Search of human proteins with 239754626

Search of human proteins with 239754626

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754626 PREDICTED: hypothetical protein [Homo sapiens]
         (103 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754626 PREDICTED: hypothetical protein [Homo sapiens]           215   7e-57
gi|239754666 PREDICTED: hypothetical protein [Homo sapiens]           147   2e-36
gi|239749222 PREDICTED: hypothetical protein XP_002346959 [Homo ...   147   2e-36
gi|239743299 PREDICTED: hypothetical protein XP_002342819 [Homo ...   147   2e-36
gi|239508982 PREDICTED: hypothetical protein [Homo sapiens]           147   2e-36
gi|239752799 PREDICTED: hypothetical protein [Homo sapiens]           124   2e-29
gi|239743252 PREDICTED: hypothetical protein [Homo sapiens]           124   2e-29
gi|239508927 PREDICTED: hypothetical protein [Homo sapiens]           124   2e-29
gi|169169009 PREDICTED: hypothetical protein [Homo sapiens]            35   0.013
gi|45505137 podocan [Homo sapiens]                                     33   0.037
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]            33   0.048
gi|239752904 PREDICTED: hypothetical protein [Homo sapiens]            32   0.082
gi|239747453 PREDICTED: hypothetical protein XP_002347537 [Homo ...    32   0.082
gi|239741327 PREDICTED: hypothetical protein XP_002342174 [Homo ...    32   0.082
gi|46409434 hypothetical protein LOC388759 [Homo sapiens]              32   0.082
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]            32   0.14 
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]            32   0.14 
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]            31   0.18 
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ...    31   0.18 
gi|32698704 tectonin beta-propeller repeat containing 1 [Homo sa...    31   0.18 
gi|239746493 PREDICTED: hypothetical protein XP_002343745 [Homo ...    31   0.24 
gi|194353964 coiled-coil domain containing 157 [Homo sapiens]          30   0.31 
gi|239757300 PREDICTED: hypothetical protein [Homo sapiens]            30   0.41 
gi|239751805 PREDICTED: hypothetical protein XP_002348006 [Homo ...    30   0.41 
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]            30   0.41 
gi|239746296 PREDICTED: hypothetical protein XP_002343726 [Homo ...    30   0.41 
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ...    30   0.41 
gi|193082993 GTP binding protein 3 (mitochondrial) isoform III [...    30   0.41 
gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Ho...    30   0.41 
gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV [H...    30   0.41 

>gi|239754626 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score =  215 bits (547), Expect = 7e-57
 Identities = 103/103 (100%), Positives = 103/103 (100%)

Query: 1   MGNLVLTQRTWAPGPSNAALDLTLKGSKDKASGAGARGAGREVVAEAKGRRDLGLARVCP 60
           MGNLVLTQRTWAPGPSNAALDLTLKGSKDKASGAGARGAGREVVAEAKGRRDLGLARVCP
Sbjct: 1   MGNLVLTQRTWAPGPSNAALDLTLKGSKDKASGAGARGAGREVVAEAKGRRDLGLARVCP 60

Query: 61  RRPGAGRRCTVSPREADLGPEKDTRLDLPRRPGPGPSGAEQPW 103
           RRPGAGRRCTVSPREADLGPEKDTRLDLPRRPGPGPSGAEQPW
Sbjct: 61  RRPGAGRRCTVSPREADLGPEKDTRLDLPRRPGPGPSGAEQPW 103


>gi|239754666 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 122

 Score =  147 bits (371), Expect = 2e-36
 Identities = 70/73 (95%), Positives = 70/73 (95%)

Query: 31  ASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKDTRLDLPR 90
           A GAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKD RLDLPR
Sbjct: 50  AGGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKDPRLDLPR 109

Query: 91  RPGPGPSGAEQPW 103
           RPGPGPSGAEQ W
Sbjct: 110 RPGPGPSGAEQLW 122


>gi|239749222 PREDICTED: hypothetical protein XP_002346959 [Homo
           sapiens]
          Length = 122

