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Search of human proteins with 239755499
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755499 PREDICTED: hypothetical protein [Homo sapiens]
(516 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755499 PREDICTED: hypothetical protein [Homo sapiens] 1057 0.0
gi|239750031 PREDICTED: hypothetical protein [Homo sapiens] 685 0.0
gi|239744342 PREDICTED: hypothetical protein XP_002343123 [Homo ... 685 0.0
gi|47078281 hypothetical protein LOC9679 [Homo sapiens] 35 0.13
gi|155030218 PDS5, regulator of cohesion maintenance, homolog A ... 35 0.16
gi|155030216 PDS5, regulator of cohesion maintenance, homolog A ... 35 0.16
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens] 34 0.28
gi|166795280 forkhead box N4 [Homo sapiens] 33 0.48
gi|153251865 hypothetical protein LOC84226 [Homo sapiens] 33 0.48
gi|239756135 PREDICTED: similar to AGAP002076-PA [Homo sapiens] 33 0.62
gi|239750666 PREDICTED: hypothetical protein XP_002347503 [Homo ... 33 0.62
gi|239744976 PREDICTED: hypothetical protein XP_002343322 [Homo ... 33 0.62
gi|38569493 potassium voltage-gated channel, subfamily H (eag-re... 33 0.62
gi|60097902 filaggrin [Homo sapiens] 33 0.82
gi|156938343 talin 2 [Homo sapiens] 33 0.82
gi|116517332 STG protein [Homo sapiens] 33 0.82
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 32 1.4
gi|239755536 PREDICTED: hypothetical protein [Homo sapiens] 32 1.8
gi|239749998 PREDICTED: hypothetical protein XP_002347249 [Homo ... 32 1.8
gi|239744309 PREDICTED: hypothetical protein XP_002343114 [Homo ... 32 1.8
gi|116812620 hypothetical protein LOC147965 [Homo sapiens] 31 2.4
gi|239752661 PREDICTED: hypothetical protein [Homo sapiens] 31 3.1
gi|239741005 PREDICTED: hypothetical protein XP_002342062 [Homo ... 31 3.1
gi|226437571 abhydrolase domain containing 14A [Homo sapiens] 31 3.1
gi|197276594 RNA binding motif protein 20 [Homo sapiens] 31 3.1
gi|115387099 brain-specific angiogenesis inhibitor 2 [Homo sapiens] 31 3.1
gi|21361937 proline rich 7 (synaptic) [Homo sapiens] 31 3.1
gi|126352608 elastin isoform e precursor [Homo sapiens] 30 5.3
gi|126352322 elastin isoform c precursor [Homo sapiens] 30 5.3
gi|126352700 elastin isoform b precursor [Homo sapiens] 30 5.3
>gi|239755499 PREDICTED: hypothetical protein [Homo sapiens]
Length = 516
Score = 1057 bits (2733), Expect = 0.0
Identities = 516/516 (100%), Positives = 516/516 (100%)
Query: 1 MESRNPWDQAAVELRLLHALVEPHNVRPQFPLQPFAAVNALAQTVQLELAQLGPAGVESA 60
MESRNPWDQAAVELRLLHALVEPHNVRPQFPLQPFAAVNALAQTVQLELAQLGPAGVESA
Sbjct: 1 MESRNPWDQAAVELRLLHALVEPHNVRPQFPLQPFAAVNALAQTVQLELAQLGPAGVESA 60
Query: 61 NPGHRIKSDLVPHLLGQILGSLDGIQSLEERLGQRQALGGFHGLIWKKEALLSQAPAPGP 120
NPGHRIKSDLVPHLLGQILGSLDGIQSLEERLGQRQALGGFHGLIWKKEALLSQAPAPGP
Sbjct: 61 NPGHRIKSDLVPHLLGQILGSLDGIQSLEERLGQRQALGGFHGLIWKKEALLSQAPAPGP 120
Query: 121 HHLIPDLPPSPLPHLTTLHGTAQAAQQAIGHGHVVLAHGPVLQAPAFAIVVDKLCRLAGE 180
