLRRQKAAAGGK-- 69 Query: 94 KEQGPGGRGGASSSELRALGRPGAAGPGP---GSGDASALAGGPRPVS-RDTSSARSGAC 149 K + G +G + E R + A G G G+ A A G + + R R G Sbjct: 70 KARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPRRRGQK 129 Query: 150 CGCSRANSQYWRASSRAAATACNSQNSLQPRGAAAG-EAEGAEEGEEGCRAG 200 + + WRA AAA + N Q AAAG +++G E+ ++ AG Sbjct: 130 AAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAG 181 Score = 34.3 bits (77), Expect = 0.080 Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 18/130 (13%) Query: 80 RRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGP--GPGSGDASALAGGPRPV 137 R++ W+ RR+ K RGG S +P GP G S GG +P Sbjct: 399 RKKPRWQNPRRRAQKAPAAKPRGGGSK-------KPRRRGPKAAKSRGGKSRSGGGKKPR 451 Query: 138 SRDTSSARSGACCGC-SRANSQYWRASSRAAAT-------ACNSQNSLQPRGAAAGEAEG 189 R + + A G SR + + R + AA T +S +L RG A EA G Sbjct: 452 RRGQKARQKAAEAGAESRGDKKQGRQKASAAGTKSRGGGLKSHSGKNLWRRGQKA-EAAG 510 Query: 190 AEEGEEGCRA 199 + G ++ Sbjct: 511 EKATAAGAKS 520 >gi|239748752 PREDICTED: hypothetical protein XP_002346787 [Homo sapiens] Length = 278 Score = 41.6 bits (96), Expect = 5e-04 Identities = 43/144 (29%), Positives = 56/144 (38%), Gaps = 21/144 (14%) Query: 89 RRKCWKEQGPGGRGGASSSEL-----RALGRPGAA-----GPGPGSGDASALAGGPRPVS 138 R WK +GP GR A+S+E R PGA P P + AS+LA P P Sbjct: 53 RGPLWKGRGPAGRAPAASAETALPRPREPPEPGAGPSPKRSPPPRAPRASSLA-APEPQV 111 Query: 139 RDTSS---ARSGACCGCSRA---NSQYWRASSRAAATACNSQNSLQPRGAAAGEAEGAEE 192 D +S R G C +R + R+S A +C + + G G Sbjct: 112 GDWTSREGRRGGPCLPGARRRLFSLSVSRSSGPPRARSCAPHPAREGMATTRGPEAGLRV 171 Query: 193 GEEGCRAG----PFMAETQVVRPG 212 G RAG P A+ RPG Sbjct: 172 SGRGARAGSSTAPTRAQASPARPG 195 >gi|21464115 methyl-CpG binding domain protein 1 isoform 2 [Homo sapiens] Length = 586 Score = 39.7 bits (91), Expect = 0.002 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%) Query: 74 LGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGG 133 L P R+ W+ ++R+C + + +GG S ++ A RPGA P S Sbjct: 244 LRPPRPGLRRQWKCVQRRCLRGKHARRKGGCDS-KMAARRRPGAQPLPPPPPSQSPEPTE 302 Query: 134 PRPVSRDTSSARSGACCGCSR 154 P+P + + + GAC C R Sbjct: 303 PQPYTNRRQNRKCGACAACLR 323 >gi|226437602 NK1 homeobox 2 [Homo sapiens] Length = 310 Score = 38.9 bits (89), Expect = 0.003 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Query: 76 SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPR 135 S E + K+W + RR WK+Q PG G A +PGAAG G G G G P Sbjct: 201 SLTETQVKIWFQNRRTKWKKQNPGADGAAQVG--GGAPQPGAAGGGGGGGS----GGSPG 254 Query: 136 P 136 P Sbjct: 255 P 255 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Query: 100 GRGGASSSELRALGRPGAAGPGPGSGDASALAGGPRPVSRDTSSAR 145 G+ +S +R L P AA GPG+G AS L G D R Sbjct: 56 GKDASSRDPVRQLETPDAA--GPGAGQASPLEGSEAEEEEDAEDPR 99 >gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] Length = 332 Score = 38.9 bits (89), Expect = 0.003 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Query: 76 SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPR 135 S E + K+W + RR WK+Q PG G A +PGAAG G G G G P Sbjct: 223 SLTETQVKIWFQNRRTKWKKQNPGADGAAQVG--GGAPQPGAAGGGGGGGS----GGSPG 276 Query: 136 P 136 P Sbjct: 277 P 277 >gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] Length = 336 Score = 38.9 bits (89), Expect = 0.003 Identities = 55/191 (28%), Positives = 66/191 (34%), Gaps = 42/191 (21%) Query: 37 IGARGPAQRQPPALPACPAVHGGLVGQAVAQHRLLQRLGSPAERRR-------------- 82 +GA QR PP P+ P + + R+ R PA R Sbjct: 144 LGANQKRQRMPPLPPSSPKARMERASRKLPS-RVNSRPPHPAPTRPTPRVQGGFGREPRA 202 Query: 83 -----KMWRRLRRKCWKEQGPGGRGGASSSELRA-----LGRP----GAAGPGPGSGDAS 128 + W R ++ GP R G LR+ GRP GAAG G GSG A+ Sbjct: 203 AAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTG-GSGWAA 261 Query: 129 ALAGGPRPVSRDTSSARSGACC----GCSRANSQYWRASSRAAATACNSQNSLQPRGAAA 184 AL G P P S SSA C GC W + A S P G Sbjct: 262 ALRGWPAPSSFAASSALPEECLPPRRGCG------W--AELLEREAGGSDTGHLPLGNEG 313 Query: 185 GEAEGAEEGEE 195 G EG E E Sbjct: 314 GRGEGEGEASE 324 >gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] Length = 332 Score = 38.9 bits (89), Expect = 0.003 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Query: 76 SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPR 135 S E + K+W + RR WK+Q PG G A +PGAAG G G G G P Sbjct: 223 SLTETQVKIWFQNRRTKWKKQNPGADGAAQVG--GGAPQPGAAGGGGGGGS----GGSPG 276 Query: 136 P 136 P Sbjct: 277 P 277 >gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo sapiens] Length = 336 Score = 38.9 bits (89), Expect = 0.003 Identities = 55/191 (28%), Positives = 66/191 (34%), Gaps = 42/191 (21%) Query: 37 IGARGPAQRQPPALPACPAVHGGLVGQAVAQHRLLQRLGSPAERRR-------------- 82 +GA QR PP P+ P + + R+ R PA R Sbjct: 144 LGANQKRQRMPPLPPSSPKARMERASRKLPS-RVNSRPPHPAPTRPTPRVQGGFGREPRA 202 Query: 83 -----KMWRRLRRKCWKEQGPGGRGGASSSELRA-----LGRP----GAAGPGPGSGDAS 128 + W R ++ GP R G LR+ GRP GAAG G GSG A+ Sbjct: 203 AAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTG-GSGWAA 261 Query: 129 ALAGGPRPVSRDTSSARSGACC----GCSRANSQYWRASSRAAATACNSQNSLQPRGAAA 184 AL G P P S SSA C GC W + A S P G Sbjct: 262 ALRGWPAPSSFAASSALPEECLPPRRGCG------W--AELLEREAGGSDTGHLPLGNEG 313 Query: 185 GEAEGAEEGEE 195 G EG E E Sbjct: 314 GRGEGEGEASE 324 >gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] Length = 332 Score = 38.9 bits (89), Expect = 0.003 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 6/61 (9%) Query: 76 SPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPR 135 S E + K+W + RR WK+Q PG G A +PGAAG G G G G P Sbjct: 223 SLTETQVKIWFQNRRTKWKKQNPGADGAAQVG--GGAPQPGAAGGGGGGGS----GGSPG 276 Query: 136 P 136 P