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Search of human proteins with 239755805
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755805 PREDICTED: hypothetical protein [Homo sapiens]
(435 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755805 PREDICTED: hypothetical protein [Homo sapiens] 890 0.0
gi|239755799 PREDICTED: hypothetical protein [Homo sapiens] 263 2e-70
gi|239750301 PREDICTED: hypothetical protein [Homo sapiens] 263 2e-70
gi|239744612 PREDICTED: hypothetical protein XP_002343207 [Homo ... 263 2e-70
gi|239746020 PREDICTED: hypothetical protein XP_002344182 [Homo ... 62 8e-10
gi|239754209 PREDICTED: hypothetical protein [Homo sapiens] 55 1e-07
gi|239748740 PREDICTED: hypothetical protein [Homo sapiens] 55 1e-07
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 32 1.1
gi|30102940 otopetrin 3 [Homo sapiens] 31 1.9
gi|221219024 pleckstrin homology-like domain, family B, member 1... 31 2.5
gi|38424073 pleckstrin homology-like domain, family B, member 1 ... 31 2.5
gi|110611246 xylosyltransferase II [Homo sapiens] 31 2.5
gi|239747637 PREDICTED: hypothetical protein XP_002347915, parti... 31 2.5
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 31 2.5
gi|239746383 PREDICTED: hypothetical protein XP_002343740 [Homo ... 30 3.3
gi|253795488 hypothetical protein LOC55793 isoform 3 [Homo sapiens] 30 5.6
gi|31377841 hypothetical protein LOC55793 isoform 1 [Homo sapiens] 30 5.6
gi|22538422 activating transcription factor 2 [Homo sapiens] 30 5.6
gi|13027600 hypothetical protein LOC65990 [Homo sapiens] 30 5.6
gi|239751893 PREDICTED: hypothetical protein XP_002348037 [Homo ... 29 7.3
gi|113417486 PREDICTED: hypothetical protein [Homo sapiens] 29 7.3
gi|239740777 PREDICTED: hypothetical protein [Homo sapiens] 29 7.3
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 29 9.6
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 29 9.6
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 29 9.6
gi|22208971 high mobility group AT-hook 1 isoform a [Homo sapiens] 29 9.6
gi|22208967 high mobility group AT-hook 1 isoform a [Homo sapiens] 29 9.6
gi|15011844 selenophosphate synthetase 2 [Homo sapiens] 29 9.6
gi|5032055 reticulon 2 isoform A [Homo sapiens] 29 9.6
gi|46255005 reticulon 2 isoform B [Homo sapiens] 29 9.6
>gi|239755805 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 890 bits (2300), Expect = 0.0
Identities = 435/435 (100%), Positives = 435/435 (100%)
Query: 1 MARVTFHHLVGWLKASIGDLCYSKLFVVGFLSRDDRGICGQREVDAGVGHQVGLEFCQVN 60
MARVTFHHLVGWLKASIGDLCYSKLFVVGFLSRDDRGICGQREVDAGVGHQVGLEFCQVN
Sbjct: 1 MARVTFHHLVGWLKASIGDLCYSKLFVVGFLSRDDRGICGQREVDAGVGHQVGLEFCQVN 60
Query: 61 IQGSIKSQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGG 120
IQGSIKSQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGG
