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Search of human proteins with 239754588
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754588 PREDICTED: similar to SLC29A4 protein [Homo
sapiens]
(193 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754588 PREDICTED: similar to SLC29A4 protein [Homo sapiens] 400 e-112
gi|239743194 PREDICTED: similar to SLC29A4 protein [Homo sapiens] 380 e-106
gi|239743171 PREDICTED: hypothetical protein XP_002342767 [Homo ... 380 e-106
gi|239508863 PREDICTED: similar to SLC29A4 protein [Homo sapiens] 380 e-106
gi|239508835 PREDICTED: similar to SLC29A4 protein [Homo sapiens] 380 e-106
gi|239752639 PREDICTED: hypothetical protein XP_002347643 [Homo ... 245 1e-65
gi|100913034 solute carrier family 29 (nucleoside transporters),... 160 8e-40
gi|100913032 solute carrier family 29 (nucleoside transporters),... 160 8e-40
gi|148596922 solute carrier family 29 (nucleoside transporters),... 40 0.001
gi|38708299 solute carrier family 29 (nucleoside transporters), ... 37 0.008
gi|118582267 equilibrative nucleoside transporter 1 [Homo sapiens] 36 0.018
gi|118582265 equilibrative nucleoside transporter 1 [Homo sapiens] 36 0.018
gi|118582262 equilibrative nucleoside transporter 1 [Homo sapiens] 36 0.018
gi|118582260 equilibrative nucleoside transporter 1 [Homo sapiens] 36 0.018
gi|4826716 equilibrative nucleoside transporter 1 [Homo sapiens] 36 0.018
gi|117938310 sine oculis binding protein homolog [Homo sapiens] 31 0.75
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 30 1.3
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 30 1.3
gi|39653317 jumonji domain containing 2D [Homo sapiens] 29 2.8
gi|161019170 mucin 5AC [Homo sapiens] 28 3.7
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 28 3.7
gi|134031945 SCO-spondin [Homo sapiens] 28 3.7
gi|14165276 esophageal cancer related gene 4 protein [Homo sapiens] 28 4.8
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 28 4.8
gi|23943862 N-acetyltransferase 14 [Homo sapiens] 28 4.8
gi|51093381 leptin receptor isoform 3 [Homo sapiens] 28 6.3
gi|51093379 leptin receptor isoform 2 [Homo sapiens] 28 6.3
gi|40254464 leptin receptor isoform 1 [Homo sapiens] 28 6.3
gi|171906567 peripheral benzodiazepine receptor-associated prote... 28 6.3
gi|171906559 peripheral benzodiazepine receptor-associated prote... 28 6.3
>gi|239754588 PREDICTED: similar to SLC29A4 protein [Homo sapiens]
Length = 193
Score = 400 bits (1027), Expect = e-112
Identities = 193/193 (100%), Positives = 193/193 (100%)
Query: 1 MDSGHALEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLT 60
MDSGHALEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLT
Sbjct: 1 MDSGHALEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLT 60
Query: 61 YILVALAAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWR 120
YILVALAAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWR
Sbjct: 61 YILVALAAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWR 120
Query: 121 LLSRDGRNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSR 180
LLSRDGRNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSR
Sbjct: 121 LLSRDGRNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSR 180
Query: 181 ERPIPSPSEERSR 193
ERPIPSPSEERSR
Sbjct: 181 ERPIPSPSEERSR 193
>gi|239743194 PREDICTED: similar to SLC29A4 protein [Homo sapiens]
Length = 307
Score = 380 bits (975), Expect = e-106
Identities = 183/184 (99%), Positives = 183/184 (99%)
Query: 7 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 66
LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL
Sbjct: 58 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 117
Query: 67 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWRLLSRDG 126
AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWRLLSRDG
Sbjct: 118 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWRLLSRDG 177
Query: 127 RNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSRERPIPS 186
RNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSRERPIPS
Sbjct: 178 RNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSRERPIPS 237
Query: 187 PSEE 190
PS E
Sbjct: 238 PSSE 241
>gi|239743171 PREDICTED: hypothetical protein XP_002342767 [Homo
