Search of human proteins with 239754597

Search of human proteins with 239754597

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754597 PREDICTED: hypothetical protein [Homo sapiens]
         (170 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754597 PREDICTED: hypothetical protein [Homo sapiens]           360   e-100
gi|239749137 PREDICTED: hypothetical protein XP_002346922 [Homo ...   360   e-100
gi|239743209 PREDICTED: hypothetical protein XP_002342803 [Homo ...   360   e-100
gi|239508884 PREDICTED: hypothetical protein [Homo sapiens]           360   e-100
gi|85815829 SH3-domain binding protein 1 [Homo sapiens]                44   9e-05
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     40   0.001
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             39   0.003
gi|194239681 tubulin tyrosine ligase-like family, member 10 isof...    38   0.004
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom...    37   0.008
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom...    37   0.008
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]            37   0.011
gi|169211906 PREDICTED: hypothetical protein [Homo sapiens]            37   0.011
gi|169211049 PREDICTED: hypothetical protein [Homo sapiens]            37   0.011
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]            37   0.011
gi|19924099 synapsin I isoform Ia [Homo sapiens]                       37   0.011
gi|19924097 synapsin I isoform Ib [Homo sapiens]                       37   0.011
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]            36   0.018
gi|239753463 PREDICTED: hypothetical protein XP_002345663 [Homo ...    36   0.018
gi|239748026 PREDICTED: hypothetical protein [Homo sapiens]            36   0.018
gi|239741922 PREDICTED: hypothetical protein XP_002344247 [Homo ...    36   0.018
gi|123173757 RAVER1 [Homo sapiens]                                     35   0.024
gi|239751142 PREDICTED: hypothetical protein XP_002347724 [Homo ...    35   0.041
gi|226817316 SH3 domain containing 20 [Homo sapiens]                   35   0.041
gi|55750053 atrophin-1 [Homo sapiens]                                  35   0.041
gi|55750041 atrophin-1 [Homo sapiens]                                  35   0.041
gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]             35   0.041
gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]              35   0.041
gi|239755891 PREDICTED: hypothetical protein [Homo sapiens]            34   0.053
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ...    34   0.053
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ...    34   0.053

>gi|239754597 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 170

 Score =  360 bits (925), Expect = e-100
 Identities = 170/170 (100%), Positives = 170/170 (100%)

Query: 1   MELPMAQAAWGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQN 60
           MELPMAQAAWGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQN
Sbjct: 1   MELPMAQAAWGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQN 60

Query: 61  RPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRP 120
           RPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRP
Sbjct: 61  RPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRP 120

Query: 121 ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRASGRPQELHGPAR 170
           ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRASGRPQELHGPAR
Sbjct: 121 ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRASGRPQELHGPAR 170


>gi|239749137 PREDICTED: hypothetical protein XP_002346922 [Homo
           sapiens]
          Length = 170

 Score =  360 bits (925), Expect = e-100
 Identities = 170/170 (100%), Positives = 170/170 (100%)

Query: 1   MELPMAQAAWGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQN 60
           MELPMAQAAWGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQN
Sbjct: 1   MELPMAQAAWGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQN 60

Query: 61  RPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRP 120
           RPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRP
Sbjct: 61  RPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRP 120

Query: 121 ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRASGRPQELHGPAR 170
           ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRASGRPQELHGPAR
Sbjct: 121 ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRASGRPQELHGPAR 170


>gi|239743209 PREDICTED: hypothetical protein XP_002342803 [Homo
           sapiens]
          Length = 170

 Score =  360 bits (925), Expect = e-100
 Identities = 170/170 (100%), Positives = 170/170 (100%)

Query: 1   MELPMAQAAWGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQN 60
           MELPMAQAAWGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQN
Sbjct: 1   MELPMAQAAWGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQN 60

Query: 61  RPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRP 120
           RPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRP
Sbjct: 61  RPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRP 120

Query: 121 ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRASGRPQELHGPAR 170
           ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRASGRPQELHGPAR
Sbjct: 121 ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRASGRPQELHGPAR 170