Sbjct: 61 IQGSIKSQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGG 120
Query: 121 EDGVVGLNYSCGNLGRRYYTYQLANSVQHEVNDLLANGVVPSGIVIGSIFLACDELLRVE 180
EDGVVGLNYSCGNLGRRYYTYQLANSVQHEVNDLLANGVVPSGIVIGSIFLACDELLRVE
Sbjct: 121 EDGVVGLNYSCGNLGRRYYTYQLANSVQHEVNDLLANGVVPSGIVIGSIFLACDELLRVE 180
Query: 181 ELAVSAIYKHCPGHMLASTRFTEEGVEGIISSPNGLVTWHLAIGLDAVFQAVELPAGIAN 240
ELAVSAIYKHCPGHMLASTRFTEEGVEGIISSPNGLVTWHLAIGLDAVFQAVELPAGIAN
Sbjct: 181 ELAVSAIYKHCPGHMLASTRFTEEGVEGIISSPNGLVTWHLAIGLDAVFQAVELPAGIAN 240
Query: 241 LDTSLANVDGDALTLWEEERKMSGLAGSQRPLTYPPLSPGHVGERTEVSTGRREQAGRLP 300
LDTSLANVDGDALTLWEEERKMSGLAGSQRPLTYPPLSPGHVGERTEVSTGRREQAGRLP
Sbjct: 241 LDTSLANVDGDALTLWEEERKMSGLAGSQRPLTYPPLSPGHVGERTEVSTGRREQAGRLP 300
Query: 301 RPRWVRGRQVGKTPARGSSRIVAVPFLGPSSSPHFPFLCTHLTGASAIICLLRVTVIQWE 360
RPRWVRGRQVGKTPARGSSRIVAVPFLGPSSSPHFPFLCTHLTGASAIICLLRVTVIQWE
Sbjct: 301 RPRWVRGRQVGKTPARGSSRIVAVPFLGPSSSPHFPFLCTHLTGASAIICLLRVTVIQWE 360
Query: 361 SLVVPPFSTYGCGPQEDDGLRFCSGASPVAGNCNPQDDARAQLPSFYVAEFMLPCTEQTL 420
SLVVPPFSTYGCGPQEDDGLRFCSGASPVAGNCNPQDDARAQLPSFYVAEFMLPCTEQTL
Sbjct: 361 SLVVPPFSTYGCGPQEDDGLRFCSGASPVAGNCNPQDDARAQLPSFYVAEFMLPCTEQTL 420
Query: 421 SLTQPCPSPCPVIPE 435
SLTQPCPSPCPVIPE
Sbjct: 421 SLTQPCPSPCPVIPE 435
>gi|239755799 PREDICTED: hypothetical protein [Homo sapiens]
Length = 146
Score = 263 bits (672), Expect = 2e-70
Identities = 128/130 (98%), Positives = 129/130 (99%)
Query: 1 MARVTFHHLVGWLKASIGDLCYSKLFVVGFLSRDDRGICGQREVDAGVGHQVGLEFCQVN 60
MARVTFHHLVGWLKASIGDLCY KLF+VGFLSRDDRGICGQREVDAGVGHQVGLEFCQVN
Sbjct: 1 MARVTFHHLVGWLKASIGDLCYRKLFMVGFLSRDDRGICGQREVDAGVGHQVGLEFCQVN 60
Query: 61 IQGSIKSQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGG 120
IQGSIKSQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGG
Sbjct: 61 IQGSIKSQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGG 120
Query: 121 EDGVVGLNYS 130
EDGVVGLNYS
Sbjct: 121 EDGVVGLNYS 130
>gi|239750301 PREDICTED: hypothetical protein [Homo sapiens]
Length = 146
Score = 263 bits (672), Expect = 2e-70
Identities = 128/130 (98%), Positives = 129/130 (99%)
Query: 1 MARVTFHHLVGWLKASIGDLCYSKLFVVGFLSRDDRGICGQREVDAGVGHQVGLEFCQVN 60
MARVTFHHLVGWLKASIGDLCY KLF+VGFLSRDDRGICGQREVDAGVGHQVGLEFCQVN
Sbjct: 1 MARVTFHHLVGWLKASIGDLCYRKLFMVGFLSRDDRGICGQREVDAGVGHQVGLEFCQVN 60
Query: 61 IQGSIKSQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGG 120
IQGSIKSQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGG
Sbjct: 61 IQGSIKSQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGG 120
Query: 121 EDGVVGLNYS 130
EDGVVGLNYS
Sbjct: 121 EDGVVGLNYS 130
>gi|239744612 PREDICTED: hypothetical protein XP_002343207 [Homo
sapiens]
Length = 146
Score = 263 bits (672), Expect = 2e-70
Identities = 128/130 (98%), Positives = 129/130 (99%)
Query: 1 MARVTFHHLVGWLKASIGDLCYSKLFVVGFLSRDDRGICGQREVDAGVGHQVGLEFCQVN 60