Sbjct: 277 P 277 >gi|116805350 homeo box (H6 family) 1 [Homo sapiens] Length = 348 Score = 38.9 bits (89), Expect = 0.003 Identities = 46/141 (32%), Positives = 53/141 (37%), Gaps = 31/141 (21%) Query: 80 RRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAG----PGPGSGDASAL----- 130 RRR++ RR R+ GPGG A RAL PGA G P PG G AL Sbjct: 61 RRRRLQRR--RQLLAGTGPGGEARA-----RALLGPGALGLGPRPPPGPGPPFALGCGGA 113 Query: 131 -----------AGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQP 179 GG P + D S +G G RA + R A L Sbjct: 114 ARWYPRAHGGYGGGLSPDTSDRDSPETGEEMG--RAEGAWPRGPGPGAVQ--REAAELAA 169 Query: 180 RGAAAGEAEGAEEGEEGCRAG 200 RG AAG E +E E AG Sbjct: 170 RGPAAGTEEASELAEVPAAAG 190 >gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens] Length = 1215 Score = 38.5 bits (88), Expect = 0.004 Identities = 40/141 (28%), Positives = 54/141 (38%), Gaps = 23/141 (16%) Query: 72 QRLGSPAERRRKMW---RRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDAS 128 +R+ P +RR W R R C G GGA A GPG SG Sbjct: 99 ERIPEPVQRRIVYWSFPRSEREICMYSSFNTG-GGA------------AGGPGDDSGGGG 145 Query: 129 ALAGGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPRGAAAGEAE 188 GG S + +A S A + A++ AAA A + + P AAG A+ Sbjct: 146 GAGGGGGGGSSSSPAATSAAATSAA-------AAAAAAAAAAAAAAGAGAPSVGAAGAAD 198 Query: 189 GAEEGEEGCRAGPFMAETQVV 209 G +E R G + E+ V Sbjct: 199 GGDETRLPFRRGIALLESGCV 219 Score = 30.8 bits (68), Expect = 0.89 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 16/63 (25%) Query: 89 RRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPRPVSRDTSSARSGA 148 +R C + G GG GG+S G G G G +SA GPR A + A Sbjct: 12 KRLCCRPGGGGGGGGSS-----------GGGGGAGGGYSSACRPGPR-----AGGAAAAA 55 Query: 149 CCG 151 CG Sbjct: 56 ACG 58 Score = 28.1 bits (61), Expect = 5.7 Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 5/56 (8%) Query: 101 RGGASSSELRALGRPGAAGPGPGSGDASALAGGP-----RPVSRDTSSARSGACCG 151 RG R RPG G G GS AGG RP R +A + AC G Sbjct: 4 RGQQPPPAKRLCCRPGGGGGGGGSSGGGGGAGGGYSSACRPGPRAGGAAAAAACGG 59 >gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo sapiens] Length = 321 Score = 37.4 bits (85), Expect = 0.009 Identities = 56/190 (29%), Positives = 67/190 (35%), Gaps = 44/190 (23%) Query: 37 IGARGPAQRQPPALPACPAVHGGLVGQAVAQHRLLQRLGSPAERRR-------------- 82 +GA QR PP P+ P + + R+ R PA R Sbjct: 144 LGANQKRQRMPPLPPSSPKARMERASRKLPS-RVNSRPPHPAPTRPTPRVQGGFGREPRA 202 Query: 83 -----KMWRRLRRKCWKEQGPGGRGGASSSELRA-----LGRP----GAAGPGPGSGDAS 128 + W R ++ GP R G LR+ GRP GAAG G GSG A+ Sbjct: 203 AAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSGRPPDSAGAAGTG-GSGWAA 261 Query: 129 ALAGGPRPVSRDTSSARSGACC----GCSRANSQYWRASSRAAATACNSQNSLQPRGAAA 184 AL G P P S SSA C GC W + A S P G Sbjct: 262 ALRGWPAPSSFAASSALPEECLPPRRGCG------W--AELLEREAGGSDTGHLPLGNEG 