>gi|239508884 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 170

 Score =  360 bits (925), Expect = e-100
 Identities = 170/170 (100%), Positives = 170/170 (100%)

Query: 1   MELPMAQAAWGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQN 60
           MELPMAQAAWGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQN
Sbjct: 1   MELPMAQAAWGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQN 60

Query: 61  RPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRP 120
           RPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRP
Sbjct: 61  RPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRP 120

Query: 121 ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRASGRPQELHGPAR 170
           ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRASGRPQELHGPAR
Sbjct: 121 ARTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRASGRPQELHGPAR 170


>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
          Length = 701

 Score = 43.5 bits (101), Expect = 9e-05
 Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 10/109 (9%)

Query: 65  LRSAAAP-PLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAG--ATQRSPATWRPA 121
           L S A P P +  A  P+PA   A +L+  A++ RT     P  A    T+  P T  P 
Sbjct: 499 LPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPV 558

Query: 122 -----RTQPPGGVRPREPEPESQGRRASLEWSPGPSGKGLRASGRPQEL 165
                RT+ P   RP  P P+  G R+S    P P G G  + G PQ L
Sbjct: 559 EDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSG--SPGTPQAL 605


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 49/191 (25%), Positives = 62/191 (32%), Gaps = 45/191 (23%)

Query: 12  QRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQNRPRLLRSAAAP 71
           QR   R    G +  R A R      G TP   P   RG  A+            +AAAP
Sbjct: 79  QRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGAPAAA-----------AAAAP 127

Query: 72  PLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWR------------ 119
           P +     P P + +A +   +A +   A    PP  G  Q  P   R            
Sbjct: 128 PPT--PAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPA 185

Query: 120 -PARTQPPGGVR-----------------PREPEPESQGRRASLEWSPGPSGKGLRASG- 160
            P    PP G R                 P+ P P  Q +    +  P P G  +RA G 
Sbjct: 186 APPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGA 245

Query: 161 -RPQELHGPAR 170
            RP  L    R
Sbjct: 246 ARPVSLREVVR 256


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 16/122 (13%)

Query: 41  PKPHPEGLRGGGASGRRFQNRPRLLRSAAAPPLSHLAG------------TPSPASRIAL 88
           P P P   RG G  G+R + RP   R A+  P     G            +P P  R + 
Sbjct: 441 PGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPR-SW 499

Query: 89  SLSCQASQFRTAWHQEPPGAGATQRSPATWRPARTQPPGGVRPREPEPE-SQGRRASLEW 147
           S S   S+ R+   ++ P   +  RSP+  +P      G  R R  E E ++ RR S  +
Sbjct: 500 SSSRSPSKSRSRSAEKRP--HSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSY 557

Query: 148 SP 149
           SP
Sbjct: 558 SP 559



 Score = 37.0 bits (84), Expect = 0.008
 Identities = 44/155 (28%), Positives = 58/155 (37%), Gaps = 29/155 (18%)

Query: 43  PHPEGLRGGGASG-----RRFQNRPRLLRSAAAPP--LSHLAGTPSPASRIALSLSCQAS 95
           P  +G RGG A+G     RR + R R  RS+A+ P         P+P    + SLS   S
Sbjct: 370 PSSQG-RGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARS 428

Query: 96  QFRTAWHQEPPGAG---------------ATQRSPATWRPARTQPPGGVRPREPEPESQG 140
              +   +  PG G               A +R P   RPA T P  G   R   PE + 
Sbjct: 429 SSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRA-RPASTSPSPGAHGRRGGPEGKS 487

Query: 141 RRAS-----LEWSPGPSGKGLRASGRPQELHGPAR 170
              S       WS   S    R+    +  H P+R
Sbjct: 488 SSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSR 522


>gi|194239681 tubulin tyrosine ligase-like family, member 10 isoform
           1 [Homo sapiens]
          Length = 673

 Score = 38.1 bits (87), Expect = 0.004
 Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 9/103 (8%)

Query: 41  PKPHPEGLRGGGASGRRFQNRPRLLRSAAAPPLSHL-----AGTPSPASRIALSLSCQAS 95
           P+PH     GG  S RR+   P     ++ PP+ H      A  P+P   +         
Sbjct: 572 PRPH----LGGSCSLRRWPPLPTRQAKSSGPPMPHAPDQPGARRPAPPPLVPQRPRPPGP 627