MARVTFHHLVGWLKASIGDLCY KLF+VGFLSRDDRGICGQREVDAGVGHQVGLEFCQVN
Sbjct: 1 MARVTFHHLVGWLKASIGDLCYRKLFMVGFLSRDDRGICGQREVDAGVGHQVGLEFCQVN 60
Query: 61 IQGSIKSQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGG 120
IQGSIKSQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGG
Sbjct: 61 IQGSIKSQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGG 120
Query: 121 EDGVVGLNYS 130
EDGVVGLNYS
Sbjct: 121 EDGVVGLNYS 130
>gi|239746020 PREDICTED: hypothetical protein XP_002344182 [Homo
sapiens]
Length = 162
Score = 62.4 bits (150), Expect = 8e-10
Identities = 43/154 (27%), Positives = 80/154 (51%)
Query: 1 MARVTFHHLVGWLKASIGDLCYSKLFVVGFLSRDDRGICGQREVDAGVGHQVGLEFCQVN 60
MAR+ H V ++ +G+L + + V+ + +R EV A GH V + QV+
Sbjct: 1 MARIAGGHHVPGVEHLLGELGHGQGPVLLAAAAGERREARHEEVQAREGHHVHRQLAQVS 60
Query: 61 IQGSIKSQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGG 120
I+ + ++Q D H ++ V+V VG ++ + DVI+ L+V G + +L V
Sbjct: 61 IELAREAQRGGDPTHGGGHQVVEVPVGGRCQLQSAEADVIERLVVDAVGLVCILHQLVHR 120
Query: 121 EDGVVGLNYSCGNLGRRYYTYQLANSVQHEVNDL 154
+ G+VGL++ +LGR + + ++V+ + DL
Sbjct: 121 QCGIVGLHHRVRHLGRGHDAEGVHDAVRELLTDL 154
>gi|239754209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 55.5 bits (132), Expect = 1e-07
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 7 HHLVGWLKASIGDLCYSKLFVVGFLSRDDRGICGQREVDAGVGHQVGLEFCQVNIQGSIK 66
HH++G ++ +G+L + + V+ G EV A GH V + QV +Q + +
Sbjct: 155 HHVLG-VEHLLGELGHRERPVLLAAPAGQGREAGHEEVQAREGHHVHRQLAQVCVQLARE 213
Query: 67 SQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGGEDGVVG 126
+Q D H ++ V+V VG ++ + DVI GL++ G I V V E GVVG
Sbjct: 214 AQAGGDPAHGGRHQVVEVPVGGGGQLQGAEADVIQGLVINGVGFICVFHQLVDREGGVVG 273
Query: 127 LNY 129
L++
Sbjct: 274 LHH 276
>gi|239748740 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 55.5 bits (132), Expect = 1e-07
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 7 HHLVGWLKASIGDLCYSKLFVVGFLSRDDRGICGQREVDAGVGHQVGLEFCQVNIQGSIK 66
HH++G ++ +G+L + + V+ G EV A GH V + QV +Q + +
Sbjct: 155 HHVLG-VEHLLGELGHRERPVLLAAPAGQGREAGHEEVQAREGHHVHRQLAQVCVQLARE 213
Query: 67 SQGSSDGGHNLANKAVKVSVGWALDIEVSTTDVIDGLIVYHEGTIRVLQGGVGGEDGVVG 126
+Q D H ++ V+V VG ++ + DVI GL++ G I V V E GVVG
Sbjct: 214 AQAGGDPAHGGRHQVVEVPVGGGGQLQGAEADVIQGLVINGVGFICVFHQLVDREGGVVG 273
Query: 127 LNY 129
L++
Sbjct: 274 LHH 276
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 32.0 bits (71), Expect = 1.1
Identities = 41/172 (23%), Positives = 64/172 (37%), Gaps = 24/172 (13%)
Query: 265 LAGSQRPLTYPPLSPGHVGERTEVSTGRREQAGRLPRPRWVR---GRQVGKTPARGSSRI 321
L G ++P TY P+S ++ + G LPR W+ R G +RGS
Sbjct: 510 LGGVKKP-TYDPVSEDQDPLSSDFKRLGLRKPG-LPRGLWLAKPSARVPGTKASRGSGAE 567
Query: 322 VAVPFLG-----PSSSPHFPFLCTHLTGASAIIC--------------LLRVTVIQWESL 362
V + G P+ P P L A +++ L V+ W++