 Score =  147 bits (371), Expect = 2e-36
 Identities = 70/73 (95%), Positives = 70/73 (95%)

Query: 31  ASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKDTRLDLPR 90
           A GAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKD RLDLPR
Sbjct: 50  AGGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKDPRLDLPR 109

Query: 91  RPGPGPSGAEQPW 103
           RPGPGPSGAEQ W
Sbjct: 110 RPGPGPSGAEQLW 122


>gi|239743299 PREDICTED: hypothetical protein XP_002342819 [Homo
           sapiens]
          Length = 122

 Score =  147 bits (371), Expect = 2e-36
 Identities = 70/73 (95%), Positives = 70/73 (95%)

Query: 31  ASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKDTRLDLPR 90
           A GAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKD RLDLPR
Sbjct: 50  AGGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKDPRLDLPR 109

Query: 91  RPGPGPSGAEQPW 103
           RPGPGPSGAEQ W
Sbjct: 110 RPGPGPSGAEQLW 122


>gi|239508982 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 122

 Score =  147 bits (371), Expect = 2e-36
 Identities = 70/73 (95%), Positives = 70/73 (95%)

Query: 31  ASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKDTRLDLPR 90
           A GAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKD RLDLPR
Sbjct: 50  AGGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKDPRLDLPR 109

Query: 91  RPGPGPSGAEQPW 103
           RPGPGPSGAEQ W
Sbjct: 110 RPGPGPSGAEQLW 122


>gi|239752799 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 60

 Score =  124 bits (311), Expect = 2e-29
 Identities = 56/60 (93%), Positives = 58/60 (96%)

Query: 44  VAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKDTRLDLPRRPGPGPSGAEQPW 103
           +AEAKGRRDLGLARVCP+RPGAGRRCTVSPREADLGPEKDT LDLP RPGPGPSGAEQPW
Sbjct: 1   MAEAKGRRDLGLARVCPQRPGAGRRCTVSPREADLGPEKDTHLDLPHRPGPGPSGAEQPW 60


>gi|239743252 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 60

 Score =  124 bits (311), Expect = 2e-29
 Identities = 56/60 (93%), Positives = 58/60 (96%)

Query: 44  VAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKDTRLDLPRRPGPGPSGAEQPW 103
           +AEAKGRRDLGLARVCP+RPGAGRRCTVSPREADLGPEKDT LDLP RPGPGPSGAEQPW
Sbjct: 1   MAEAKGRRDLGLARVCPQRPGAGRRCTVSPREADLGPEKDTHLDLPHRPGPGPSGAEQPW 60


>gi|239508927 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 60

 Score =  124 bits (311), Expect = 2e-29
 Identities = 56/60 (93%), Positives = 58/60 (96%)

Query: 44  VAEAKGRRDLGLARVCPRRPGAGRRCTVSPREADLGPEKDTRLDLPRRPGPGPSGAEQPW 103
           +AEAKGRRDLGLARVCP+RPGAGRRCTVSPREADLGPEKDT LDLP RPGPGPSGAEQPW
Sbjct: 1   MAEAKGRRDLGLARVCPQRPGAGRRCTVSPREADLGPEKDTHLDLPHRPGPGPSGAEQPW 60


>gi|169169009 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 230

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 11/96 (11%)

Query: 7   TQRTWAPGPSNAALDLTLKGSKDKASGAGARGAGREVVAEAKGRRDLGLARVCPRRPG-- 64
           TQR W P P +AA   TL+    + +      A R ++ +A+G +    A   PR PG  
Sbjct: 99  TQRPWEPTPGSAAPANTLEKQNRQPAELLPPQAPRGMLKKAEGEKCGSPAERAPRGPGPK 158

Query: 65  -----AGRRCTVSPREADLGPEKDTR----LDLPRR 91
                AGR  +  PR   L   + T+    LDL R+
Sbjct: 159 TGSARAGRTYSEDPRAPALPQPETTKMQISLDLDRK 194


