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Search of human proteins with 119226260
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
(916 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 1951 0.0
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 105 1e-22
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 91 6e-18
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 87 5e-17
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 87 9e-17
gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens] 86 1e-16
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 86 1e-16
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens] 86 2e-16
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 86 2e-16
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 86 2e-16
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 86 2e-16
gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens] 85 3e-16
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 85 4e-16
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 84 6e-16
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 82 2e-15
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 82 2e-15
gi|9558733 transformer-2 alpha [Homo sapiens] 81 5e-15
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 80 9e-15
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 80 9e-15
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 79 2e-14
gi|86991440 splicing factor, arginine/serine-rich 5 [Homo sapiens] 79 2e-14
gi|86991438 splicing factor, arginine/serine-rich 5 [Homo sapiens] 79 2e-14
gi|50083281 KIAA1853 protein [Homo sapiens] 79 2e-14
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 77 7e-14
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 76 2e-13
gi|72534660 splicing factor, arginine/serine-rich 7 [Homo sapiens] 75 2e-13
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 75 3e-13
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 75 4e-13
gi|4827046 U2 small nuclear RNA auxiliary factor 1-like 2 [Homo ... 74 5e-13
gi|150417989 cyclin K isoform 1 [Homo sapiens] 74 5e-13
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 1951 bits (5055), Expect = 0.0
Identities = 916/916 (100%), Positives = 916/916 (100%)
Query: 1 MEMPLPPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGEFYSYYKCKL 60
MEMPLPPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGEFYSYYKCKL
Sbjct: 1 MEMPLPPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGEFYSYYKCKL 60
Query: 61 ALEQQQLICKQQTPELEPAATMPPLPQPPLAPAAPIPPAQGAPSMDELIQQSQWNLQQQE 120
ALEQQQLICKQQTPELEPAATMPPLPQPPLAPAAPIPPAQGAPSMDELIQQSQWNLQQQE
Sbjct: 61 ALEQQQLICKQQTPELEPAATMPPLPQPPLAPAAPIPPAQGAPSMDELIQQSQWNLQQQE 120
Query: 121 QHLLALRQEQVTAAVAHAVEQQMQKLLEETQLDMNEFDNLLQPIIDTCTKDAISAGKNWM 180
QHLLALRQEQVTAAVAHAVEQQMQKLLEETQLDMNEFDNLLQPIIDTCTKDAISAGKNWM
Sbjct: 121 QHLLALRQEQVTAAVAHAVEQQMQKLLEETQLDMNEFDNLLQPIIDTCTKDAISAGKNWM 180
Query: 181 FSNAKSPPHCELMAGHLRNRITADGAHFELRLHLIYLINDVLHHCQRKQARELLAALQKV 240
FSNAKSPPHCELMAGHLRNRITADGAHFELRLHLIYLINDVLHHCQRKQARELLAALQKV
Sbjct: 181 FSNAKSPPHCELMAGHLRNRITADGAHFELRLHLIYLINDVLHHCQRKQARELLAALQKV 240
Query: 241 VVPIYCTSFLAVEEDKQQKIARLLQLWEKNGYFDDSIIQQLQSPALGLGQYQATLINEYS 300
