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Search of human proteins with 239754544
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754544 PREDICTED: hypothetical protein [Homo sapiens]
(201 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754544 PREDICTED: hypothetical protein [Homo sapiens] 423 e-119
gi|239749109 PREDICTED: hypothetical protein XP_002346915 [Homo ... 423 e-119
gi|239743138 PREDICTED: hypothetical protein XP_002342745 [Homo ... 423 e-119
gi|239508796 PREDICTED: hypothetical protein [Homo sapiens] 423 e-119
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 37 0.009
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 37 0.009
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 37 0.009
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 34 0.073
gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo ... 34 0.073
gi|239754220 PREDICTED: hypothetical protein XP_002345913 [Homo ... 33 0.16
gi|239748730 PREDICTED: hypothetical protein XP_002346792 [Homo ... 33 0.16
gi|239756839 PREDICTED: hypothetical protein [Homo sapiens] 33 0.21
gi|239740933 PREDICTED: hypothetical protein XP_002344111 [Homo ... 33 0.21
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 32 0.28
gi|40805852 thrombospondin type I domain-containing 1 isoform 2 ... 32 0.28
gi|8923894 thrombospondin type I domain-containing 1 isoform 1 [... 32 0.28
gi|45331215 leucine zipper, putative tumor suppressor 2 [Homo sa... 32 0.36
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 32 0.47
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 32 0.47
gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo ... 32 0.47
gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo ... 32 0.47
gi|239049540 FCH domain only 1 isoform c [Homo sapiens] 31 0.62
gi|239049457 FCH domain only 1 isoform b [Homo sapiens] 31 0.62
gi|29789054 FCH domain only 1 isoform b [Homo sapiens] 31 0.62
gi|239049440 FCH domain only 1 isoform a [Homo sapiens] 31 0.62
gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo ... 31 0.81
gi|19924099 synapsin I isoform Ia [Homo sapiens] 31 0.81
gi|19924097 synapsin I isoform Ib [Homo sapiens] 31 0.81
gi|239755027 PREDICTED: hypothetical protein [Homo sapiens] 30 1.1
>gi|239754544 PREDICTED: hypothetical protein [Homo sapiens]
Length = 201
Score = 423 bits (1088), Expect = e-119
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60
MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN
Sbjct: 1 MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60
Query: 61 MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ
Sbjct: 61 MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
Query: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180
MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL
Sbjct: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180
Query: 181 PHRGRGARARPPEAFGLAWEP 201
PHRGRGARARPPEAFGLAWEP
Sbjct: 181 PHRGRGARARPPEAFGLAWEP 201
>gi|239749109 PREDICTED: hypothetical protein XP_002346915 [Homo
sapiens]
Length = 201
Score = 423 bits (1088), Expect = e-119
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60
MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN
Sbjct: 1 MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60
Query: 61 MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ
Sbjct: 61 MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
Query: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180
MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL
Sbjct: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180
Query: 181 PHRGRGARARPPEAFGLAWEP 201
PHRGRGARARPPEAFGLAWEP
Sbjct: 181 PHRGRGARARPPEAFGLAWEP 201
>gi|239743138 PREDICTED: hypothetical protein XP_002342745 [Homo
sapiens]
Length = 201
Score = 423 bits (1088), Expect = e-119
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60
MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN
Sbjct: 1 MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60
Query: 61 MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ
Sbjct: 61 MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
Query: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180
MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL
Sbjct: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180
Query: 181 PHRGRGARARPPEAFGLAWEP 201
PHRGRGARARPPEAFGLAWEP
Sbjct: 181 PHRGRGARARPPEAFGLAWEP 201
>gi|239508796 PREDICTED: hypothetical protein [Homo sapiens]
Length = 201
Score = 423 bits (1088), Expect = e-119
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60
MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN
Sbjct: 1 MPLSGFLPWAGQVFLAFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPN 60
Query: 61 MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ
Sbjct: 61 MSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
Query: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180
MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL
Sbjct: 121 MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKLGL 180
Query: 181 PHRGRGARARPPEAFGLAWEP 201
PHRGRGARARPPEAFGLAWEP
Sbjct: 181 PHRGRGARARPPEAFGLAWEP 201
>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 38.9 bits (89), Expect = 0.003
Identities = 27/60 (45%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 102 SWVPMPGGPQLSP-GGGVGQ--MPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCR 158
SW G +P GGG GQ P P R + PP RQ R GPA P R AAAW R
Sbjct: 7 SWGDQAGERARAPSGGGSGQAQRPGPGRGSWRRPPRRQ---RPGPAAPSPPARGAAAWGR 63
Score = 33.1 bits (74), Expect = 0.16
Identities = 24/58 (41%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 102 SWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRG 159
+W GGP GG G +P RR EP GR +G +P G RRAAAW G
Sbjct: 60 AWGRSGGGPAAQSGGDGGGLP---RRAGAEPGGRGG--GSGGTMPGG--RRAAAWLTG 110
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 37.4 bits (85), Expect = 0.009
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 20/130 (15%)
Query: 78 TVSYFSQESGSTSADYTKTNNTEGSWVP--------MPGGPQLSP-GGGVGQMPS----- 123
T+S SGSTS+ ++N + + P +PGGP SP G VG S
Sbjct: 637 TLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPI 696
Query: 124 -----PLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKL 178
P + P+PPG Q + PA+ + M + + G + + Q T P +
Sbjct: 697 SPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSM 756
Query: 179 GLPHRGRGAR 188
PH G +
Sbjct: 757 S-PHPSPGGQ 765
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 37.4 bits (85), Expect = 0.009
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 20/130 (15%)
Query: 78 TVSYFSQESGSTSADYTKTNNTEGSWVP--------MPGGPQLSP-GGGVGQMPS----- 123
T+S SGSTS+ ++N + + P +PGGP SP G VG S
Sbjct: 624 TLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPI 683
Query: 124 -----PLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKL 178
P + P+PPG Q + PA+ + M + + G + + Q T P +
Sbjct: 684 SPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSM 743
Query: 179 GLPHRGRGAR 188
PH G +
Sbjct: 744 S-PHPSPGGQ 752
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 37.4 bits (85), Expect = 0.009
