Search of human proteins with 239754887

Search of human proteins with 239754887

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754887 PREDICTED: hypothetical protein XP_002346152 [Homo
sapiens]
         (517 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754887 PREDICTED: hypothetical protein XP_002346152 [Homo ...  1034   0.0  
gi|239749426 PREDICTED: hypothetical protein XP_002347042 [Homo ...  1032   0.0  
gi|239743560 PREDICTED: hypothetical protein XP_002342893 [Homo ...  1032   0.0  
gi|169173078 PREDICTED: hypothetical protein [Homo sapiens]           153   3e-37
gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]           153   4e-37
gi|169173306 PREDICTED: hypothetical protein [Homo sapiens]           112   6e-25
gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]                  44   5e-04
gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]                  44   5e-04
gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]                  44   5e-04
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]            42   0.001
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]            42   0.001
gi|226437602 NK1 homeobox 2 [Homo sapiens]                             42   0.002
gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]            39   0.009
gi|239746684 PREDICTED: hypothetical protein XP_002343812 [Homo ...    39   0.009
gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo ...    39   0.009
gi|208431817 protein kinase-like protein SgK493 [Homo sapiens]         39   0.015
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ...    38   0.025
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ...    38   0.025
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ...    38   0.025
gi|19263349 Cbp/p300-interacting transactivator, with Glu/Asp-ri...    37   0.043
gi|24308458 Lix1 homolog (mouse) like [Homo sapiens]                   37   0.043
gi|239749631 PREDICTED: hypothetical protein [Homo sapiens]            36   0.074
gi|239743906 PREDICTED: hypothetical protein XP_002342988 [Homo ...    36   0.074
gi|239046743 Nedd4 family interacting protein 2 isoform 2 [Homo ...    35   0.13 
gi|239046738 Nedd4 family interacting protein 2 isoform 1 [Homo ...    35   0.13 
gi|40806216 visual system homeobox 1 isoform b [Homo sapiens]          35   0.13 
gi|11056038 visual system homeobox 1 isoform a [Homo sapiens]          35   0.13 
gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo s...    35   0.13 
gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo s...    35   0.13 
gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo s...    35   0.13 

>gi|239754887 PREDICTED: hypothetical protein XP_002346152 [Homo
           sapiens]
          Length = 517

 Score = 1034 bits (2673), Expect = 0.0
 Identities = 517/517 (100%), Positives = 517/517 (100%)

Query: 1   MAAKGKTESSWADYDENAKCNLSTALNLGWLGRIRDLSHVRIVAVIYRGAGVGHHRGNGP 60
           MAAKGKTESSWADYDENAKCNLSTALNLGWLGRIRDLSHVRIVAVIYRGAGVGHHRGNGP
Sbjct: 1   MAAKGKTESSWADYDENAKCNLSTALNLGWLGRIRDLSHVRIVAVIYRGAGVGHHRGNGP 60

Query: 61  VAVGEIHTGVMPLVGEAHLRLAHEVQILFKFRAVHLPEELGGLTGVRAVPAGQCLRRGRR 120
           VAVGEIHTGVMPLVGEAHLRLAHEVQILFKFRAVHLPEELGGLTGVRAVPAGQCLRRGRR
Sbjct: 61  VAVGEIHTGVMPLVGEAHLRLAHEVQILFKFRAVHLPEELGGLTGVRAVPAGQCLRRGRR 120

Query: 121 LSGARGVVLVLVLVLVLRLHLEAAPAARPGRAHRAVVHVKGAGWRQEARNRGTRGLWAES 180
           LSGARGVVLVLVLVLVLRLHLEAAPAARPGRAHRAVVHVKGAGWRQEARNRGTRGLWAES
Sbjct: 121 LSGARGVVLVLVLVLVLRLHLEAAPAARPGRAHRAVVHVKGAGWRQEARNRGTRGLWAES 180

Query: 181 GVHGTGGRLRGASVVRDLRVAVGAGRRAVPGHRGGEESRVGVHAVQRGRVGRGQRVAVER 240
           GVHGTGGRLRGASVVRDLRVAVGAGRRAVPGHRGGEESRVGVHAVQRGRVGRGQRVAVER
Sbjct: 181 GVHGTGGRLRGASVVRDLRVAVGAGRRAVPGHRGGEESRVGVHAVQRGRVGRGQRVAVER 240

Query: 241 RRAQTLAVAVVAAHVRRQQRRAGGEALLGELEAQAVHGHAAALGAQRGRLRLSQAVQEAA 300
           RRAQTLAVAVVAAHVRRQQRRAGGEALLGELEAQAVHGHAAALGAQRGRLRLSQAVQEAA
Sbjct: 241 RRAQTLAVAVVAAHVRRQQRRAGGEALLGELEAQAVHGHAAALGAQRGRLRLSQAVQEAA 300

Query: 301 LHPLQPLHLLAPPRPVLVVGVVLHVLHAQPLCLLHEGPLLRQRQRLPRLACTHLAQLGVV 360
           LHPLQPLHLLAPPRPVLVVGVVLHVLHAQPLCLLHEGPLLRQRQRLPRLACTHLAQLGVV
Sbjct: 301 LHPLQPLHLLAPPRPVLVVGVVLHVLHAQPLCLLHEGPLLRQRQRLPRLACTHLAQLGVV 360

Query: 361 QVWILLRQPLALVLSPHHESVHRPPDTGLALGSARGPGRCSAVRRRLALHLHVPDGAQRL 420
           QVWILLRQPLALVLSPHHESVHRPPDTGLALGSARGPGRCSAVRRRLALHLHVPDGAQRL
Sbjct: 361 QVWILLRQPLALVLSPHHESVHRPPDTGLALGSARGPGRCSAVRRRLALHLHVPDGAQRL 420

Query: 421 GPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQPSAGRAASPDPGEGVGN 480
           GPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQPSAGRAASPDPGEGVGN
Sbjct: 421 GPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQPSAGRAASPDPGEGVGN 480

Query: 481 EALRCPEGCAGLPARSRRPCSGLSRSGLQRTQGPQPA 517
           EALRCPEGCAGLPARSRRPCSGLSRSGLQRTQGPQPA
Sbjct: 481 EALRCPEGCAGLPARSRRPCSGLSRSGLQRTQGPQPA 517