HHLIPDLPPSPLPHLTTLHGTAQAAQQAIGHGHVVLAHGPVLQAPAFAIVVDKLCRLAGE
Sbjct: 121 HHLIPDLPPSPLPHLTTLHGTAQAAQQAIGHGHVVLAHGPVLQAPAFAIVVDKLCRLAGE 180
Query: 181 EQGFLAHLDLGIEAAQAAAHAALEHGVIIVVGVAQGLLEALQGLLEDAEAQEGIAHAQAD 240
EQGFLAHLDLGIEAAQAAAHAALEHGVIIVVGVAQGLLEALQGLLEDAEAQEGIAHAQAD
Sbjct: 181 EQGFLAHLDLGIEAAQAAAHAALEHGVIIVVGVAQGLLEALQGLLEDAEAQEGIAHAQAD 240
Query: 241 LASELGTCPGTRQPKAGLAVGDGLVKLAQLLVAACQVQVALQEEVGILQLPGRVDLDHSE 300
LASELGTCPGTRQPKAGLAVGDGLVKLAQLLVAACQVQVALQEEVGILQLPGRVDLDHSE
Sbjct: 241 LASELGTCPGTRQPKAGLAVGDGLVKLAQLLVAACQVQVALQEEVGILQLPGRVDLDHSE 300
Query: 301 LHTATHLLVAAHLRVGCDQAAQHAEAPHEVRALLQHLCPHLQCLLCLVGLVQLEPLLDLL 360
LHTATHLLVAAHLRVGCDQAAQHAEAPHEVRALLQHLCPHLQCLLCLVGLVQLEPLLDLL
Sbjct: 301 LHTATHLLVAAHLRVGCDQAAQHAEAPHEVRALLQHLCPHLQCLLCLVGLVQLEPLLDLL 360
Query: 361 LGLVLPHPPQALCPTWGDPWWLRASRHSWGRNHSASCPPKRGNKSSVGWEPEWGLDGEQA 420
LGLVLPHPPQALCPTWGDPWWLRASRHSWGRNHSASCPPKRGNKSSVGWEPEWGLDGEQA
Sbjct: 361 LGLVLPHPPQALCPTWGDPWWLRASRHSWGRNHSASCPPKRGNKSSVGWEPEWGLDGEQA 420
Query: 421 PPWEQSWFSPSAAVAASWGHMASEECQQQGHHGPSQQPCQGASSSKWAGLGLEVLGGRRA 480
PPWEQSWFSPSAAVAASWGHMASEECQQQGHHGPSQQPCQGASSSKWAGLGLEVLGGRRA
Sbjct: 421 PPWEQSWFSPSAAVAASWGHMASEECQQQGHHGPSQQPCQGASSSKWAGLGLEVLGGRRA 480
Query: 481 RLDLQVRGSQVSAQPCFFPIKTPLTAASPGSVPEIH 516
RLDLQVRGSQVSAQPCFFPIKTPLTAASPGSVPEIH
Sbjct: 481 RLDLQVRGSQVSAQPCFFPIKTPLTAASPGSVPEIH 516
>gi|239750031 PREDICTED: hypothetical protein [Homo sapiens]
Length = 356
Score = 685 bits (1767), Expect = 0.0
Identities = 330/331 (99%), Positives = 331/331 (100%)
Query: 186 AHLDLGIEAAQAAAHAALEHGVIIVVGVAQGLLEALQGLLEDAEAQEGIAHAQADLASEL 245
AHLDLGIEAAQAAAHAALEHGVIIVVG+AQGLLEALQGLLEDAEAQEGIAHAQADLASEL
Sbjct: 26 AHLDLGIEAAQAAAHAALEHGVIIVVGIAQGLLEALQGLLEDAEAQEGIAHAQADLASEL 85
Query: 246 GTCPGTRQPKAGLAVGDGLVKLAQLLVAACQVQVALQEEVGILQLPGRVDLDHSELHTAT 305
GTCPGTRQPKAGLAVGDGLVKLAQLLVAACQVQVALQEEVGILQLPGRVDLDHSELHTAT
Sbjct: 86 GTCPGTRQPKAGLAVGDGLVKLAQLLVAACQVQVALQEEVGILQLPGRVDLDHSELHTAT 145
Query: 306 HLLVAAHLRVGCDQAAQHAEAPHEVRALLQHLCPHLQCLLCLVGLVQLEPLLDLLLGLVL 365
HLLVAAHLRVGCDQAAQHAEAPHEVRALLQHLCPHLQCLLCLVGLVQLEPLLDLLLGLVL
Sbjct: 146 HLLVAAHLRVGCDQAAQHAEAPHEVRALLQHLCPHLQCLLCLVGLVQLEPLLDLLLGLVL 205
Query: 366 PHPPQALCPTWGDPWWLRASRHSWGRNHSASCPPKRGNKSSVGWEPEWGLDGEQAPPWEQ 425
PHPPQALCPTWGDPWWLRASRHSWGRNHSASCPPKRGNKSSVGWEPEWGLDGEQAPPWEQ
Sbjct: 206 PHPPQALCPTWGDPWWLRASRHSWGRNHSASCPPKRGNKSSVGWEPEWGLDGEQAPPWEQ 265
Query: 426 SWFSPSAAVAASWGHMASEECQQQGHHGPSQQPCQGASSSKWAGLGLEVLGGRRARLDLQ 485
SWFSPSAAVAASWGHMASEECQQQGHHGPSQQPCQGASSSKWAGLGLEVLGGRRARLDLQ
Sbjct: 266 SWFSPSAAVAASWGHMASEECQQQGHHGPSQQPCQGASSSKWAGLGLEVLGGRRARLDLQ 325
Query: 486 VRGSQVSAQPCFFPIKTPLTAASPGSVPEIH 516
VRGSQVSAQPCFFPIKTPLTAASPGSVPEIH
Sbjct: 326 VRGSQVSAQPCFFPIKTPLTAASPGSVPEIH 356
>gi|239744342 PREDICTED: hypothetical protein XP_002343123 [Homo
sapiens]
Length = 356
Score = 685 bits (1767), Expect = 0.0
Identities = 330/331 (99%), Positives = 331/331 (100%)
