Guide to the Human Genome
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Name: LOC100288366 Sequence: fasta or formatted (146aa) NCBI GI: 239744612
Description:

PREDICTED: hypothetical protein XP_002343207

Not currently referenced in the text

Other entries for this name:
alt mRNA {146aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5          8           1
 C cysteine            2.1          3           1
 D aspartate           6.8         10           2
 E glutamate           3.4          5           1
 F phenylalanine       4.1          6           1
 G glycine            14.4         21           2
 H histidine           3.4          5           2
 I isoleucine          6.2          9           1
 K lysine              4.8          7           1
 L leucine             8.9         13           1
 M methionine          1.4          2           1
 N asparagine          2.7          4           1
 P proline             0.7          1           1
 Q glutamine           4.1          6           1
 R arginine            4.1          6           1
 S serine              7.5         11           2
 T threonine           2.7          4           2
 V valine             13.0         19           2
 W tryptophan          1.4          2           1
 Y tyrosine            2.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein XP_002343207 
LOC100293929          1.000   PREDICTED: hypothetical protein 
LOC100288366          1.000   PREDICTED: hypothetical protein 
LOC100293962          0.875   PREDICTED: hypothetical protein 
LOC100133479          0.118   PREDICTED: hypothetical protein 
LOC100133479          0.118   PREDICTED: hypothetical protein 
LOC100289263          0.103   PREDICTED: hypothetical protein XP_002344182 
C1orf190              0.011   hypothetical protein LOC541468 
LOC100289979          0.011   PREDICTED: hypothetical protein XP_002346878 
LOC100289273          0.011   PREDICTED: hypothetical protein XP_002342720 
SERPINF2              0.007   alpha-2-plasmin inhibitor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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