Sbjct: 568 VTLIDFGEEPVVPALRPCAPSLAQLAMDACSLLDETPPQSPTRALPRPLHPTPVVDWDAR 627
Query: 363 VVPPFSTYGCGPQEDDGLRFCSGASPVAGNCNPQDDARAQLPSFYVAEFMLP 414
+PP Y Q++D CS S + G P ++ Q +V E P
Sbjct: 628 PLPPPPAYDDVAQDEDDFEICSINSTLVGAGVPAGPSQGQTNYAFVPEQARP 679
>gi|30102940 otopetrin 3 [Homo sapiens]
Length = 596
Score = 31.2 bits (69), Expect = 1.9
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 187 IYKHCPGHMLASTRFTEEGVEGIISSPNGLVTWHLAIGLDAVFQAVELPAGIANLDTSLA 246
++KHC + T FT G+ +++ L+ W LA+ D++ + +E GI ++ S
Sbjct: 213 LWKHCKDCVRVQTNFTRCGL--MLTLATNLLLWVLAVTNDSMHREIEAELGIL-MEKSTG 269
Query: 247 NVDGDALTL 255
N L L
Sbjct: 270 NETNTCLCL 278
>gi|221219024 pleckstrin homology-like domain, family B, member 1
isoform a [Homo sapiens]
Length = 1377
Score = 30.8 bits (68), Expect = 2.5
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Query: 253 LTLWEEERKMSGLA---GSQRPLTYPPLSPGHVGERTEVSTGRREQAGRLPRPRWVRGRQ 309
L W +E M+GL + P + PP P + +V + + P PR G
Sbjct: 923 LEQWYQEL-MAGLGTGPAAASPHSSPPPLPAKASRQLQVYRSKMDGEATSPLPRTRSGPL 981
Query: 310 VGKTPARGSSRIVAVPFLGPSSSPHFPFLCTHLTGA 345
+ + SS ++V LG S SP L + TG+
Sbjct: 982 PSSSGSSSSSSQLSVATLGRSPSPKSALLTQNGTGS 1017
>gi|38424073 pleckstrin homology-like domain, family B, member 1
isoform a [Homo sapiens]
Length = 1377
Score = 30.8 bits (68), Expect = 2.5
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
Query: 253 LTLWEEERKMSGLA---GSQRPLTYPPLSPGHVGERTEVSTGRREQAGRLPRPRWVRGRQ 309
L W +E M+GL + P + PP P + +V + + P PR G
Sbjct: 923 LEQWYQEL-MAGLGTGPAAASPHSSPPPLPAKASRQLQVYRSKMDGEATSPLPRTRSGPL 981
Query: 310 VGKTPARGSSRIVAVPFLGPSSSPHFPFLCTHLTGA 345
+ + SS ++V LG S SP L + TG+
Sbjct: 982 PSSSGSSSSSSQLSVATLGRSPSPKSALLTQNGTGS 1017
>gi|110611246 xylosyltransferase II [Homo sapiens]
Length = 865
Score = 30.8 bits (68), Expect = 2.5
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Query: 243 TSLANVDGDALTLWEE---ERKMSGLAGSQRPLTYPPLSPGHVGERTEVSTGRREQAGRL 299
T+LA + L +W E +G G QR PL PG + T+ S GRR GR
Sbjct: 20 TALAILLLQGLVVWSFSGLEEDEAGEKGRQRKPR--PLDPGEGSKDTDSSAGRRGSTGR- 76
Query: 300 PRPRWVRGR------QVGKTPARGSSRIVAVPFLGPSSSPHFPFLCTHLTGASA 347
RW RGR V K +SR A + P+ P P +L+GA+A
Sbjct: 77 RHGRW-RGRAESPGVPVAKVVRAVTSRQRASRRVPPAPPPEAPGR-QNLSGAAA 128
>gi|239747637 PREDICTED: hypothetical protein XP_002347915, partial
[Homo sapiens]
Length = 346
Score = 30.8 bits (68), Expect = 2.5
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 15/97 (15%)
Query: 299 LPRPRWVRGRQVGKTPARGSSRIVAVPFLGPSSSPHFPFLCTHLTGASAIICLLRVTVIQ 358
LP PR Q ++ G ++A P SS FLC LT S +IC +R VI
Sbjct: 228 LPVPRNPLANQTVRSALAGHWDLLASGV--PPSSCAAVFLCLFLTECSHVICGIRSVVIN 285
Query: 359 WESLVVPPFSTYGCGPQEDDGLRFCSGASPVAGNCNP 395
+T GC ED+ P N +P
Sbjct: 286 ---------NTVGCVEAEDEAF----SIQPSGQNASP 309
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 30.8 bits (68), Expect = 2.5