Query: 186 AHLDLGIEAAQAAAHAALEHGVIIVVGVAQGLLEALQGLLEDAEAQEGIAHAQADLASEL 245
AHLDLGIEAAQAAAHAALEHGVIIVVG+AQGLLEALQGLLEDAEAQEGIAHAQADLASEL
Sbjct: 26 AHLDLGIEAAQAAAHAALEHGVIIVVGIAQGLLEALQGLLEDAEAQEGIAHAQADLASEL 85
Query: 246 GTCPGTRQPKAGLAVGDGLVKLAQLLVAACQVQVALQEEVGILQLPGRVDLDHSELHTAT 305
GTCPGTRQPKAGLAVGDGLVKLAQLLVAACQVQVALQEEVGILQLPGRVDLDHSELHTAT
Sbjct: 86 GTCPGTRQPKAGLAVGDGLVKLAQLLVAACQVQVALQEEVGILQLPGRVDLDHSELHTAT 145
Query: 306 HLLVAAHLRVGCDQAAQHAEAPHEVRALLQHLCPHLQCLLCLVGLVQLEPLLDLLLGLVL 365
HLLVAAHLRVGCDQAAQHAEAPHEVRALLQHLCPHLQCLLCLVGLVQLEPLLDLLLGLVL
Sbjct: 146 HLLVAAHLRVGCDQAAQHAEAPHEVRALLQHLCPHLQCLLCLVGLVQLEPLLDLLLGLVL 205
Query: 366 PHPPQALCPTWGDPWWLRASRHSWGRNHSASCPPKRGNKSSVGWEPEWGLDGEQAPPWEQ 425
PHPPQALCPTWGDPWWLRASRHSWGRNHSASCPPKRGNKSSVGWEPEWGLDGEQAPPWEQ
Sbjct: 206 PHPPQALCPTWGDPWWLRASRHSWGRNHSASCPPKRGNKSSVGWEPEWGLDGEQAPPWEQ 265
Query: 426 SWFSPSAAVAASWGHMASEECQQQGHHGPSQQPCQGASSSKWAGLGLEVLGGRRARLDLQ 485
SWFSPSAAVAASWGHMASEECQQQGHHGPSQQPCQGASSSKWAGLGLEVLGGRRARLDLQ
Sbjct: 266 SWFSPSAAVAASWGHMASEECQQQGHHGPSQQPCQGASSSKWAGLGLEVLGGRRARLDLQ 325
Query: 486 VRGSQVSAQPCFFPIKTPLTAASPGSVPEIH 516
VRGSQVSAQPCFFPIKTPLTAASPGSVPEIH
Sbjct: 326 VRGSQVSAQPCFFPIKTPLTAASPGSVPEIH 356
>gi|47078281 hypothetical protein LOC9679 [Homo sapiens]
Length = 422
Score = 35.4 bits (80), Expect = 0.13
Identities = 30/87 (34%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 437 SWGHMASEECQQQG-HHGPSQQPCQGASSSKWAGLG-------LEVLGGRRARLDLQVRG 488
S ++ S C Q G HH QPCQG S G L +GG RLDLQ
Sbjct: 172 SRANVLSSPCDQAGLHHRFGGQPCQGVPGSAPCGQAGDTWSPDLHPVGG--GRLDLQRSL 229
Query: 489 SQVSAQPCFFPIKTPLTAASPGSVPEI 515
S Q F P ++P S PE+
Sbjct: 230 SCSHEQFSFVEYCPPSANSTPASTPEL 256
>gi|155030218 PDS5, regulator of cohesion maintenance, homolog A
isoform 2 [Homo sapiens]
Length = 1297
Score = 35.0 bits (79), Expect = 0.16
Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 24/237 (10%)
Query: 40 ALAQTVQLELAQLGPAGVES-ANPGHRIKSDLVPHLLGQILGSLDGIQSLEERLGQ---- 94
+L Q +++E ++ A ++ N GH+I++DL QI +L I + + G
Sbjct: 642 SLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLP-----QIRSTLIPILHQKAKRGTPHQA 696
Query: 95 RQALGGFHGLIWKKEALLSQAPAPGPHHLIPDLPPSPLPHLTTLHGTAQAAQQAIGHGHV 154
+QA+ H + KE L+Q P L D+P + L +L + A
Sbjct: 697 KQAVHCIHAIFTNKEVQLAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFA---- 752
Query: 155 VLAHGPVLQAPAFAIVVDKLC--RLAGEEQGFLAHLDLGIEAAQAAAHAALEHGVIIVVG 212
P+ A IV D L R GE+ G L D + A A++ V ++G
Sbjct: 753 ----SPMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLG 808
Query: 213 VAQGLLEALQGLLEDAEAQEGIAHAQADLASELGTCPGTRQPKAGLAVGDGLVKLAQ 269
+ ++ L A + ++ DL +E + + LA G ++KLAQ
Sbjct: 809 MKNNQSKSANSTLRLLSA---MLVSEGDL-TEQKRISKSDMSRLRLAAGSAIMKLAQ 861
>gi|155030216 PDS5, regulator of cohesion maintenance, homolog A
isoform 1 [Homo sapiens]
Length = 1337
Score = 35.0 bits (79), Expect = 0.16
Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 24/237 (10%)
Query: 40 ALAQTVQLELAQLGPAGVES-ANPGHRIKSDLVPHLLGQILGSLDGIQSLEERLGQ---- 94