VVPIYCTSFLAVEEDKQQKIARLLQLWEKNGYFDDSIIQQLQSPALGLGQYQATLINEYS
Sbjct: 241 VVPIYCTSFLAVEEDKQQKIARLLQLWEKNGYFDDSIIQQLQSPALGLGQYQATLINEYS 300
Query: 301 SVVQPVQLAFQQQIQTLKTQHEEFVTSLAQQQQQQQQQQQQLQMPQMEAEVKATPPPPAP 360
SVVQPVQLAFQQQIQTLKTQHEEFVTSLAQQQQQQQQQQQQLQMPQMEAEVKATPPPPAP
Sbjct: 301 SVVQPVQLAFQQQIQTLKTQHEEFVTSLAQQQQQQQQQQQQLQMPQMEAEVKATPPPPAP 360
Query: 361 PPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPHDQIPPNKPP 420
PPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPHDQIPPNKPP
Sbjct: 361 PPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPHDQIPPNKPP 420
Query: 421 WFDQPHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWNNSHEGMWGEQRGDPGWNGQRDAPW 480
WFDQPHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWNNSHEGMWGEQRGDPGWNGQRDAPW
Sbjct: 421 WFDQPHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWNNSHEGMWGEQRGDPGWNGQRDAPW 480
Query: 481 NNQPDAAWNSQFEGPWNSQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQPPH 540
NNQPDAAWNSQFEGPWNSQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQPPH
Sbjct: 481 NNQPDAAWNSQFEGPWNSQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQPPH 540
Query: 541 PHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPAEMGPPHHHPGHRMPHPGINE 600
PHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPAEMGPPHHHPGHRMPHPGINE
Sbjct: 541 PHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPAEMGPPHHHPGHRMPHPGINE 600
Query: 601 HPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPPHINHDDPSLVPNVPYFDLPAGLMAPLVK 660
HPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPPHINHDDPSLVPNVPYFDLPAGLMAPLVK
Sbjct: 601 HPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPPHINHDDPSLVPNVPYFDLPAGLMAPLVK 660
Query: 661 LEDHEYKPLDPKDIRLPPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAK 720
LEDHEYKPLDPKDIRLPPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAK
Sbjct: 661 LEDHEYKPLDPKDIRLPPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAK 720
Query: 721 MRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSR 780
MRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSR
Sbjct: 721 MRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSR 780
Query: 781 SRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSRLG 840
SRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSRLG
Sbjct: 781 SRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSRLG 840
Query: 841 EENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKWDQYKGVGVALDDPYENYRRN 900
EENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKWDQYKGVGVALDDPYENYRRN
Sbjct: 841 EENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKWDQYKGVGVALDDPYENYRRN 900
Query: 901 KSYSFIARMKARDECK 916
KSYSFIARMKARDECK
Sbjct: 901 KSYSFIARMKARDECK 916
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 105 bits (263), Expect = 1e-22
Identities = 146/545 (26%), Positives = 206/545 (37%), Gaps = 103/545 (18%)
Query: 358 PAPPPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPG--GVQDPAAAGPRGPGP---HD 412
P P AP PP + S+PP Q A G G+ P GPRGP P +
Sbjct: 1725 PQARPGEGTAPLPPPGQKVGGSQPPFQGQREPGPHALGMSGLHGPNFPGPRGPAPPFPEE 1784
Query: 413 QIPPNKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWNNSHEGMWG-------- 464
I N P + P A +G Q+ P + G PP+ S + G