313 Query: 185 GEAEGAEEGE 194 G EG EGE Sbjct: 314 GRGEG--EGE 321 >gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] Length = 1192 Score = 37.0 bits (84), Expect = 0.012 Identities = 49/208 (23%), Positives = 68/208 (32%), Gaps = 48/208 (23%) Query: 28 EELQHAVGAI----GARGPAQRQPPALPACPAVHGGLVGQAVAQHRLLQRL--------- 74 E L H A+ + G +PPAL PA V A + L + Sbjct: 67 ERLFHRQDALWISTSSAGTGGAEPPALSPAPASPARPVSPAPGRRLSLWAVPPGPPLSGG 126 Query: 75 --------GSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGD 126 G+P RR + L W P GR G G PG++ P PG+G Sbjct: 127 LSPDPKPGGAPTSSRRPL---LSSPSWGGPEPEGRAGG--------GIPGSSSPHPGTGS 175 Query: 127 ASALAGGPRPVSR-----DTSSARSGACCGCSRANSQYW---------RASSRAAATACN 172 P P + TS A++G G S W + S +A T + Sbjct: 176 RRLKVAPPPPAPKPCKTVTTSGAKAGGGKGAGSRLS--WPESEGKPRVKGSKSSAGTGAS 233 Query: 173 SQNSLQPRGAAAGEAEGAEEGEEGCRAG 200 + A G + + G G AG Sbjct: 234 VSAAATAAAAGGGGSTASTSGGVGAGAG 261 >gi|71274172 ankyrin repeat domain 56 [Homo sapiens] Length = 793 Score = 37.0 bits (84), Expect = 0.012 Identities = 53/197 (26%), Positives = 78/197 (39%), Gaps = 29/197 (14%) Query: 20 GLTYLGWVEELQHAVGAIGARGPAQRQPPALPACPAVHGGLVGQAVAQHRLLQRLGSPAE 79 G Y+ + +G G + P R+PPA A P+ G A R +R G P + Sbjct: 67 GTKYVVLKRRYRDLLGEEGLQRP--REPPA--AAPSAGGA----APCSPRGARR-GEPPQ 117 Query: 80 RRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGA-AGPGPGSGDASALAGGPRPVS 138 ++ RR RR+ E+ P G A +++ G PG+ + PG G S + G RP Sbjct: 118 QQP---RRRRREKEPEEEPAG-AAARAADAACNGLPGSDSRRAPGKGGGSKGSPGQRPPV 173 Query: 139 RDTSSARSGACCGCSRANSQ---YWRASSRAAATACNSQNSLQPRGAAAGEAE------- 188 ++A + A C+ A +Q W A +L P A A E Sbjct: 174 PAAAAAGAQARASCAAAKTQGRCCWECLQNNLAVLPGELGAL-PHSATAEEKPARALPAQ 232 Query: 189 ----GAEEGEEGCRAGP 201 + E EEG A P Sbjct: 233 DDRGASREREEGALAEP 249 >gi|239735519 SET binding factor 1 [Homo sapiens] Length = 1893 Score = 36.6 bits (83), Expect = 0.016 Identities = 35/125 (28%), Positives = 47/125 (37%), Gaps = 10/125 (8%) Query: 48 PALPACPAVHGGLVGQAVAQ-HRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASS 106 P +CP + + + + RL LG PAER + W R++ E P GRG SS Sbjct: 1663 PCYDSCPRAQPDAISRLLEELQRLETELGQPAERWKDTWDRVKAAQRLEGRPDGRGTPSS 1722 Query: 107 -------SELRALGRPGAAGPGPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQY 159 R+LG GP S + TS +R A S SQ+ Sbjct: 1723 LLVSTAPHHRRSLG--VYLQEGPVGSTLSLSLDSDQSSGSTTSGSRQAARRSTSTLYSQF 1780 Query: 160 WRASS 164 A S Sbjct: 1781 QTAES 1785 >gi|27436957 membrane associated guanylate kinase, WW and PDZ domain containing 2 [Homo sapiens] Length = 1455 Score = 36.6 bits (83), Expect = 0.016 Identities = 39/130 (30%), Positives = 49/130 (37%), Gaps = 21/130 (16%) Query: 72 QRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSSELRALGRPGAAGPGPGSGDASALA 131 QRLG ER R