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Search of human proteins with 239755246
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755246 PREDICTED: hypothetical protein XP_002344510 [Homo
sapiens]
(120 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755246 PREDICTED: hypothetical protein XP_002344510 [Homo ... 244 8e-66
gi|239749756 PREDICTED: hypothetical protein [Homo sapiens] 244 8e-66
gi|239744015 PREDICTED: hypothetical protein XP_002343005 [Homo ... 244 8e-66
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 35 0.010
gi|20336305 B-cell CLL/lymphoma 11A isoform 1 [Homo sapiens] 34 0.022
gi|20336307 B-cell CLL/lymphoma 11A isoform 2 [Homo sapiens] 34 0.022
gi|50811873 suppressor of hairy wing homolog 4 isoform 2 [Homo s... 34 0.022
gi|50811871 suppressor of hairy wing homolog 4 isoform 1 [Homo s... 34 0.022
gi|239749372 PREDICTED: hypothetical protein XP_002347017 [Homo ... 34 0.029
gi|239743509 PREDICTED: hypothetical protein XP_002342878 [Homo ... 34 0.029
gi|44890065 hypothetical protein LOC6936 [Homo sapiens] 33 0.050
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 32 0.085
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 32 0.085
gi|32455236 helicase (DNA) B [Homo sapiens] 32 0.11
gi|239757699 PREDICTED: hypothetical protein [Homo sapiens] 32 0.14
gi|239752184 PREDICTED: hypothetical protein XP_002348161 [Homo ... 32 0.14
gi|239746707 PREDICTED: hypothetical protein XP_002343834 [Homo ... 32 0.14
gi|239754641 PREDICTED: hypothetical protein [Homo sapiens] 31 0.19
gi|239749183 PREDICTED: hypothetical protein XP_002346949 [Homo ... 31 0.19
gi|239747677 PREDICTED: hypothetical protein [Homo sapiens] 31 0.19
gi|239743263 PREDICTED: hypothetical protein XP_002342813 [Homo ... 31 0.19
gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo ... 31 0.19
gi|239508944 PREDICTED: hypothetical protein [Homo sapiens] 31 0.19
gi|157278361 nuclear localized factor 2 [Homo sapiens] 31 0.19
gi|239757677 PREDICTED: hypothetical protein [Homo sapiens] 31 0.25
gi|239752167 PREDICTED: hypothetical protein [Homo sapiens] 31 0.25
gi|239746688 PREDICTED: hypothetical protein [Homo sapiens] 31 0.25
gi|46909590 a disintegrin and metalloproteinase domain 15 isofor... 31 0.25
gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithora... 31 0.25
gi|195927017 phosphatidylinositol transfer protein, membrane-ass... 31 0.25
>gi|239755246 PREDICTED: hypothetical protein XP_002344510 [Homo
sapiens]
Length = 120
Score = 244 bits (624), Expect = 8e-66
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MFRPQTRLEHRLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRI 60
MFRPQTRLEHRLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRI
Sbjct: 1 MFRPQTRLEHRLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRI 60
Query: 61 QLRAEPSGLPNTASSAWASSRLWNAARRRSVKALESKERGSASIWKPFCTDSESSIVSAP 120
QLRAEPSGLPNTASSAWASSRLWNAARRRSVKALESKERGSASIWKPFCTDSESSIVSAP
Sbjct: 61 QLRAEPSGLPNTASSAWASSRLWNAARRRSVKALESKERGSASIWKPFCTDSESSIVSAP 120
>gi|239749756 PREDICTED: hypothetical protein [Homo sapiens]
Length = 385
Score = 244 bits (624), Expect = 8e-66
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MFRPQTRLEHRLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRI 60
MFRPQTRLEHRLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRI
Sbjct: 1 MFRPQTRLEHRLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRI 60
Query: 61 QLRAEPSGLPNTASSAWASSRLWNAARRRSVKALESKERGSASIWKPFCTDSESSIVSAP 120
QLRAEPSGLPNTASSAWASSRLWNAARRRSVKALESKERGSASIWKPFCTDSESSIVSAP
Sbjct: 61 QLRAEPSGLPNTASSAWASSRLWNAARRRSVKALESKERGSASIWKPFCTDSESSIVSAP 120
>gi|239744015 PREDICTED: hypothetical protein XP_002343005 [Homo
sapiens]
Length = 385
Score = 244 bits (624), Expect = 8e-66
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MFRPQTRLEHRLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRI 60
MFRPQTRLEHRLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRI
Sbjct: 1 MFRPQTRLEHRLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRI 60
Query: 61 QLRAEPSGLPNTASSAWASSRLWNAARRRSVKALESKERGSASIWKPFCTDSESSIVSAP 120
QLRAEPSGLPNTASSAWASSRLWNAARRRSVKALESKERGSASIWKPFCTDSESSIVSAP
Sbjct: 61 QLRAEPSGLPNTASSAWASSRLWNAARRRSVKALESKERGSASIWKPFCTDSESSIVSAP 120
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 35.4 bits (80), Expect = 0.010
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 19 LGGKPGQERGR--RAKPGDFLFPGLSPSRSAGSSSPSAPPPRRIQLRAEPSGL 69
LG PG +RGR + PG LFP P P PPP + +R PS L
Sbjct: 52 LGRGPGHDRGRDRHSPPGCHLFPPPPPPPPPLPPPPPPPPPDKDDIRLLPSAL 104
>gi|20336305 B-cell CLL/lymphoma 11A isoform 1 [Homo sapiens]
Length = 835
Score = 34.3 bits (77), Expect = 0.022
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 24 GQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRIQLRAE----PSGLPNTAS--SAW 77
G GR PG+ GLS GS S +P +RI+L E P+ +PNT + S W
Sbjct: 600 GTVNGRGCSPGESASGGLSKKLLLGSPSSLSPFSKRIKLEKEFDLPPAAMPNTENVYSQW 659
Query: 78 ASSRLWNAARRRSVKALESKERGSASIWKPFCTDSESS 115
+ + A+R+ L + S PF + SE S
Sbjct: 660 LAG--YAASRQLKDPFLSFGD----SRQSPFASSSEHS 691
>gi|20336307 B-cell CLL/lymphoma 11A isoform 2 [Homo sapiens]
Length = 773
Score = 34.3 bits (77), Expect = 0.022
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 24 GQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRIQLRAE----PSGLPNTAS--SAW 77
G GR PG+ GLS GS S +P +RI+L E P+ +PNT + S W
Sbjct: 600 GTVNGRGCSPGESASGGLSKKLLLGSPSSLSPFSKRIKLEKEFDLPPAAMPNTENVYSQW 659
Query: 78 ASSRLWNAARRRSVKALESKERGSASIWKPFCTDSESS 115
+ + A+R+ L + S PF + SE S
Sbjct: 660 LAG--YAASRQLKDPFLSFGD----SRQSPFASSSEHS 691
>gi|50811873 suppressor of hairy wing homolog 4 isoform 2 [Homo
sapiens]
Length = 966
Score = 34.3 bits (77), Expect = 0.022
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 10 HRLYKRTKRLGG-KPGQERGRRAKPGDFLFPGLSP--SRSAGSSSPSAPPPRRIQLRAEP 66
HR + + K+L G PG + RA G L G SP S SA +S+ PPR + A+
Sbjct: 485 HRTFIKPKQLEGLPPGTKVTIRASVGP-LQSGASPTPSISASASTLQLSPPRTKNITAKN 543
Query: 67 SGLPNTASSAWASSRLWNAARRRSVKALESKERGSASIWKP 107
NT+ N + + K SK GS S +KP
Sbjct: 544 PAKSNTSKP--------NTVKSNASKPNTSKPNGSKSKYKP 576
>gi|50811871 suppressor of hairy wing homolog 4 isoform 1 [Homo
sapiens]
Length = 979
Score = 34.3 bits (77), Expect = 0.022
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 10 HRLYKRTKRLGG-KPGQERGRRAKPGDFLFPGLSP--SRSAGSSSPSAPPPRRIQLRAEP 66
HR + + K+L G PG + RA G L G SP S SA +S+ PPR + A+
Sbjct: 498 HRTFIKPKQLEGLPPGTKVTIRASVGP-LQSGASPTPSISASASTLQLSPPRTKNITAKN 556