Query: 96  QFRTAWHQEPPGAGATQRSPATWRPARTQPPGGVRPREPEPES 138
              +A   EP   G  Q       PA+   PG  +    EPE+
Sbjct: 628 DLDSAHDGEPQAPGTEQSGTGNRHPAQEPSPGTAKEEREEPEN 670


>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
           sapiens]
          Length = 1487

 Score = 37.0 bits (84), Expect = 0.008
 Identities = 46/174 (26%), Positives = 60/174 (34%), Gaps = 31/174 (17%)

Query: 6   AQAAWGQRGQCRGLG-SGLLDPRGA--------ERGWCLVSGFTPKPHPEGLRGG-GASG 55
           A+ A G+RG+    G +G   P GA        E+G     G    P P+G  G  G  G
Sbjct: 817 ARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 876

Query: 56  RRFQNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSP 115
                 P+  R A  PP +   G P  A R+                  PPG+      P
Sbjct: 877 PTGVTGPKGARGAQGPPGA--TGFPGAAGRVG-----------------PPGSNGNPGPP 917

Query: 116 ATWRPARTQPPGGVRPREPEPESQGRRASLEWSPGPSG-KGLRASGRPQELHGP 168
               P+    P G R  +  P  +     L+   GP G KG      P    GP
Sbjct: 918 GPPGPSGKDGPKGAR-GDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 970


>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
           sapiens]
          Length = 1418

 Score = 37.0 bits (84), Expect = 0.008
 Identities = 46/174 (26%), Positives = 60/174 (34%), Gaps = 31/174 (17%)

Query: 6   AQAAWGQRGQCRGLG-SGLLDPRGA--------ERGWCLVSGFTPKPHPEGLRGG-GASG 55
           A+ A G+RG+    G +G   P GA        E+G     G    P P+G  G  G  G
Sbjct: 748 ARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQG 807

Query: 56  RRFQNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSP 115
                 P+  R A  PP +   G P  A R+                  PPG+      P
Sbjct: 808 PTGVTGPKGARGAQGPPGA--TGFPGAAGRVG-----------------PPGSNGNPGPP 848

Query: 116 ATWRPARTQPPGGVRPREPEPESQGRRASLEWSPGPSG-KGLRASGRPQELHGP 168
               P+    P G R  +  P  +     L+   GP G KG      P    GP
Sbjct: 849 GPPGPSGKDGPKGAR-GDSGPPGRAGEPGLQGPAGPPGEKGEPGDDGPSGAEGP 901


>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 466

 Score = 36.6 bits (83), Expect = 0.011
 Identities = 50/161 (31%), Positives = 59/161 (36%), Gaps = 42/161 (26%)

Query: 11  GQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQNR---PRLLRS 67
           G   +C+GLGS           W   SG  P P     R GGA+G R Q R    R    
Sbjct: 194 GSSRRCQGLGSS----------WG-GSGTPPPPRALWNRHGGAAGARAQVRGSEKRACPG 242

Query: 68  AAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQR----SPATWRP-AR 122
           +  PP S LAG     +R                     G G  QR    +P++    AR
Sbjct: 243 STLPPSSVLAGCVGTRAR---------------------GHGGVQRQRFSAPSSHSTGAR 281

Query: 123 TQP-PGGVRPREPEPESQGRRASLEWSPGPSG-KGLRASGR 161
           T P P   RP +P P      A L    G SG   L  SGR
Sbjct: 282 TLPTPSRARPGKPAPRGSAPPARLRGGGGGSGLTQLVGSGR 322


>gi|169211906 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 210

 Score = 36.6 bits (83), Expect = 0.011
 Identities = 50/178 (28%), Positives = 65/178 (36%), Gaps = 40/178 (22%)

