TRIM49 37838

Name: TRIM49	Sequence: fasta or formatted (452aa)		NCBI GI: 9966829
Description: ring finger protein 18		Referenced in: Testes and Sperm Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.0 18 2 C cysteine 5.1 23 2 D aspartate 3.5 16 1 E glutamate 8.0 36 3 F phenylalanine 5.1 23 1 G glycine 4.0 18 1 H histidine 5.1 23 2 I isoleucine 5.5 25 1 K lysine 6.2 28 3 L leucine 11.1 50 2 M methionine 3.3 15 1 N asparagine 4.9 22 2 P proline 4.4 20 2 Q glutamine 4.2 19 1 R arginine 5.5 25 1 S serine 6.4 29 3 T threonine 4.4 20 2 V valine 4.4 20 1 W tryptophan 2.0 9 1 Y tyrosine 2.9 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ring finger protein 18 LOC653111 0.995 PREDICTED: similar to ring finger protein 18 LOC283116 0.946 PREDICTED: similar to ring finger protein 18 isofor... LOC283116 0.946 PREDICTED: similar to ring finger protein 18 LOC283116 0.944 PREDICTED: similar to ring finger protein 18 LOC729384 0.836 hypothetical protein LOC729384 LOC100134006 0.836 PREDICTED: similar to ring finger protein 18 isofor... LOC399939 0.836 PREDICTED: similar to ring finger protein 18 LOC100131392 0.836 PREDICTED: similar to ring finger protein 18 LOC399939 0.836 PREDICTED: similar to ring finger protein 18 SPRYD5 0.739 SPRY domain containing 5 LOC120824 0.704 PREDICTED: similar to hCG1802386 LOC120824 0.704 PREDICTED: similar to hCG1802386 LOC120824 0.704 PREDICTED: similar to hCG1802386 LOC283116 0.686 PREDICTED: similar to ring finger protein 18 isofor... TRIM53 0.546 tripartite motif-containing 53 LOC642425 0.546 tripartite motif-containing 53-like LOC642425 0.546 PREDICTED: tripartite motif-containing 53-like [Hom... LOC340970 0.530 PREDICTED: similar to tripartite motif-containing 5... LOC340970 0.530 PREDICTED: similar to tripartite motif-containing 5... LOC340970 0.530 PREDICTED: similar to tripartite motif-containing 5... TRIM43 0.463 tripartite motif-containing 43 LOC653192 0.452 PREDICTED: Tripartite motif-containing protein 43-li... LOC642446 0.393 PREDICTED: tripartite motif-containing protein 64B-... TRIM64 0.392 tripartite motif-containing 64 LOC646754 0.368 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.368 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.368 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.354 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.354 PREDICTED: tripartite motif-containing protein 64C-... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.