>gi|239749426 PREDICTED: hypothetical protein XP_002347042 [Homo
           sapiens]
          Length = 517

 Score = 1032 bits (2668), Expect = 0.0
 Identities = 516/517 (99%), Positives = 517/517 (100%)

Query: 1   MAAKGKTESSWADYDENAKCNLSTALNLGWLGRIRDLSHVRIVAVIYRGAGVGHHRGNGP 60
           MAAKGKTESSWADYDENAKCNLSTALNLGWLGRIRDLSHVRIVAVIYRGAGVGHHRGNGP
Sbjct: 1   MAAKGKTESSWADYDENAKCNLSTALNLGWLGRIRDLSHVRIVAVIYRGAGVGHHRGNGP 60

Query: 61  VAVGEIHTGVMPLVGEAHLRLAHEVQILFKFRAVHLPEELGGLTGVRAVPAGQCLRRGRR 120
           VAVGEIHTGVMPLVGEAHLRLAHEVQILFKFRAVHLPEELGGLTGVRAVPAGQCLRRGRR
Sbjct: 61  VAVGEIHTGVMPLVGEAHLRLAHEVQILFKFRAVHLPEELGGLTGVRAVPAGQCLRRGRR 120

Query: 121 LSGARGVVLVLVLVLVLRLHLEAAPAARPGRAHRAVVHVKGAGWRQEARNRGTRGLWAES 180
           LSGARGVVLVLVLVLVLRLHLEAAPAARPGRAHRAVVHVKGAGWRQEARNRGTRGLWAES
Sbjct: 121 LSGARGVVLVLVLVLVLRLHLEAAPAARPGRAHRAVVHVKGAGWRQEARNRGTRGLWAES 180

Query: 181 GVHGTGGRLRGASVVRDLRVAVGAGRRAVPGHRGGEESRVGVHAVQRGRVGRGQRVAVER 240
           GVHGTGGRLRGASVVRDLRVAVGAGRRAVPGHRGGEESRVGVHAVQRGRVGRGQRVAVER
Sbjct: 181 GVHGTGGRLRGASVVRDLRVAVGAGRRAVPGHRGGEESRVGVHAVQRGRVGRGQRVAVER 240

Query: 241 RRAQTLAVAVVAAHVRRQQRRAGGEALLGELEAQAVHGHAAALGAQRGRLRLSQAVQEAA 300
           RRAQTLAVAVVAAHVRRQQRRAGGEALLGELEAQAVHGHAAALGAQRGRLRLSQAVQEAA
Sbjct: 241 RRAQTLAVAVVAAHVRRQQRRAGGEALLGELEAQAVHGHAAALGAQRGRLRLSQAVQEAA 300

Query: 301 LHPLQPLHLLAPPRPVLVVGVVLHVLHAQPLCLLHEGPLLRQRQRLPRLACTHLAQLGVV 360
           LHPLQPLHLLAPPRPVLVVGVVLHVLHAQPLCLLHEGPLLRQRQRLPRLACTHLAQLGVV
Sbjct: 301 LHPLQPLHLLAPPRPVLVVGVVLHVLHAQPLCLLHEGPLLRQRQRLPRLACTHLAQLGVV 360

Query: 361 QVWILLRQPLALVLSPHHESVHRPPDTGLALGSARGPGRCSAVRRRLALHLHVPDGAQRL 420
           QVWILLRQPLALVLSPHHESVHRPPDTGLALGSARGPGRCSAVRRRLALHLHVPDGAQRL
Sbjct: 361 QVWILLRQPLALVLSPHHESVHRPPDTGLALGSARGPGRCSAVRRRLALHLHVPDGAQRL 420

Query: 421 GPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQPSAGRAASPDPGEGVGN 480
           GPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQPSAGRAASPDPGEGVG+
Sbjct: 421 GPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQPSAGRAASPDPGEGVGS 480

Query: 481 EALRCPEGCAGLPARSRRPCSGLSRSGLQRTQGPQPA 517
           EALRCPEGCAGLPARSRRPCSGLSRSGLQRTQGPQPA
Sbjct: 481 EALRCPEGCAGLPARSRRPCSGLSRSGLQRTQGPQPA 517


>gi|239743560 PREDICTED: hypothetical protein XP_002342893 [Homo
           sapiens]
          Length = 517

 Score = 1032 bits (2668), Expect = 0.0
 Identities = 516/517 (99%), Positives = 517/517 (100%)

Query: 1   MAAKGKTESSWADYDENAKCNLSTALNLGWLGRIRDLSHVRIVAVIYRGAGVGHHRGNGP 60
           MAAKGKTESSWADYDENAKCNLSTALNLGWLGRIRDLSHVRIVAVIYRGAGVGHHRGNGP
Sbjct: 1   MAAKGKTESSWADYDENAKCNLSTALNLGWLGRIRDLSHVRIVAVIYRGAGVGHHRGNGP 60

Query: 61  VAVGEIHTGVMPLVGEAHLRLAHEVQILFKFRAVHLPEELGGLTGVRAVPAGQCLRRGRR 120
           VAVGEIHTGVMPLVGEAHLRLAHEVQILFKFRAVHLPEELGGLTGVRAVPAGQCLRRGRR
Sbjct: 61  VAVGEIHTGVMPLVGEAHLRLAHEVQILFKFRAVHLPEELGGLTGVRAVPAGQCLRRGRR 120

Query: 121 LSGARGVVLVLVLVLVLRLHLEAAPAARPGRAHRAVVHVKGAGWRQEARNRGTRGLWAES 180
           LSGARGVVLVLVLVLVLRLHLEAAPAARPGRAHRAVVHVKGAGWRQEARNRGTRGLWAES
Sbjct: 121 LSGARGVVLVLVLVLVLRLHLEAAPAARPGRAHRAVVHVKGAGWRQEARNRGTRGLWAES 180

Query: 181 GVHGTGGRLRGASVVRDLRVAVGAGRRAVPGHRGGEESRVGVHAVQRGRVGRGQRVAVER 240
           GVHGTGGRLRGASVVRDLRVAVGAGRRAVPGHRGGEESRVGVHAVQRGRVGRGQRVAVER
Sbjct: 181 GVHGTGGRLRGASVVRDLRVAVGAGRRAVPGHRGGEESRVGVHAVQRGRVGRGQRVAVER 240

