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Search of human proteins with 239755509
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
(344 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] 689 0.0
gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] 689 0.0
gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ... 689 0.0
gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo ... 51 2e-06
gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 49 7e-06
gi|239750586 PREDICTED: hypothetical protein XP_002347439 [Homo ... 49 9e-06
gi|239744883 PREDICTED: hypothetical protein XP_002344274 [Homo ... 49 9e-06
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 47 2e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 47 3e-05
gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 46 4e-05
gi|157676331 hyaluronan binding protein 4 [Homo sapiens] 46 6e-05
gi|169164783 PREDICTED: hypothetical protein [Homo sapiens] 45 9e-05
gi|169163482 PREDICTED: hypothetical protein [Homo sapiens] 45 9e-05
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 45 1e-04
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 44 2e-04
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 44 2e-04
gi|239753916 PREDICTED: hypothetical protein XP_002345830 [Homo ... 44 3e-04
gi|239748460 PREDICTED: hypothetical protein [Homo sapiens] 44 3e-04
gi|239742421 PREDICTED: hypothetical protein XP_002342511 [Homo ... 44 3e-04
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 44 3e-04
gi|239751491 PREDICTED: hypothetical protein XP_002347883 [Homo ... 43 5e-04
gi|239745989 PREDICTED: hypothetical protein XP_002344188 [Homo ... 43 5e-04
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 42 6e-04
gi|169194607 PREDICTED: hypothetical protein [Homo sapiens] 42 6e-04
gi|239754911 PREDICTED: hypothetical protein [Homo sapiens] 42 6e-04
gi|169201944 PREDICTED: hypothetical protein [Homo sapiens] 42 6e-04
gi|239749451 PREDICTED: hypothetical protein [Homo sapiens] 42 6e-04
gi|169192119 PREDICTED: hypothetical protein [Homo sapiens] 42 6e-04
gi|239743581 PREDICTED: hypothetical protein [Homo sapiens] 42 6e-04
gi|122692281 hypothetical protein LOC645369 [Homo sapiens] 42 6e-04
>gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 689 bits (1779), Expect = 0.0
Identities = 344/344 (100%), Positives = 344/344 (100%)
Query: 1 MQALSPGTGPVGAPSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVR 60
MQALSPGTGPVGAPSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVR
Sbjct: 1 MQALSPGTGPVGAPSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVR 60
Query: 61 VPAARALALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPRRVDQV 120
VPAARALALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPRRVDQV
Sbjct: 61 VPAARALALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPRRVDQV 120
Query: 121 HLQHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQPQE 180
HLQHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQPQE
Sbjct: 121 HLQHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQPQE 180
Query: 181 RGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGG 240
RGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGG
Sbjct: 181 RGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGG 240
Query: 241 RTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATA 300
RTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATA
Sbjct: 241 RTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATA 300
Query: 301 PAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSVQKATSDHQP 344
PAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSVQKATSDHQP
Sbjct: 301 PAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSVQKATSDHQP 344
>gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 689 bits (1779), Expect = 0.0
Identities = 344/344 (100%), Positives = 344/344 (100%)
Query: 1 MQALSPGTGPVGAPSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVR 60
MQALSPGTGPVGAPSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVR
Sbjct: 1 MQALSPGTGPVGAPSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVR 60
Query: 61 VPAARALALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPRRVDQV 120
VPAARALALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPRRVDQV
Sbjct: 61 VPAARALALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPRRVDQV 120
Query: 121 HLQHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQPQE 180
HLQHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQPQE
Sbjct: 121 HLQHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQPQE 180
Query: 181 RGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGG 240
RGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGG
Sbjct: 181 RGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGG 240