Query: 67 SGLPNTASSAWASSRLWNAARRRSVKALESKERGSASIWKP 107
NT+ N + + K SK GS S +KP
Sbjct: 557 PAKSNTSKP--------NTVKSNASKPNTSKPNGSKSKYKP 589
>gi|239749372 PREDICTED: hypothetical protein XP_002347017 [Homo
sapiens]
Length = 212
Score = 33.9 bits (76), Expect = 0.029
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 41 LSPSRSAGSSSPSAPPPRRIQLRAEPSGLPNTASSAWASSRLWNAARRRSVKAL 94
L P+R+A + PSAP P R LR S L T + A+++L AARR L
Sbjct: 71 LVPARAATPAPPSAPAPARPSLRLGSSSL--TGGACCATAQLTAAARRTKATQL 122
>gi|239743509 PREDICTED: hypothetical protein XP_002342878 [Homo
sapiens]
Length = 212
Score = 33.9 bits (76), Expect = 0.029
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 41 LSPSRSAGSSSPSAPPPRRIQLRAEPSGLPNTASSAWASSRLWNAARRRSVKAL 94
L P+R+A + PSAP P R LR S L T + A+++L AARR L
Sbjct: 71 LVPARAATPAPPSAPAPARPSLRLGSSSL--TGGACCATAQLTAAARRTKATQL 122
>gi|44890065 hypothetical protein LOC6936 [Homo sapiens]
Length = 781
Score = 33.1 bits (74), Expect = 0.050
Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 6/109 (5%)
Query: 8 LEHRLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRIQLRAEPS 67
+ HR + ++ G P + PG S+ PP RA+ +
Sbjct: 1 MAHRPKRTFRQRAADSSDSDGAEESPAE---PGAPRELPVPGSAEEEPPSGGG--RAQVA 55
Query: 68 GLPNTASSAWASSRLWNAARRRSVKALESKERGSASIWKPFCTDSESSI 116
GLP+ R+W A+ RR+ KA + GS S TD E I
Sbjct: 56 GLPHRVRGPRGRGRVW-ASSRRATKAAPRADEGSESRTLDVSTDEEDKI 103
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 32.3 bits (72), Expect = 0.085
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 42 SPSRSAGSSSPSAPPPRRIQLRAEPSGLPNTASSAWASS 80
+PSR++ + PS P RA P+G P+TAS SS
Sbjct: 343 TPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGLSS 381
Score = 31.2 bits (69), Expect = 0.19
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 39 PGLSPSRSAGSSSPSAPPPRRIQLRAEPSGLPNTASSAWASSRLWNAARRRSVKALESKE 98
P +PSR++ + + S P A P+G P+TAS + SR + R +A +K
Sbjct: 448 PTGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRA--SLTRTPSRASLTKM 505
Query: 99 RGSASIWK------PFCTDSESSIVSAP 120
+ASI + P T S +S +P
Sbjct: 506 ESTASITRTPSRASPTWTPSTASPTGSP 533
Score = 30.0 bits (66), Expect = 0.42
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 39 PGLSPSRSAGSSSPSAPPPRRIQLRAEPSGLPNTASSAWASS 80
P +P R++ + +PS P Q A P+G P+TAS + S
Sbjct: 439 PTGTPPRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPS 480
Score = 28.9 bits (63), Expect = 0.94
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Query: 39 PGLSPSRSAGSSSPSAPPPRRIQL----RAEPSGLPNTASSAWASSR 81
P SP+ + +SP+ PPR RA P+G P AS SR
Sbjct: 623 PRASPTETPPRASPTGTPPRASPTGTPPRASPTGTPPRASPTGTPSR 669
Score = 28.5 bits (62), Expect = 1.2
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 18/83 (21%)
Query: 42 SPSRSAGSSSPSAPPPRRIQL----RAEPSGLPNTASSAWASSRLWNAARRRSVKALESK 97
SP+R+ +SP+ PPR RA P+G +TAS + S +
Sbjct: 429 SPTRTPPRASPTGTPPRASPTGTPSRASPTGTQSTASPTGSPS--------------TAS 474
Query: 98 ERGSASIWKPFCTDSESSIVSAP 120
GS S P + S +S+ P
Sbjct: 475 PTGSPSTASPTGSPSRASLTRTP 497
Score = 27.3 bits (59), Expect = 2.7
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 41 LSPSRSAGSSSPSAPPPRRIQLRAEPSGLPNTAS 74
++PS ++ + +P P + R P+G+P+TAS
Sbjct: 168 MTPSTASLTRTPPRASPTGMPSRTSPTGMPSTAS 201
Score = 27.3 bits (59), Expect = 2.7