Identities = 40/169 (23%), Positives = 63/169 (37%), Gaps = 24/169 (14%)
Query: 268 SQRPLTYPPLSPGHVGERTEVSTGRREQAGRLPRPRWVR---GRQVGKTPARGSSRIVAV 324
+Q+P TY P+S ++ + G LPR W+ R G +RGS V +
Sbjct: 591 TQKP-TYDPVSEDQDPLSSDFKRLGLRKPG-LPRGLWLAKPSARVPGTKASRGSGAEVTL 648
Query: 325 PFLG-----PSSSPHFPFLCTHLTGASAIIC--------------LLRVTVIQWESLVVP 365
G P+ P P L A +++ L V+ W++ +P
Sbjct: 649 IDFGEEPVVPALRPCAPSLAQLAMDACSLLDETPPQSPTRALPRPLHPTPVVDWDARPLP 708
Query: 366 PFSTYGCGPQEDDGLRFCSGASPVAGNCNPQDDARAQLPSFYVAEFMLP 414
P Y Q++D CS S + G P ++ Q +V E P
Sbjct: 709 PPPAYDDVAQDEDDFEICSINSTLVGAGVPAGPSQGQTNYAFVPEQARP 757
>gi|239746383 PREDICTED: hypothetical protein XP_002343740 [Homo
sapiens]
Length = 521
Score = 30.4 bits (67), Expect = 3.3
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 285 RTEVSTGRREQAGRLPRPRWVRGRQVGKTPARGSSRIVAVPFLGPSSSPHFPFLCTHLTG 344
++ + GRR+ RP +R + G+T AR +++ + F+G S FL T+ G
Sbjct: 75 KSTTARGRRKS-----RPPTMREHEDGRTHARTHAKVPSCTFIGVS------FLVTNKMG 123
Query: 345 ASAI 348
ASAI
Sbjct: 124 ASAI 127
>gi|253795488 hypothetical protein LOC55793 isoform 3 [Homo sapiens]
Length = 517
Score = 29.6 bits (65), Expect = 5.6
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 360 ESLVVPPFSTYGCGPQEDDGLRFCSGASPVAGNCNPQDD-ARAQLPSFYVAEFMLPCTEQ 418
E+ PP T G P E + +R CS + PQ R P FY +++ EQ
Sbjct: 120 EASSAPPGPTLGTLP-EVETIRACSMPQEL-----PQSPRTRQPEPDFYCVKWIPWKGEQ 173
Query: 419 TLSLTQPCPSPCPVI 433
T +TQ PCP++
Sbjct: 174 TPIITQSTNGPCPLL 188
>gi|31377841 hypothetical protein LOC55793 isoform 1 [Homo sapiens]
Length = 469
Score = 29.6 bits (65), Expect = 5.6
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 360 ESLVVPPFSTYGCGPQEDDGLRFCSGASPVAGNCNPQDD-ARAQLPSFYVAEFMLPCTEQ 418
E+ PP T G P E + +R CS + PQ R P FY +++ EQ
Sbjct: 72 EASSAPPGPTLGTLP-EVETIRACSMPQEL-----PQSPRTRQPEPDFYCVKWIPWKGEQ 125
Query: 419 TLSLTQPCPSPCPVI 433
T +TQ PCP++
Sbjct: 126 TPIITQSTNGPCPLL 140
>gi|22538422 activating transcription factor 2 [Homo sapiens]
Length = 505
Score = 29.6 bits (65), Expect = 5.6
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 238 IANLDTSLANVDGDALTLWEEERKMSGLAGSQRPLTYPPLSPGHVGERTEVSTGRREQA 296
+ N DT + G T EE R S L T P SP H +T+ ++GRR +A
Sbjct: 289 VTNGDTVKGHGSGLVRTQSEESRPQS-LQQPATSTTETPASPAHTTPQTQSTSGRRRRA 346
>gi|13027600 hypothetical protein LOC65990 [Homo sapiens]
Length = 235
Score = 29.6 bits (65), Expect = 5.6
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 15/64 (23%)
Query: 285 RTEVSTGRREQAGRLPRPRWVRGRQVGK---------TPARG------SSRIVAVPFLGP 329
RTE+ G R +GR P P W VG+ P G SSRI GP
Sbjct: 162 RTELPAGARVVSGRFPLPTWQPVTAVGEGLDRVWAYDVPEGGQAGEAASSRIPIQAAPGP 221
Query: 330 SSSP 333
SS+P
Sbjct: 222 SSAP 225
>gi|239751893 PREDICTED: hypothetical protein XP_002348037 [Homo
sapiens]
Length = 521
Score = 29.3 bits (64), Expect = 7.3