sapiens]
Length = 307
Score = 380 bits (975), Expect = e-106
Identities = 183/184 (99%), Positives = 183/184 (99%)
Query: 7 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 66
LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL
Sbjct: 58 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 117
Query: 67 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWRLLSRDG 126
AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWRLLSRDG
Sbjct: 118 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWRLLSRDG 177
Query: 127 RNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSRERPIPS 186
RNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSRERPIPS
Sbjct: 178 RNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSRERPIPS 237
Query: 187 PSEE 190
PS E
Sbjct: 238 PSSE 241
>gi|239508863 PREDICTED: similar to SLC29A4 protein [Homo sapiens]
Length = 307
Score = 380 bits (975), Expect = e-106
Identities = 183/184 (99%), Positives = 183/184 (99%)
Query: 7 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 66
LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL
Sbjct: 58 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 117
Query: 67 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWRLLSRDG 126
AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWRLLSRDG
Sbjct: 118 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWRLLSRDG 177
Query: 127 RNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSRERPIPS 186
RNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSRERPIPS
Sbjct: 178 RNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSRERPIPS 237
Query: 187 PSEE 190
PS E
Sbjct: 238 PSSE 241
>gi|239508835 PREDICTED: similar to SLC29A4 protein [Homo sapiens]
Length = 307
Score = 380 bits (975), Expect = e-106
Identities = 183/184 (99%), Positives = 183/184 (99%)
Query: 7 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 66
LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL
Sbjct: 58 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 117
Query: 67 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWRLLSRDG 126
AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWRLLSRDG
Sbjct: 118 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQWRLLSRDG 177
Query: 127 RNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSRERPIPS 186
RNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSRERPIPS
Sbjct: 178 RNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGDKAKEQQQSRERPIPS 237
Query: 187 PSEE 190
PS E
Sbjct: 238 PSSE 241
>gi|239752639 PREDICTED: hypothetical protein XP_002347643 [Homo
sapiens]
Length = 129
Score = 245 bits (626), Expect = 1e-65
Identities = 118/118 (100%), Positives = 118/118 (100%)
Query: 1 MDSGHALEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLT 60
MDSGHALEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLT
Sbjct: 1 MDSGHALEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLT 60
Query: 61 YILVALAAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ 118
YILVALAAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ
Sbjct: 61 YILVALAAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ 118
>gi|100913034 solute carrier family 29 (nucleoside transporters),
member 4 [Homo sapiens]
Length = 530
Score = 160 bits (404), Expect = 8e-40
Identities = 78/81 (96%), Positives = 81/81 (100%)
Query: 7 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 66
L+EPVP+DRYHAIYFAMLL+GVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL
Sbjct: 58 LDEPVPDDRYHAIYFAMLLAGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 117
Query: 67 AAVLLNNVLVERLTLHTRITA 87
AAVLLNNVLVERLTLHTRITA
Sbjct: 118 AAVLLNNVLVERLTLHTRITA 138
>gi|100913032 solute carrier family 29 (nucleoside transporters),
member 4 [Homo sapiens]
Length = 530
Score = 160 bits (404), Expect = 8e-40
Identities = 78/81 (96%), Positives = 81/81 (100%)
Query: 7 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 66
L+EPVP+DRYHAIYFAMLL+GVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL
Sbjct: 58 LDEPVPDDRYHAIYFAMLLAGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 117
Query: 67 AAVLLNNVLVERLTLHTRITA 87