Query: 241 RTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATA 300
RTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATA
Sbjct: 241 RTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATA 300
Query: 301 PAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSVQKATSDHQP 344
PAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSVQKATSDHQP
Sbjct: 301 PAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSVQKATSDHQP 344
>gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo
sapiens]
Length = 344
Score = 689 bits (1779), Expect = 0.0
Identities = 344/344 (100%), Positives = 344/344 (100%)
Query: 1 MQALSPGTGPVGAPSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVR 60
MQALSPGTGPVGAPSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVR
Sbjct: 1 MQALSPGTGPVGAPSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVR 60
Query: 61 VPAARALALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPRRVDQV 120
VPAARALALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPRRVDQV
Sbjct: 61 VPAARALALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPRRVDQV 120
Query: 121 HLQHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQPQE 180
HLQHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQPQE
Sbjct: 121 HLQHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQPQE 180
Query: 181 RGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGG 240
RGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGG
Sbjct: 181 RGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGG 240
Query: 241 RTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATA 300
RTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATA
Sbjct: 241 RTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATA 300
Query: 301 PAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSVQKATSDHQP 344
PAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSVQKATSDHQP
Sbjct: 301 PAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSVQKATSDHQP 344
>gi|239745974 PREDICTED: hypothetical protein XP_002343630 [Homo
sapiens]
Length = 538
Score = 50.8 bits (120), Expect = 2e-06
Identities = 105/356 (29%), Positives = 125/356 (35%), Gaps = 73/356 (20%)
Query: 6 PGTGPVGAPSRCSPSALPLTSPR------RPRAPPPTLAPHLRPRHLRKEVERGGPLGPV 59
PG G + P PL SP RP PPP P L PR LR+ RG +G +
Sbjct: 205 PGPRRGGGLTSAPPGLPPLASPPPFWELPRPPPPPPPPGPALLPRRLREL--RGKEVG-L 261
Query: 60 RVPAARALALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPRRVDQ 119
R ++ L G R G R R G ALL L LGPGS
Sbjct: 262 RPRTRGWTTCVVSPNLRRGSRRA---GNHRVREIEFGSALLAA--LNTLGPGSFGAG--- 313
Query: 120 VHLQHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQPQ 179
LG Q PR++ + V+ E WG + + P
Sbjct: 314 -----LGAQ-GPRSSTP-----------------------ECPVVNGSE-WGLAAPLSP- 342
Query: 180 ERGGGGRGR--GPPSQAAAFSLRHSRAQPWPSGRSA--------ARRRRRLR-------R 222
ERG GR P + + P P GR A A R +R R
Sbjct: 343 ERGSPGRPAFLRSPGLCGPGPVPGGLSVPTPCGRGAGDFSEADLADRAFPVRGAGPIAGR 402
Query: 223 RRRRGERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPP-RPRP 281
RRRRG AAA G Q A A P RAP P RA PRP
Sbjct: 403 RRRRGWTFAAALRKGAPRE----QPPASPAASPCQAPRAPEKETEAPRLRGRATAVAPRP 458
Query: 282 HPASPAPGDGALRGAEATAPAALGLVQPRPKSDIDSPPPRGRA-APSKELEAPSVQ 336
PA APG L + + GL P + SP R RA AP EA S++
Sbjct: 459 LPA--APGFSGLCVLQPFPARSRGLGVPSQQGPTGSPGCRDRASAPRAGAEAGSME 512
Score = 33.1 bits (74), Expect = 0.37
Identities = 45/148 (30%), Positives = 53/148 (35%), Gaps = 19/148 (12%)
Query: 185 GRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGGRTCV 244
G GR P A R W R+ A R R G AA L G C
Sbjct: 121 GTGRSGPGSA-----RLGLGSGWDPARAVAPRAARALGAALFGRAVHTAA---LSGPHCR 172
Query: 245 WQ-GAAQHRARPAGLARAPRARPRDPAGVSRAP-PRPRPHPASPAPGDGALRGAEATAPA 302
+ GA A G + R R R+PA + R P PR S PG L A+ P
Sbjct: 173 LRCGARAFYAAAGGASSRRRQRGRNPALIVRGPGPRRGGGLTSAPPGLPPL----ASPPP 228
Query: 303 ALGLVQPRPKSDIDSPPPRGRAAPSKEL 330
L +P P PPP G A + L
Sbjct: 229 FWELPRPPP-----PPPPPGPALLPRRL 251
>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
Length = 417
Score = 48.9 bits (115), Expect = 7e-06
Identities = 45/172 (26%), Positives = 68/172 (39%), Gaps = 12/172 (6%)
Query: 172 RRSDVQPQERGGGGRGRGPPSQAAAFSLR------HSRAQPWPSGRSAARRRRRLRRRRR 225
+R +Q Q GG G+ RG S +A R + A P P+ R R +R R++ +
Sbjct: 106 KRLQLQCQPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPVPTSRGH-RTEKRKRQQPQ 164
Query: 226 RGERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPAS 285
R G G Q AQ R A A AP +R G +P+
Sbjct: 165 RRPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSR-----GHRTEKRKPQQPQCR 219
Query: 286 PAPGDGALRGAEATAPAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSVQK 337
PA G G RG+ ++ A Q R + +P P R +++ + Q+
Sbjct: 220 PAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSRGHRTEKRKPQQPQR 271
Score = 36.2 bits (82), Expect = 0.044
Identities = 36/146 (24%), Positives = 55/146 (37%), Gaps = 12/146 (8%)