Query: 11  GQRGQCRGLGSGLLDPRGAERGWCLV---------SGFTP-----KPHPEGLRGGGASGR 56
           G  G  RGLG G     G  RGW +          SG  P     +  P      GA G 
Sbjct: 5   GHCGWGRGLGEGGGVTVGRLRGWRVECQNFVIVENSGKPPAGQGHEDPPRSTAPRGAQGP 64

Query: 57  RFQNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQ-EPPGAGATQRSP 115
           R  +RP L    +AP LS              S  C+  + R    +    G     R  
Sbjct: 65  R--SRPPLGADTSAPDLSRT------------SSRCRRRRRRGCVSRLGSEGGRRPARHR 110

Query: 116 ATWRPARTQP--------PGGVRPRE--PEPESQGRRASLEWSPGPSGKGLRASGRPQ 163
            TW P R +P        P GV P +  PEP  +G + +    PG  G+G  A+  P+
Sbjct: 111 PTW-PRRAEPQVPEECSLPAGVLPAQHGPEPRPRGLQPAAHQLPGERGRGSTAAQHPR 167


>gi|169211049 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 210

 Score = 36.6 bits (83), Expect = 0.011
 Identities = 50/178 (28%), Positives = 65/178 (36%), Gaps = 40/178 (22%)

Query: 11  GQRGQCRGLGSGLLDPRGAERGWCLV---------SGFTP-----KPHPEGLRGGGASGR 56
           G  G  RGLG G     G  RGW +          SG  P     +  P      GA G 
Sbjct: 5   GHCGWGRGLGEGGGVTVGRLRGWRVECQNFVIVENSGKPPAGQGHEDPPRSTAPRGAQGP 64

Query: 57  RFQNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQ-EPPGAGATQRSP 115
           R  +RP L    +AP LS              S  C+  + R    +    G     R  
Sbjct: 65  R--SRPPLGADTSAPDLSRT------------SSRCRRRRRRGCVSRLGSEGGRRPARHR 110

Query: 116 ATWRPARTQP--------PGGVRPRE--PEPESQGRRASLEWSPGPSGKGLRASGRPQ 163
            TW P R +P        P GV P +  PEP  +G + +    PG  G+G  A+  P+
Sbjct: 111 PTW-PRRAEPQVPEECSLPAGVLPAQHGPEPRPRGLQPAAHQLPGERGRGSTAAQHPR 167


>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 251

 Score = 36.6 bits (83), Expect = 0.011
 Identities = 39/137 (28%), Positives = 49/137 (35%), Gaps = 29/137 (21%)

Query: 42  KPHPEGLRGGGASGR-RFQNRPRLLRSAAAP------------PLSHLAGTPSPASRIAL 88
           +PH +G  GGG  GR R  +R    R+ A P            P    A +P PA+    
Sbjct: 5   RPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGAVP 64

Query: 89  SLSCQASQFRTAWHQEPPGAG------------ATQRSPATWRPARTQPPGGVRPREPEP 136
           S    A   R A   E P  G             + R P + RP R    G  RP +  P
Sbjct: 65  SPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPGKGPP 124

Query: 137 ESQGRRASLEWSPGPSG 153
            +  RR      P P G
Sbjct: 125 PNPSRRL----PPAPPG 137


>gi|19924099 synapsin I isoform Ia [Homo sapiens]
          Length = 705

 Score = 36.6 bits (83), Expect = 0.011
 Identities = 39/145 (26%), Positives = 54/145 (37%), Gaps = 18/145 (12%)

Query: 21  SGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQNRPRLLRSAAAPPLSHLAGTP 80
           SGL  P G+     L S  +    P         G+  Q+RP +     APP +    +P
Sbjct: 494 SGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRP-VAGGPGAPPAARPPASP 552

Query: 81  SPASRIALSLSCQASQFRTAWHQEPPGA-----------GATQRSPATWRPARTQPPGGV 129
           SP  +       QA++  +     PP A           G  Q+ P    P R     G 
Sbjct: 553 SPQRQAGPP---QATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGP 609

Query: 130 RPREPEPESQGRRASLEWSPGPSGK 154
            PR   P +Q  R S    PGP+G+
Sbjct: 610 VPRTGPPTTQQPRPS---GPGPAGR 631



 Score = 33.9 bits (76), Expect = 0.069
 Identities = 39/117 (33%), Positives = 46/117 (39%), Gaps = 28/117 (23%)

