Guide to the Human Genome
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Name: SLC29A4 Sequence: fasta or formatted (530aa) NCBI GI: 100913034
Description:

solute carrier family 29 (nucleoside transporters), member 4

Referenced in:

Solute Carrier Families

Other entries for this name:
alt mRNA [530aa] solute carrier family 29 (nucleoside transporters), member 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         48           2
 C cysteine            2.1         11           1
 D aspartate           4.0         21           2
 E glutamate           3.2         17           2
 F phenylalanine       5.1         27           2
 G glycine             8.1         43           2
 H histidine           3.4         18           2
 I isoleucine          4.7         25           1
 K lysine              1.3          7           1
 L leucine            13.6         72           3
 M methionine          2.8         15           1
 N asparagine          1.7          9           2
 P proline             5.8         31           1
 Q glutamine           2.1         11           2
 R arginine            6.0         32           2
 S serine              7.4         39           2
 T threonine           6.0         32           2
 V valine              8.3         44           2
 W tryptophan          1.1          6           1
 Y tyrosine            4.2         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 29 (nucleoside transporters),... 
SLC29A4               1.000   solute carrier family 29 (nucleoside transporters),...
LOC402509             0.559   PREDICTED: similar to solute carrier family 29 (nuc...
LOC402509             0.559   PREDICTED: similar to solute carrier family 29 (nuc...
LOC100132308          0.552   PREDICTED: similar to solute carrier family 29 (nuc...
LOC100132308          0.552   PREDICTED: similar to solute carrier family 29 (nuc...
LOC402269             0.230   PREDICTED: similar to SLC29A4 protein 
LOC100287294          0.230   PREDICTED: hypothetical protein XP_002342767 
LOC402269             0.230   PREDICTED: similar to SLC29A4 protein 
LOC728500             0.230   PREDICTED: similar to SLC29A4 protein 
LOC100293842          0.129   PREDICTED: similar to SLC29A4 protein 
LOC100290340          0.129   PREDICTED: hypothetical protein XP_002347643 
SLC29A2               0.096   solute carrier family 29 (nucleoside transporters), ...
SLC29A3               0.090   solute carrier family 29 (nucleoside transporters),...
SLC29A1               0.081   equilibrative nucleoside transporter 1 
SLC29A1               0.081   equilibrative nucleoside transporter 1 
SLC29A1               0.081   equilibrative nucleoside transporter 1 
SLC29A1               0.081   equilibrative nucleoside transporter 1 
SLC29A1               0.081   equilibrative nucleoside transporter 1 
LOC100291422          0.062   PREDICTED: hypothetical protein XP_002346925 
LOC100292708          0.060   PREDICTED: hypothetical protein 
MARK2                 0.008   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.008   MAP/microtubule affinity-regulating kinase 2 isoform...
SLC22A3               0.006   solute carrier family 22 member 3 
SLC22A2               0.005   solute carrier family 22 member 2 
C2orf69               0.005   hypothetical protein LOC205327 
POU3F3                0.005   POU class 3 homeobox 3 
MARK2                 0.004   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.004   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.004   MAP/microtubule affinity-regulating kinase 2 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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