Sbjct: 1785 NIASNDGP---RGPPPARFGAQKGPIPSLFSGQHGPPPYGDSRGPSPSYLGGPRGVAPSQ 1841
Query: 465 -EQRGDPGWNGQ--RDAPWNNQPDAAWNSQFEGPWNSQHEQPPWGGGQREPPFRMQRPPH 521
E+R DP + +DAP+N A +QFEG EQ P+ G + PF+
Sbjct: 1842 FEERKDPHGEKREFQDAPYNEVTGAP--AQFEGT-----EQAPFLGSRGGAPFQFGGQ-- 1892
Query: 522 FRGPFPPHQQHPQFNQPPHPHNFNRFPP--RFMQDDFPPRHPFE--RPPYPHRFDYPQGD 577
R P + P+ PP R PP F+ P FE R P+P++F+ P+G
Sbjct: 1893 -RRPLLSQLKGPRGGPPPSQFGGQRGPPPGHFVGPRGPHPSQFETARGPHPNQFEGPRGQ 1951
Query: 578 FPAEMGPPHHHPGHRMPHPGINEHPPWAGPQHP---DFGPPPHGFNGQPPHMRR--QGPP 632
P M P + ++ P + + P FG G G P + Q P
Sbjct: 1952 APNFMPGPRGIQPQQFEDQRVHSPPRFTNQRAPAPLQFG----GLRGSAPFSEKNEQTPS 2007
Query: 633 --HINHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAV 690
H P ++ P PL++L H P KD R PPS +A
Sbjct: 2008 RFHFQGQAPQVMKPGP---------RPLLELPSHP--PQHRKD-RWEEAGPPSALSSSAP 2055
Query: 691 EAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKG-----QEKRNSGP------SRS 739
P D S + + +E+ R+R+ +EK P S
Sbjct: 2056 G---QGPEADGQWASADFREGKGHEYRNQTFEGRQRERFDVGPKEKPLEEPDAQGRASED 2112
Query: 740 RSRSKSRGRSSSRSNS----------RSSKSSGSYSRSRSRSCSRS----------YSRS 779
R R + RGR+ SR R SS + R+R RS +R + RS
Sbjct: 2113 RRRERERGRNWSRERDWDRPREWDRHRDKDSSRDWDRNRERSANRDREREADRGKEWDRS 2172
Query: 780 RSRSRSRSRS-------SRSRSRSQSRSRSKSYSPGRRRRSRSRS------PTPPSSAGL 826
R RSR+R R RSRSR + R +++ GR R+ RS+S P P +S
Sbjct: 2173 RERSRNRERERDRRRDRDRSRSRERDRDKARDRERGRDRKDRSKSKESARDPKPEASRAS 2232
Query: 827 GSNSA 831
+ +A
Sbjct: 2233 DAGTA 2237
Score = 33.5 bits (75), Expect = 0.93
Identities = 41/191 (21%), Positives = 68/191 (35%), Gaps = 17/191 (8%)
Query: 334 QQQQQQQQLQMPQMEAEVKATPPPPAPPPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEA 393
Q +++ + + +A V TPP PPP P P P P KP P ++ A
Sbjct: 1236 QSEKKPSKYPLCSADAAVSTTPPGSPPPPPPLPEP--PVLKVLSSLKPAAPSPATAATTA 1293
Query: 394 PG---GVQDPAAAGPRGPGPHDQIPP---NKPPWFDQPHPVAPWGQQQPPEQPPYPHHQG 447
A++ + P + I K FD P P++P G
Sbjct: 1294 AAASTAASSTASSASKTASPLEHILQTLFGKKKSFDPSAREPPGSTAGLPQEPKTTAEDG 1353
Query: 448 GPPHCPPWNNSHEGMWGEQRGDPGWNGQR-DAPWNNQ----PDAAWNSQF--EGPWNSQH 500
P PP + +G+ D + D P++ + P+ A+++Q G +
Sbjct: 1354 VP--APPLLDPIVQQFGQFSKDKALEEEEDDRPYDPEEEYDPERAFDTQLVERGRRHEVE 1411
Query: 501 EQPPWGGGQRE 511
P +RE
Sbjct: 1412 RAPEAAAAERE 1422
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 90.5 bits (223), Expect = 6e-18
Identities = 97/362 (26%), Positives = 126/362 (34%), Gaps = 69/362 (19%)
Query: 344 MPQMEAEVKATPPPPAPPPA---------PAPAPAIPPTTQPDDSKPPIQMPGSSEYEAP 394
+P V PPPP PPP P P + P P PP M + E P
Sbjct: 309 LPTQPPVVPQAPPPPPPPPQQQPIRSLFQPQPLQPLLPVQHPHHPSPPQGMHMPPQLETP 368
Query: 395 GGVQDPAAAGPRGP-----GPHDQ---IPPNKPPWF---DQPHPVAPWGQQQPPEQPPYP 443
+ P P+ P PH + + P + P QP P G Q+ P P +P
Sbjct: 369 RMMMTPPPVTPQQPKNIHINPHFKGTVVTPVQVPLLPVPSQPRPAV--GPQRFPGPPEFP 426
Query: 444 HHQGGPP----------------HCPPWNNSHEGMWGEQRGDPGWNG-----QRDAPWNN 482
H GP PP + + G+P + QR P
Sbjct: 427 QHTPGPVPNSFSQPPRLPLQDQWRAPPPPQDRDPFFLGVSGEPRFPSHLFLEQRSPPPPP 486
Query: 483 QPDAAWNSQFEGPWNSQ----HEQPPWGGGQREPPFRMQRP--PHFRGPFPPHQQHPQFN 536
P NS P S P + ++P F +RP P + P P H F+
Sbjct: 487 PPPTLLNSSHPVPTQSPLPFTQPGPAFNQQGQQPVFPRERPVRPALQPPGPVGILH--FS 544
Query: 537 QPPHPHNFNRFPPR--FMQ---DDFPPRH-------PFERP-PYPHRFDYPQGDFPAEMG 583