>gi|45505137 podocan [Homo sapiens]
          Length = 661

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 3/80 (3%)

Query: 26  GSKDKASGAGARGAGREVVAEAKGRRDLGLARVCP-RRPGAGRRC--TVSPREADLGPEK 82
           G+ D A  AG     R ++        L L  V   R PG GR    ++SP E +   E+
Sbjct: 38  GASDSAPPAGTMAQSRVLLLLLLLPPQLHLGPVLAVRAPGFGRSGGHSLSPEENEFAEEE 97

Query: 83  DTRLDLPRRPGPGPSGAEQP 102
              +  P  PGPGP+    P
Sbjct: 98  PVLVLSPEEPGPGPAAVSCP 117


>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 426

 Score = 33.1 bits (74), Expect = 0.048
 Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 8/102 (7%)

Query: 1   MGNLVLTQRTWAPGPSNAALDLTLKGSKDKASGAGAR----GAGREVVAEAKGR--RDLG 54
           +G + LT R  +PGP+  A     +GS  +  G   R     AG+   A A+    R   
Sbjct: 85  LGRVPLTFREASPGPAPGAP--RARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRS 142

Query: 55  LARVCPRRPGAGRRCTVSPREADLGPEKDTRLDLPRRPGPGP 96
           LAR  PR  G+  R +V P        +  R    RRP P P
Sbjct: 143 LARCLPRSVGSCVRPSVGPSLPRRHCRRHCRCHCRRRPLPKP 184


>gi|239752904 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 282

 Score = 32.3 bits (72), Expect = 0.082
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 14/100 (14%)

Query: 9   RTWAPGPSNAALDLTLKGSKDKASGAGARG------AGREVVAEAKGRRDLGLARVCPRR 62
           R W PGP     D+    S+ +A     RG       G  V AE +   D+G +      
Sbjct: 167 RCWVPGPQERLQDVHSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASE----- 221

Query: 63  PGAGRRCTVSPREADL-GPEKDTRLDLPRRPGPGPSGAEQ 101
               RRC V  R  D  G      L + R PGP  +  ++
Sbjct: 222 --ETRRCCVECRVQDPGGSTAQFPLMMDRPPGPRSAAGQR 259


>gi|239747453 PREDICTED: hypothetical protein XP_002347537 [Homo
           sapiens]
          Length = 282

 Score = 32.3 bits (72), Expect = 0.082
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 14/100 (14%)

Query: 9   RTWAPGPSNAALDLTLKGSKDKASGAGARG------AGREVVAEAKGRRDLGLARVCPRR 62
           R W PGP     D+    S+ +A     RG       G  V AE +   D+G +      
Sbjct: 167 RCWVPGPQERLQDVHSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASE----- 221

Query: 63  PGAGRRCTVSPREADL-GPEKDTRLDLPRRPGPGPSGAEQ 101
               RRC V  R  D  G      L + R PGP  +  ++
Sbjct: 222 --ETRRCCVECRVQDPGGSTAQFPLMMDRPPGPRSAAGQR 259


>gi|239741327 PREDICTED: hypothetical protein XP_002342174 [Homo
           sapiens]
          Length = 282

 Score = 32.3 bits (72), Expect = 0.082
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 14/100 (14%)

Query: 9   RTWAPGPSNAALDLTLKGSKDKASGAGARG------AGREVVAEAKGRRDLGLARVCPRR 62
           R W PGP     D+    S+ +A     RG       G  V AE +   D+G +      
Sbjct: 167 RCWVPGPQERLQDVHSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASE----- 221

Query: 63  PGAGRRCTVSPREADL-GPEKDTRLDLPRRPGPGPSGAEQ 101
               RRC V  R  D  G      L + R PGP  +  ++
Sbjct: 222 --ETRRCCVECRVQDPGGSTAQFPLMMDRPPGPRSAAGQR 259