R + E+ PGG+G + GRP + PG A A A Sbjct: 1308 QRLGEQRERSASPQRAARPRL--EEAPGGQGRPEA------GRPASEARAPGLAAADA-A 1358 Query: 132 GGPRPVSRDTSSARSGACCGCSRANSQYWRASSRAAATACNSQNSLQPRGAAAGEAEGAE 191 R ++ A +G S+ R AA A G+ A EAEG Sbjct: 1359 DAARAGGKEAPRAAAG---------SELCRREGPGAAPAFAGPGG---GGSGALEAEGRA 1406 Query: 192 EGEEGCRAGP 201 G R GP Sbjct: 1407 GARAGPRPGP 1416 Score = 28.1 bits (61), Expect = 5.7 Identities = 29/95 (30%), Positives = 33/95 (34%), Gaps = 18/95 (18%) Query: 54 PAVHGGLVGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPG------GRGGASSS 107 PA G A A R G R L R+ +GPG G GG S Sbjct: 1343 PASEARAPGLAAADAADAARAGGKEAPRAAAGSELCRR----EGPGAAPAFAGPGGGGSG 1398 Query: 108 ELRALGR--------PGAAGPGPGSGDASALAGGP 134 L A GR PG PG +A+A GP Sbjct: 1399 ALEAEGRAGARAGPRPGPRPPGGAPARKAAVAPGP 1433 >gi|239755607 PREDICTED: hypothetical protein XP_002344620 [Homo sapiens] Length = 102 Score = 36.2 bits (82), Expect = 0.021 Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 10/69 (14%) Query: 76 SPAERRRKMWRRLRRKCWKEQGPG----GRGGASSSELRALGR----PGAAGPGPGSGDA 127 SP++ R R+R C + P G GGA ++ G PGAAGPGPG G A Sbjct: 18 SPSQASRGEGTRMR--CRSARSPSSHAAGGGGARRTKREERGHRGGGPGAAGPGPGLGRA 75 Query: 128 SALAGGPRP 136 A RP Sbjct: 76 EAKGRNRRP 84 >gi|58219064 Src homology 2 domain containing E [Homo sapiens] Length = 495 Score = 36.2 bits (82), Expect = 0.021 Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 14/82 (17%) Query: 98 PGGRGGASSSELRALGRPGAAGPGPGSGDASALAG--------GPRP--VSRDTSSARSG 147 PGG GG +LR G AGPGPG G ++ A GP+ +SRD+ Sbjct: 58 PGGGGG----KLRKNSEAGGAGPGPGKGRKNSAAELGSGRAGVGPKDSRLSRDSLQGLIQ 113 Query: 148 ACCGCSRANSQYWRASSRAAAT 169 A G R NS+ AT Sbjct: 114 AAAGKGRKNSRATEEEPHRGAT 135 >gi|238550210 Z-DNA binding protein 1 isoform c [Homo sapiens] Length = 354 Score = 35.8 bits (81), Expect = 0.028 Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 4/105 (3%) Query: 106 SSELRALGRP--GAAGPGPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRAS 163 S+E+R G P G A PGS SA A GP S + G A + ++ Sbjct: 194 SNEMRLHGVPSEGPAHIPPGSPPVSATAAGPE-ASFEARIPSPGTHPEGEAAQRIHMKSC 252 Query: 164 SRAAATACNSQN-SLQPRGAAAGEAEGAEEGEEGCRAGPFMAETQ 207 AT NS S+ P A G G+ EGE G AG A+TQ Sbjct: 253 FLEDATIGNSNKMSISPGVAGPGGVAGSGEGEPGEDAGRRPADTQ 297 >gi|238550208 Z-DNA binding protein 1 isoform b [Homo sapiens] Length = 428 Score = 35.8 bits (81), Expect = 0.028 Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 4/105 (3%) Query: 106 SSELRALGRP--GAAGPGPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRAS 163 S+E+R G P G A PGS SA A GP S + G A + ++ Sbjct: 268 SNEMRLHGVPSEGPAHIPPGSPPVSATAAGPE-ASFEARIPSPGTHPEGEAAQRIHMKSC 326 Query: 164 SRAAATACNSQN-SLQPRGAAAGEAEGAEEGEEGCRAGPFMAETQ 207 AT NS S+ P A G G+ EGE G AG A+TQ Sbjct: 327 