QP PPR F+ F P H P P P PH+ PQ P +
Sbjct: 545 QPGSATTRPFIPPRQPFLPGPGQPFLPTHTQPNLQGPLHPPLPPPHQ---PQPQQPQQQP 601
Query: 584 PPHHHPGHRMPHPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPPHINHDDPSLVP 643
PP H P H+ PH +H P PQHP PP H + H+ PP + P P
Sbjct: 602 PPQHQPPHQPPHQPPPQHQP--PPQHPPQHPPQHQHHHHHHHLSVPPPPLMPMSQPQFRP 659
Query: 644 NV 645
+V
Sbjct: 660 HV 661
Score = 65.5 bits (158), Expect = 2e-10
Identities = 101/393 (25%), Positives = 127/393 (32%), Gaps = 111/393 (28%)
Query: 304 QPVQLAFQQQI--QTLKTQHEEFVTSLAQQQQQQQQQQQQLQMPQMEAEVKATPPPPAPP 361
QP++ FQ Q L QH + Q QL+ P+M TPPP P
Sbjct: 330 QPIRSLFQPQPLQPLLPVQHPHHPSP-----PQGMHMPPQLETPRM----MMTPPPVTPQ 380
Query: 362 P---------------APAPAPAIPPTTQPDDSKPPIQMPGSSEY--EAPGGVQDPAAAG 404
P P +P +QP + P + PG E+ PG V + +
Sbjct: 381 QPKNIHINPHFKGTVVTPVQVPLLPVPSQPRPAVGPQRFPGPPEFPQHTPGPVPNSFSQP 440
Query: 405 PRGPGPHDQIPPNKPPWFDQPHPVAPWGQQQPPEQPPYPHH----QGGPPHCPP----WN 456
PR P DQ PP P + G+ P +P H Q PP PP N
Sbjct: 441 PRLP-LQDQWRAPPPPQDRDPFFLGVSGE------PRFPSHLFLEQRSPPPPPPPPTLLN 493
Query: 457 NSH----EGMWGEQRGDPGWNGQRDAP---------------------WNNQPDAAWNSQ 491
+SH + + P +N Q P +QP +A
Sbjct: 494 SSHPVPTQSPLPFTQPGPAFNQQGQQPVFPRERPVRPALQPPGPVGILHFSQPGSATTRP 553
Query: 492 F-----------EGPWNSQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQPPH 540
F P+ H QP G P PPH P P QQ P +QPPH
Sbjct: 554 FIPPRQPFLPGPGQPFLPTHTQPNLQGPLHPP----LPPPHQPQPQQPQQQPPPQHQPPH 609
Query: 541 --PHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPAEMGPPHHHPGHRMPHPGI 598
PH PP Q PP+HP + PP HHH H + P
Sbjct: 610 QPPHQ----PP--PQHQPPPQHPPQHPPQHQ----------------HHHHHHHLSVP-- 645
Query: 599 NEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGP 631
PP P F P Q R Q P
Sbjct: 646 --PPPLMPMSQPQFRPHVQTAQPQASSSRMQCP 676
Score = 42.7 bits (99), Expect = 0.002
Identities = 52/196 (26%), Positives = 72/196 (36%), Gaps = 34/196 (17%)
Query: 314 IQTLKTQHEEFVTSLAQQQQQQQQQQ--QQLQMPQMEAEVKATPPPPAPP--PAPAPAPA 369
I ++ + FV S A Q Q QQ + + L+ + + + P P PA PA
Sbjct: 883 ISNVQPKTSNFVPSSANMQYQGQQMKALKHLRQTRTVPQSQTQPLHKVLPIKPADVEEPA 942
Query: 370 IPPTTQ-------PDDSKPPIQMPGSSEYEAPGGVQDPAAAGPR------GPGPHDQI-- 414
+P T + P D+KP ++ + + GG ++ R G G D
Sbjct: 943 VPQTPRVASIQGRPQDTKPGVKRTVTHRTNSGGGDGPHISSKVRVIKLSGGGGESDGFFH 1002
Query: 415 PPNKPPWFDQPHPVAPW----------GQQQPPEQPPYPH-HQGGPPHCPPWNNSHEG-- 461
P +P QP V P G QQPP P PH H PP H
Sbjct: 1003 PEGQPQRLPQPPEVGPQPARKVTLTRGGLQQPPHLPAGPHAHSPVPPGIKSIQGIHPAKK 1062
Query: 462 --MWGEQRGDPGWNGQ 475
M G RG G G+
Sbjct: 1063 AIMHGRGRGVAGPMGR 1078
Score = 32.7 bits (73), Expect = 1.6
Identities = 26/95 (27%), Positives = 30/95 (31%), Gaps = 19/95 (20%)
Query: 330 QQQQQQQQQQQQLQMPQMEAEVKATPPPPAPPPAPAPAPAIPPTTQPDDS---------- 379
Q QQ QQQ Q Q P PP PPP P P PP P
Sbjct: 593 QPQQPQQQPPPQHQPPHQ--------PPHQPPPQHQPPPQHPPQHPPQHQHHHHHHHLSV 644
Query: 380 -KPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPHDQ 413
PP+ ++ P A+ R P Q
Sbjct: 645 PPPPLMPMSQPQFRPHVQTAQPQASSSRMQCPQRQ 679
Score = 30.4 bits (67), Expect = 7.9
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 310 FQQQIQTLKTQHEEFVTS--LAQQQQQQQQQQQQLQMPQMEAEVKATPPPPAPPPAPAPA 367
++ +I+ K EE + L +QQQ ++++ L+ + + PPPPA A +
Sbjct: 790 YRLKIEEQKRLREEILKQKELRRQQQAGARKKELLERLAQQQQQLYAPPPPAEQEEQALS 849