>gi|46409434 hypothetical protein LOC388759 [Homo sapiens]
          Length = 237

 Score = 32.3 bits (72), Expect = 0.082
 Identities = 34/102 (33%), Positives = 39/102 (38%), Gaps = 17/102 (16%)

Query: 8   QRTWAPGPSNAALDLTLKGSKDKASGAGARGAGREVVAEA--KGRRDLGLARVC-----P 60
           +RT  P P NA L L  + S   A G G RG  R + A A   G R L  A         
Sbjct: 65  ERTRPPHPPNAVLLLQPEPSLTWAQGRGCRGHFRSLPAAASRSGSRTLRCASSDRSLREQ 124

Query: 61  RRPGAGRRCTVSPREADLGPEKDTRLDLPRRPGPGPSGAEQP 102
           ++  AG   T SP     GP          RP PG  G   P
Sbjct: 125 KQRRAGPDPTPSPAPPPAGP----------RPSPGSLGPSAP 156


>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 23/88 (26%)

Query: 9   RTWAPGPSNAALDLTLKGSKDKASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRR 68
           RT++PGP+          S  +AS  G  G+      EA+GR     AR  P   G    
Sbjct: 142 RTFSPGPA----------SPPRASPGGRPGS------EARGRSGAECARRVPLHHGP--- 182

Query: 69  CTVSPREADLGPEKDTRLDLPRRPGPGP 96
               P  + +G E+D +  L + P  GP
Sbjct: 183 ----PGASGVGSERDRKFQLHQTPARGP 206



 Score = 28.9 bits (63), Expect = 0.91
 Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 8   QRTWAPGPSNAALDLTLKGSKDKASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGR 67
           QRT A   + AAL ++ +  ++ A+GAG++   R   A + G     L RV    P    
Sbjct: 14  QRTPAAYANEAALAISGRADEEGAAGAGSKLWRRPRGAVSAGAPGSPLYRVSAPPPAP-- 71

Query: 68  RCTVSPREADLGPEKDTRLDLPRRPG----PGPSG 98
                P     GP +  R     RPG    PGP G
Sbjct: 72  ----PPPPPPGGPSRSERPRAGLRPGAFVSPGPLG 102


>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 23/88 (26%)

Query: 9   RTWAPGPSNAALDLTLKGSKDKASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRR 68
           RT++PGP+          S  +AS  G  G+      EA+GR     AR  P   G    
Sbjct: 142 RTFSPGPA----------SPPRASPGGRPGS------EARGRSGAECARRVPLHHGP--- 182

Query: 69  CTVSPREADLGPEKDTRLDLPRRPGPGP 96
               P  + +G E+D +  L + P  GP
Sbjct: 183 ----PGASGVGSERDRKFQLHQTPARGP 206



 Score = 28.9 bits (63), Expect = 0.91
 Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 8   QRTWAPGPSNAALDLTLKGSKDKASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGR 67
           QRT A   + AAL ++ +  ++ A+GAG++   R   A + G     L RV    P    
Sbjct: 14  QRTPAAYANEAALAISGRADEEGAAGAGSKLWRRPRGAVSAGAPGSPLYRVSAPPPAP-- 71

Query: 68  RCTVSPREADLGPEKDTRLDLPRRPG----PGPSG 98
                P     GP +  R     RPG    PGP G
Sbjct: 72  ----PPPPPPGGPSRSERPRAGLRPGAFVSPGPLG 102


>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 255

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 17  NAALDLTLK----GSKDKASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTVS 72
           NAA  L  +    G + +++    R A        +  R  G  R   RR GAG R    
Sbjct: 175 NAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPR 234

Query: 73  PREADLGPEKDTRLDLPRRP 92
           PR     P +  R   PRRP
Sbjct: 235 PRGPPRAPARGARWLRPRRP 254


>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
           sapiens]
          Length = 255