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 11/64 (17%)
Query: 285 RTEVSTGRREQAGRLPRPRWVRGRQVGKTPARGSSRIVAVPFLGPSSSPHFPFLCTHLTG 344
++ + GRR+ RP +R G+T AR +++ + F+G S FL T+ G
Sbjct: 75 KSTTARGRRKS-----RPPTMREHADGRTHARTHAKVPSCTFIGVS------FLVTNKMG 123
Query: 345 ASAI 348
ASAI
Sbjct: 124 ASAI 127
>gi|113417486 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1612
Score = 29.3 bits (64), Expect = 7.3
Identities = 52/203 (25%), Positives = 77/203 (37%), Gaps = 32/203 (15%)
Query: 44 VDAGVGHQVGLEFCQVNIQGSIKSQG-SSDGGHNLANKAVKVSVGWALDIEV-STTDVID 101
V A VG VGL FC N+ ++ G GH+ S+G L++ + S T
Sbjct: 1419 VVAAVGLSVGLSFCLRNLFFPLRYCGIYYPHGHS-------HSLGLDLNLGLGSGTFHSL 1471
Query: 102 GLIVYHEGTIRVLQGGVGGEDGVVGLNYSCGNLGRRYYTYQLANSVQHEVNDLLANGVVP 161
G + H G + + GG G VG S + G Y L ++ E
Sbjct: 1472 GNALVHGGELEMGHGGTHGFGYGVGHGLSHIH-GDGYGPLDLTQRMELEAT--------- 1521
Query: 162 SGIVIGSI------FLACDELLRVEELAVSAIYKHCPGHMLASTRFTEEGVEGIISSPNG 215
GIVIG + + CD R+ +HCPG S+ T +++P G
Sbjct: 1522 RGIVIGPVINPTFQWNHCDHPSRINHTIQRNYCEHCPGPTTPSSGIT-------MTTPPG 1574
Query: 216 LVTWHLAIGLDAVFQAVELPAGI 238
T I + + P+GI
Sbjct: 1575 STTLSSRITVTTLPGPTTPPSGI 1597
>gi|239740777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1612
Score = 29.3 bits (64), Expect = 7.3
Identities = 52/203 (25%), Positives = 76/203 (37%), Gaps = 32/203 (15%)
Query: 44 VDAGVGHQVGLEFCQVNIQGSIKSQGSS-DGGHNLANKAVKVSVGWALDIEV-STTDVID 101
V A VG VGL FC ++ ++ G GH+ S+G LD+ + S T
Sbjct: 1419 VVAAVGLSVGLSFCLRDLFFPLRYCGIYYPHGHSH-------SLGLDLDLGLGSGTFHSL 1471
Query: 102 GLIVYHEGTIRVLQGGVGGEDGVVGLNYSCGNLGRRYYTYQLANSVQHEVNDLLANGVVP 161
G + H G + + GG G VG S + G Y L ++ E
Sbjct: 1472 GNALVHGGELEMGHGGTHGFGYGVGHGLSHIH-GDGYGPLDLTQRMELEAT--------- 1521
Query: 162 SGIVIGSIFLA------CDELLRVEELAVSAIYKHCPGHMLASTRFTEEGVEGIISSPNG 215
GIVIG + CD R+ +HCPG S+ T +++P G
Sbjct: 1522 RGIVIGPVINPTFQWNHCDHPSRINHTIQRNYCEHCPGPTTPSSGIT-------MTTPPG 1574
Query: 216 LVTWHLAIGLDAVFQAVELPAGI 238
T I + + P+GI
Sbjct: 1575 STTLSSRITVTTLPGPTTPPSGI 1597
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 28.9 bits (63), Expect = 9.6
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 258 EERKM----SGLAGSQRPLTYPPLSPGHVGERTEVSTGRREQAGRLPRPR---WVRGRQV 310
EER++ G A P+ P +PG GER R+ G PR G +
Sbjct: 253 EERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRG 312
Query: 311 GKTP-ARGSS 319
G TP ARGSS
Sbjct: 313 GVTPRARGSS 322
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 28.9 bits (63), Expect = 9.6
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 258 EERKM----SGLAGSQRPLTYPPLSPGHVGERTEVSTGRREQAGRLPRPR---WVRGRQV 310
EER++ G A P+ P +PG GER R+ G PR G +
Sbjct: 347 EERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRG 406
Query: 311 GKTP-ARGSS 319
G TP ARGSS
Sbjct: 407 GVTPRARGSS 416