Query: 241 RRAQTLAVAVVAAHVRRQQRRAGGEALLGELEAQAVHGHAAALGAQRGRLRLSQAVQEAA 300
           RRAQTLAVAVVAAHVRRQQRRAGGEALLGELEAQAVHGHAAALGAQRGRLRLSQAVQEAA
Sbjct: 241 RRAQTLAVAVVAAHVRRQQRRAGGEALLGELEAQAVHGHAAALGAQRGRLRLSQAVQEAA 300

Query: 301 LHPLQPLHLLAPPRPVLVVGVVLHVLHAQPLCLLHEGPLLRQRQRLPRLACTHLAQLGVV 360
           LHPLQPLHLLAPPRPVLVVGVVLHVLHAQPLCLLHEGPLLRQRQRLPRLACTHLAQLGVV
Sbjct: 301 LHPLQPLHLLAPPRPVLVVGVVLHVLHAQPLCLLHEGPLLRQRQRLPRLACTHLAQLGVV 360

Query: 361 QVWILLRQPLALVLSPHHESVHRPPDTGLALGSARGPGRCSAVRRRLALHLHVPDGAQRL 420
           QVWILLRQPLALVLSPHHESVHRPPDTGLALGSARGPGRCSAVRRRLALHLHVPDGAQRL
Sbjct: 361 QVWILLRQPLALVLSPHHESVHRPPDTGLALGSARGPGRCSAVRRRLALHLHVPDGAQRL 420

Query: 421 GPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQPSAGRAASPDPGEGVGN 480
           GPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQPSAGRAASPDPGEGVG+
Sbjct: 421 GPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQPSAGRAASPDPGEGVGS 480

Query: 481 EALRCPEGCAGLPARSRRPCSGLSRSGLQRTQGPQPA 517
           EALRCPEGCAGLPARSRRPCSGLSRSGLQRTQGPQPA
Sbjct: 481 EALRCPEGCAGLPARSRRPCSGLSRSGLQRTQGPQPA 517


>gi|169173078 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 402

 Score =  153 bits (387), Expect = 3e-37
 Identities = 139/348 (39%), Positives = 162/348 (46%), Gaps = 90/348 (25%)

Query: 196 RDLRVAVGAGRRAVPGHRGGEESRVGVHAVQRGRVGRGQRVAVERRRAQTLAVAV--VAA 253
           RDLR+A GAG+                     G  GRG+R    R +  T  V      A
Sbjct: 9   RDLRLAAGAGQAW-------------------GSAGRGRRGPAPRGQTGTQGVGSGGSGA 49

Query: 254 HVRRQ----QRRAGGEALLGELEAQAVHGHAAALGAQRGRLRLSQAVQEAALHPLQP--- 306
            VR +    QR AGG+AL GE +AQA  G+AAA G   G + +S  V +       P   
Sbjct: 50  GVRPEPCAGQRPAGGKALRGEGQAQAAQGYAAANGW--GTVLVSGLVPQDPRAAPPPGGR 107

Query: 307 -LHLLAPPRPVLVVGVVLHVLHAQPLCLLH-EGPLLRQRQRLP----------------- 347
            L LL PPR V             P C  + +   + Q  R P                 
Sbjct: 108 QLLLLRPPRWV-------------PSCFPNSQSADISQEDRKPAKRRPTHFYHPDEHKAQ 154

Query: 348 --------RLACTHLAQLGVVQVWI-----LLRQPLALVLSPHHESVHRPPDTGLALGSA 394
                   R      A  GV + W      + RQPLAL L P      + PD  LALGSA
Sbjct: 155 PSHVRGSRRPGSPRSASPGVGRSWASSWAGVPRQPLALDLRP----TWKAPDARLALGSA 210

Query: 395 RGPGRCSAVRRRLALHLHVPDGAQRLGPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHG 454
           RGPGR      RLALHL VP+GA++LGP  GAQP  HR QRA GLALVVTGVSRIR AHG
Sbjct: 211 RGPGR------RLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHG 264

Query: 455 APGLPRSPQPSAGRAASPDPGEGVGNEALRCPEGCAGLPARSRRPCSG 502
           APGLPR+P+PSAGR      G   G E LR      G P  +R P SG
Sbjct: 265 APGLPRAPKPSAGRGGK--EGGERGTEMLR---RLRGSPRPNRHPRSG 307


>gi|169172508 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 402

 Score =  153 bits (386), Expect = 4e-37
 Identities = 139/348 (39%), Positives = 162/348 (46%), Gaps = 90/348 (25%)

Query: 196 RDLRVAVGAGRRAVPGHRGGEESRVGVHAVQRGRVGRGQRVAVERRRAQTLAVAVVA--A 253
           RDLR+A GAG+                     G  GRG+R    R +  T  V      A
Sbjct: 9   RDLRLAAGAGQAW-------------------GSAGRGRRGPAPRGQTGTQGVGSGGGGA 49

Query: 254 HVRRQ----QRRAGGEALLGELEAQAVHGHAAALGAQRGRLRLSQAVQEAALHPLQP--- 306
            VR +    QR AGG+AL GE +AQA  G+AAA G   G + +S  V +       P   
Sbjct: 50  GVRPEPCAGQRPAGGKALRGEGQAQAAQGYAAANGW--GTVLVSGLVPQDPRAAPPPGGR 107

Query: 307 -LHLLAPPRPVLVVGVVLHVLHAQPLCLLH-EGPLLRQRQRLP----------------- 347
            L LL PPR V             P C  + +   + Q  R P                 
Sbjct: 108 QLLLLRPPRWV-------------PSCFPNSQSADISQEDRKPAKRRPTHFYHPDEHKAQ 154

Query: 348 --------RLACTHLAQLGVVQVWI-----LLRQPLALVLSPHHESVHRPPDTGLALGSA 394
                   R      A  GV + W      + RQPLAL L P      + PD  LALGSA
Sbjct: 155 PSHVRGSRRPGSPRSASPGVGRSWASSWAGVPRQPLALDLRP----TWKAPDARLALGSA 210

Query: 395 RGPGRCSAVRRRLALHLHVPDGAQRLGPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHG 454
           RGPGR      RLALHL VP+GA++LGP  GAQP  HR QRA GLALVVTGVSRIR AHG
Sbjct: 211 RGPGR------RLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHG 264