+L Q +++E ++ A ++ N GH+I++DL QI +L I + + G
Sbjct: 682 SLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLP-----QIRSTLIPILHQKAKRGTPHQA 736
Query: 95 RQALGGFHGLIWKKEALLSQAPAPGPHHLIPDLPPSPLPHLTTLHGTAQAAQQAIGHGHV 154
+QA+ H + KE L+Q P L D+P + L +L + A
Sbjct: 737 KQAVHCIHAIFTNKEVQLAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFA---- 792
Query: 155 VLAHGPVLQAPAFAIVVDKLC--RLAGEEQGFLAHLDLGIEAAQAAAHAALEHGVIIVVG 212
P+ A IV D L R GE+ G L D + A A++ V ++G
Sbjct: 793 ----SPMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQAIKLLVRWLLG 848
Query: 213 VAQGLLEALQGLLEDAEAQEGIAHAQADLASELGTCPGTRQPKAGLAVGDGLVKLAQ 269
+ ++ L A + ++ DL +E + + LA G ++KLAQ
Sbjct: 849 MKNNQSKSANSTLRLLSA---MLVSEGDL-TEQKRISKSDMSRLRLAAGSAIMKLAQ 901
>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 34.3 bits (77), Expect = 0.28
Identities = 36/110 (32%), Positives = 42/110 (38%), Gaps = 16/110 (14%)
Query: 375 TWGDPWWLRASRHSWGRNHSASCP-PKRGNKSSVGWE--PEWGLDGEQAPPWEQSWFSPS 431
+WGD RA S G + A P P RG+ W P G AP SP
Sbjct: 7 SWGDQAGERARAPSGGGSGQAQRPGPGRGS-----WRRPPRRQRPGPAAP-------SPP 54
Query: 432 AAVAASWGHMASEECQQQGHHGPSQQPCQGAS-SSKWAGLGLEVLGGRRA 480
A AA+WG Q G G GA + G G + GGRRA
Sbjct: 55 ARGAAAWGRSGGGPAAQSGGDGGGLPRRAGAEPGGRGGGSGGTMPGGRRA 104
>gi|166795280 forkhead box N4 [Homo sapiens]
Length = 517
Score = 33.5 bits (75), Expect = 0.48
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 102 HGLIWKKEALLSQAPAPG---PHHLIPDLPPSPLPH 134
H + + L +PAP P H +PDL PSPLPH
Sbjct: 362 HHQVQPQAHLAPDSPAPAQTPPLHALPDLSPSPLPH 397
>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
Length = 1984
Score = 33.5 bits (75), Expect = 0.48
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 19/80 (23%)
Query: 391 RNHSAS----CPPKRGNKSSVGWEPEWGLDGEQAPPWEQSWFSPSAAVAASWGHMASEEC 446
R+HS S C P R N SS P E+SW SPS S +
Sbjct: 1581 RHHSPSQRSHCSPSRKNHSS---------------PSERSWRSPSQRNHCSPPERSCHSL 1625
Query: 447 QQQGHHGPSQQPCQGASSSK 466
++G H PSQ+ +G S +
Sbjct: 1626 SERGLHSPSQRSHRGPSQRR 1645
>gi|239756135 PREDICTED: similar to AGAP002076-PA [Homo sapiens]
Length = 522
Score = 33.1 bits (74), Expect = 0.62
Identities = 58/192 (30%), Positives = 74/192 (38%), Gaps = 50/192 (26%)
Query: 140 GTAQAAQQAIGHGHVVLAHGPV----LQAPAFAIV----------------VDKLCRLAG 179
G + AQQ I VL HGP L A +V VD L +L
Sbjct: 130 GQVELAQQVI-----VLGHGPFALVYLHQYAALVVRDGRLHRGAIGHRLVGVDALVQLLA 184
Query: 180 EEQGFLAHLDLGIEAAQAAAHAALEHGVIIVVGVAQGLLEALQG-------LLEDAEAQE 232
E+ LDLG + A H L+ ++ +GVAQ LL LQG L +A A++
Sbjct: 185 VEEILQQLLDLGDTSGAAHQHDLLDLA-LVQLGVAQRLLHRLQGPAKEVGIELLEAGARD 243
Query: 233 GIAHAQA-----DLASE--------LGTCPGTRQPKAGLAVGDG--LVKLAQLL--VAAC 275
G A DL + LG QP G VG LV +LL VA
Sbjct: 244 GRIEVHALVERVDLDARLRGRAQGALGALASGAQPPHGALVGPNVLLVLALELLRQVAHH 303
Query: 276 QVQVALQEEVGI 287
V L +VG+
Sbjct: 304 AVVEVLTAQVGV 315
>gi|239750666 PREDICTED: hypothetical protein XP_002347503 [Homo
sapiens]
Length = 522
Score = 33.1 bits (74), Expect = 0.62