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 17  NAALDLTLK----GSKDKASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTVS 72
           NAA  L  +    G + +++    R A        +  R  G  R   RR GAG R    
Sbjct: 175 NAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMRRRLGAGERPAPR 234

Query: 73  PREADLGPEKDTRLDLPRRP 92
           PR     P +  R   PRRP
Sbjct: 235 PRGPPRAPARGARWLRPRRP 254


>gi|32698704 tectonin beta-propeller repeat containing 1 [Homo
           sapiens]
          Length = 1165

 Score = 31.2 bits (69), Expect = 0.18
 Identities = 31/123 (25%), Positives = 45/123 (36%), Gaps = 27/123 (21%)

Query: 6   LTQRTWAPGPSNAALDLTLKGSKDKASGAGA------RGAGREVVAEAKGRRDL---GLA 56
           L+ +TW    +    D +  GS      AG       RG+G    ++     ++   G  
Sbjct: 367 LSGKTWKAIIAARECDRSHSGSSSSLLSAGCFFGDEVRGSGESAPSDTDASSEVERPGPG 426

Query: 57  RVCPRRP---------------GAGRRCTVSPREADLGPEKDTRLDLPR-RPGPGPSGAE 100
           ++ P  P               GAGR  T      D  P + +R   P   PGP P+ AE
Sbjct: 427 QILPAEPLDDSKNATGNSASGLGAGR--TAEDTVEDACPAEGSREARPNTHPGPAPTPAE 484

Query: 101 QPW 103
            PW
Sbjct: 485 LPW 487


>gi|239746493 PREDICTED: hypothetical protein XP_002343745 [Homo
           sapiens]
          Length = 529

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 47  AKGRRDLGLARVCPRRPGAG--RRCTVSPREADLGPEKDTRLDLPRRPGPGPSGA 99
           A+  RD G A + PRRPG     R     R    GPE+   L  P   GPG  GA
Sbjct: 129 ARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGPERRAHLPGP-GAGPGFCGA 182



 Score = 26.2 bits (56), Expect = 5.9
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 60  PRRPGAGRRCTVSPREADLGPEKDTRLDLPRRPGPGPSGAEQP 102
           P  P  G R       ADL P +  R  + RRPG   + +  P
Sbjct: 122 PAPPAGGARKERDAGAADLSPRRPGRSGVARRPGDARTQSAGP 164


>gi|194353964 coiled-coil domain containing 157 [Homo sapiens]
          Length = 752

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 32  SGAGARGAGREVVAEAKGRRDLGLARVCPRRPGA---GRRCTVSPREADLGPEKDTRLDL 88
           S  G +GA   V A++     LG   +   R G    G+ CT  PR+    P +      
Sbjct: 630 SSKGTQGATPPVQAKSTSPGPLGRQHLPSSRTGRTLLGQPCTSPPRQPCTSPPRQPCTSP 689

Query: 89  PRRPGPGPS 97
           PR+P   PS
Sbjct: 690 PRQPCTSPS 698


>gi|239757300 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 128

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 5  VLTQRTWAPGPSNAALDLTLKGSKDKAS----GAGARGAGREVVAEAKGRRDLGLARVCP 60
          +L   TW    S  +      G KD+      GAG  G G    A AK R+   L    P
Sbjct: 20 LLQDTTWRRRISGMSTSWASPGQKDEVEYGVRGAGRVGGGGVRPALAKVRKRARLGPFKP 79

Query: 61 RRPGAG 66
          RR GAG
Sbjct: 80 RRAGAG 85


>gi|239751805 PREDICTED: hypothetical protein XP_002348006 [Homo
          sapiens]
          Length = 128

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 5  VLTQRTWAPGPSNAALDLTLKGSKDKAS----GAGARGAGREVVAEAKGRRDLGLARVCP 60
          +L   TW    S  +      G KD+      GAG  G G    A AK R+   L    P
Sbjct: 20 LLQDTTWRRRISGMSTSWASPGQKDEVEYGVRGAGRVGGGGVRPALAKVRKRARLGPFKP 79