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 28.9 bits (63), Expect = 9.6
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 258 EERKM----SGLAGSQRPLTYPPLSPGHVGERTEVSTGRREQAGRLPRPR---WVRGRQV 310
EER++ G A P+ P +PG GER R+ G PR G +
Sbjct: 347 EERRVRGRRQGCALGSPPIPAGPAAPGRAGERRAARQWRKRGGGPGVSPREGAQGEGVRG 406
Query: 311 GKTP-ARGSS 319
G TP ARGSS
Sbjct: 407 GVTPRARGSS 416
>gi|22208971 high mobility group AT-hook 1 isoform a [Homo sapiens]
Length = 107
Score = 28.9 bits (63), Expect = 9.6
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 257 EEERKMSGLAGSQRPLTYPPLSPGHVGERTEVSTGRREQAGRLPRPRWVRGRQVG 311
++E+ + G RP PP+SPG G +++ +P P+ RGR G
Sbjct: 15 KQEKDGTEKRGRGRPRKQPPVSPG------TALVGSQKEPSEVPTPKRPRGRPKG 63
>gi|22208967 high mobility group AT-hook 1 isoform a [Homo sapiens]
Length = 107
Score = 28.9 bits (63), Expect = 9.6
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 257 EEERKMSGLAGSQRPLTYPPLSPGHVGERTEVSTGRREQAGRLPRPRWVRGRQVG 311
++E+ + G RP PP+SPG G +++ +P P+ RGR G
Sbjct: 15 KQEKDGTEKRGRGRPRKQPPVSPG------TALVGSQKEPSEVPTPKRPRGRPKG 63
>gi|15011844 selenophosphate synthetase 2 [Homo sapiens]
Length = 448
Score = 28.9 bits (63), Expect = 9.6
Identities = 18/45 (40%), Positives = 21/45 (46%)
Query: 258 EERKMSGLAGSQRPLTYPPLSPGHVGERTEVSTGRREQAGRLPRP 302
+E + LAG RP PPL G VG + E S AG P P
Sbjct: 66 QEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSP 110
>gi|5032055 reticulon 2 isoform A [Homo sapiens]
Length = 545
Score = 28.9 bits (63), Expect = 9.6
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 257 EEERKMSGLAGSQRPLTYPPLS-PGHVGERTEVSTGRREQAGRLPRPRWVRGRQVGK--- 312
+EE S G+ R LT+ ++ G VG S GRR+ R PRP +GR V +
Sbjct: 47 DEEETTSQDWGTPRELTFSYIAFDGVVG-----SGGRRDSTARRPRP---QGRSVSEPRD 98
Query: 313 ---TPARGSSRIVAVPFLGPSSSP 333
P+ G S + ++P L S P
Sbjct: 99 QHPQPSLGDS-LESIPSLSQSPEP 121
>gi|46255005 reticulon 2 isoform B [Homo sapiens]
Length = 472
Score = 28.9 bits (63), Expect = 9.6
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 257 EEERKMSGLAGSQRPLTYPPLS-PGHVGERTEVSTGRREQAGRLPRPRWVRGRQVGK--- 312
+EE S G+ R LT+ ++ G VG S GRR+ R PRP +GR V +
Sbjct: 47 DEEETTSQDWGTPRELTFSYIAFDGVVG-----SGGRRDSTARRPRP---QGRSVSEPRD 98
Query: 313 ---TPARGSSRIVAVPFLGPSSSP 333
P+ G S + ++P L S P
Sbjct: 99 QHPQPSLGDS-LESIPSLSQSPEP 121
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,126,430
Number of Sequences: 37866
Number of extensions: 881885
Number of successful extensions: 1904
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1886
Number of HSP's gapped (non-prelim): 34
length of query: 435
length of database: 18,247,518
effective HSP length: 105
effective length of query: 330
effective length of database: 14,271,588
effective search space: 4709624040
effective search space used: 4709624040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.