Query: 368 PAIPPTTQPDDSKPPIQMPGS 388
P+ P + P + PG+
Sbjct: 850 PS------PTNGNPLLPFPGA 864
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 87.4 bits (215), Expect = 5e-17
Identities = 61/122 (50%), Positives = 74/122 (60%), Gaps = 10/122 (8%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSR---SRSCSR 774
R+K R+ + R+S PS SRSRS+SR RSSS S SRS SS SRSR SRS SR
Sbjct: 203 RSKSRSSHSRSSS-RSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSR 261
Query: 775 SY---SRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSA 831
S+ S R RS S S SS R+R +SRSRS S ++RR+RSRS P S +G N+
Sbjct: 262 SHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRS---PESQVIGENTK 318
Query: 832 PP 833
P
Sbjct: 319 QP 320
Score = 65.5 bits (158), Expect = 2e-10
Identities = 54/105 (51%), Positives = 62/105 (59%), Gaps = 14/105 (13%)
Query: 729 QEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSR 788
+E N S RSRSKSR S SRS+SRSS S S SRSRSRS RS S S+SRSR
Sbjct: 190 EEDSNKKKSNRRSRSKSRS-SHSRSSSRSSSPSSSRSRSRSRS------RSSSSSQSRSR 242
Query: 789 SSRSRSRSQSRSR-SKSYSPGRRRRSRSRSPTPPSSAGLGSNSAP 832
SS SR +SRSR SKS S R R S +P + S+S+P
Sbjct: 243 SS---SRERSRSRGSKSRSSSRSHRG---SSSPRKRSYSSSSSSP 281
Score = 57.4 bits (137), Expect = 6e-08
Identities = 44/86 (51%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 750 SSRSNSRSSKSSGSYSRSRSRSC-SRSYSRSRSRSRSRSRS-SRSRSRSQSRSRSKSYSP 807
+S + K S SRS+SRS SRS SRS S S SRSRS SRSRS S S+SRS+S S
Sbjct: 187 ASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSS- 245
Query: 808 GRRRRSRSRSPTPPSSAGLGSNSAPP 833
R RSRSR SS+ S+ P
Sbjct: 246 --RERSRSRGSKSRSSSRSHRGSSSP 269
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 86.7 bits (213), Expect = 9e-17
Identities = 70/164 (42%), Positives = 88/164 (53%), Gaps = 33/164 (20%)
Query: 706 EGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRS----SSRSNSRSSKSS 761
+G E NG K+R K +R SRSRS S+SR RS SRS S SSKSS
Sbjct: 161 DGTEVNG------RKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSS 214
Query: 762 GSYSRSRSRSCSRSYSRSRSR--SRSRSRSSRSRSRSQSRSRSKSYSPGRRR-------- 811
S SRSRSRS SRS S+SRSR SRSRS+ +SRS S+ +SRS+S+S G+ R
Sbjct: 215 HSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAE 274
Query: 812 ----------RSRSRSPTPPSSAGLGSNSAPPIPDSRLGEENKG 845
+ +SRSP+ S S S + R+ EE +G
Sbjct: 275 EKIQNNDNVGKPKSRSPSRHKSK---SKSRSRSQERRVEEEKRG 315
Score = 73.6 bits (179), Expect = 8e-13
Identities = 59/143 (41%), Positives = 76/143 (53%), Gaps = 17/143 (11%)
Query: 697 PSHDRPRN---SEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSR- 752
PS ++ R+ S G ++ + K++ G+ K S PSR +S+SKSR RS R
Sbjct: 250 PSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRS-PSRHKSKSKSRSRSQERR 308
Query: 753 ---------SNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSR-SRSSRSRSRSQSRSRS 802
S RS + S SRSRSRS S SRSRSRS+S+ R R RSR +SRSRS
Sbjct: 309 VEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRS 368
Query: 803 KSYSPGRRRRSRSRSPTPPSSAG 825
+S S + RSR R S AG
Sbjct: 369 RSRS--KSERSRKRGSKRDSKAG 389
Score = 68.2 bits (165), Expect = 3e-11
Identities = 55/130 (42%), Positives = 75/130 (57%), Gaps = 11/130 (8%)
Query: 698 SHDRPRN-SEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSR 756
S R R+ SE + G +A +++K R+ S SRS SK R + S S+ R