Query: 61 RRPGAG 66
          RR GAG
Sbjct: 80 RRAGAG 85


>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 5/86 (5%)

Query: 12  APGPSNAALDLTLKGSKDKASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTV 71
           +P  SNA    T   S++    A  R +GR        R +    RV P RP        
Sbjct: 169 SPRVSNAP---TTPASRNPGLRAQERQSGRRAAGGGGARAEP--PRVPPCRPAGCSGGNR 223

Query: 72  SPREADLGPEKDTRLDLPRRPGPGPS 97
           S R A  GP    R   PR PG  P+
Sbjct: 224 SRRAAGAGPRTTRRKPPPRPPGTAPA 249


>gi|239746296 PREDICTED: hypothetical protein XP_002343726 [Homo
          sapiens]
          Length = 128

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 5  VLTQRTWAPGPSNAALDLTLKGSKDKAS----GAGARGAGREVVAEAKGRRDLGLARVCP 60
          +L   TW    S  +      G KD+      GAG  G G    A AK R+   L    P
Sbjct: 20 LLQDTTWRRRISGMSTSWASPGQKDEVEYGVRGAGRVGGGGVRPALAKVRKRARLGPFKP 79

Query: 61 RRPGAG 66
          RR GAG
Sbjct: 80 RRAGAG 85


>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
           sapiens]
          Length = 224

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 5/86 (5%)

Query: 12  APGPSNAALDLTLKGSKDKASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGRRCTV 71
           +P  SNA    T   S++    A  R +GR        R +    RV P RP        
Sbjct: 98  SPRVSNAP---TTPASRNPGLRAQERQSGRRAAGGGGARAEP--PRVPPCRPAGCSGGNR 152

Query: 72  SPREADLGPEKDTRLDLPRRPGPGPS 97
           S R A  GP    R   PR PG  P+
Sbjct: 153 SRRAAGAGPRTTRRKPPPRPPGTAPA 178


>gi|193082993 GTP binding protein 3 (mitochondrial) isoform III
          [Homo sapiens]
          Length = 471

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 30 KASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGR--RCTVSPREADLGPEKDTRLD 87
          ++SGA A G+G  + A + G+   G+A +    P +G   R   +PR+  L      RL 
Sbjct: 23 RSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGHALRILTAPRDLPLARHASLRLL 82

Query: 88 LPRRPG 93
             R G
Sbjct: 83 SDPRSG 88


>gi|193082991 GTP binding protein 3 (mitochondrial) isoform V
          [Homo sapiens]
          Length = 492

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 30 KASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGR--RCTVSPREADLGPEKDTRLD 87
          ++SGA A G+G  + A + G+   G+A +    P +G   R   +PR+  L      RL 
Sbjct: 23 RSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGHALRILTAPRDLPLARHASLRLL 82

Query: 88 LPRRPG 93
             R G
Sbjct: 83 SDPRSG 88


>gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV
          [Homo sapiens]
          Length = 524

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 30 KASGAGARGAGREVVAEAKGRRDLGLARVCPRRPGAGR--RCTVSPREADLGPEKDTRLD 87
          ++SGA A G+G  + A + G+   G+A +    P +G   R   +PR+  L      RL 
Sbjct: 23 RSSGAPAPGSGATIFALSSGQGRCGIAVIRTSGPASGHALRILTAPRDLPLARHASLRLL 82

Query: 88 LPRRPG 93
             R G
Sbjct: 83 SDPRSG 88


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.135    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,435,436
Number of Sequences: 37866
Number of extensions: 287716
Number of successful extensions: 1029
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 969
Number of HSP's gapped (non-prelim): 142
length of query: 103
length of database: 18,247,518
effective HSP length: 74
effective length of query: 29
effective length of database: 15,445,434
effective search space: 447917586
effective search space used: 447917586
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.