Identities = 58/192 (30%), Positives = 74/192 (38%), Gaps = 50/192 (26%)
Query: 140 GTAQAAQQAIGHGHVVLAHGPV----LQAPAFAIV----------------VDKLCRLAG 179
G + AQQ I VL HGP L A +V VD L +L
Sbjct: 130 GQVELAQQVI-----VLGHGPFALVYLHQYAALVVRDGRLHRGAIGHRLVGVDALVQLLA 184
Query: 180 EEQGFLAHLDLGIEAAQAAAHAALEHGVIIVVGVAQGLLEALQG-------LLEDAEAQE 232
E+ LDLG + A H L+ ++ +GVAQ LL LQG L +A A++
Sbjct: 185 VEEILQQLLDLGDTSGAAHQHDLLDLA-LVQLGVAQRLLHRLQGPAKEVGIELLEAGARD 243
Query: 233 GIAHAQA-----DLASE--------LGTCPGTRQPKAGLAVGDG--LVKLAQLL--VAAC 275
G A DL + LG QP G VG LV +LL VA
Sbjct: 244 GRIEVHALVERVDLDARLRGRAQGALGALASGAQPPHGALVGPNVLLVLALELLRQVAHH 303
Query: 276 QVQVALQEEVGI 287
V L +VG+
Sbjct: 304 AVVEVLTAQVGV 315
>gi|239744976 PREDICTED: hypothetical protein XP_002343322 [Homo
sapiens]
Length = 522
Score = 33.1 bits (74), Expect = 0.62
Identities = 58/192 (30%), Positives = 74/192 (38%), Gaps = 50/192 (26%)
Query: 140 GTAQAAQQAIGHGHVVLAHGPV----LQAPAFAIV----------------VDKLCRLAG 179
G + AQQ I VL HGP L A +V VD L +L
Sbjct: 130 GQVELAQQVI-----VLGHGPFALVYLHQYAALVVRDGRLHRGAIGHRLVGVDALVQLLA 184
Query: 180 EEQGFLAHLDLGIEAAQAAAHAALEHGVIIVVGVAQGLLEALQG-------LLEDAEAQE 232
E+ LDLG + A H L+ ++ +GVAQ LL LQG L +A A++
Sbjct: 185 VEEILQQLLDLGDTSGAAHQHDLLDLA-LVQLGVAQRLLHRLQGPAKEVGIELLEAGARD 243
Query: 233 GIAHAQA-----DLASE--------LGTCPGTRQPKAGLAVGDG--LVKLAQLL--VAAC 275
G A DL + LG QP G VG LV +LL VA
Sbjct: 244 GRIEVHALVERVDLDARLRGRAQGALGALASGAQPPHGALVGPNVLLVLALELLRQVAHH 303
Query: 276 QVQVALQEEVGI 287
V L +VG+
Sbjct: 304 AVVEVLTAQVGV 315
>gi|38569493 potassium voltage-gated channel, subfamily H
(eag-related), member 3 [Homo sapiens]
Length = 1083
Score = 33.1 bits (74), Expect = 0.62
Identities = 35/116 (30%), Positives = 44/116 (37%), Gaps = 17/116 (14%)
Query: 301 LHTATHLLVAAHLRVGCDQAAQHAEAPHEVRALLQHLCPHLQCLLCLVGLVQLEPLLDLL 360
L A L++A H C +A+ P LLQ LC L+P +
Sbjct: 902 LRQAVQLVLAPHREGPCPRASGEGPCPASTSGLLQPLCVDTG-----ASSYCLQPPAGSV 956
Query: 361 LGLVLPHP---PQALCPTWGDPWWLRASRHS-WGR------NHSASCPPKRGNKSS 406
L PHP P L W PW AS+ S W R + S S PP G+ S
Sbjct: 957 LSGTWPHPRPGPPPLMAPW--PWGPPASQSSPWPRATAFWTSTSDSEPPASGDLCS 1010
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 32.7 bits (73), Expect = 0.82
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 385 SRHSWGRNHSASCPPKRGNKSSVGWEPEWGLDGEQAPPWEQSWFSPSAAVAASWGHMASE 444
SRHS R+H AS S VG G P ++W S + + S GH
Sbjct: 2527 SRHSGSRHHEASSRADSSGHSQVGQGQSEG------PRTSRNWGSSFSQDSDSQGHSEDS 2580
Query: 445 E----CQQQGHHGPSQQPCQGAS 463
E + HHG +Q+ + S
Sbjct: 2581 ERWSGSASRNHHGSAQEQLRDGS 2603
>gi|156938343 talin 2 [Homo sapiens]
Length = 2542
Score = 32.7 bits (73), Expect = 0.82
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 185 LAHLDLGIEAAQ---AAAHAALEHGVIIVVGVAQGLLEALQGLLE--DAEAQEGIAHAQA 239
LA G+ A+ AAAHA L+ ++ G A + EA Q L+ DAE Q+ +A
Sbjct: 1133 LAQAARGVAASTTDPAAAHAMLDSARDVMEGSAMLIQEAKQALIAPGDAERQQRLAQVAK 1192
Query: 240 DLASELGTC----PGTRQPKAGL-AVGDGLVKL 267