Query: 172 RRSDVQPQERGGGGRGR------GPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRR 225
+R QPQ R GG G+ P + R A P+ S+ R + +R +
Sbjct: 263 KRKPQQPQRRPAGGTGQRRGSGYSPSADQQGAQDREEEAAAAPAPTSSGHRTEKRKRLQL 322
Query: 226 RGERAAAAAE-FGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPA 284
+ + A + G G + Q AQ R A A P + +G +P+
Sbjct: 323 QCQPAGGTGQRRGSGCSSSANQQGAQDREEEAAAAPVPTS-----SGHRTEKRKPQQPQR 377
Query: 285 SPAPGDGALRGAEATAPAALGLVQPR 310
PA G G RG+ ++ A Q R
Sbjct: 378 RPAAGTGQRRGSGSSPSADQQRAQDR 403
>gi|239750586 PREDICTED: hypothetical protein XP_002347439 [Homo
sapiens]
Length = 300
Score = 48.5 bits (114), Expect = 9e-06
Identities = 55/163 (33%), Positives = 64/163 (39%), Gaps = 36/163 (22%)
Query: 171 GRRSDVQPQERGGGGR--GRGPPSQ---AAAFSLRHSRAQPWPSGRSAARRRRRLRRRRR 225
G R V P E GGG GRGP + AA SL + P P G A RR R RR+
Sbjct: 11 GGRLRVGPCECGGGAAEAGRGPRQRFQPPAAASLPRIGSAP-PGGGRALRRGGRGAARRK 69
Query: 226 RGERAAAAAEFGLGGRTCVWQGAAQHRARPAG--LARAPRARPRDPAGVSRAPPRPRPHP 283
R RA A HR P PR+ P PAG ++ PP P
Sbjct: 70 RKRRAPAP--------------VCHHRGSPGSPKFVSPPRS-PGSPAGAAQVPP-----P 109
Query: 284 ASPAPGDGALRGAEATAPAALGLVQPRPKSDIDSPPPRGRAAP 326
P PG AL G + R ++ PPRGRA P
Sbjct: 110 FPPVPGLHAL--------LVCGQPRSREWTERVQLPPRGRAWP 144
>gi|239744883 PREDICTED: hypothetical protein XP_002344274 [Homo
sapiens]
Length = 300
Score = 48.5 bits (114), Expect = 9e-06
Identities = 55/163 (33%), Positives = 64/163 (39%), Gaps = 36/163 (22%)
Query: 171 GRRSDVQPQERGGGGR--GRGPPSQ---AAAFSLRHSRAQPWPSGRSAARRRRRLRRRRR 225
G R V P E GGG GRGP + AA SL + P P G A RR R RR+
Sbjct: 11 GGRLRVGPCECGGGAAEAGRGPRQRFQPPAAASLPRIGSAP-PGGGRALRRGGRGAARRK 69
Query: 226 RGERAAAAAEFGLGGRTCVWQGAAQHRARPAG--LARAPRARPRDPAGVSRAPPRPRPHP 283
R RA A HR P PR+ P PAG ++ PP P
Sbjct: 70 RKRRAPAP--------------VCHHRGSPGSPKFVSPPRS-PGSPAGAAQVPP-----P 109
Query: 284 ASPAPGDGALRGAEATAPAALGLVQPRPKSDIDSPPPRGRAAP 326
P PG AL G + R ++ PPRGRA P
Sbjct: 110 FPPVPGLHAL--------LVCGQPRSREWTERVQLPPRGRAWP 144
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 47.4 bits (111), Expect = 2e-05
Identities = 83/335 (24%), Positives = 121/335 (36%), Gaps = 65/335 (19%)
Query: 5 SPGTGPVGAPS-RCSPSALPLTSPRRPRAPPPTLAP-HLRPRHLRKEVERGGPLGPVRVP 62
+P P G P R +P + +P AP +P R R L + + + P
Sbjct: 1800 APRAQPKGTPGPRATPRKVAPPCLAQPAAPAKVPSPGQQRSRSLHRPAKTSELATLSQPP 1859
Query: 63 AARALALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPRRVDQVHL 122
+ LA ++ + PR RPP V G++P
Sbjct: 1860 RSATPPARLAKTPSSSSSQTSPASQPLPRKRPP----------VTQAAGALPGP------ 1903
Query: 123 QHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQPQERG 182
G P P+ A T S +R F+ + + G P L R+ +P RG
Sbjct: 1904 ---GASPVPKTPARTLLAKQHKTQRSPVRIPFMQRPARR---GPPPL--ARAVPEPGPRG 1955
Query: 183 GGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARR---RRRLR-------RRRRRGERAAA 232
G GP ++ L A SG ++ R RR+L RRRR E ++A
Sbjct: 1956 RAGTEAGPGARGGRLGLVRV-ASALSSGSESSDRSGFRRQLTFIKESPGLRRRRSELSSA 2014
Query: 233 AAEFGLGGRTCVWQGAAQHRARPA------------GLARAPRARPRDPAGVSRAPPRPR 280
+ QGA+ R RPA L APR P AP R R
Sbjct: 2015 ESAASAP------QGASPRRGRPALPAVFLCSSRCEELRAAPRQGP--------APARQR 2060
Query: 281 PHPASPAPGDGALRGAEATAPAALGLVQP--RPKS 313
P A P+PG+ R + +P+ L + P RP++
Sbjct: 2061 PPAARPSPGERPARRTTSESPSRLPVRAPAARPET 2095
Score = 38.1 bits (87), Expect = 0.012
Identities = 94/369 (25%), Positives = 125/369 (33%), Gaps = 72/369 (19%)
Query: 10 PVGAPSRCSPSALPLTSPRRP------RAPPPTLAPHLR-PRHLRKEVERGGPLGPVRVP 62
P + S+ SP++ PL R P P P +P + P + PVR+P
Sbjct: 1872 PSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTPARTLLAKQHKTQRSPVRIP 1931
Query: 63 AARALALALALALAAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPRRVDQVHL 122
+ A RR L P P GRA GPG+ R+ V
Sbjct: 1932 FMQRPA----------RRGPPPLARAVPEPGPRGRAGTEA------GPGARGGRLGLV-- 1973
Query: 123 QHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQPQERG 182
R A+A + R++ +K P L RRS++ E
Sbjct: 1974 ---------RVASALSSGSESSDRSGFRRQLTFIK-------ESPGLRRRRSELSSAESA 2017
Query: 183 -----GGGRGRGPPSQAAAF--SLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAE 235
G RG P+ A F S R + P A R+R R GER A
Sbjct: 2018 ASAPQGASPRRGRPALPAVFLCSSRCEELRAAPRQGPAPARQRPPAARPSPGERPARRTT 2077
Query: 236 FGLGGRTCVWQGAAQHRA--RPAGLARAPRAR------PRDPAGVSRA------PPRPRP 281
R V AA+ R A L AR P PA A PRP P
Sbjct: 2078 SESPSRLPVRAPAARPETVKRYASLPHISVARRPDGAVPAAPASADAARRSSDGEPRPLP 2137
Query: 282 HPASPAPGDGALRGAE------ATAPA-ALGLVQPRPKSDIDSPPPR---GRAAPSKELE 331
A+P +R + +T PA AL L P+ PPPR ++E+
Sbjct: 2138 RVAAPGTTWRRIRDEDVPHILRSTLPATALPLRGSTPEDAPAGPPPRKTSDAVVQTEEVA 2197
Query: 332 APSVQKATS 340
AP +TS
Sbjct: 2198 APKTNSSTS 2206
Score = 36.2 bits (82), Expect = 0.044
Identities = 79/316 (25%), Positives = 108/316 (34%), Gaps = 84/316 (26%)
Query: 112 SVPRRVDQVHLQHLGLQPAPRAAAARREQPA--DATLISDLREVFILKLLQADVMGEPEL 169