Query: 455 APGLPRSPQPSAGRAASPDPGEGVGNEALRCPEGCAGLPARSRRPCSG 502
           APGLPR+P+PSAGR      G   G E LR      G P  +R P SG
Sbjct: 265 APGLPRAPKPSAGRGGK--EGGERGTEMLR---RLRGSPRPNRHPRSG 307


>gi|169173306 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 281

 Score =  112 bits (281), Expect = 6e-25
 Identities = 63/99 (63%), Positives = 69/99 (69%), Gaps = 5/99 (5%)

Query: 404 RRRLALHLHVPDGAQRLGPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQ 463
           RRRLALHL VP+GA++LGP  GAQP  HR QRA GLALVVTGVSRIR AHGAPGLPR+P+
Sbjct: 93  RRRLALHLQVPEGARQLGPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAPK 152

Query: 464 PSAGRAASPDPGEGVGNEALRCPEGCAGLPARSRRPCSG 502
           PSAGR      G   G E LR      G P  +R P SG
Sbjct: 153 PSAGRGGK--EGGERGTEMLR---RLRGSPRPNRHPRSG 186


>gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 38/106 (35%), Positives = 43/106 (40%), Gaps = 4/106 (3%)

Query: 396 GPGRCSAVRRRLALHLHVPDGAQRLGPGAGAQPGHHRGQRALGLALVVTGVS---RIRAA 452
           G G  +++  R A   H  D     GPGAG Q     G  A              R RAA
Sbjct: 72  GQGFAASLLTRQAHPHHSSDARDAAGPGAG-QASPLEGSEAEEEEDAEDPRRPRLRERAA 130

Query: 453 HGAPGLPRSPQPSAGRAASPDPGEGVGNEALRCPEGCAGLPARSRR 498
              PGL RSP   AG  AS +P E  G   +R P G  G P   RR
Sbjct: 131 RLLPGLARSPDAPAGALASGEPCEDGGGGPVRSPPGSPGSPRPRRR 176


>gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 38/106 (35%), Positives = 43/106 (40%), Gaps = 4/106 (3%)

Query: 396 GPGRCSAVRRRLALHLHVPDGAQRLGPGAGAQPGHHRGQRALGLALVVTGVS---RIRAA 452
           G G  +++  R A   H  D     GPGAG Q     G  A              R RAA
Sbjct: 72  GQGFAASLLTRQAHPHHSSDARDAAGPGAG-QASPLEGSEAEEEEDAEDPRRPRLRERAA 130

Query: 453 HGAPGLPRSPQPSAGRAASPDPGEGVGNEALRCPEGCAGLPARSRR 498
              PGL RSP   AG  AS +P E  G   +R P G  G P   RR
Sbjct: 131 RLLPGLARSPDAPAGALASGEPCEDGGGGPVRSPPGSPGSPRPRRR 176


>gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]
          Length = 332

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 38/106 (35%), Positives = 43/106 (40%), Gaps = 4/106 (3%)

Query: 396 GPGRCSAVRRRLALHLHVPDGAQRLGPGAGAQPGHHRGQRALGLALVVTGVS---RIRAA 452
           G G  +++  R A   H  D     GPGAG Q     G  A              R RAA
Sbjct: 72  GQGFAASLLTRQAHPHHSSDARDAAGPGAG-QASPLEGSEAEEEEDAEDPRRPRLRERAA 130

Query: 453 HGAPGLPRSPQPSAGRAASPDPGEGVGNEALRCPEGCAGLPARSRR 498
              PGL RSP   AG  AS +P E  G   +R P G  G P   RR
Sbjct: 131 RLLPGLARSPDAPAGALASGEPCEDGGGGPVRSPPGSPGSPRPRRR 176


>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 123/452 (27%), Positives = 151/452 (33%), Gaps = 78/452 (17%)

Query: 40   VRIVAVIYRGAGVGHHRGNGPVAVGEIHTGVMPLVGEAHLRLAHEVQILFKFRAVHLPEE 99
            V +V  + RG G G          G  H GV    G   L   H            LP  
Sbjct: 690  VGVVGHLGRGRGAGRAEAARAAREGGPHQGVFIQRGRGGL--GHRP----------LPGW 737

Query: 100  LGGLTGVRAVPAGQCLRRGRRLSGARGVVLVLVLVLVLRLHLEAAPAA--------RPGR 151
             G   G  A P+ Q L R  R   A G   V    +   + +E   AA        R G 
Sbjct: 738  RGQGVGPLAQPSVQVLGRVPR-DPAVGAATVAQGPVHGHVPVELTAAAAVSGRGRLRDGL 796

Query: 152  AHRAVVHVKGA--GWRQ----EARNRGTRGLWAESGVHGTGGRLRGASVVRDLRVAVGAG 205
               A V  +GA   W      +    G  G  A  G    GG L GA V R  +  V AG
Sbjct: 797  GRVASVAAEGAQVAWAGAVLVQGHEAGVAG-GARGGGAAAGGPLAGAVVQRMRQRRVRAG 855

Query: 206  RRAVPGHRGGEESRVGVHA---VQRGRVGRGQRVAVERR---RAQTLAVAVVAAHVRRQQ 259
            RR V         R G  A    +R R G G   AV +R   R Q       AA   +  
Sbjct: 856  RRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGV 915

Query: 260  RRAGGEALLGELEAQAVHGHAAALGAQRGRLRLSQAVQEAALHPL-----------QPLH 308
            R A G A     +    H H      +R R R + A+   A HP            Q + 
Sbjct: 916  RAAQGRAHRPGAQGAPSHRHRPGARGRRSRRRAAVALAGGA-HPARAALGRRRGGGQAVG 974

Query: 309  LLAPPRPVLVVGVVLHVLHAQPLCLLHEGPLLRQRQRLP-RLACT------------HLA 355
              A  +  L  G V  V+ A        G     R R P RLA T            H  
Sbjct: 975  ARAAHQARLAGGQVDQVVVA-----ARAGDADGVRGRRPRRLALTARPELEELLERLHGL 1029

Query: 356  QLGVVQVWILLRQPLALVLSPH------HESVHRPPDTGLALGSARGPGRCSAVRRRLAL 409
            Q G+V V   LR    + L P         + H   +  + + +A         RR LA+
Sbjct: 1030 QDGLVDV---LRHHRVVRLHPQLAGACDGRAAHLDEEEAVRVAAAADVHELQRHRRLLAV 1086

