Guide to the Human Genome
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Name: NDFIP2 Sequence: fasta or formatted (316aa) NCBI GI: 239046743
Description:

Nedd4 family interacting protein 2 isoform 2

Referenced in:

Ubiquitin and Related Protein Modifications

Other entries for this name:
alt prot [336aa] Nedd4 family interacting protein 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.0         38           5
 C cysteine            1.3          4           1
 D aspartate           4.4         14           2
 E glutamate           7.0         22           3
 F phenylalanine       4.7         15           2
 G glycine             8.9         28           3
 H histidine           1.3          4           2
 I isoleucine          3.2         10           1
 K lysine              1.6          5           1
 L leucine             7.3         23           3
 M methionine          2.2          7           1
 N asparagine          3.2         10           1
 P proline             7.9         25           3
 Q glutamine           3.2         10           1
 R arginine            6.6         21           3
 S serine              9.2         29           2
 T threonine           6.0         19           2
 V valine              5.1         16           1
 W tryptophan          1.3          4           2
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Nedd4 family interacting protein 2 isoform 2 
NDFIP2                0.979   Nedd4 family interacting protein 2 isoform 1 
NDFIP1                0.285   Nedd4 family interacting protein 1 
FSCB                  0.032   fibrous sheath CABYR binding protein 
CNOT3                 0.031   CCR4-NOT transcription complex, subunit 3 
GAP43                 0.028   growth associated protein 43 isoform 1 
GAP43                 0.028   growth associated protein 43 isoform 2 
ZC3H6                 0.026   zinc finger CCCH-type domain containing 6 
LOC100290274          0.024   PREDICTED: hypothetical protein XP_002346984 
LOC100288645          0.024   PREDICTED: hypothetical protein XP_002342846 
TCERG1                0.023   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.023   transcription elongation regulator 1 isoform 1 [Homo...
CLIC6                 0.023   chloride intracellular channel 6 
MUC7                  0.021   mucin 7, secreted precursor 
MUC7                  0.021   mucin 7, secreted precursor 
MUC7                  0.021   mucin 7, secreted precursor 
TSC22D2               0.021   TSC22 domain family, member 2 
MUC21                 0.021   mucin 21 
PRR12                 0.021   proline rich 12 
CPEB3                 0.021   cytoplasmic polyadenylation element binding protein ...
MUC2                  0.019   mucin 2 precursor 
APC2                  0.019   adenomatosis polyposis coli 2 
PRRT2                 0.019   proline-rich transmembrane protein 2 
AGAP2                 0.019   centaurin, gamma 1 isoform PIKE-L 
MLL2                  0.019   myeloid/lymphoid or mixed-lineage leukemia 2 
TRIO                  0.019   triple functional domain (PTPRF interacting) 
MAP7                  0.019   microtubule-associated protein 7 
TTMA                  0.019   hypothetical protein LOC645369 
TNRC18                0.018   trinucleotide repeat containing 18 
MAP3K1                0.018   mitogen-activated protein kinase kinase kinase 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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