++PR + Q PAP AA PA +LI+D A + EPE
Sbjct: 1532 AIPRAFTRERPQGRKEAPAPSKAAPAAPPPARTQPSLIADETPPCYSLSSSASSLSEPEP 1591
Query: 170 W--------GRRSDVQPQERGGGGRGRGPPSQAAAFSLRHSRAQPWPSGR---SAARRRR 218
GR V GGGR P +AA L+ + P R S RRR+
Sbjct: 1592 SEPPAVHPRGREPAVTKDPGPGGGRDSSPSPRAAEELLQRCISSALPRRRPPVSGLRRRK 1651
Query: 219 ----RLRRR-----RRRGERAAA---AAEFGLGGRTCVWQGAAQ-----HRARPA----- 256
RL R R RGE AA A++ + +GA H+A A
Sbjct: 1652 PRATRLDERPAEGSRERGEEAAGSDRASDLDSVEWRAIQEGANSIVTWLHQAAAATREAS 1711
Query: 257 -----------GLARAPRARP------RDPAGVSRAPPRPRPH----------PASPAPG 289
GL+ +P R G + RP P SPA G
Sbjct: 1712 SESDSILSFVSGLSVGSTLQPPKHRKGRQAEGEMGSARRPEKRGAASVKTSGSPRSPA-G 1770
Query: 290 DGALRGAEATAPAALGLVQPRPKSDIDSPPPRG--------RAAPSK------------- 328
RG + T P +++ R + SP PR RA P K
Sbjct: 1771 PEKPRGTQKTTPGVPAVLRGRTVIYVPSPAPRAQPKGTPGPRATPRKVAPPCLAQPAAPA 1830
Query: 329 ELEAPSVQKATSDHQP 344
++ +P Q++ S H+P
Sbjct: 1831 KVPSPGQQRSRSLHRP 1846
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 46.6 bits (109), Expect = 3e-05
Identities = 90/353 (25%), Positives = 115/353 (32%), Gaps = 57/353 (16%)
Query: 14 PSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEV------ERGGPLGPVRVPAARAL 67
P+ +P L P PR PPP LR V ER G +G +P +
Sbjct: 17 PAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATIPES--- 73
Query: 68 ALALALALAAGRRLLAGLGLGRPRSRPP--GRA-LLVVVLLVVLGPGSVPRRVDQV---- 120
A AG AG P SRPP GR GP S P R
Sbjct: 74 ------APRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPG 127
Query: 121 HLQHLGLQPAPRAAAAR---REQPADATLISDLREVFILKLLQADVMGEPE-LWGRRSDV 176
L GL+ + AR E P + L + R + G P RRS
Sbjct: 128 PLGQKGLRISAEETVARGKATEAPKRSALSAGAR-----RDTSGPTPGTPSPAMARRSRA 182
Query: 177 QPQERG-----GGGRGRGP---PSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGE 228
E G R R P P ++ + + HS +P P+ RRR G
Sbjct: 183 AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAA----------RRRPSAGG 232
Query: 229 RAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPR--ARPRDPAGVSRAPPRPRPHPASP 286
A L A+ G RAP ++P+ + PP+ P
Sbjct: 233 GLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDA 292
Query: 287 APGDGALRGAEATAPAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSVQKAT 339
AP G L + P+ G + RP PPP A P PS AT
Sbjct: 293 APALGPLSSSPLATPSPSG-TKARP-----VPPPDNAATPLPATLPPSPPLAT 339
Score = 37.4 bits (85), Expect = 0.020
Identities = 42/164 (25%), Positives = 56/164 (34%), Gaps = 8/164 (4%)
Query: 184 GGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGGRTC 243
G R P ++A P P R L G + A G+GG T
Sbjct: 11 GAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 244 VWQGAAQHRARPAGLA-RAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATAPA 302
R AG + R P +RP RAPP SP P R + T P
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKN---TSPGPVSSPGRASGTTRPG 127
Query: 303 ALGLVQPRPKSDIDSPPPRGRA--APSKELEAPSVQKATSDHQP 344
LG Q + + RG+A AP + + ++ TS P
Sbjct: 128 PLG--QKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTP 169
Score = 29.3 bits (64), Expect = 5.4
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 6/101 (5%)
Query: 3 ALSPGTGP--VGAPSRCSPSALPLTSPRRPRAPPPTLAP---HLRPRHLRKEVERGGPLG 57
A P P + AP P + P + P P A PP AP P + P+
Sbjct: 689 ATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMS 748
Query: 58 PVRVPAARALALALALALAAGRRLLAGLGLGRPRSRPPGRA 98
P P R L A L A L + P ++PP +A
Sbjct: 749 PSATPPPRVPPLLAAPPLQVPPSPPASLPMS-PLAKPPPQA 788
Score = 28.9 bits (63), Expect = 7.0
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 255 PAGLARAPRAR--PRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATAPAALGLVQPRPK 312
PA L +P A+ P+ P ++ P + P P + PG + + + L P+
Sbjct: 773 PASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP 832
Query: 313 SDIDSP----PPRGRAAPSKELEAP 333
+ +P PP A+P+ L+AP
Sbjct: 833 PVLAAPLLQVPPSPPASPT--LQAP 855
Score = 28.5 bits (62), Expect = 9.2
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 2 QALSPGTGPVGAPSRCSPSALPL-TSPRRPRAPPPTLAPHLRPRHLRKEVERGGP-LGPV 59
++LS P+ +P+R PSA +P P P P LRP + + P LGP+
Sbjct: 240 RSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPL 299
>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
Length = 394
Score = 46.2 bits (108), Expect = 4e-05
Identities = 48/138 (34%), Positives = 61/138 (44%), Gaps = 20/138 (14%)
Query: 179 QERGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGL 238
Q G GR S + F+ R S + P+P GR+ +R +RG A G
Sbjct: 81 QGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRA---------QRPQRGGVDLPATPGGP 131
Query: 239 GGRTC-----VWQGAAQHRARPAGLAR--APRA--RPRDPAGVSRAPPRPRPH-PAS-PA 287
G+ V + A + RARP + R APRA RPR PA +PP RPH PA A
Sbjct: 132 RGQCAGRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPAGRAA 191
Query: 288 PGDGALRGAEATAPAALG 305
PG A+ AP G
Sbjct: 192 PGRRPGCTAQLRAPGRRG 209
>gi|157676331 hyaluronan binding protein 4 [Homo sapiens]