Query: 59  QNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATW 118
           Q  PR  +  A+P       TPSP    AL L  Q SQ       +P G  A QR P   
Sbjct: 416 QALPRQRQRDASPGRGSHGQTPSPG---ALPLGRQTSQ-------QPAGPPAQQRPP--- 462

Query: 119 RPARTQPPGGVRPREPEPESQGRRASLEWSPGPSGK----GL---RASGRPQELHGP 168
                 P GG  P +P P  Q +   L+  P P G+    GL     S  PQ L  P
Sbjct: 463 ------PQGG--PPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSP 511



 Score = 31.2 bits (69), Expect = 0.45
 Identities = 39/143 (27%), Positives = 50/143 (34%), Gaps = 20/143 (13%)

Query: 38  GFTPKPHPEGLRGGGASGRRFQNRPRLLRSAAAPPLSHLAGTP------SPASRIALSLS 91
           G  P+P P   R G    +R   + +   S   PP    AG+P      SP S      S
Sbjct: 465 GGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPP----AGSPLPQRLPSPTSAPQQPAS 520

Query: 92  CQASQFRTAWHQEPPGAGATQRSPATWRPARTQPPGGVRPREPEPESQGRRASLEWSPGP 151
             A   +    Q  P AG     PA   PA   P      R+  P    R+ S+     P
Sbjct: 521 QAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQ-----RQAGPPQATRQTSVSGPAPP 575

Query: 152 SGKGLRASGR-----PQELHGPA 169
              G    G+     PQ+  GPA
Sbjct: 576 KASGAPPGGQQRQGPPQKPPGPA 598


>gi|19924097 synapsin I isoform Ib [Homo sapiens]
          Length = 669

 Score = 36.6 bits (83), Expect = 0.011
 Identities = 39/145 (26%), Positives = 54/145 (37%), Gaps = 18/145 (12%)

Query: 21  SGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGASGRRFQNRPRLLRSAAAPPLSHLAGTP 80
           SGL  P G+     L S  +    P         G+  Q+RP +     APP +    +P
Sbjct: 494 SGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRP-VAGGPGAPPAARPPASP 552

Query: 81  SPASRIALSLSCQASQFRTAWHQEPPGA-----------GATQRSPATWRPARTQPPGGV 129
           SP  +       QA++  +     PP A           G  Q+ P    P R     G 
Sbjct: 553 SPQRQAGPP---QATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGP 609

Query: 130 RPREPEPESQGRRASLEWSPGPSGK 154
            PR   P +Q  R S    PGP+G+
Sbjct: 610 VPRTGPPTTQQPRPS---GPGPAGR 631



 Score = 33.9 bits (76), Expect = 0.069
 Identities = 39/117 (33%), Positives = 46/117 (39%), Gaps = 28/117 (23%)

Query: 59  QNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATW 118
           Q  PR  +  A+P       TPSP    AL L  Q SQ       +P G  A QR P   
Sbjct: 416 QALPRQRQRDASPGRGSHGQTPSPG---ALPLGRQTSQ-------QPAGPPAQQRPP--- 462

Query: 119 RPARTQPPGGVRPREPEPESQGRRASLEWSPGPSGK----GL---RASGRPQELHGP 168
                 P GG  P +P P  Q +   L+  P P G+    GL     S  PQ L  P
Sbjct: 463 ------PQGG--PPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSPLPQRLPSP 511



 Score = 31.2 bits (69), Expect = 0.45
 Identities = 39/143 (27%), Positives = 50/143 (34%), Gaps = 20/143 (13%)

Query: 38  GFTPKPHPEGLRGGGASGRRFQNRPRLLRSAAAPPLSHLAGTP------SPASRIALSLS 91
           G  P+P P   R G    +R   + +   S   PP    AG+P      SP S      S
Sbjct: 465 GGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPP----AGSPLPQRLPSPTSAPQQPAS 520