AAVLLNNVLVERLTLHTRITA
Sbjct: 118 AAVLLNNVLVERLTLHTRITA 138
>gi|148596922 solute carrier family 29 (nucleoside transporters),
member 3 [Homo sapiens]
Length = 475
Score = 40.4 bits (93), Expect = 0.001
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 12 PNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKY-----------PGTSIVFDMSLT 60
P DR+ Y G+G LLP+N FIT +Y K P S + + +
Sbjct: 46 PEDRFCGTYIIFFSLGIGSLLPWNFFITAKEYWMFKLRNSSSPATGEDPEGSDILNYFES 105
Query: 61 YILVA-----LAAVLLNNVLVERLTLHTRITAT 88
Y+ VA + ++ N +LV R+ +H R+ A+
Sbjct: 106 YLAVASTVPSMLCLVANFLLVNRVAVHIRVLAS 138
>gi|38708299 solute carrier family 29 (nucleoside transporters),
member 2 [Homo sapiens]
Length = 456
Score = 37.4 bits (85), Expect = 0.008
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 12 PNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPG 50
P D YH + + + G+G LLP+N FIT + Y + G
Sbjct: 7 PRDSYHLVGISFFILGLGTLLPWNFFITAIPYFQARLAG 45
>gi|118582267 equilibrative nucleoside transporter 1 [Homo
sapiens]
Length = 456
Score = 36.2 bits (82), Expect = 0.018
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 12 PNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHK 47
P DRY A++ + G+G LLP+N F+T Y ++
Sbjct: 7 PQDRYKAVWLIFFMLGLGTLLPWNFFMTATQYFTNR 42
>gi|118582265 equilibrative nucleoside transporter 1 [Homo
sapiens]
Length = 456
Score = 36.2 bits (82), Expect = 0.018
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 12 PNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHK 47
P DRY A++ + G+G LLP+N F+T Y ++
Sbjct: 7 PQDRYKAVWLIFFMLGLGTLLPWNFFMTATQYFTNR 42
>gi|118582262 equilibrative nucleoside transporter 1 [Homo
sapiens]
Length = 456
Score = 36.2 bits (82), Expect = 0.018
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 12 PNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHK 47
P DRY A++ + G+G LLP+N F+T Y ++
Sbjct: 7 PQDRYKAVWLIFFMLGLGTLLPWNFFMTATQYFTNR 42
>gi|118582260 equilibrative nucleoside transporter 1 [Homo
sapiens]
Length = 456
Score = 36.2 bits (82), Expect = 0.018
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 12 PNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHK 47
P DRY A++ + G+G LLP+N F+T Y ++
Sbjct: 7 PQDRYKAVWLIFFMLGLGTLLPWNFFMTATQYFTNR 42
>gi|4826716 equilibrative nucleoside transporter 1 [Homo sapiens]
Length = 456
Score = 36.2 bits (82), Expect = 0.018
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 12 PNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHK 47
P DRY A++ + G+G LLP+N F+T Y ++
Sbjct: 7 PQDRYKAVWLIFFMLGLGTLLPWNFFMTATQYFTNR 42
>gi|117938310 sine oculis binding protein homolog [Homo sapiens]
Length = 873
Score = 30.8 bits (68), Expect = 0.75
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 114 PSAAQWRLLS--RDGRNAPSQTSEPSLYLHWDKTVFLERWPLSADVCSVLVGGPGKEAGD 171
PSAA+ R RDG +P +P P +A C+V+V G A +
Sbjct: 682 PSAAERRTCGGCRDGHCSPPAAGDPG--------PGAPAGPEAAAACNVIVNGTRGAAAE 733
Query: 172 KAKEQQQSRERPIPSP 187
AK + E+P P P
Sbjct: 734 GAKSAEPPPEQPPPPP 749
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 30.0 bits (66), Expect = 1.3
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 120 RLLSRDGRNAPSQTSEPSLYLHWDKTVFLERWPLSA-DVCSVLVGGPGKEA-------GD 171
RLLSR + ++ PS+ D T+ LER P SA VL P ++A D
Sbjct: 231 RLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPD 290
Query: 172 KAKEQQQSRERPIPSPS 188
K+ RER P P+
Sbjct: 291 FEKQPHSPRERLDPPPA 307
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 30.0 bits (66), Expect = 1.3
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 120 RLLSRDGRNAPSQTSEPSLYLHWDKTVFLERWPLSA-DVCSVLVGGPGKEA-------GD 171
RLLSR + ++ PS+ D T+ LER P SA VL P ++A D
Sbjct: 231 RLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQVLTAEPREDATPGEGRLPD 290
Query: 172 KAKEQQQSRERPIPSPS 188
K+ RER P P+
Sbjct: 291 FEKQPHSPRERLDPPPA 307
>gi|39653317 jumonji domain containing 2D [Homo sapiens]
Length = 523
Score = 28.9 bits (63), Expect = 2.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 96 SSLGTRPTPSTWLLWAPWPSAAQ 118
++LG R PS W +PWP AA+
Sbjct: 370 AALGLRQLPSHWARHSPWPMAAR 392
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 28.5 bits (62), Expect = 3.7