Length = 413
Score = 45.8 bits (107), Expect = 6e-05
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 199 LRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGGRTCVWQGAAQHRARPAGL 258
L + P+ R A RRR++ +R+RR E AAAA GGR+ GA+ HRA G
Sbjct: 31 LLDDESDPFDILREAERRRQQQLQRKRRDEAAAAAGAGPRGGRSPA--GASGHRAGAGGR 88
Query: 259 ARAPRARPRDPAGVSRAPPRP 279
+ + R PA V++ P P
Sbjct: 89 RESQKERKSLPAPVAQRPDSP 109
>gi|169164783 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 45.1 bits (105), Expect = 9e-05
Identities = 95/342 (27%), Positives = 114/342 (33%), Gaps = 43/342 (12%)
Query: 4 LSPGTGPVGAPSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVRVPA 63
L +GP A SR P P PR PP +P LRP G G V
Sbjct: 26 LPRSSGPAWAESRARP---PRPRGLEPRHPPG--SPALRPTDRTCSSSSAGVGGGVGGAQ 80
Query: 64 ARALALALALALAAGRRLLAGLGLGR-PRSRPPGRALLVVVLLVVLGPGSVPRRVDQVHL 122
++ L LAL GR LG GR R PP LLV + + R+D +
Sbjct: 81 PGSVPLGQHLALERGRT----LGHGRVGRRDPPPLGLLVNPRVAGVDGLDRGGRLDPAGI 136
Query: 123 -QHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQP--Q 179
Q LGL A RR A L LL +G G R V P Q
Sbjct: 137 GQVLGLGVLGGAGRQRRALGGQA-----------LGLLAQVGIGAGHARGGRGAVGPAGQ 185
Query: 180 ERGGGG----RG-RGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAA 234
R G RG G P++ + + R RRR+R +R R R
Sbjct: 186 HRARLGAAVLRGTAGAPARRVGVVAERAASAACSLQRQRLHARRRVREQRGRVAREVRGR 245
Query: 235 EFGLGGRTCVWQGAAQHRARPAGLARA-PRARPRDPAGVSRAPPRPRPHPASPAPGDGAL 293
G G G A G AR R + P GV A R RP
Sbjct: 246 VIGRGREVQPVVGRRHKPALRRGRARVLGLLRRQQPVGVRHAAVRTRP------------ 293
Query: 294 RGAEATAPAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSV 335
GA A A GL + + G A P +L A V
Sbjct: 294 -GARARARVEAGLGVVAHELVLQERAGHGVAGPGHDLRARRV 334
>gi|169163482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 396
Score = 45.1 bits (105), Expect = 9e-05
Identities = 95/342 (27%), Positives = 114/342 (33%), Gaps = 43/342 (12%)
Query: 4 LSPGTGPVGAPSRCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVRVPA 63
L +GP A SR P P PR PP +P LRP G G V
Sbjct: 26 LPRSSGPAWAESRARP---PRPRGLEPRHPPG--SPALRPTDRTCSSSSAGVGGGVGGAQ 80
Query: 64 ARALALALALALAAGRRLLAGLGLGR-PRSRPPGRALLVVVLLVVLGPGSVPRRVDQVHL 122
++ L LAL GR LG GR R PP LLV + + R+D +
Sbjct: 81 PGSVPLGQHLALERGRT----LGHGRVGRRDPPPLGLLVNPRVAGVDGLDRGGRLDPAGI 136
Query: 123 -QHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQP--Q 179
Q LGL A RR A L LL +G G R V P Q
Sbjct: 137 GQVLGLGVLGGAGRQRRALGGQA-----------LGLLAQVGIGAGHARGGRGAVGPAGQ 185
Query: 180 ERGGGG----RG-RGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAA 234
R G RG G P++ + + R RRR+R +R R R
Sbjct: 186 HRARLGAAVLRGTAGAPARRVGVVAERAASAACSLQRQRLHARRRVREQRGRVAREVRGR 245
Query: 235 EFGLGGRTCVWQGAAQHRARPAGLARA-PRARPRDPAGVSRAPPRPRPHPASPAPGDGAL 293
G G G A G AR R + P GV A R RP
Sbjct: 246 VIGRGREVQPVVGRRHKPALRRGRARVLGLLRRQQPVGVRHAAVRTRP------------ 293
Query: 294 RGAEATAPAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSV 335
GA A A GL + + G A P +L A V
Sbjct: 294 -GARARARVEAGLGVVAHELVLQERAGHGVAGPGHDLRARRV 334
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 44.7 bits (104), Expect = 1e-04
Identities = 63/235 (26%), Positives = 81/235 (34%), Gaps = 73/235 (31%)
Query: 170 WGRRSDVQPQERGGGGRGRG-----------PPSQ------------AAAFSLRHSRAQP 206
WG PQ GG G+ G PP + AAA +R +
Sbjct: 308 WG-----SPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKE 362
Query: 207 WPSGRSAARR------------RRRLRRRRRRGERAAAAAEFGLGGRTCVWQGAAQHRAR 254
PS RSA RRR RRRRRR R++A+A G R A
Sbjct: 363 SPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRR-------PRPAP 415
Query: 255 PAGLARA-PRARPRDPAGVSRA------------------------PPRPRPHPASPAPG 289
P G +R+ RAR +G R PPR RP SP+PG
Sbjct: 416 PRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPG 475
Query: 290 DGALRGAEATAPAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSVQKATSDHQP 344
RG ++ P P+S S P + S E S ++ S +P
Sbjct: 476 AHGRRGGPEGKSSSRS-PGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKP 529
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 44.3 bits (103), Expect = 2e-04
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 208 PSGRSAARRRRRLRR----RRRRGERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPR 263
PS SA R LRR R+ + R A A+ GG QG R R GL+ AP
Sbjct: 97 PSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQGLGPPRGR--GLSTAP- 153
Query: 264 ARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEA 298
P+ + PP PRP P +PA G G G E+
Sbjct: 154 ----PPSSLRLLPPTPRPFPPAPAGGKGEGGGKES 184
Score = 34.3 bits (77), Expect = 0.17
Identities = 36/113 (31%), Positives = 45/113 (39%), Gaps = 11/113 (9%)
Query: 193 QAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGE-------RAAAAAEFGLGGRTCVW 245
+AAA L + P P G AAR R R RR E A AE G G R+
Sbjct: 266 EAAARGLWRRKPAPCPRGACAARLGGRGTGRARRAEFRVAGPRGVAEEAESGRGWRSWPS 325