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Query: 39 PGLSPSRSAGSSSPSAPPPRRIQL----RAEPSGLPNTAS 74
P SP+ + +SP+ PPR RA P+G P+ AS
Sbjct: 632 PRASPTGTPPRASPTGTPPRASPTGTPPRASPTGTPSRAS 671
Score = 26.9 bits (58), Expect = 3.6
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 39 PGLSPSRSAGSSSPSAPPPRRIQLRAEPSGLPNTASSAWASSR--LWNAARRRSVKALES 96
P +PSR++ + +PS RA +G P+TAS SR L R S+K S
Sbjct: 4 PTRTPSRASPTRTPSTASLTGTPSRASLTGTPSTASLMGTPSRASLTGTPPRASLKGTTS 63
Score = 26.2 bits (56), Expect = 6.1
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 39 PGLSPSRSAGSSSPSAPPPRRIQLRAEPSGLPNTASSAWASSRLWNAARRRSVKALESKE 98
P SPSR++ + +PS +++ A + P+ AS W S + A+ S
Sbjct: 484 PTGSPSRASLTRTPSRASLTKMESTASITRTPSRASPTWTPSTASPTGSPSTALAMGSPS 543
Query: 99 RGSASIWKPFCTDSESSIVSAP 120
R + + T S +S+ P
Sbjct: 544 RAALT-----RTPSRASLTRTP 560
Score = 25.8 bits (55), Expect = 7.9
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 39 PGLSPSRSAGSSSPSAPPPRRIQLRAEPSGLPNTAS--SAWASSRLWNAARRRSVKALES 96
P +PSR++ S +PS R+ RA P+G+ + S +++ + R S+ S
Sbjct: 286 PTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISRTPPRASITRTPS 345
Query: 97 K--ERGSASIWKPFCTDSESSIVSAP 120
+ G S P T S +S +P
Sbjct: 346 RASPTGKPSTASPTGTPSRASPTGSP 371
Score = 25.8 bits (55), Expect = 7.9
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 5/28 (17%)
Query: 47 AGSSSPSAPPPRRIQLRAEPSGLPNTAS 74
+ ++SP+ PPR A P+G P+TAS
Sbjct: 380 SSTASPTGTPPR-----ASPTGTPSTAS 402
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo
sapiens]
Length = 1747
Score = 32.3 bits (72), Expect = 0.085
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 12 LYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRIQLRAEPSG--- 68
LY+ LG P ER +RA+ L S A P+A PP R + R P G
Sbjct: 886 LYEPGAALGPLPYPERQKRARSMIILQDSAPESGDAPRPPPAATPPERPKRRPRPPGPDS 945
Query: 69 ----LPNTASSAWASSRLWNAARRRS--VKAL---ESKERGSASIWKP 107
L ++S +A S+ RR+S VK L +++ER + ++ P
Sbjct: 946 PYANLGAFSASLFAPSK---PQRRKSPLVKQLQVEDAQERAALAVGSP 990
>gi|32455236 helicase (DNA) B [Homo sapiens]
Length = 1087
Score = 32.0 bits (71), Expect = 0.11
Identities = 29/102 (28%), Positives = 36/102 (35%), Gaps = 22/102 (21%)
Query: 2 FRPQTRLEHRLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRIQ 61
F +TRL+H L + G A P DF P S S G S+PSA P
Sbjct: 941 FPRKTRLKHFLQSKLSSSG----------APPADFPSPRKSSGDSGGPSTPSASP----- 985
Query: 62 LRAEPSGLPNTASSAWASSRLWNAARRRSVKALESKERGSAS 103
LP A + W+ A + L ER S
Sbjct: 986 -------LPVVTDHAMTNDVTWSEASSPDERTLTFAERWQLS 1020
>gi|239757699 PREDICTED: hypothetical protein [Homo sapiens]
Length = 270
Score = 31.6 bits (70), Expect = 0.14
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 6 TRLEHRLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRIQLRAE 65
TR RL+ RL + ++ GRRA PG+ PGL R++ R +
Sbjct: 170 TRDRRRLWGEGLRLAPRRSRDEGRRASPGNLASPGL-----------------RLRCRLD 212
Query: 66 PSGLP----NTASSAWASSRLWNAARRRSVKALESKERGSASIW 105
GL SS+ SS SV L + E GS IW
Sbjct: 213 LPGLGLRDLGARSSSVLSSSPSELVPELSVLLLANSEEGS-EIW 255
>gi|239752184 PREDICTED: hypothetical protein XP_002348161 [Homo
sapiens]
Length = 270
Score = 31.6 bits (70), Expect = 0.14
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 6 TRLEHRLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRIQLRAE 65
TR RL+ RL + ++ GRRA PG+ PGL R++ R +