FLEDATIGNSNKMSISPGVAGPGGVAGSGEGEPGEDAGRRPADTQ 371 >gi|238550206 Z-DNA binding protein 1 isoform a [Homo sapiens] Length = 429 Score = 35.8 bits (81), Expect = 0.028 Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 4/105 (3%) Query: 106 SSELRALGRP--GAAGPGPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANSQYWRAS 163 S+E+R G P G A PGS SA A GP S + G A + ++ Sbjct: 269 SNEMRLHGVPSEGPAHIPPGSPPVSATAAGPE-ASFEARIPSPGTHPEGEAAQRIHMKSC 327 Query: 164 SRAAATACNSQN-SLQPRGAAAGEAEGAEEGEEGCRAGPFMAETQ 207 AT NS S+ P A G G+ EGE G AG A+TQ Sbjct: 328 FLEDATIGNSNKMSISPGVAGPGGVAGSGEGEPGEDAGRRPADTQ 372 >gi|194363768 homeobox D9 [Homo sapiens] Length = 352 Score = 35.8 bits (81), Expect = 0.028 Identities = 42/157 (26%), Positives = 53/157 (33%), Gaps = 21/157 (13%) Query: 48 PALPACPAVHGGLVGQAVAQHRLLQRLGSPAERRRKMWRRLRRKCWKEQGPGGRGGASSS 107 P+ P A GL V L P R W E PG GGA Sbjct: 83 PSQPPAAAAMSGLYHPYVPPPPLAASASEPGRYVRS---------WMEPLPGFPGGAGGG 133 Query: 108 ELRALGRPGAAGPGPG-SGDASALAGGPRPVSR----------DTSSARSGACCGCSRAN 156 G PG GP PG SG A+ G +P +R TSS+ + R Sbjct: 134 GGGGGGGPG-RGPSPGPSGPANGRHYGIKPETRAAPAPATAASTTSSSSTSLSSSSKRTE 192 Query: 157 SQYWRASSRAAATACNSQNSLQPRGAAAGEAEGAEEG 193 R S ++ + + LQ + AAA G G Sbjct: 193 CSVARESQGSSGPEFSCNSFLQEKAAAATGGTGPGAG 229 >gi|4758156 diacylglycerol kinase, iota [Homo sapiens] Length = 1065 Score = 35.8 bits (81), Expect = 0.028 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 6/103 (5%) Query: 98 PGGRGGASSSELRALGRPGAAGPGPGSGDASALAGGPRPVSRDTSSARSGACCGCSRANS 157 P RG A + A GP G+ A + A G ++ +S+ G S + Sbjct: 14 PAARGPARAPAAAAAAAASPPGPCSGAACAPSAAAGAGAMNPSSSAGEEKGATGGSSS-- 71 Query: 158 QYWRASSRAAATACNSQNSLQPRGAAAGEAEGAEEGEEGCRAG 200 + S A + ++ PRGA + A GA +E AG Sbjct: 72 ----SGSGAGSCCLGAEGGADPRGAGSAAAAGAAALDEPAAAG 110 >gi|110227617 centaurin, gamma 3 isoform b [Homo sapiens] Length = 396 Score = 35.4 bits (80), Expect = 0.036 Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 3/39 (7%) Query: 98 PGGRGGASSSELRALGRPGAAGPGP--GSGDASALAGGP 134 PGG GGA++ +L G+ G AGPG G G + LAGGP Sbjct: 20 PGG-GGAAAQQLVCGGQFGGAGPGAGGGGGPSQQLAGGP 57 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.131 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,552,976 Number of Sequences: 37866 Number of extensions: 604646 Number of successful extensions: 5959 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 492 Number of HSP's that attempted gapping in prelim test: 4937 Number of HSP's gapped (non-prelim): 1349 length of query: 212 length of database: 18,247,518 effective HSP length: 98 effective length of query: 114 effective length of database: 14,536,650 effective search space: 1657178100 effective search space used: 1657178100 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.