Query: 246 QGAAQ---HRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRG 295
A PAG +R +A P +P V+R R ++ G G RG
Sbjct: 326 FSAVSGGGESPDPAGCSRG-KAAPEEPPRVARRAHENRLRTSARGLGPGDRRG 377
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 44.3 bits (103), Expect = 2e-04
Identities = 35/95 (36%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 208 PSGRSAARRRRRLRR----RRRRGERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPR 263
PS SA R LRR R+ + R A A+ GG QG R R GL+ AP
Sbjct: 97 PSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWLQGLGPPRGR--GLSTAP- 153
Query: 264 ARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEA 298
P+ + PP PRP P +PA G G G E+
Sbjct: 154 ----PPSSLRLLPPTPRPFPPAPAGGKGEGGGKES 184
Score = 34.3 bits (77), Expect = 0.17
Identities = 36/113 (31%), Positives = 45/113 (39%), Gaps = 11/113 (9%)
Query: 193 QAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGE-------RAAAAAEFGLGGRTCVW 245
+AAA L + P P G AAR R R RR E A AE G G R+
Sbjct: 266 EAAARGLWRRKPAPCPRGACAARLGGRGTGRARRAEFRVAGPRGVAEEAESGRGWRSWPS 325
Query: 246 QGAAQ---HRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRG 295
A PAG +R +A P +P V+R R ++ G G RG
Sbjct: 326 FSAVSGGGESPDPAGCSRG-KAAPEEPPRVARRAHENRLRTSARGLGPGDRRG 377
>gi|239753916 PREDICTED: hypothetical protein XP_002345830 [Homo
sapiens]
Length = 233
Score = 43.5 bits (101), Expect = 3e-04
Identities = 40/128 (31%), Positives = 52/128 (40%), Gaps = 18/128 (14%)
Query: 187 GRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGGRTCVWQ 246
G P++ A F R R W R+ R + A E GLG W+
Sbjct: 34 GNSTPARRARFPRRSGRVGGW---RAQVAPHRPAEPLGLLADAAPVQREAGLGR----WR 86
Query: 247 GAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATAPAALGL 306
+ RAR G +PRA SRAPP RP ASP A+ T+PA L
Sbjct: 87 W--RRRARAVGTC-SPRA--------SRAPPPGRPASASPPAASRLPAAAKTTSPAVLSA 135
Query: 307 VQPRPKSD 314
V P+ K++
Sbjct: 136 VGPKAKTN 143
>gi|239748460 PREDICTED: hypothetical protein [Homo sapiens]
Length = 272
Score = 43.5 bits (101), Expect = 3e-04
Identities = 40/128 (31%), Positives = 52/128 (40%), Gaps = 18/128 (14%)
Query: 187 GRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGGRTCVWQ 246
G P++ A F R R W R+ R + A E GLG W+
Sbjct: 34 GNSTPARRARFPRRSGRVGGW---RAQVAPHRPAEPLGLLADAAPVQREAGLGR----WR 86
Query: 247 GAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATAPAALGL 306
+ RAR G +PRA SRAPP RP ASP A+ T+PA L
Sbjct: 87 W--RRRARAVGTC-SPRA--------SRAPPPGRPASASPPAASRLPAAAKTTSPAVLSA 135
Query: 307 VQPRPKSD 314
V P+ K++
Sbjct: 136 VGPKAKTN 143
>gi|239742421 PREDICTED: hypothetical protein XP_002342511 [Homo
sapiens]
Length = 272
Score = 43.5 bits (101), Expect = 3e-04
Identities = 40/128 (31%), Positives = 52/128 (40%), Gaps = 18/128 (14%)
Query: 187 GRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGGRTCVWQ 246
G P++ A F R R W R+ R + A E GLG W+
Sbjct: 34 GNSTPARRARFPRRSGRVGGW---RAQVAPHRPAEPLGLLADAAPVQREAGLGR----WR 86
Query: 247 GAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATAPAALGL 306
+ RAR G +PRA SRAPP RP ASP A+ T+PA L
Sbjct: 87 W--RRRARAVGTC-SPRA--------SRAPPPGRPASASPPAASRLPAAAKTTSPAVLSA 135
Query: 307 VQPRPKSD 314
V P+ K++
Sbjct: 136 VGPKAKTN 143
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 43.5 bits (101), Expect = 3e-04
Identities = 83/343 (24%), Positives = 131/343 (38%), Gaps = 59/343 (17%)
Query: 16 RCSPSALPLTSPRRPRAPPPTLAPHLRPRHLRKEVERGGPLGPVRVPAARALALALALAL 75
R PS SPRR R PP + P PRH R PVR + +L+ + +
Sbjct: 312 RRRPSPRRRPSPRR-RTPPRRMPPP--PRHRRSR-------SPVRRRRRSSASLSGSSSS 361
Query: 76 AAGRRLLAGLGLGRPRSRPPGRALLVVVLLVVLGPGSVPRRVDQVHLQHLGLQPAPRAAA 135
++ R + P +PP R L P + P R + H P P+
Sbjct: 362 SSSSRSRS------PPKKPPKRTSSPPRKTRRLSPSASPPR--RRHRPSPPATPPPKTRH 413
Query: 136 ARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQPQERGGGGRGRGPPSQAA 195
+ Q ++ T ++ V P GR S + +G R P+
Sbjct: 414 SPTPQQSNRTR-------------KSRVSVSP---GRTSGKVTKHKGTEKRESPSPAPKP 457
Query: 196 AFSLRHSRAQPWPSGRSAA----RRRRRLRRRRRRGER---AAAAAEFGLGGRTCVWQGA 248
+ S ++ G+ AA ++RR+ RR+ ++ +++++E R+ V G
Sbjct: 458 R-KVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGE 516
Query: 249 AQHRARPA---GLARAPRARPRD--PAGVSRAPPRPRP--HPASPAPGDGALRGAEATAP 301
R R + + +PR R ++ P G R P P P SP+P R T P
Sbjct: 517 VGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPP 576
Query: 302 AALGLVQPRPKSDIDSPPPRGRAAPSKELEAPSVQKATSDHQP 344
P+ SPPPR R +PS +P +Q+ S P
Sbjct: 577 ---------PRRRTPSPPPR-RRSPSPRRYSPPIQRRYSPSPP 609
Score = 38.1 bits (87), Expect = 0.012
Identities = 40/153 (26%), Positives = 57/153 (37%), Gaps = 15/153 (9%)
Query: 184 GGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGGRTC 243
G R R PS++A+ S R + + P GR RRRR A R
Sbjct: 518 GRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRR-----RRT 572
Query: 244 VWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAEATAPAA 303