Query: 410  HLHVPDGAQRLGPGAGAQPGHHRGQRALGLAL 441
             LH  DGA+R      AQ  H R   AL   L
Sbjct: 1087 ELHEADGARR-----QAQTVHPRQVLALAQTL 1113



 Score = 35.8 bits (81), Expect = 0.097
 Identities = 68/208 (32%), Positives = 78/208 (37%), Gaps = 39/208 (18%)

Query: 97  PEELGGLTGVRAVPAGQCLRRGRRLSGARGVVLVLVLVLVLRLHLEAAPAARPGRA---- 152
           P    G  G    P  Q L  G    GA G V+V            AAP AR GRA    
Sbjct: 612 PRRRHGGGGGGGGPGLQDLLGGGHAGGAHGHVVVAPAA--------AAPTAREGRAGRHG 663

Query: 153 HRAVVHVK-GAGWRQEARNRGTRGLWAESGVHGTGGRLRGASVVRDLRVAVGAGRRAVPG 211
           H AVV  +  AG    A    +  LW   GV G  GR RGA          G    A   
Sbjct: 664 HVAVVCPQVAAGAPVGADLDVSVVLWV--GVVGHLGRGRGA----------GRAEAARAA 711

Query: 212 HRGGEESRVGVHAVQRGRVGRGQRVAVERRRAQTLAVAVVAAHV--RRQQRRAGGEALLG 269
             GG    V    +QRGR G G R     R      +A  +  V  R  +  A G A + 
Sbjct: 712 REGGPHQGV---FIQRGRGGLGHRPLPGWRGQGVGPLAQPSVQVLGRVPRDPAVGAATVA 768

Query: 270 ELEAQAVHGH------AAALGAQRGRLR 291
           +     VHGH      AAA  + RGRLR
Sbjct: 769 Q---GPVHGHVPVELTAAAAVSGRGRLR 793


>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 123/452 (27%), Positives = 151/452 (33%), Gaps = 78/452 (17%)

Query: 40   VRIVAVIYRGAGVGHHRGNGPVAVGEIHTGVMPLVGEAHLRLAHEVQILFKFRAVHLPEE 99
            V +V  + RG G G          G  H GV    G   L   H            LP  
Sbjct: 690  VGVVGHLGRGRGAGRAEAARAAREGGPHQGVFIQRGRGGL--GHRP----------LPGW 737

Query: 100  LGGLTGVRAVPAGQCLRRGRRLSGARGVVLVLVLVLVLRLHLEAAPAA--------RPGR 151
             G   G  A P+ Q L R  R   A G   V    +   + +E   AA        R G 
Sbjct: 738  RGQGVGPLAQPSVQVLGRVPR-DPAVGAATVAQGPVHGHVPVELTAAAAVSGRGRLRDGL 796

Query: 152  AHRAVVHVKGA--GWRQ----EARNRGTRGLWAESGVHGTGGRLRGASVVRDLRVAVGAG 205
               A V  +GA   W      +    G  G  A  G    GG L GA V R  +  V AG
Sbjct: 797  GRVASVAAEGAQVAWAGAVLVQGHEAGVAG-GARGGGAAAGGPLAGAVVQRMRQRRVRAG 855

Query: 206  RRAVPGHRGGEESRVGVHA---VQRGRVGRGQRVAVERR---RAQTLAVAVVAAHVRRQQ 259
            RR V         R G  A    +R R G G   AV +R   R Q       AA   +  
Sbjct: 856  RRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGV 915

Query: 260  RRAGGEALLGELEAQAVHGHAAALGAQRGRLRLSQAVQEAALHPL-----------QPLH 308
            R A G A     +    H H      +R R R + A+   A HP            Q + 
Sbjct: 916  RAAQGRAHRPGAQGAPSHRHRPGARGRRSRRRAAVALAGGA-HPARAALGRRRGGGQAVG 974

Query: 309  LLAPPRPVLVVGVVLHVLHAQPLCLLHEGPLLRQRQRLP-RLACT------------HLA 355
              A  +  L  G V  V+ A        G     R R P RLA T            H  
Sbjct: 975  ARAAHQARLAGGQVDQVVVA-----ARAGDADGVRGRRPRRLALTARPELEELLERLHGL 1029

Query: 356  QLGVVQVWILLRQPLALVLSPH------HESVHRPPDTGLALGSARGPGRCSAVRRRLAL 409
            Q G+V V   LR    + L P         + H   +  + + +A         RR LA+
Sbjct: 1030 QDGLVDV---LRHHRVVRLHPQLAGACDGRAAHLDEEEAVRVAAAADVHELQRHRRLLAV 1086

Query: 410  HLHVPDGAQRLGPGAGAQPGHHRGQRALGLAL 441
             LH  DGA+R      AQ  H R   AL   L
Sbjct: 1087 ELHEADGARR-----QAQTVHPRQVLALAQTL 1113



 Score = 35.8 bits (81), Expect = 0.097
 Identities = 68/208 (32%), Positives = 78/208 (37%), Gaps = 39/208 (18%)

Query: 97  PEELGGLTGVRAVPAGQCLRRGRRLSGARGVVLVLVLVLVLRLHLEAAPAARPGRA---- 152
           P    G  G    P  Q L  G    GA G V+V            AAP AR GRA    
Sbjct: 612 PRRRHGGGGGGGGPGLQDLLGGGHAGGAHGHVVVAPAA--------AAPTAREGRAGRHG 663

Query: 153 HRAVVHVK-GAGWRQEARNRGTRGLWAESGVHGTGGRLRGASVVRDLRVAVGAGRRAVPG 211
           H AVV  +  AG    A    +  LW   GV G  GR RGA          G    A   
Sbjct: 664 HVAVVCPQVAAGAPVGADLDVSVVLWV--GVVGHLGRGRGA----------GRAEAARAA 711

Query: 212 HRGGEESRVGVHAVQRGRVGRGQRVAVERRRAQTLAVAVVAAHV--RRQQRRAGGEALLG 269
             GG    V    +QRGR G G R     R      +A  +  V  R  +  A G A + 
Sbjct: 712 REGGPHQGV---FIQRGRGGLGHRPLPGWRGQGVGPLAQPSVQVLGRVPRDPAVGAATVA 768