Sbjct: 366 SRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQR 425
Query: 757 S----SKSSGSYSRSRSRSCSRSYSR----SRSRSRSRSRSSRSRSRSQSRSRSKSYSPG 808
S+++G+ +RSRS S S S+ S SRSRS+S +S++RSRS+SRSRS S SP
Sbjct: 426 EGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKS-ASKTRSRSKSRSRSASRSPS 484
Query: 809 R-RRRSRSRS 817
R R RS SRS
Sbjct: 485 RSRSRSHSRS 494
Score = 67.8 bits (164), Expect = 4e-11
Identities = 77/268 (28%), Positives = 119/268 (44%), Gaps = 30/268 (11%)
Query: 633 HINHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVEA 692
H + ++ V Y D+ L KL+ E ++ + IRL P S R + +
Sbjct: 136 HKGRKNEGVIEFVSYSDMKRALE----KLDGTE---VNGRKIRLVEDKPGSRRRRSYSRS 188
Query: 693 FYSPPSHDRPRNS-EGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSR---GR 748
S R R+S + ++G + +K R+R R G R+ SRS+SRS+S+ R
Sbjct: 189 RSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSR 248
Query: 749 SSSRSNSRSSKSSGSYSRSRSR-----------SCSRSYSRSRSRSRSRSRS-SRSRSRS 796
S S+ SRS S SRS+S+ + + SRS SR +S+S+S SRS+ R
Sbjct: 249 SPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERR 308
Query: 797 QSRSRSKSYSPGRR-----RRSRSRSPTPPSSAGLGSNSAPPIPDSRLGEENKGHQMLVK 851
+ S S GR R+SRSRS + S S S D R G + + +
Sbjct: 309 VEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRS-RSRSRSKSKDKRKGRKRSREESRSR 367
Query: 852 MGWSGSGGLGAKEQGIQDPIKGGDVRDK 879
S S ++++G + K G + K
Sbjct: 368 -SRSRSKSERSRKRGSKRDSKAGSSKKK 394
Score = 67.4 bits (163), Expect = 6e-11
Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRS------RS 771
+++ R++ R+ +E++ SR RS+ KS +S SRS S+ S S SRS+S R
Sbjct: 299 KSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRK 358
Query: 772 CSRSYSRSRSRSRSRSRSSRSR--SRSQSRSRSKSYSPGRRRRSRSRSPT 819
SR SRSRSRSRS+S SR R R SK RS+SRSP+
Sbjct: 359 RSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPS 408
Score = 65.9 bits (159), Expect = 2e-10
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 701 RPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKS 760
R S + G R++ +++ ++ KR+ SRSRSRS+S+ S + S+
Sbjct: 328 RQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSK 387
Query: 761 SGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRS--- 817
+GS + + RS SRS SRS S+ R SQ R +S + G + +RSRS
Sbjct: 388 AGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSRSN 447
Query: 818 ----PTPPSSAGLGSNSA 831
P PS + S SA
Sbjct: 448 SKSKPNLPSESRSRSKSA 465
Score = 63.2 bits (152), Expect = 1e-09
Identities = 55/141 (39%), Positives = 70/141 (49%), Gaps = 36/141 (25%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYS-------RSRSR 770
R+K + +R+ + R SRSRSRSKS RS R + R SK+ S RS+SR
Sbjct: 347 RSKSKDKRKGRKRSREESRSRSRSRSKSE-RSRKRGSKRDSKAGSSKKKKKEDTDRSQSR 405
Query: 771 SCSRSYSRSRSRSRSRS---------------RSSRSRSRS----------QSRSRSKSY 805
S SRS S+ R ++S S + +RSRSRS +SRSRSKS
Sbjct: 406 SPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSA 465
Query: 806 SPGRRR---RSRSRSPTPPSS 823
S R R RSRS S +P S
Sbjct: 466 SKTRSRSKSRSRSASRSPSRS 486
>gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]
Length = 344
Score = 86.3 bits (212), Expect = 1e-16
Identities = 65/148 (43%), Positives = 81/148 (54%), Gaps = 23/148 (15%)
Query: 700 DRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRS-S 758