Sbjct: 170 TRDRRRLWGEGLRLAPRRSRDEGRRASPGNLASPGL-----------------RLRCRLD 212
Query: 66 PSGLP----NTASSAWASSRLWNAARRRSVKALESKERGSASIW 105
GL SS+ SS SV L + E GS IW
Sbjct: 213 LPGLGLRDLGARSSSVLSSSPSELVPELSVLLLANSEEGS-EIW 255
>gi|239746707 PREDICTED: hypothetical protein XP_002343834 [Homo
sapiens]
Length = 270
Score = 31.6 bits (70), Expect = 0.14
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 22/104 (21%)
Query: 6 TRLEHRLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSPSRSAGSSSPSAPPPRRIQLRAE 65
TR RL+ RL + ++ GRRA PG+ PGL R++ R +
Sbjct: 170 TRDRRRLWGEGLRLAPRRSRDEGRRASPGNLASPGL-----------------RLRCRLD 212
Query: 66 PSGLP----NTASSAWASSRLWNAARRRSVKALESKERGSASIW 105
GL SS+ SS SV L + E GS IW
Sbjct: 213 LPGLGLRDLGARSSSVLSSSPSELVPELSVLLLANSEEGS-EIW 255
>gi|239754641 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 31.2 bits (69), Expect = 0.19
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 34 GDFLFPGLSPSRSAGSSSPSAPPPRRIQLRAEPSGLPNTASSAWASSRLWNAARRRS 90
GDFLF S SR S S + PP L P+ P SA R W + RRS
Sbjct: 9 GDFLFS--SRSRFVFSVSEPSRPPVNFLLTLSPACRPRPRCSAEGWRRCWRRSPRRS 63
>gi|239749183 PREDICTED: hypothetical protein XP_002346949 [Homo
sapiens]
Length = 229
Score = 31.2 bits (69), Expect = 0.19
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 34 GDFLFPGLSPSRSAGSSSPSAPPPRRIQLRAEPSGLPNTASSAWASSRLWNAARRRS 90
GDFLF S SR S S + PP L P+ P SA R W + RRS
Sbjct: 9 GDFLFS--SRSRFVFSVSEPSRPPVNFLLTLSPACRPRPRCSAEGWRRCWRRSPRRS 63
>gi|239747677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 31.2 bits (69), Expect = 0.19
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 41 LSPSRSAGSSSPSAPPPRRIQLRAEPSGLP 70
+SP+ G+S+P PPPR Q RA P+ P
Sbjct: 99 MSPTHFHGASAPPPPPPRLAQPRAGPAPPP 128
>gi|239743263 PREDICTED: hypothetical protein XP_002342813 [Homo
sapiens]
Length = 229
Score = 31.2 bits (69), Expect = 0.19
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 34 GDFLFPGLSPSRSAGSSSPSAPPPRRIQLRAEPSGLPNTASSAWASSRLWNAARRRS 90
GDFLF S SR S S + PP L P+ P SA R W + RRS
Sbjct: 9 GDFLFS--SRSRFVFSVSEPSRPPVNFLLTLSPACRPRPRCSAEGWRRCWRRSPRRS 63
>gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo
sapiens]
Length = 262
Score = 31.2 bits (69), Expect = 0.19
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 41 LSPSRSAGSSSPSAPPPRRIQLRAEPSGLP 70
+SP+ G+S+P PPPR Q RA P+ P
Sbjct: 99 MSPTHFHGASAPPPPPPRLAQPRAGPAPPP 128
>gi|239508944 PREDICTED: hypothetical protein [Homo sapiens]
Length = 229
Score = 31.2 bits (69), Expect = 0.19
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 34 GDFLFPGLSPSRSAGSSSPSAPPPRRIQLRAEPSGLPNTASSAWASSRLWNAARRRS 90
GDFLF S SR S S + PP L P+ P SA R W + RRS
Sbjct: 9 GDFLFS--SRSRFVFSVSEPSRPPVNFLLTLSPACRPRPRCSAEGWRRCWRRSPRRS 63
>gi|157278361 nuclear localized factor 2 [Homo sapiens]
Length = 364
Score = 31.2 bits (69), Expect = 0.19
Identities = 39/125 (31%), Positives = 45/125 (36%), Gaps = 19/125 (15%)
Query: 10 HRLYKRTKRLGGKP---------GQERGRRAKPGDFLFP-GLSPSRSAGSSSPSAPP--- 56
H K + LGG P G G A G P G P+ A P P
Sbjct: 108 HTRRKESLLLGGPPAPRPRAHSCGGGGGPDAPLGTLCGPRGPGPATPAAPGGPRLPQDAL 167
Query: 57 ---PRRIQLRAEPSGLPNTASSAWASSRLWNAARRRSVKALESKERGSASIWKPFCTDSE 113
PRR +L P GL + A A S RL AR RSV + E A P S