Query: 270 ELEAQAVHGH------AAALGAQRGRLR 291
           +     VHGH      AAA  + RGRLR
Sbjct: 769 Q---GPVHGHVPVELTAAAAVSGRGRLR 793


>gi|226437602 NK1 homeobox 2 [Homo sapiens]
          Length = 310

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 24/51 (47%), Positives = 26/51 (50%)

Query: 448 RIRAAHGAPGLPRSPQPSAGRAASPDPGEGVGNEALRCPEGCAGLPARSRR 498
           R RAA   PGL RSP   AG  AS +P E  G   +R P G  G P   RR
Sbjct: 104 RERAARLLPGLARSPDAPAGALASGEPCEDGGGGPVRSPPGSPGSPRPRRR 154


>gi|239751791 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 650

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 74/280 (26%), Positives = 94/280 (33%), Gaps = 66/280 (23%)

Query: 152 AHRAVVHVKGAGWRQE----ARNRGTRGLWAESGVH-GTGGRLRGASVV----------- 195
           AH AV  V  + WR      + +R TRGL    GV  G GG   G               
Sbjct: 117 AHAAVTWVGVSDWRGSFLKLSSSRSTRGLVLGEGVGVGAGGEGGGEGAAGAASSLSERSS 176

Query: 196 -----------RDLRVAVGAGRRAVPGHRGGEESRVGVHAVQRGRVGRGQRVAVERRRAQ 244
                       D RVA GA  R  P        R G    +  R  RG++    +RR  
Sbjct: 177 ERVELQSDTDDSDTRVAEGARPRPGPTSSRRPWGRAGGLRPRGKRPARGKKRPSSQRRCS 236

Query: 245 TLAVAVVAA----------------HVRRQQRRAGGEALLGELEAQAVHGHAA----ALG 284
           + + A  +A                  R Q+RRA      G  +    HG  A    + G
Sbjct: 237 SPSAARASATSAPRPTAPSSVAQPSSARSQRRRAPCPHRAGGADGVGSHGARAPGEGSAG 296

Query: 285 AQRGRLRLSQAVQEAALHPLQPLHLLAPPRPVLVVGVVLHVLHAQPLCLLHEGPLLRQRQ 344
           +   R+ L   V+   L P        PPR        LHV    PL L    PLL   Q
Sbjct: 297 SGTERVELGPHVRPFFLPPTSSSFFGGPPR--------LHV-PLPPLLL----PLLLPPQ 343

Query: 345 RLPRLACTHLAQLGVVQVWILLRQPLALVLSPHHESVHRP 384
                  T L Q   ++V + L  P  L+    HE V  P
Sbjct: 344 ------STGLEQAAALEVALALADPGLLLAQLAHEQVQLP 377


>gi|239746684 PREDICTED: hypothetical protein XP_002343812 [Homo
           sapiens]
          Length = 396

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 48/153 (31%), Positives = 63/153 (41%), Gaps = 5/153 (3%)

Query: 133 LVLVLRLHLEAAPAARPGRAHRAVVHVKGAGWRQEARNRGTRGLWAESGVHGTGGRLRGA 192
           LV+ L +H+E     RPG A      ++    R+ A        +   G  G  G     
Sbjct: 239 LVVKLDVHVEGLLGVRPGLAMALADPLEVGPERRHAGGGSPVVPFPRRGCPGPAGGPGPG 298

Query: 193 SVVRDLRVAVGAGRRAVPGHRGGEESRVGVHAVQRGRVGRGQRVAVERRRAQTLAVAVVA 252
              R L  AVG G   + G R G      + A +RGR G G  V   RR  +  ++ V+A
Sbjct: 299 LTRRTL--AVGPGLGLLGGRRVGSVGGRWLRA-RRGRSGLGGAVGGLRRAPEAPSLPVIA 355

Query: 253 AHVRRQQRRA--GGEALLGELEAQAVHGHAAAL 283
                QQR      EALL  L  QA +G  AAL
Sbjct: 356 LLFLGQQRLQVDHAEALLVHLLLQAPNGGLAAL 388


>gi|239746282 PREDICTED: hypothetical protein XP_002343723 [Homo
           sapiens]
          Length = 725

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 74/280 (26%), Positives = 94/280 (33%), Gaps = 66/280 (23%)

Query: 152 AHRAVVHVKGAGWRQE----ARNRGTRGLWAESGVH-GTGGRLRGASVV----------- 195
           AH AV  V  + WR      + +R TRGL    GV  G GG   G               
Sbjct: 117 AHAAVTWVGVSDWRGSFLKLSSSRSTRGLVLGEGVGVGAGGEGGGEGAAGAASSLSERSS 176

Query: 196 -----------RDLRVAVGAGRRAVPGHRGGEESRVGVHAVQRGRVGRGQRVAVERRRAQ 244
                       D RVA GA  R  P        R G    +  R  RG++    +RR  
Sbjct: 177 ERVELQSDTDDSDTRVAEGARPRPGPTSSRRPWGRAGGLRPRGKRPARGKKRPSSQRRCS 236

Query: 245 TLAVAVVAA----------------HVRRQQRRAGGEALLGELEAQAVHGHAA----ALG 284
           + + A  +A                  R Q+RRA      G  +    HG  A    + G
Sbjct: 237 SPSAARASATSAPRPTAPSSVAQPSSARSQRRRAPCPHRAGGADGVGSHGARAPGEGSAG 296

Query: 285 AQRGRLRLSQAVQEAALHPLQPLHLLAPPRPVLVVGVVLHVLHAQPLCLLHEGPLLRQRQ 344
           +   R+ L   V+   L P        PPR        LHV    PL L    PLL   Q
Sbjct: 297 SGTERVELGPHVRPFFLPPTSSSFFGGPPR--------LHV-PLPPLLL----PLLLPPQ 343

Query: 345 RLPRLACTHLAQLGVVQVWILLRQPLALVLSPHHESVHRP 384
                  T L Q   ++V + L  P  L+    HE V  P
Sbjct: 344 ------STGLEQAAALEVALALADPGLLLAQLAHEQVQLP 377


>gi|208431817 protein kinase-like protein SgK493 [Homo sapiens]
          Length = 493

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 43/132 (32%), Positives = 56/132 (42%), Gaps = 16/132 (12%)