Query: 92  CQASQFRTAWHQEPPGAGATQRSPATWRPARTQPPGGVRPREPEPESQGRRASLEWSPGP 151
             A   +    Q  P AG     PA   PA   P      R+  P    R+ S+     P
Sbjct: 521 QAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQ-----RQAGPPQATRQTSVSGPAPP 575

Query: 152 SGKGLRASGR-----PQELHGPA 169
              G    G+     PQ+  GPA
Sbjct: 576 KASGAPPGGQQRQGPPQKPPGPA 598


>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 480

 Score = 35.8 bits (81), Expect = 0.018
 Identities = 44/157 (28%), Positives = 58/157 (36%), Gaps = 29/157 (18%)

Query: 11  GQRGQCRGLGSGLLDPRGAERGWC-LVSGFTPKPHPEGLRGGGASGRRFQNRPRLLRSAA 69
           G++ QCR L           +G C L+    P+P P    GG  +   FQ  P  L +  
Sbjct: 131 GKKTQCRSLFL-------RTKGLCALLLELPPRPPPNLQEGGQRA--IFQRPPVYLGNKP 181

Query: 70  APPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRPARTQPPGGV 129
            PP    +    P S+  L               +   A A Q  P T  PAR + PG  
Sbjct: 182 TPPRQEGSFGGRPKSQPPLP--------------QETAAPAPQPGP-TAPPARVREPGRA 226

Query: 130 RPREPEPESQGRRASLEWSPGPS----GKGLRASGRP 162
                EP  + R A    +PGP         RA+GRP
Sbjct: 227 EGASREPRLRSRAARPPPAPGPGALSRASRSRAAGRP 263


>gi|239753463 PREDICTED: hypothetical protein XP_002345663 [Homo
           sapiens]
          Length = 119

 Score = 35.8 bits (81), Expect = 0.018
 Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 2/83 (2%)

Query: 67  SAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRPARTQPP 126
           + A PPL+ L    S +S+I +S S + S  RT W    P      R PA   P+  + P
Sbjct: 5   AGADPPLAVLVREASYSSQICVSSSVRVS-LRT-WKSAGPLRSREARGPAEQPPSAEKEP 62

Query: 127 GGVRPREPEPESQGRRASLEWSP 149
           G     +PE  S G  A    SP
Sbjct: 63  GLTGTVQPEGASVGTEAGESGSP 85


>gi|239748026 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 119

 Score = 35.8 bits (81), Expect = 0.018
 Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 2/83 (2%)

Query: 67  SAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRPARTQPP 126
           + A PPL+ L    S +S+I +S S + S  RT W    P      R PA   P+  + P
Sbjct: 5   AGADPPLAVLVREASYSSQICVSSSVRVS-LRT-WKSAGPLRSREARGPAEQPPSAEKEP 62

Query: 127 GGVRPREPEPESQGRRASLEWSP 149
           G     +PE  S G  A    SP
Sbjct: 63  GLTGTVQPEGASVGTEAGESGSP 85


>gi|239741922 PREDICTED: hypothetical protein XP_002344247 [Homo
           sapiens]
          Length = 119

 Score = 35.8 bits (81), Expect = 0.018
 Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 2/83 (2%)

Query: 67  SAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRPARTQPP 126
           + A PPL+ L    S +S+I +S S + S  RT W    P      R PA   P+  + P
Sbjct: 5   AGADPPLAVLVREASYSSQICVSSSVRVS-LRT-WKSAGPLRSREARGPAEQPPSAEKEP 62

Query: 127 GGVRPREPEPESQGRRASLEWSP 149
           G     +PE  S G  A    SP
Sbjct: 63  GLTGTVQPEGASVGTEAGESGSP 85


>gi|123173757 RAVER1 [Homo sapiens]
          Length = 756

 Score = 35.4 bits (80), Expect = 0.024
 Identities = 38/126 (30%), Positives = 49/126 (38%), Gaps = 14/126 (11%)

