LOC642612 20279

Name: LOC642612	Sequence: fasta or formatted (229aa)		NCBI GI: 239750141
Description: PREDICTED: similar to tripartite motif protein 39		Not currently referenced in the text
Other entries for this name: alt prot {229aa} PREDICTED: similar to tripartite motif protein 39
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.1 7 2 C cysteine 1.3 3 1 D aspartate 5.2 12 1 E glutamate 4.8 11 2 F phenylalanine 7.9 18 2 G glycine 6.1 14 1 H histidine 2.6 6 1 I isoleucine 3.5 8 1 K lysine 3.5 8 1 L leucine 10.0 23 3 M methionine 3.1 7 1 N asparagine 6.6 15 1 P proline 4.8 11 1 Q glutamine 1.7 4 1 R arginine 4.8 11 2 S serine 11.4 26 2 T threonine 4.4 10 2 V valine 8.7 20 1 W tryptophan 3.9 9 1 Y tyrosine 2.6 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to tripartite motif protein 39 [... LOC642612 0.989 PREDICTED: similar to tripartite motif protein 39 [... LOC283116 0.750 PREDICTED: similar to ring finger protein 18 isofor... LOC653192 0.680 PREDICTED: Tripartite motif-containing protein 43-li... TRIM43 0.680 tripartite motif-containing 43 LOC100290538 0.454 PREDICTED: hypothetical protein XP_002347266 LOC100292775 0.368 PREDICTED: similar to hCG2003752 TRIM77 0.331 PREDICTED: tripartite motif-containing 77 TRIM77 0.331 PREDICTED: tripartite motif-containing 77 LOC100289112 0.331 PREDICTED: hypothetical protein XP_002343148 TRIM77 0.331 tripartite motif-containing 77 LOC642446 0.309 PREDICTED: tripartite motif-containing protein 64B-... LOC283116 0.307 PREDICTED: similar to ring finger protein 18 isofor... LOC283116 0.307 PREDICTED: similar to ring finger protein 18 LOC283116 0.307 PREDICTED: similar to ring finger protein 18 TRIM64 0.305 tripartite motif-containing 64 LOC653111 0.303 PREDICTED: similar to ring finger protein 18 TRIM49 0.300 ring finger protein 18 LOC646754 0.298 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.298 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.298 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.298 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.298 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.298 PREDICTED: tripartite motif-containing protein 64C-... SPRYD5 0.287 SPRY domain containing 5 LOC729384 0.279 hypothetical protein LOC729384 LOC100134006 0.279 PREDICTED: similar to ring finger protein 18 isofor... LOC399939 0.279 PREDICTED: similar to ring finger protein 18 LOC100131392 0.279 PREDICTED: similar to ring finger protein 18 LOC399939 0.279 PREDICTED: similar to ring finger protein 18 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.