Sbjct: 168 AAGPRRCRLLRVPDGLLSRALRAGRSRRL---ARVRSVSSGNEDEERRAGSESPARAPSS 224
Query: 114 SSIVS 118
S + S
Sbjct: 225 SPLSS 229
>gi|239757677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 30.8 bits (68), Expect = 0.25
Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 21/77 (27%)
Query: 25 QERGRRAKPGDFLFPGLS------------PSRSAGSSSPSAP---------PPRRIQLR 63
+ER R A+P D + P S P S S P P PP + R
Sbjct: 31 EERARSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSR 90
Query: 64 AEPSGLPNTASSAWASS 80
GLP +S W SS
Sbjct: 91 QTWGGLPVACASCWVSS 107
>gi|239752167 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 30.8 bits (68), Expect = 0.25
Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 21/77 (27%)
Query: 25 QERGRRAKPGDFLFPGLS------------PSRSAGSSSPSAP---------PPRRIQLR 63
+ER R A+P D + P S P S S P P PP + R
Sbjct: 31 EERARSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSR 90
Query: 64 AEPSGLPNTASSAWASS 80
GLP +S W SS
Sbjct: 91 QTWGGLPVACASCWVSS 107
>gi|239746688 PREDICTED: hypothetical protein [Homo sapiens]
Length = 152
Score = 30.8 bits (68), Expect = 0.25
Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 21/77 (27%)
Query: 25 QERGRRAKPGDFLFPGLS------------PSRSAGSSSPSAP---------PPRRIQLR 63
+ER R A+P D + P S P S S P P PP + R
Sbjct: 31 EERARSARPSDLVGPRTSTSGPSHRPPPAPPPSSVQESPPQLPARNPSSGGHPPLPVPSR 90
Query: 64 AEPSGLPNTASSAWASS 80
GLP +S W SS
Sbjct: 91 QTWGGLPVACASCWVSS 107
>gi|46909590 a disintegrin and metalloproteinase domain 15 isoform 2
preproprotein [Homo sapiens]
Length = 814
Score = 30.8 bits (68), Expect = 0.25
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 11 RLYKRTKRLGGKPGQERGRRAKPGDFLFPGLSP--SRSAGSSSPSAPPPRRIQLRAEPSG 68
RL++R +L G Q R ++ P + P +R S P+ PPP R L A+P G
Sbjct: 720 RLHQRLCQLKGPTCQYRAAQSGPSERPGPPQRALLARGTKSQGPAKPPPPRKPLPADPQG 779
>gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 6 [Homo sapiens]
Length = 1093
Score = 30.8 bits (68), Expect = 0.25
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 4 PQTRLEHRLYKRTKRLGGKPGQERGRRAKPGDF--LFPGLSPSRSAGSSSPSAPP 56
P+T L+ + +K +KR PG+ +G R K G P L ++ AG ++ +A P
Sbjct: 459 PETGLKEKKHKASKRSRHGPGRPKGSRNKEGTGGPAAPSLPSAQLAGFTATAASP 513
>gi|195927017 phosphatidylinositol transfer protein,
membrane-associated isoform b [Homo sapiens]
Length = 1243
Score = 30.8 bits (68), Expect = 0.25
Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 14/80 (17%)
Query: 21 GKPGQERGRRAKPGDFLFPGLSPSRSA----------GSSSPSAPPPRRI---QLRAEPS 67
G G R R + + L P P R GS PSA PP+RI EP
Sbjct: 584 GSRGSSR-RGSMNNELLSPEFGPVRDPLADGVEGLGRGSPEPSALPPQRIPSDMASPEPE 642
Query: 68 GLPNTASSAWASSRLWNAAR 87
G N+ +A A++ W R
Sbjct: 643 GSQNSLQAAPATTSSWEPRR 662
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,793,772
Number of Sequences: 37866
Number of extensions: 310872
Number of successful extensions: 2345
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 212
Number of HSP's that attempted gapping in prelim test: 2077
Number of HSP's gapped (non-prelim): 465
length of query: 120
length of database: 18,247,518
effective HSP length: 89
effective length of query: 31
effective length of database: 14,877,444
effective search space: 461200764
effective search space used: 461200764
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.