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 20/130 (15%)
Query: 78 TVSYFSQESGSTSADYTKTNNTEGSWVP--------MPGGPQLSP-GGGVGQMPS----- 123
T+S SGSTS+ ++N + + P +PGGP SP G VG S
Sbjct: 624 TLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPI 683
Query: 124 -----PLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLRRWFTRPKL 178
P + P+PPG Q + PA+ + M + + G + + Q T P +
Sbjct: 684 SPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSM 743
Query: 179 GLPHRGRGAR 188
PH G +
Sbjct: 744 S-PHPSPGGQ 752
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 34.3 bits (77), Expect = 0.073
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 15/86 (17%)
Query: 100 EGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRG 159
E S P PG P+ G G+ P P RR+ P G++ A A PR +R+ A C
Sbjct: 94 EASPGPAPGAPRAR--GSCGREPGPRRRRAPSSAGKRPAAAARAAPPR---QRSLARCLP 148
Query: 160 ARLGVLVGQLRRWFTRPKLG--LPHR 183
+G V RP +G LP R
Sbjct: 149 RSVGSCV--------RPSVGPSLPRR 166
>gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo
sapiens]
Length = 230
Score = 34.3 bits (77), Expect = 0.073
Identities = 32/92 (34%), Positives = 38/92 (41%), Gaps = 13/92 (14%)
Query: 107 PGGPQLSPGGGVGQMPSPLRRQFPEPPGRQVV------LRAGPAVPRGSMRRAAAW---C 157
PG P L P G P LR + G +V L GP P G R A W
Sbjct: 67 PGSPPLPPSAGPAPPPG-LREAWVGGGGGRVSPAPGAGLTRGPLAPLGRRRHAPRWEPAA 125
Query: 158 RGARLGVLVGQLRRWFTRPKLGLPHRGRGARA 189
GA LG +V +R +R + G GRGA A
Sbjct: 126 AGALLGPMVALSQRDCSRDRDG---AGRGAPA 154
>gi|239754220 PREDICTED: hypothetical protein XP_002345913 [Homo
sapiens]
Length = 117
Score = 33.1 bits (74), Expect = 0.16
Identities = 27/63 (42%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Query: 100 EGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRG 159
EG+ GGP SPG P R P G QV L G AVP R AAWCR
Sbjct: 26 EGTQAQGEGGP--SPGRTARSQAGPASRI--SPAGLQV-LSEGAAVPHSG--RDAAWCRD 78
Query: 160 ARL 162
A L
Sbjct: 79 AHL 81
>gi|239748730 PREDICTED: hypothetical protein XP_002346792 [Homo
sapiens]
Length = 117
Score = 33.1 bits (74), Expect = 0.16
Identities = 27/63 (42%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Query: 100 EGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPPGRQVVLRAGPAVPRGSMRRAAAWCRG 159
EG+ GGP SPG P R P G QV L G AVP R AAWCR
Sbjct: 26 EGTQAQGEGGP--SPGRTARSQAGPASRI--SPAGLQV-LSEGAAVPHSG--RDAAWCRD 78
Query: 160 ARL 162
A L
Sbjct: 79 AHL 81
>gi|239756839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 743
Score = 32.7 bits (73), Expect = 0.21
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 12/101 (11%)
Query: 99 TEGSWVPMPGGPQLSPGGGVGQMPSPLR----RQFPEPPGRQVVLRAGPAVPRGSMRRAA 154
T W GG + GG GQ+ LR R+ P+ R A+ RG+ R A
Sbjct: 534 THPGWHSEAGGRR---DGGAGQVVQGLRGPHGRRGPQVQAGWQAGRQAAALGRGAALRRA 590
Query: 155 AWCRGARLGVLVGQL-----RRWFTRPKLGLPHRGRGARAR 190
A G+ G+L G + RR +G RGRGAR R
Sbjct: 591 AQGAGSASGLLGGAVGARGRRRAHKPVVVGERLRGRGARVR 631
>gi|239740933 PREDICTED: hypothetical protein XP_002344111 [Homo
sapiens]
Length = 697
Score = 32.7 bits (73), Expect = 0.21
Identities = 33/101 (32%), Positives = 43/101 (42%), Gaps = 12/101 (11%)
Query: 99 TEGSWVPMPGGPQLSPGGGVGQMPSPLR----RQFPEPPGRQVVLRAGPAVPRGSMRRAA 154
T W GG + GG GQ+ LR R+ P+ R A+ RG+ R A
Sbjct: 488 THPGWHSEAGGRR---DGGAGQVVQGLRGPHGRRGPQVQAGWQAGRQAAALGRGAALRRA 544
Query: 155 AWCRGARLGVLVGQL-----RRWFTRPKLGLPHRGRGARAR 190
A G+ G+L G + RR +G RGRGAR R
Sbjct: 545 AQGAGSASGLLGGAVGARGRRRAHKPVVVGERLRGRGARVR 585
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 32.3 bits (72), Expect = 0.28
Identities = 26/95 (27%), Positives = 34/95 (35%), Gaps = 8/95 (8%)
Query: 57 PSPNMSPFFDLQIDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSW-VPMPGG------ 109
P + P F LQ D + F + SQ+ SA Y N + P G
Sbjct: 1664 PCGALQPGFPLQHDGERDPFTCPGFASQDKALGSAQYEDPRNLHSAGRSSSPAGETEGDR 1723
Query: 110 -PQLSPGGGVGQMPSPLRRQFPEPPGRQVVLRAGP 143
PQ PG G +P P ++ P Q GP
Sbjct: 1724 EPQARPGEGTAPLPPPGQKVGGSQPPFQGQREPGP 1758
>gi|40805852 thrombospondin type I domain-containing 1 isoform 2
[Homo sapiens]
Length = 799
Score = 32.3 bits (72), Expect = 0.28
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 19/125 (15%)
Query: 16 AFIPVNPKP-------SSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPNMSPFFDLQ 68
AF P +P P S ++ + +S C +A+ + +LW FG P+ +P
Sbjct: 341 AFQPSSPSPLQPQGPVKSNNIVTVTGISLCLFIIIATVLITLWRRFGRPAKCSTPARHNS 400
Query: 69 IDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQ 128
I S S + + + GS+ GP SPG +P RR
Sbjct: 401 IHSP----------SFRKNSDEENICELSEQRGSFSDGGDGPTGSPGD--TGIPLTYRRS 448
Query: 129 FPEPP 133
P PP
Sbjct: 449 GPVPP 453
>gi|8923894 thrombospondin type I domain-containing 1 isoform 1
[Homo sapiens]
Length = 852
Score = 32.3 bits (72), Expect = 0.28
Identities = 31/125 (24%), Positives = 47/125 (37%), Gaps = 19/125 (15%)
Query: 16 AFIPVNPKP-------SSVGVMAIMSMSQCCRDFMASFVASLWPDFGGPSPNMSPFFDLQ 68
AF P +P P S ++ + +S C +A+ + +LW FG P+ +P
Sbjct: 394 AFQPSSPSPLQPQGPVKSNNIVTVTGISLCLFIIIATVLITLWRRFGRPAKCSTPARHNS 453
Query: 69 IDKSKRSFVTVSYFSQESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQ 128
I S S + + + GS+ GP SPG +P RR
Sbjct: 454 IHSP----------SFRKNSDEENICELSEQRGSFSDGGDGPTGSPGD--TGIPLTYRRS 501
Query: 129 FPEPP 133
P PP
Sbjct: 502 GPVPP 506
>gi|45331215 leucine zipper, putative tumor suppressor 2 [Homo
sapiens]
Length = 669
Score = 32.0 bits (71), Expect = 0.36
Identities = 41/142 (28%), Positives = 55/142 (38%), Gaps = 10/142 (7%)
Query: 16 AFIPVNPKPSSVGVMAIMSMSQCCRDFMASFVASLWPDFGGP-----SPNMSPFFDLQID 70
AF PV PKP G ++ S ++ SL FGGP S + S D +
Sbjct: 147 AFKPVLPKPR--GAPSLPSFMGPRATGLSGSQGSLTQLFGGPASSSSSSSSSSAADKPLA 204
Query: 71 KSKRSFVTVSYFSQESGSTSADYTKTNNTEGS--WVPMPGGPQLSPGGGVGQMPSPLRRQ 128
S + S +SG S T +T G+ PGG S G G G +P P R
Sbjct: 205 FSGWASGCPSGTLSDSGRNSLSSLPTYSTGGAEPTTSSPGGHLPSHGSGRGALPGP-ARG 263
Query: 129 FPEPPGRQVVLRAGPAVPRGSM 150
P P R+ + GS+
Sbjct: 264 VPTGPSHSDSGRSSSSKSTGSL 285
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 31.6 bits (70), Expect = 0.47
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 105 PMPGGPQLSPG----GGVGQMPSPLRRQFPEPPGRQVVLRAGPAVPRG 148
P+PGGP + P GG G P P P PP + A P +P G
Sbjct: 710 PLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFG 757
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 31.6 bits (70), Expect = 0.47
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Query: 105 PMPGGPQLSPG----GGVGQMPSPLRRQFPEPPGRQVVLRAGPAVPRG 148
P+PGGP + P GG G P P P PP + A P +P G
Sbjct: 719 PLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFG 766
>gi|239749835 PREDICTED: hypothetical protein XP_002347183 [Homo
sapiens]
Length = 321
Score = 31.6 bits (70), Expect = 0.47
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 112 LSPGGGVGQMPSPLRRQF-PEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLR 170
LS G G+ P R+ P+P R+ P P GS R+A R AR L G R
Sbjct: 249 LSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGRRDARGAALGGAFR 308
>gi|239744125 PREDICTED: hypothetical protein XP_002343039 [Homo
sapiens]
Length = 321
Score = 31.6 bits (70), Expect = 0.47
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 112 LSPGGGVGQMPSPLRRQF-PEPPGRQVVLRAGPAVPRGSMRRAAAWCRGARLGVLVGQLR 170