++ L C PG + L ++G+ KL
Sbjct: 1193 AVSHSLNNCVNCLPGQKDVDVALKSIGESSKKL 1225
>gi|116517332 STG protein [Homo sapiens]
Length = 325
Score = 32.7 bits (73), Expect = 0.82
Identities = 22/75 (29%), Positives = 25/75 (33%), Gaps = 3/75 (4%)
Query: 399 PKRGNKSSVGWEPEWGLDGEQAPPWEQSWFSPSAAVAASWGHMASEE---CQQQGHHGPS 455
P G + W P WGL + P E W +AA G EE P
Sbjct: 88 PPAGGSAVQRWPPSWGLPAMDSWPPEDPWQMMAAAAEDRLGEALPEELSYLSSAAALAPG 147
Query: 456 QQPCQGASSSKWAGL 470
P G SS GL
Sbjct: 148 SGPLPGESSPDATGL 162
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 32.0 bits (71), Expect = 1.4
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 106 WKKEALLSQAPAPGPHHLIPDLPPSPLPHLTTLHGTAQAAQQA 148
W + A S P+PGP H +P PPSP + G + ++A
Sbjct: 474 WHRPA--SPCPSPGPGHTLPPKPPSPRGTTASPKGRVRRKEEA 514
>gi|239755536 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 31.6 bits (70), Expect = 1.8
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 32/159 (20%)
Query: 151 HGHVVLAHGPVLQAPAFAIVVDKLCRLAGEEQGFLAHLDLGIEAAQAAA--HAALEHGVI 208
H VL +L A F +++ +L+ +GF+ + +GI A + H A +HG
Sbjct: 33 HSQKVLVEPALLPAVLFLALLELALQLS---EGFV-RVGVGIPDLHAPSILHLAAQHGE- 87
Query: 209 IVVGVAQGLLEALQGLLEDAEAQEGIAHAQADLAS-ELGTCPGTRQPKAGLAVGDGLVKL 267
LL EAQ+ A+LA LG P P+ LA L+ +
Sbjct: 88 ---------------LLPQGEAQQA-----ANLAPLPLGAAPVVTHPEEQLA----LLGV 123
Query: 268 AQLLVAACQVQVALQEEVGILQLPGRVDLDHSELHTATH 306
LL+ +V +Q +G L + G +++ +++ TH
Sbjct: 124 IVLLIVPIGHEVVVQSPIGHLWVEGAIEVALTQVAEETH 162
>gi|239749998 PREDICTED: hypothetical protein XP_002347249 [Homo
sapiens]
Length = 219
Score = 31.6 bits (70), Expect = 1.8
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 32/159 (20%)
Query: 151 HGHVVLAHGPVLQAPAFAIVVDKLCRLAGEEQGFLAHLDLGIEAAQAAA--HAALEHGVI 208
H VL +L A F +++ +L+ +GF+ + +GI A + H A +HG
Sbjct: 33 HSQKVLVEPALLPAVLFLALLELALQLS---EGFV-RVGVGIPDLHAPSILHLAAQHGE- 87
Query: 209 IVVGVAQGLLEALQGLLEDAEAQEGIAHAQADLAS-ELGTCPGTRQPKAGLAVGDGLVKL 267
LL EAQ+ A+LA LG P P+ LA L+ +
Sbjct: 88 ---------------LLPQGEAQQA-----ANLAPLPLGAAPVVTHPEEQLA----LLGV 123
Query: 268 AQLLVAACQVQVALQEEVGILQLPGRVDLDHSELHTATH 306
LL+ +V +Q +G L + G +++ +++ TH
Sbjct: 124 IVLLIVPIGHEVVVQSPIGHLWVEGAIEVALTQVAEETH 162
>gi|239744309 PREDICTED: hypothetical protein XP_002343114 [Homo
sapiens]
Length = 219
Score = 31.6 bits (70), Expect = 1.8
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 32/159 (20%)
Query: 151 HGHVVLAHGPVLQAPAFAIVVDKLCRLAGEEQGFLAHLDLGIEAAQAAA--HAALEHGVI 208
H VL +L A F +++ +L+ +GF+ + +GI A + H A +HG
Sbjct: 33 HSQKVLVEPALLPAVLFLALLELALQLS---EGFV-RVGVGIPDLHAPSILHLAAQHGE- 87
Query: 209 IVVGVAQGLLEALQGLLEDAEAQEGIAHAQADLAS-ELGTCPGTRQPKAGLAVGDGLVKL 267
LL EAQ+ A+LA LG P P+ LA L+ +
Sbjct: 88 ---------------LLPQGEAQQA-----ANLAPLPLGAAPVVTHPEEQLA----LLGV 123
Query: 268 AQLLVAACQVQVALQEEVGILQLPGRVDLDHSELHTATH 306
LL+ +V +Q +G L + G +++ +++ TH
Sbjct: 124 IVLLIVPIGHEVVVQSPIGHLWVEGAIEVALTQVAEETH 162