Query: 365 LLRQPLALVLSPHHESVH--RPPDTGLALGSARGPGRCSAVRRRLALHLHVPDGAQRLGP 422
           LL   L ++ +P  E     + P+   A G  R  GR    R+  A +  V     R GP
Sbjct: 17  LLGSVLNVLFAPGSEPPRPGQSPEPSPAPGPGRRGGRGELARQIRARYEEV-QRYSRGGP 75

Query: 423 GAGAQPGHHRGQRALGLALVVTGVSRIRA------AHGAPGLPRSPQPSAGRAASPDPGE 476
           G GA  G    +R + LA    G+ R R       + GAPG P +P P      SP PG 
Sbjct: 76  GPGA--GRPERRRLMDLAPGGPGLPRPRPPWARPLSDGAPGWPPAPGPG-----SPGPGP 128

Query: 477 GVGNEALRCPEG 488
            +G  ALR   G
Sbjct: 129 RLGCAALRNVSG 140


>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
           sapiens]
          Length = 355

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 8/72 (11%)

Query: 445 GVSRIRAAHGAPGLPRSPQPSAGRAASPDPGEGVGNEALRCPEGCAGLPARSRRPCSGLS 504
           G+++  +AH +  +PR   PS  R AS   G G G E+    +G  G  AR+R      +
Sbjct: 136 GLTKYNSAHSSSRVPRPRLPSQRRGAS--CGLGPGPESRAARQGLGGRSARAR------T 187

Query: 505 RSGLQRTQGPQP 516
           R G  RT+ P+P
Sbjct: 188 RRGPHRTRRPEP 199


>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
           sapiens]
          Length = 355

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 8/72 (11%)

Query: 445 GVSRIRAAHGAPGLPRSPQPSAGRAASPDPGEGVGNEALRCPEGCAGLPARSRRPCSGLS 504
           G+++  +AH +  +PR   PS  R AS   G G G E+    +G  G  AR+R      +
Sbjct: 136 GLTKYNSAHSSSRVPRPRLPSQRRGAS--CGLGPGPESRAARQGLGGRSARAR------T 187

Query: 505 RSGLQRTQGPQP 516
           R G  RT+ P+P
Sbjct: 188 RRGPHRTRRPEP 199


>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
           sapiens]
          Length = 355

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 8/72 (11%)

Query: 445 GVSRIRAAHGAPGLPRSPQPSAGRAASPDPGEGVGNEALRCPEGCAGLPARSRRPCSGLS 504
           G+++  +AH +  +PR   PS  R AS   G G G E+    +G  G  AR+R      +
Sbjct: 136 GLTKYNSAHSSSRVPRPRLPSQRRGAS--CGLGPGPESRAARQGLGGRSARAR------T 187

Query: 505 RSGLQRTQGPQP 516
           R G  RT+ P+P
Sbjct: 188 RRGPHRTRRPEP 199


>gi|19263349 Cbp/p300-interacting transactivator, with Glu/Asp-rich
           carboxy-terminal domain, 4 [Homo sapiens]
          Length = 184

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 39/127 (30%), Positives = 48/127 (37%), Gaps = 20/127 (15%)

Query: 372 LVLSPHHESVHRPPDTGLALGSAR--------GPGRCSAVRRRLALHLHVPDGAQ----- 418
           L+L+  +  V RPP    A G           GPG  S +R R A  L  P   Q     
Sbjct: 5   LMLAEGYRLVQRPPSAAAAHGPHALRTLPPYAGPGLDSGLRPRGA-PLGPPPPRQPGALA 63

Query: 419 --RLGPGAGAQPGHHRGQRALGLA----LVVTGVSRIRAAHGAPGLPRSPQPSAGRAASP 472
               GP +  QP       A G+A    +      R  A   APG P  PQP+   AA P
Sbjct: 64  YGAFGPPSSFQPFPAVPPPAAGIAHLQPVATPYPGRAAAPPNAPGGPPGPQPAPSAAAPP 123

Query: 473 DPGEGVG 479
            P   +G
Sbjct: 124 PPAHALG 130


>gi|24308458 Lix1 homolog (mouse) like [Homo sapiens]
          Length = 337

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 35/98 (35%), Positives = 41/98 (41%), Gaps = 10/98 (10%)

Query: 417 AQRLGPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQPSAGRAASPDPGE 476
           AQRL PG G      RG     L  +  GV+   AA   P  P  P P+    A P P  
Sbjct: 6   AQRLQPGVGTSG---RGT----LRALRPGVTGAAAATATP--PAGPPPAPPPPAPPPPPL 56

Query: 477 GV-GNEALRCPEGCAGLPARSRRPCSGLSRSGLQRTQG 513
            + G   L  P G AG PA  R     + RS  + TQG
Sbjct: 57  LLSGAPGLPLPPGAAGSPAVLREAVEAVVRSFAKHTQG 94


>gi|239749631 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 217

 Score = 36.2 bits (82), Expect = 0.074
 Identities = 32/85 (37%), Positives = 38/85 (44%), Gaps = 12/85 (14%)

Query: 391 LGSARGPGRCSAVRRRLALHLHVPDGAQRLGPGAGAQPGHHRGQR---ALGLALVVTGVS 447
           LG AR   RCSA R RL        GA RL  G GA+ G  R         L+ +  G +
Sbjct: 108 LGPAR---RCSARRPRLH-----QGGAGRLAAG-GAEAGERRSPNRGATSSLSPIARGAA 158

Query: 448 RIRAAHGAPGLPRSPQPSAGRAASP 472
            +R      GLPR P P+A R   P
Sbjct: 159 DVRPFSWVGGLPRPPAPAALRLLLP 183


>gi|239743906 PREDICTED: hypothetical protein XP_002342988 [Homo
           sapiens]
          Length = 217

 Score = 36.2 bits (82), Expect = 0.074
 Identities = 32/85 (37%), Positives = 38/85 (44%), Gaps = 12/85 (14%)

Query: 391 LGSARGPGRCSAVRRRLALHLHVPDGAQRLGPGAGAQPGHHRGQR---ALGLALVVTGVS 447
           LG AR   RCSA R RL        GA RL  G GA+ G  R         L+ +  G +
Sbjct: 108 LGPAR---RCSARRPRLH-----QGGAGRLAAG-GAEAGERRSPNRGATSSLSPIARGAA 158