LS G G+ P R+ P+P R+ P P GS R+A R AR L G R
Sbjct: 249 LSCGPSWGEDSGPRHRELRPDPDSRRASAERSPRCPPGSPRKAGPGRRDARGAALGGAFR 308
>gi|239049540 FCH domain only 1 isoform c [Homo sapiens]
Length = 839
Score = 31.2 bits (69), Expect = 0.62
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 84 QESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPP 133
++SG S + + SWVP PG PQ P + P P R PP
Sbjct: 423 EDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPS---CRAPPPEARGIRAPP 469
>gi|239049457 FCH domain only 1 isoform b [Homo sapiens]
Length = 889
Score = 31.2 bits (69), Expect = 0.62
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 84 QESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPP 133
++SG S + + SWVP PG PQ P + P P R PP
Sbjct: 473 EDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPS---CRAPPPEARGIRAPP 519
>gi|29789054 FCH domain only 1 isoform b [Homo sapiens]
Length = 889
Score = 31.2 bits (69), Expect = 0.62
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 84 QESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPP 133
++SG S + + SWVP PG PQ P + P P R PP
Sbjct: 473 EDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPS---CRAPPPEARGIRAPP 519
>gi|239049440 FCH domain only 1 isoform a [Homo sapiens]
Length = 891
Score = 31.2 bits (69), Expect = 0.62
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 84 QESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPP 133
++SG S + + SWVP PG PQ P + P P R PP
Sbjct: 473 EDSGLDSPSHAAPGPSPDSWVPRPGTPQSPPS---CRAPPPEARGIRAPP 519
>gi|239751352 PREDICTED: hypothetical protein XP_002347815 [Homo
sapiens]
Length = 697
Score = 30.8 bits (68), Expect = 0.81
Identities = 32/99 (32%), Positives = 42/99 (42%), Gaps = 12/99 (12%)
Query: 99 TEGSWVPMPGGPQLSPGGGVGQMPSPLR----RQFPEPPGRQVVLRAGPAVPRGSMRRAA 154
T W GG + GG GQ+ LR R+ P+ R A+ RG+ R A
Sbjct: 488 THPGWHSEAGGRR---DGGAGQVVQGLRGPHGRRGPQVQAGWQAGRQAAALGRGAALRRA 544
Query: 155 AWCRGARLGVLVGQL-----RRWFTRPKLGLPHRGRGAR 188
A G+ G+L G + RR +G RGRGAR
Sbjct: 545 AQGAGSASGLLGGAVGARGRRRAHKPVVVGERLRGRGAR 583
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 30.8 bits (68), Expect = 0.81
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 84 QESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPPGRQVVLRAGP 143
Q+ S +A T+ + P+ GGP P PSP R+ P RQ + +GP
Sbjct: 516 QQPASQAAPPTQGQGRQSR--PVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSV-SGP 572
Query: 144 AVPRGS 149
A P+ S
Sbjct: 573 APPKAS 578
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 30.8 bits (68), Expect = 0.81
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 84 QESGSTSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQMPSPLRRQFPEPPGRQVVLRAGP 143
Q+ S +A T+ + P+ GGP P PSP R+ P RQ + +GP
Sbjct: 516 QQPASQAAPPTQGQGRQSR--PVAGGPGAPPAARPPASPSPQRQAGPPQATRQTSV-SGP 572
Query: 144 AVPRGS 149
A P+ S
Sbjct: 573 APPKAS 578
>gi|239755027 PREDICTED: hypothetical protein [Homo sapiens]
Length = 239
Score = 30.4 bits (67), Expect = 1.1
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 8/43 (18%)
Query: 157 CRGARLGVLVGQLRRW--------FTRPKLGLPHRGRGARARP 191
C GA+ G ++G+ RW + RP LG P G GA RP
Sbjct: 85 CVGAQGGDVLGKGTRWTLGRADGSWERPGLGTPRTGPGAERRP 127
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,034,880
Number of Sequences: 37866
Number of extensions: 568173
Number of successful extensions: 2296
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 2235
Number of HSP's gapped (non-prelim): 138
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.