+ P R+P R P R P P P + +P R A + P
Sbjct: 573 PTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP-- 630
Query: 304 LGLVQPRPKSDID-SPPPRGRAAPSKELEAPSV 335
PK + SPPP+ R++P + +PS+
Sbjct: 631 -------PKRRVSHSPPPKQRSSPVTKRRSPSL 656
>gi|239751491 PREDICTED: hypothetical protein XP_002347883 [Homo
sapiens]
Length = 333
Score = 42.7 bits (99), Expect = 5e-04
Identities = 39/110 (35%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 165 GEPELWGRRSDVQPQERGGGGRGRGPPSQAAAFSLRHSR--AQPWPSGRS-AARRRRRLR 221
GE + G+ D++ + G GP AAA LR SR A W R RR RR
Sbjct: 171 GEQKRSGQLGDIKRGKGGERNVPAGPGGSAAANDLRRSRVSAPVWQRARGRGPRRARRSG 230
Query: 222 RRRRRGERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAG 271
R RRG +E G GG V GA R G R P PR G
Sbjct: 231 RGPRRGPEVWPRSEEGPGGLAEVRGGA---RRSGRGPRRGPEVWPRSEEG 277
>gi|239745989 PREDICTED: hypothetical protein XP_002344188 [Homo
sapiens]
Length = 296
Score = 42.7 bits (99), Expect = 5e-04
Identities = 39/110 (35%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 165 GEPELWGRRSDVQPQERGGGGRGRGPPSQAAAFSLRHSR--AQPWPSGRS-AARRRRRLR 221
GE + G+ D++ + G GP AAA LR SR A W R RR RR
Sbjct: 134 GEQKRSGQLGDIKRGKGGERNVPAGPGGSAAANDLRRSRVSAPVWQRARGRGPRRARRSG 193
Query: 222 RRRRRGERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAG 271
R RRG +E G GG V GA R G R P PR G
Sbjct: 194 RGPRRGPEVWPRSEEGPGGLAEVRGGA---RRSGRGPRRGPEVWPRSEEG 240
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 42.4 bits (98), Expect = 6e-04
Identities = 40/116 (34%), Positives = 46/116 (39%), Gaps = 15/116 (12%)
Query: 182 GGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGGR 241
G G G G P + A RA+ + RSA R + +RR G RA A A G
Sbjct: 285 GLAGVGSGAPGEPA----EPGRAR---APRSAPSSREPRQTKRRVGSRARAGAGAVTGPC 337
Query: 242 TCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAE 297
QGA G +PR P D G APP PHP PA AL E
Sbjct: 338 PAAAQGAR-------GSWPSPRCLPSD-GGAREAPPTSAPHPRRPAGSPPALADRE 385
Score = 31.6 bits (70), Expect = 1.1
Identities = 45/155 (29%), Positives = 58/155 (37%), Gaps = 33/155 (21%)
Query: 184 GGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRR------------------ 225
G R S AAA R ++ P+P+ R RRR +R+
Sbjct: 167 GARSGAAASVAAAGGTRLAQQAPFPAAR--CRRRGAIRKPLHDVTAAAFIVLVELLFAIT 224
Query: 226 RGERAAAAA-----EFGLGGRTCVWQGAAQHRARPAG--LARAPRARPRDPAGVSRAPPR 278
GERAA+A F G GA RA+P G A+ P R DP + PR
Sbjct: 225 SGERAASAPRQESHNFAKGCAEFYGSGA---RAQPGGPCWAQGPPGRLPDPIPLPTRAPR 281
Query: 279 PRPHPA---SPAPGDGALRGAEATAPAALGLVQPR 310
A S APG+ A G +A +PR
Sbjct: 282 TSAGLAGVGSGAPGEPAEPGRARAPRSAPSSREPR 316
>gi|169194607 PREDICTED: hypothetical protein [Homo sapiens]
Length = 436
Score = 42.4 bits (98), Expect = 6e-04
Identities = 55/163 (33%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 183 GGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGE-RAAAAAEFGLGGR 241
GGGR G +A +RA+P S RRRRR + RR A G GR
Sbjct: 224 GGGRRVGSRRRATV-----TRARPSRSLAPPPRRRRRAGQTHRRARTEVAGNVHVGHPGR 278
Query: 242 TCVWQGAAQHRARPAGLARAPRARPRDPA--GVSRAPP--------RPRPHP-ASPAPGD 290
+GAA A + A R R D A GVS APP R PHP + PG
Sbjct: 279 ----EGAAGEGAGRDPESSADR-RGCDCAAWGVSLAPPPLQAGEPSRGHPHPRLTDVPGT 333
Query: 291 GALRGAEATAPAALGLVQPRPKSDIDSPPPRGRAAPSKELEAP 333
RG +L L+QP K +P PR A + +AP
Sbjct: 334 QMSRGVRGQGAPSL-LLQP-VKPGTAAPSPRAEAVSAARSDAP 374
Score = 32.0 bits (71), Expect = 0.83
Identities = 30/85 (35%), Positives = 36/85 (42%), Gaps = 16/85 (18%)
Query: 254 RPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAE-ATAPAALGLVQ---- 308
+P A +PRA A PRP+ PGD RGAE TAPA GL +
Sbjct: 353 KPGTAAPSPRAEAVSAARSDA--PRPKGREIRGEPGDLRPRGAEGCTAPAPTGLFREDAS 410
Query: 309 ---PRP------KSDIDSPPPRGRA 324
PR + + SP PR RA
Sbjct: 411 PSCPREVLGSWMRKSLLSPAPRPRA 435
>gi|239754911 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 42.4 bits (98), Expect = 6e-04
Identities = 38/115 (33%), Positives = 46/115 (40%), Gaps = 11/115 (9%)
Query: 183 GGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGGRT 242
G GR P S A A +LR S PWP G S R R RRR + AA++ R
Sbjct: 82 GHAHGRWPRSAATACTLRLS---PWPGGASCHHRPRYHLRRRPQPHGAASSCSLP-RCRL 137
Query: 243 CVWQGAAQHRARPAGL-------ARAPRARPRDPAGVSRAPPRPRPHPASPAPGD 290
C + A R P L R+ R A R P P P +P+P D
Sbjct: 138 CPERSAPPRRRGPPPLPTSCHWARRSCALRRGGAASWRRGPGTPAAAPEAPSPPD 192
>gi|169201944 PREDICTED: hypothetical protein [Homo sapiens]
Length = 436
Score = 42.4 bits (98), Expect = 6e-04
Identities = 55/163 (33%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 183 GGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGE-RAAAAAEFGLGGR 241
GGGR G +A +RA+P S RRRRR + RR A G GR
Sbjct: 224 GGGRRVGSRRRATV-----TRARPSRSLAPPPRRRRRAGQTHRRARTEVAGNVHVGHPGR 278
Query: 242 TCVWQGAAQHRARPAGLARAPRARPRDPA--GVSRAPP--------RPRPHP-ASPAPGD 290
+GAA A + A R R D A GVS APP R PHP + PG
Sbjct: 279 ----EGAAGEGAGRDPESSADR-RGCDCAAWGVSLAPPPLQAGEPSRGHPHPRLTDVPGT 333