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 74 VLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSA 116
+L E T+ T + T T SS+LGT TP A P+A
Sbjct: 5169 ILTEPSTIATVMVPTGSTATASSTLGTAHTPKVVTTMATMPTA 5211
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 28.5 bits (62), Expect = 3.7
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 74 VLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSA 116
+L E T+ T + T T SS+LGT TP A P+A
Sbjct: 4850 ILTEPSTIATVMVPTGSTATASSTLGTAHTPKVVTTMATMPTA 4892
Score = 27.7 bits (60), Expect = 6.3
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 79 LTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSA 116
+T T ITAT T SS+ GT P P A P+A
Sbjct: 3951 ITTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAA 3988
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 28.5 bits (62), Expect = 3.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 102 PTPSTWLLWAPWPSAA 117
P PS W LWAPW + +
Sbjct: 2828 PVPSIWGLWAPWSTCS 2843
>gi|14165276 esophageal cancer related gene 4 protein [Homo sapiens]
Length = 148
Score = 28.1 bits (61), Expect = 4.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 160 VLVGGPGKEAGDKAKEQQQSRERPIPSPSE 189
+L GPG +G+K K Q RE P+P+ ++
Sbjct: 21 LLCWGPGGISGNKLKLMLQKREAPVPTKTK 50
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 28.1 bits (61), Expect = 4.8
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 152 PLSADVCSVLVGGPGKEAGDKAKEQQQSRERPIPSP--SEER 191
P ++ S G P E + +KE Q+S +R PSP EER
Sbjct: 983 PYLVELLSRRAGRPDPEPSEPSKEDQESSDRRPPSPPGPEER 1024
>gi|23943862 N-acetyltransferase 14 [Homo sapiens]
Length = 206
Score = 28.1 bits (61), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 154 SADVCSVLVGGPGKEAGDKAKEQQQSRER 182
S DVC VL PG AGD A+ + S R
Sbjct: 104 SGDVCGVLALAPGTNAGDGARVTRLSVSR 132
>gi|51093381 leptin receptor isoform 3 [Homo sapiens]
Length = 958
Score = 27.7 bits (60), Expect = 6.3
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 11 VPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVALAAVL 70
+P ++Y + + + GVG NSF D H G ++ + ++ ++ L +L
Sbjct: 802 IPIEKYQFSLYPIFMEGVGKPKIINSFTQDDIEKHQSDAGLYVIVPVIISSSILLLGTLL 861
Query: 71 LNNVLVERL 79
+++ +++L
Sbjct: 862 ISHQRMKKL 870
>gi|51093379 leptin receptor isoform 2 [Homo sapiens]
Length = 896
Score = 27.7 bits (60), Expect = 6.3
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 11 VPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVALAAVL 70
+P ++Y + + + GVG NSF D H G ++ + ++ ++ L +L
Sbjct: 802 IPIEKYQFSLYPIFMEGVGKPKIINSFTQDDIEKHQSDAGLYVIVPVIISSSILLLGTLL 861
Query: 71 LNNVLVERL 79
+++ +++L
Sbjct: 862 ISHQRMKKL 870
>gi|40254464 leptin receptor isoform 1 [Homo sapiens]
Length = 1165
Score = 27.7 bits (60), Expect = 6.3
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 11 VPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVALAAVL 70
+P ++Y + + + GVG NSF D H G ++ + ++ ++ L +L
Sbjct: 802 IPIEKYQFSLYPIFMEGVGKPKIINSFTQDDIEKHQSDAGLYVIVPVIISSSILLLGTLL 861
Query: 71 LNNVLVERL 79
+++ +++L
Sbjct: 862 ISHQRMKKL 870
>gi|171906567 peripheral benzodiazepine receptor-associated protein 1
isoform b [Homo sapiens]
Length = 1797
Score = 27.7 bits (60), Expect = 6.3
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 161 LVGGPGKEAGDKAKEQQQSRERPIPSPSEERSR 193
LVGG + G + E+ SR RP P P E SR
Sbjct: 1339 LVGGSSRRRGGGSPEKPPSRRRP-PDPREHCSR 1370
>gi|171906559 peripheral benzodiazepine receptor-associated protein 1
isoform a [Homo sapiens]
Length = 1857
Score = 27.7 bits (60), Expect = 6.3
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 161 LVGGPGKEAGDKAKEQQQSRERPIPSPSEERSR 193
LVGG + G + E+ SR RP P P E SR
Sbjct: 1399 LVGGSSRRRGGGSPEKPPSRRRP-PDPREHCSR 1430
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,602,161
Number of Sequences: 37866
Number of extensions: 400717
Number of successful extensions: 1297
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1214
Number of HSP's gapped (non-prelim): 92
length of query: 193
length of database: 18,247,518
effective HSP length: 97
effective length of query: 96
effective length of database: 14,574,516
effective search space: 1399153536
effective search space used: 1399153536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.