D+PR S +G R++ R+RRR R S SRSRS SKSR RS SRS RS S
Sbjct: 181 DKPRTSHRRSYSGS----RSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRS 236
Query: 759 KSSGSYSRSRSRSC------SRSYSRSR-------SRSRSRSRSSRSRSRSQSRSRSKSY 805
+S G SRS+S+S S S+SRSR SRSRSRSRS + + +S+S+S
Sbjct: 237 RSKGRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRS- 295
Query: 806 SPGRRRRSRSRSPTPPSSAGLGSNSAPP 833
R +SRS SP P + S S PP
Sbjct: 296 ----RSQSRSNSPLPVPPSKARSVSPPP 319
Score = 81.6 bits (200), Expect = 3e-15
Identities = 58/132 (43%), Positives = 72/132 (54%), Gaps = 22/132 (16%)
Query: 729 QEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSR 788
++K + RS S S+SR RS RS SRS +SS S SRS S+S SRS SRS+ RSRSRS+
Sbjct: 180 EDKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSK 239
Query: 789 SSRSRSRSQ------------SRSRSKSYSPGRRRRSRSRSPTPPSSAGL---------- 826
+SRS+S+ SRSRSK R RSRSRSP +
Sbjct: 240 GRKSRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQS 299
Query: 827 GSNSAPPIPDSR 838
SNS P+P S+
Sbjct: 300 RSNSPLPVPPSK 311
Score = 63.9 bits (154), Expect = 6e-10
Identities = 49/120 (40%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
Query: 722 RARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRS 781
+ R +G + S R+ K G + N R + S RS S SRS SRSR
Sbjct: 143 KERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDKPRTSHRRSYSGSRSRSRSRR 202
Query: 782 RSRSRSR-----------SSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNS 830
RSRSRSR SRSRSRS+S+ RS+S S GR+ RS+S+S P S G S+S
Sbjct: 203 RSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSKS-KPKSDRGSHSHS 261
Score = 63.9 bits (154), Expect = 6e-10
Identities = 50/122 (40%), Positives = 66/122 (54%), Gaps = 31/122 (25%)
Query: 718 RAKMRARRRKGQEKRNSG-PSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRS- 775
R++ R+R + R+ G SRS+S+SK + S S+SR S+S Y +SRSRS SRS
Sbjct: 223 RSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSDRGSHSHSR-SRSKDEYEKSRSRSRSRSP 281
Query: 776 --------YSRSRSRSRSRSRS--------------------SRSRSRSQSRSRSKSYSP 807
S+SRSRS+SRS S SRSRSRS+S+SRS+S S
Sbjct: 282 KENGKGDIKSKSRSRSQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSS 341
Query: 808 GR 809
R
Sbjct: 342 SR 343
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 86.3 bits (212), Expect = 1e-16
Identities = 59/118 (50%), Positives = 72/118 (61%), Gaps = 7/118 (5%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSR---SRSCSR 774
R+K R+ + R+S PS SRSRS+SR RSSS S SRS SS SRSR SRS SR
Sbjct: 203 RSKSRSSHSRSSS-RSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSR 261
Query: 775 SY---SRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSN 829
S+ S R RS S S SS R+R +SRSRS S ++RR+RSRSP + GS+
Sbjct: 262 SHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRHRSSSGSS 319
Score = 80.9 bits (198), Expect = 5e-15
Identities = 57/107 (53%), Positives = 65/107 (60%), Gaps = 10/107 (9%)
Query: 729 QEKRNSGPSRSRSRSKSRG---RSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRS 785
+E N S RSRSKSR RSSSRS+S SS S S SRSRS S S+S SRS SR RS
Sbjct: 190 EEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERS 249
Query: 786 RSRSSRSRSRSQS-------RSRSKSYSPGRRRRSRSRSPTPPSSAG 825
RSR S+SRS S+S R RS S S R+R RS + SS+G
Sbjct: 250 RSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSG 296