Query: 291 GALRGAEATAPAALGLVQPRPKSDIDSPPPRGRAAPSKELEAP 333
RG +L L+QP K +P PR A + +AP
Sbjct: 334 QMSRGVRGQGAPSL-LLQP-VKPGTAAPSPRAEAVSAARSDAP 374
Score = 32.0 bits (71), Expect = 0.83
Identities = 30/85 (35%), Positives = 36/85 (42%), Gaps = 16/85 (18%)
Query: 254 RPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAE-ATAPAALGLVQ---- 308
+P A +PRA A PRP+ PGD RGAE TAPA GL +
Sbjct: 353 KPGTAAPSPRAEAVSAARSDA--PRPKGREIRGEPGDLRPRGAEGCTAPAPTGLFREDAS 410
Query: 309 ---PRP------KSDIDSPPPRGRA 324
PR + + SP PR RA
Sbjct: 411 PSCPREVLGSWMRKSLLSPAPRPRA 435
>gi|239749451 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 42.4 bits (98), Expect = 6e-04
Identities = 38/115 (33%), Positives = 46/115 (40%), Gaps = 11/115 (9%)
Query: 183 GGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGGRT 242
G GR P S A A +LR S PWP G S R R RRR + AA++ R
Sbjct: 82 GHAHGRWPRSAATACTLRLS---PWPGGASCHHRPRYHLRRRPQPHGAASSCSLP-RCRL 137
Query: 243 CVWQGAAQHRARPAGL-------ARAPRARPRDPAGVSRAPPRPRPHPASPAPGD 290
C + A R P L R+ R A R P P P +P+P D
Sbjct: 138 CPERSAPPRRRGPPPLPTSCHWARRSCALRRGGAASWRRGPGTPAAAPEAPSPPD 192
>gi|169192119 PREDICTED: hypothetical protein [Homo sapiens]
Length = 436
Score = 42.4 bits (98), Expect = 6e-04
Identities = 55/163 (33%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 183 GGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGE-RAAAAAEFGLGGR 241
GGGR G +A +RA+P S RRRRR + RR A G GR
Sbjct: 224 GGGRRVGSRRRATV-----TRARPSRSLAPPPRRRRRAGQTHRRARTEVAGNVHVGHPGR 278
Query: 242 TCVWQGAAQHRARPAGLARAPRARPRDPA--GVSRAPP--------RPRPHP-ASPAPGD 290
+GAA A + A R R D A GVS APP R PHP + PG
Sbjct: 279 ----EGAAGEGAGRDPESSADR-RGCDCAAWGVSLAPPPLQAGEPSRGHPHPRLTDVPGT 333
Query: 291 GALRGAEATAPAALGLVQPRPKSDIDSPPPRGRAAPSKELEAP 333
RG +L L+QP K +P PR A + +AP
Sbjct: 334 QMSRGVRGQGAPSL-LLQP-VKPGTAAPSPRAEAVSAARSDAP 374
Score = 32.0 bits (71), Expect = 0.83
Identities = 30/85 (35%), Positives = 36/85 (42%), Gaps = 16/85 (18%)
Query: 254 RPAGLARAPRARPRDPAGVSRAPPRPRPHPASPAPGDGALRGAE-ATAPAALGLVQ---- 308
+P A +PRA A PRP+ PGD RGAE TAPA GL +
Sbjct: 353 KPGTAAPSPRAEAVSAARSDA--PRPKGREIRGEPGDLRPRGAEGCTAPAPTGLFREDAS 410
Query: 309 ---PRP------KSDIDSPPPRGRA 324
PR + + SP PR RA
Sbjct: 411 PSCPREVLGSWMRKSLLSPAPRPRA 435
>gi|239743581 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 42.4 bits (98), Expect = 6e-04
Identities = 38/115 (33%), Positives = 46/115 (40%), Gaps = 11/115 (9%)
Query: 183 GGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFGLGGRT 242
G GR P S A A +LR S PWP G S R R RRR + AA++ R
Sbjct: 82 GHAHGRWPRSAATACTLRLS---PWPGGASCHHRPRYHLRRRPQPHGAASSCSLP-RCRL 137
Query: 243 CVWQGAAQHRARPAGL-------ARAPRARPRDPAGVSRAPPRPRPHPASPAPGD 290
C + A R P L R+ R A R P P P +P+P D
Sbjct: 138 CPERSAPPRRRGPPPLPTSCHWARRSCALRRGGAASWRRGPGTPAAAPEAPSPPD 192
>gi|122692281 hypothetical protein LOC645369 [Homo sapiens]
Length = 621
Score = 42.4 bits (98), Expect = 6e-04
Identities = 91/358 (25%), Positives = 126/358 (35%), Gaps = 78/358 (21%)
Query: 11 VGAPSRCSPSALPLTSPRRPRAPPPTLAP------HLRPRHLRKEVERGGPLGPVRVPAA 64
+ A + + +A +S P A PP P +++ R L E++ GG G +
Sbjct: 218 LAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGL--ELKPGGCGG-----SG 270
Query: 65 RALALALALALAAGRRLLAGLGLGRPR--SRPPGRALLVVVLLVVLGPGSVPRRVDQVHL 122
A A LA + A GRPR + PP L P S+ V V+
Sbjct: 271 DAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPD---LASSPRCPREPPSLAEAVYSVYR 327
Query: 123 QHLGLQPAPRAAAARREQPADATLISDLREVFILKLLQADVMGEPELWGRRSDVQPQERG 182
+ G+ + RAAAA A + PE WGR+S
Sbjct: 328 ERSGVAGSRRAAAATAAAAASSCS-------------SPAPCSPPESWGRQSTASSFVDS 374
Query: 183 G----------GGRGRGPPSQAAAFSLRHSR----AQPWPSG---------RSAARRRRR 219
GGR RG ++ A+ S + +Q P G R A R
Sbjct: 375 SLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRG 434
Query: 220 LRRRRRRGERAAAA-AEFGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVS--RAP 276
RR E A AA A G GGR R A L R R +G+ RAP
Sbjct: 435 ARREPEEPEGAVAARAARGQGGRL-------PRTGRYAALRR------RSTSGLPDYRAP 481
Query: 277 PRPRPHPASPAPGDGALRGAEATAPAALGLVQPRPKSDIDSPPPRGRAAPSKELEAPS 334
P P P P+PG A+ + P P ++ PP R + S + + PS
Sbjct: 482 PSPEP---PPSPG-----SADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPS 531
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,590,754
Number of Sequences: 37866
Number of extensions: 1271860
Number of successful extensions: 15133
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 1152
Number of HSP's that attempted gapping in prelim test: 10995
Number of HSP's gapped (non-prelim): 4572
length of query: 344
length of database: 18,247,518
effective HSP length: 103
effective length of query: 241
effective length of database: 14,347,320
effective search space: 3457704120
effective search space used: 3457704120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.