>gi|116812620 hypothetical protein LOC147965 [Homo sapiens]
Length = 349
Score = 31.2 bits (69), Expect = 2.4
Identities = 46/144 (31%), Positives = 56/144 (38%), Gaps = 8/144 (5%)
Query: 228 AEAQEGIAHAQADLASELGTCPGTRQPKAGLAVGDGL-VKLAQLLVAACQVQVALQEEVG 286
AEA EG A AQ LA G PG A GL V+LA L ++ +
Sbjct: 6 AEAWEGAAVAQDLLALGYGGVPGAASRGASCPDFRGLCVRLAAELATLGALEQQREAGAE 65
Query: 287 ILQLPGRVDLDHSELHTATHLLVAAH----LRVGCDQAAQHAEAPHEVRALLQHLCPHLQ 342
+L + L LL H G D AA E +R LL+ LC LQ
Sbjct: 66 VLSAGDGPGAEEDFLRQLGSLLRELHCPDRALCGGDGAAALREPGAGLR-LLRFLCSELQ 124
Query: 343 C--LLCLVGLVQLEPLLDLLLGLV 364
LLCL L+ P L G+V
Sbjct: 125 ATRLLCLRSLLDPSPRPPLGEGVV 148
>gi|239752661 PREDICTED: hypothetical protein [Homo sapiens]
Length = 85
Score = 30.8 bits (68), Expect = 3.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 10/53 (18%)
Query: 430 PSAAVAASWGHMASEECQQQGHHGPSQQP-------CQGASS---SKWAGLGL 472
P A+ A WG S EC+ GP Q P C+G + S+W GL
Sbjct: 2 PGASAWARWGDFGSPECKLYHFEGPRQAPQPPVHRGCRGDDAEGRSRWRTWGL 54
>gi|239741005 PREDICTED: hypothetical protein XP_002342062 [Homo
sapiens]
Length = 85
Score = 30.8 bits (68), Expect = 3.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 10/53 (18%)
Query: 430 PSAAVAASWGHMASEECQQQGHHGPSQQP-------CQGASS---SKWAGLGL 472
P A+ A WG S EC+ GP Q P C+G + S+W GL
Sbjct: 2 PGASAWARWGDFGSPECKLYHFEGPRQAPQPPVHRGCRGDDAEGRSRWRTWGL 54
>gi|226437571 abhydrolase domain containing 14A [Homo sapiens]
Length = 271
Score = 30.8 bits (68), Expect = 3.1
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 348 VGLVQLEPLLDLLLGLVLPHPPQALCPTWGDP 379
V L+ L LL LLL + LP PP+ WGDP
Sbjct: 35 VALLGLSLLLMLLLYVGLPGPPEQTSCLWGDP 66
>gi|197276594 RNA binding motif protein 20 [Homo sapiens]
Length = 1227
Score = 30.8 bits (68), Expect = 3.1
Identities = 44/164 (26%), Positives = 59/164 (35%), Gaps = 28/164 (17%)
Query: 23 PHNVRPQFPLQPFAAVNALAQT-VQLELAQLGPAGVESANPGHRIKSDLVPHLLGQILGS 81
P +V PL P A LAQ QL L +L A N + +L Q+L
Sbjct: 73 PFSVSNPNPLLPSPASLQLAQLQAQLTLHRLKLAQTAVTN------NTAAATVLNQVLSK 126
Query: 82 LDGIQSLEERLGQRQALGGFHGLI-------------WKKEALL----SQAPAPGPHHLI 124
+ Q L +L + G HG + A+ SQ PGP +
Sbjct: 127 VAMSQPLFNQLRHPSVITGPHGHAGVPQHAAAIPSTRFPSNAIAFSPPSQTRGPGPSMNL 186
Query: 125 PDLPPSPLPHLTTLHGTAQAAQQAIGHGHVVLAHGPVLQAPAFA 168
P+ PPS + +H Q G V+L G APA A
Sbjct: 187 PNQPPSAM----VMHPFTGVMPQTPGQPAVILGIGKTGPAPATA 226
>gi|115387099 brain-specific angiogenesis inhibitor 2 [Homo sapiens]
Length = 1585
Score = 30.8 bits (68), Expect = 3.1
Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 15/104 (14%)
Query: 371 ALCPTWG--DPW--WLRASRHSW--GRNHSASC-PPKRGNKSSVGWEPEWGLDGEQAPPW 423
A CP G + W W SR R+ +C PP+ G K+ G E + L A P
Sbjct: 359 ATCPVHGVWEEWGSWSLCSRSCGRGSRSRMRTCVPPQHGGKACEGPELQTKLCSMAACPV 418
Query: 424 EQSW-----FSPSAAVAASWGHMASEECQQQGHHGPSQQPCQGA 462
E W + P + A+ S +C GP+ C GA
Sbjct: 419 EGQWLEWGPWGPCSTSCANGTQQRSRKCSVA---GPAWATCTGA 459
>gi|21361937 proline rich 7 (synaptic) [Homo sapiens]
Length = 274