Query: 448 RIRAAHGAPGLPRSPQPSAGRAASP 472
            +R      GLPR P P+A R   P
Sbjct: 159 DVRPFSWVGGLPRPPAPAALRLLLP 183


>gi|239046743 Nedd4 family interacting protein 2 isoform 2 [Homo
           sapiens]
          Length = 316

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 8/91 (8%)

Query: 391 LGSARGPG---RCSAVRRRLALHLHVPDGAQRLGPG-AGAQPGHHRGQRALGLALVVTGV 446
           L SARG     R +A    ++       G++ L PG  G + G  RG  A   +   TGV
Sbjct: 17  LNSARGAPELLRGTATNAEVSAAAAGATGSEELPPGDRGCRNGGGRGPAATTSS---TGV 73

Query: 447 SRIRAAHGAPGLPRSPQPSAGRAASPDPGEG 477
           + + A HG   L R P P  GR     PG G
Sbjct: 74  A-VGAEHGEDSLSRKPDPEPGRMDHHQPGTG 103


>gi|239046738 Nedd4 family interacting protein 2 isoform 1 [Homo
           sapiens]
          Length = 336

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 8/91 (8%)

Query: 391 LGSARGPG---RCSAVRRRLALHLHVPDGAQRLGPG-AGAQPGHHRGQRALGLALVVTGV 446
           L SARG     R +A    ++       G++ L PG  G + G  RG  A   +   TGV
Sbjct: 17  LNSARGAPELLRGTATNAEVSAAAAGATGSEELPPGDRGCRNGGGRGPAATTSS---TGV 73

Query: 447 SRIRAAHGAPGLPRSPQPSAGRAASPDPGEG 477
           + + A HG   L R P P  GR     PG G
Sbjct: 74  A-VGAEHGEDSLSRKPDPEPGRMDHHQPGTG 103


>gi|40806216 visual system homeobox 1 isoform b [Homo sapiens]
          Length = 239

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 12/99 (12%)

Query: 429 GHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQPSAGRAASPDPGEGVGNEAL---RC 485
           G  RG R  G A  +T +  + A   AP  P       G A +P PG G+   +L     
Sbjct: 21  GSPRGSRPRGFA--ITDLLGLEAELPAPAGPGQGSGCEGPAVAPCPGPGLDGSSLARGAL 78

Query: 486 PEGCAGL-------PARSRRPCSGLSRSGLQRTQGPQPA 517
           P G   L       PA +R PC  L+       +GP+PA
Sbjct: 79  PLGLGLLCGFGTQPPAAARAPCLLLADVPFLPPRGPEPA 117


>gi|11056038 visual system homeobox 1 isoform a [Homo sapiens]
          Length = 365

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 12/99 (12%)

Query: 429 GHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQPSAGRAASPDPGEGVGNEAL---RC 485
           G  RG R  G A  +T +  + A   AP  P       G A +P PG G+   +L     
Sbjct: 21  GSPRGSRPRGFA--ITDLLGLEAELPAPAGPGQGSGCEGPAVAPCPGPGLDGSSLARGAL 78

Query: 486 PEGCAGL-------PARSRRPCSGLSRSGLQRTQGPQPA 517
           P G   L       PA +R PC  L+       +GP+PA
Sbjct: 79  PLGLGLLCGFGTQPPAAARAPCLLLADVPFLPPRGPEPA 117


>gi|89142737 alpha 3 type IV collagen isoform 5 precursor [Homo
            sapiens]
          Length = 1424

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 38/118 (32%), Positives = 45/118 (38%), Gaps = 17/118 (14%)

Query: 414  PDGAQRL--GPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQP-----SA 466
            P+GA      PG   +PG H      G+  ++ G   IR   G PG P SP P       
Sbjct: 1099 PEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLL-GPPGIRGPPGLPGFPGSPGPMGIRGDQ 1157

Query: 467  GRAASPDP-GEGVGNEALRCPEGCAGLP----ARSRRPCSGL----SRSGLQRTQGPQ 515
            GR   P P GE      LR P G  G P    A+  R   G      R G     GP+
Sbjct: 1158 GRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPR 1215


>gi|89142735 alpha 3 type IV collagen isoform 4 precursor [Homo
            sapiens]
          Length = 1494

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 38/118 (32%), Positives = 45/118 (38%), Gaps = 17/118 (14%)

Query: 414  PDGAQRL--GPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQP-----SA 466
            P+GA      PG   +PG H      G+  ++ G   IR   G PG P SP P       
Sbjct: 1099 PEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLL-GPPGIRGPPGLPGFPGSPGPMGIRGDQ 1157

Query: 467  GRAASPDP-GEGVGNEALRCPEGCAGLP----ARSRRPCSGL----SRSGLQRTQGPQ 515
            GR   P P GE      LR P G  G P    A+  R   G      R G     GP+
Sbjct: 1158 GRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPR 1215


>gi|89142733 alpha 3 type IV collagen isoform 2 precursor [Homo
            sapiens]
          Length = 1637

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 38/118 (32%), Positives = 45/118 (38%), Gaps = 17/118 (14%)

Query: 414  PDGAQRL--GPGAGAQPGHHRGQRALGLALVVTGVSRIRAAHGAPGLPRSPQP-----SA 466
            P+GA      PG   +PG H      G+  ++ G   IR   G PG P SP P       
Sbjct: 1099 PEGAPGSPGSPGLPGKPGPHGDLGFKGIKGLL-GPPGIRGPPGLPGFPGSPGPMGIRGDQ 1157

Query: 467  GRAASPDP-GEGVGNEALRCPEGCAGLP----ARSRRPCSGL----SRSGLQRTQGPQ 515
            GR   P P GE      LR P G  G P    A+  R   G      R G     GP+
Sbjct: 1158 GRDGIPGPAGEKGETGLLRAPPGPRGNPGAQGAKGDRGAPGFPGLPGRKGAMGDAGPR 1215


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,019,165
Number of Sequences: 37866
Number of extensions: 1267622
Number of successful extensions: 5558
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 218
Number of HSP's that attempted gapping in prelim test: 5117
Number of HSP's gapped (non-prelim): 668
length of query: 517
length of database: 18,247,518
effective HSP length: 107
effective length of query: 410
effective length of database: 14,195,856
effective search space: 5820300960
effective search space used: 5820300960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.