Query: 12  QRGQCRGLGSGLLDPRGAERGWCLV----SGFTPKPHPEGLRGGGASGRRFQNRPRLLRS 67
           +RG+   L   +L P G +R    +    +  TP P P GLRG G  G +  + P     
Sbjct: 448 RRGKPPPLLPSVLGPAGGDREALGLGPPAAQLTPPPAPVGLRGSGLRGLQKDSGP----- 502

Query: 68  AAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWH---QEPPGAGATQRS--PATWRPAR 122
              PP   L G P    RI L+          A +   +E  G G   RS  PA   P  
Sbjct: 503 LPTPPGVSLLGEPPKDYRIPLNPYLNLHSLLPASNLAGKEARGWGGAGRSRRPAEGPPTN 562

Query: 123 TQPPGG 128
              PGG
Sbjct: 563 PPAPGG 568


>gi|239751142 PREDICTED: hypothetical protein XP_002347724 [Homo
           sapiens]
          Length = 364

 Score = 34.7 bits (78), Expect = 0.041
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 10  WGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGLRGGGAS 54
           W     C     GLL PRG+ RGW    G   + HP  +R  GAS
Sbjct: 322 WPGAAGCTADRRGLLGPRGSGRGWVATPG---QRHPGSVRAAGAS 363


>gi|226817316 SH3 domain containing 20 [Homo sapiens]
          Length = 263

 Score = 34.7 bits (78), Expect = 0.041
 Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 10/80 (12%)

Query: 101 WH--QEPPG------AGATQRSPATWRPARTQPPGG-VRPREPEPESQGRR-ASLEWSPG 150
           WH  +EP G      A   +  PA   PA   PPG    P  PEP +   R  S   + G
Sbjct: 46  WHVRREPGGRPFYLPAQYVRELPALGNPAAAAPPGPHPSPAAPEPLAYDYRFVSAAATAG 105

Query: 151 PSGKGLRASGRPQELHGPAR 170
           P G    + GR   L GPA+
Sbjct: 106 PDGAPEESGGRASSLCGPAQ 125


>gi|55750053 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 34.7 bits (78), Expect = 0.041
 Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 3/98 (3%)

Query: 71  PPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRPARTQPPGGVR 130
           PP+  +  + +  S +  +++   + ++TA    PP  G    SP  +   +T  P G +
Sbjct: 602 PPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAY---KTATPPGYK 658

Query: 131 PREPEPESQGRRASLEWSPGPSGKGLRASGRPQELHGP 168
           P  P     G       +  P+G G    G P    GP
Sbjct: 659 PGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGP 696


>gi|55750041 atrophin-1 [Homo sapiens]
          Length = 1190

 Score = 34.7 bits (78), Expect = 0.041
 Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 3/98 (3%)

Query: 71  PPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRSPATWRPARTQPPGGVR 130
           PP+  +  + +  S +  +++   + ++TA    PP  G    SP  +   +T  P G +
Sbjct: 602 PPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAPSPGAY---KTATPPGYK 658

Query: 131 PREPEPESQGRRASLEWSPGPSGKGLRASGRPQELHGP 168
           P  P     G       +  P+G G    G P    GP
Sbjct: 659 PGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGP 696


>gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]
          Length = 694

 Score = 34.7 bits (78), Expect = 0.041
 Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 6/120 (5%)

Query: 41  PKPHPEGLRGGGASGRRFQNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTA 100
           P P P+      A G     R    ++   P  +   G   P  R A      +S   + 
Sbjct: 190 PAPEPKHPARAPARGDSEDRRGPGQKTGPDPASAPGRGNYGPPVRRASEARMSSSSRDSE 249

Query: 101 WHQEPPGAGATQRSPATWRPART-----QPPGGVR-PREPEPESQGRRASLEWSPGPSGK 154
                 GAG + RSPA  R A +       PG V+ P  P+P   G        PGP+G+
Sbjct: 250 SWDHSGGAGDSSRSPAGLRRANSVQASRPAPGSVQSPAPPQPGQPGTPGGSRPGPGPAGR 309


>gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]
          Length = 690

 Score = 34.7 bits (78), Expect = 0.041
 Identities = 32/120 (26%), Positives = 44/120 (36%), Gaps = 6/120 (5%)