Score = 30.8 bits (68), Expect = 3.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Query: 128 PPSPLPHLTTLHGTAQAAQQAIGHGHVVLAHGP 160
PP P PH + L A A H H +L HGP
Sbjct: 74 PPQPPPHRSRLEAPAHAHSHPHVHVHPLLHHGP 106
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 30.0 bits (66), Expect = 5.3
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 26/172 (15%)
Query: 127 LPPSPLPHLTTLHGTAQAAQQA--------IGHGHVVLAHGPVLQAPAFAIVVDKLCRLA 178
+P + +P + + A+AA +A +G G + P F + V + +A
Sbjct: 359 IPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVA 418
Query: 179 GEEQ-------GFLAHLDLGIEAAQAAAHAALEHGVIIVVGVAQGLLEALQGLLEDAEAQ 231
G G + + + EA AAA A ++G++ VGVA G+ G+
Sbjct: 419 GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGV-----GVAPGVGVA 473
Query: 232 EGIAHAQADLASELGTCPGTR-QPKAGLAVGDGLVKLAQLLVAACQVQVALQ 282
G+ LA +G PG P G+A G G +A +A +V Q
Sbjct: 474 PGVG-----LAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQ 520
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 30.0 bits (66), Expect = 5.3
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 26/172 (15%)
Query: 127 LPPSPLPHLTTLHGTAQAAQQA--------IGHGHVVLAHGPVLQAPAFAIVVDKLCRLA 178
+P + +P + + A+AA +A +G G + P F + V + +A
Sbjct: 364 IPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVA 423
Query: 179 GEEQ-------GFLAHLDLGIEAAQAAAHAALEHGVIIVVGVAQGLLEALQGLLEDAEAQ 231
G G + + + EA AAA A ++G++ VGVA G+ G+
Sbjct: 424 GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGV-----GVAPGVGVA 478
Query: 232 EGIAHAQADLASELGTCPGTR-QPKAGLAVGDGLVKLAQLLVAACQVQVALQ 282
G+ LA +G PG P G+A G G +A +A +V Q
Sbjct: 479 PGVG-----LAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQ 525
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 30.0 bits (66), Expect = 5.3
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 26/172 (15%)
Query: 127 LPPSPLPHLTTLHGTAQAAQQA--------IGHGHVVLAHGPVLQAPAFAIVVDKLCRLA 178
+P + +P + + A+AA +A +G G + P F + V + +A
Sbjct: 349 IPGAAVPGVVSPEAAAKAAAKAAKYGARPGVGVGGIPTYGVGAGGFPGFGVGVGGIPGVA 408
Query: 179 GEEQ-------GFLAHLDLGIEAAQAAAHAALEHGVIIVVGVAQGLLEALQGLLEDAEAQ 231
G G + + + EA AAA A ++G++ VGVA G+ G+
Sbjct: 409 GVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGV-----GVAPGVGVA 463
Query: 232 EGIAHAQADLASELGTCPGTR-QPKAGLAVGDGLVKLAQLLVAACQVQVALQ 282
G+ LA +G PG P G+A G G +A +A +V Q
Sbjct: 464 PGVG-----LAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQ 510
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,870,363
Number of Sequences: 37866
Number of extensions: 1143788
Number of successful extensions: 3787
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 3745
Number of HSP's gapped (non-prelim): 82
length of query: 516
length of database: 18,247,518
effective HSP length: 107
effective length of query: 409
effective length of database: 14,195,856
effective search space: 5806105104
effective search space used: 5806105104
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.