Query: 41  PKPHPEGLRGGGASGRRFQNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTA 100
           P P P+      A G     R    ++   P  +   G   P  R A      +S   + 
Sbjct: 186 PAPEPKHPARAPARGDSEDRRGPGQKTGPDPASAPGRGNYGPPVRRASEARMSSSSRDSE 245

Query: 101 WHQEPPGAGATQRSPATWRPART-----QPPGGVR-PREPEPESQGRRASLEWSPGPSGK 154
                 GAG + RSPA  R A +       PG V+ P  P+P   G        PGP+G+
Sbjct: 246 SWDHSGGAGDSSRSPAGLRRANSVQASRPAPGSVQSPAPPQPGQPGTPGGSRPGPGPAGR 305


>gi|239755891 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 246

 Score = 34.3 bits (77), Expect = 0.053
 Identities = 32/93 (34%), Positives = 40/93 (43%), Gaps = 16/93 (17%)

Query: 12  QRGQCRGLGSGLLDPRGAE---RGW-----CLVSGFTPK-----PHPEGLRGGGASGRRF 58
           +RG+CRG+G      RG+E   RGW      L  G  P+     P    LR    S    
Sbjct: 96  RRGRCRGIGPSAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPR 155

Query: 59  QNRPRLLRSAAAPPLSHLAGTPSPASRIALSLS 91
           + RPRL   AA P  + LA  P+ A      LS
Sbjct: 156 RTRPRL---AALPVSAPLAPRPAAAEAAFQELS 185


>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
           sapiens]
          Length = 647

 Score = 34.3 bits (77), Expect = 0.053
 Identities = 47/180 (26%), Positives = 61/180 (33%), Gaps = 17/180 (9%)

Query: 6   AQAAWGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGL---RGGGASGRRFQNRP 62
           A A  G RG+    G GL   RG             +P   G    R     G   Q+  
Sbjct: 301 AAAGRGSRGEHPACGVGLA--RGTAPQPASTWALAARPRAGGTWTSRFEAQRGCAHQDGQ 358

Query: 63  RLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPP-----GAGATQRSPAT 117
           R  R  A    S  A   SP  R         +  +    + PP     GAG  +  PA 
Sbjct: 359 RRTRDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRPPCARPSGAGPAREGPAA 418

Query: 118 W-----RPARTQPPGGVRPREPEPES-QGRRASLEWSPG-PSGKGLRASGRPQELHGPAR 170
           W      P   +P G  +  EP P + +G  AS  W  G  +G+G    G  +     AR
Sbjct: 419 WPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDPGGGSRARRRAAR 478


>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
           sapiens]
          Length = 647

 Score = 34.3 bits (77), Expect = 0.053
 Identities = 47/180 (26%), Positives = 61/180 (33%), Gaps = 17/180 (9%)

Query: 6   AQAAWGQRGQCRGLGSGLLDPRGAERGWCLVSGFTPKPHPEGL---RGGGASGRRFQNRP 62
           A A  G RG+    G GL   RG             +P   G    R     G   Q+  
Sbjct: 301 AAAGRGSRGEHPACGVGLA--RGTAPQPASTWALAARPRAGGTWTSRFEAQRGCAHQDGQ 358

Query: 63  RLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPP-----GAGATQRSPAT 117
           R  R  A    S  A   SP  R         +  +    + PP     GAG  +  PA 
Sbjct: 359 RRTRDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRPPCARPSGAGPAREGPAA 418

Query: 118 W-----RPARTQPPGGVRPREPEPES-QGRRASLEWSPG-PSGKGLRASGRPQELHGPAR 170
           W      P   +P G  +  EP P + +G  AS  W  G  +G+G    G  +     AR
Sbjct: 419 WPGGAPTPPHARPTGRRQDPEPGPRAPRGGPASSGWHAGSAAGRGWDPGGGSRARRRAAR 478


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.133    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,129,302
Number of Sequences: 37866
Number of extensions: 696381
Number of successful extensions: 3172
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 418
Number of HSP's that attempted gapping in prelim test: 2816
Number of HSP's gapped (non-prelim): 716
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.