Score = 67.0 bits (162), Expect = 8e-11
Identities = 50/104 (48%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 731 KRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSS 790
K N S +K + SRS SRSS S S SRS S S S SRSRSRSRS S SS
Sbjct: 182 KYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSS---SRSSSPSSSRSRSRSRSRS-SSSS 237
Query: 791 RSRSRSQSRSRSKSYSPGRRRRSRS-RSPTPPSSAGLGSNSAPP 833
+SRSRS SR RS+S R SRS R + P S+S+ P
Sbjct: 238 QSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSP 281
Score = 58.2 bits (139), Expect = 4e-08
Identities = 50/126 (39%), Positives = 63/126 (50%), Gaps = 21/126 (16%)
Query: 698 SHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRS 757
S R +S ++ R++ R+R R ++ S SR RS+SRG S SRS+SRS
Sbjct: 204 SKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRG-SKSRSSSRS 262
Query: 758 ------------SKSSGSYSRSRSRSCSRSYS---RSRSRSRSRS-----RSSRSRSRSQ 797
S SS S R+R RS SRS S R + R+RSRS RSS S S
Sbjct: 263 HRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRHRSSSGSSHSG 322
Query: 798 SRSRSK 803
SRS SK
Sbjct: 323 SRSSSK 328
>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
Length = 1337
Score = 85.9 bits (211), Expect = 2e-16
Identities = 88/314 (28%), Positives = 114/314 (36%), Gaps = 41/314 (13%)
Query: 513 PFRMQRPPHFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYPHRFD 572
PF PP +GP PP P F H F PP F PP P P
Sbjct: 80 PFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFP-VPPCF--PPMPPPMPCPNNPPVPGAP 136
Query: 573 YPQGDFPAEMGPPHHHPGHRMPHPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPP 632
QG FP M PP MPHP PP PQ ++ PP G
Sbjct: 137 PGQGTFPFMMPPPS------MPHPP----PPPVMPQQVNYQYPP-------------GYS 173
Query: 633 HINHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVEA 692
H N PS + + P+ + ++ L P P P PSER
Sbjct: 174 HHNFPPPSFNS---FQNNPSSFLPSANNSSSPHFRHLPP----YPLPKAPSERRSPERLK 226
Query: 693 FYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNS-----GPSRSRSRSKSRG 747
Y H + G L R + RRR+ R+ PSR RS +SR
Sbjct: 227 HYDDHRHRDHSHGRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRE 286
Query: 748 RSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSR---SQSRSRSKS 804
R R R ++ S S RS + RS SRS SR + R+R + R +QS + K+
Sbjct: 287 RERERHRHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDNQSSGKDKN 346
Query: 805 YSPGRRRRSRSRSP 818
Y+ + + P
Sbjct: 347 YTSIKEKEPEETMP 360
Score = 44.3 bits (103), Expect = 5e-04
Identities = 71/292 (24%), Positives = 91/292 (31%), Gaps = 63/292 (21%)
Query: 357 PPAPPPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPHDQIPP 416
P PP P P+T +S P +P ++ P+A GP P P PP
Sbjct: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIR--PP 101
Query: 417 NKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGP-PHCPPWNNSHEGMWGEQRGDPGWNGQ 475
P PV P PP PP P P P PP GQ
Sbjct: 102 FPNHQMRHPFPVPPC---FPPMPPPMPCPNNPPVPGAPP-------------------GQ 139
Query: 476 RDAPWNNQPDAAWNSQFEGPWNSQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQF 535
P F P S PP PP P +PP H F
Sbjct: 140 GTFP------------FMMPPPSMPHPPP-------PPV---MPQQVNYQYPPGYSHHNF 177
Query: 536 NQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPAEMGPPH---HHPGHR 592
PP ++F P F+ P + P + H YP P+E P H+ HR
Sbjct: 178 -PPPSFNSFQNNPSSFL----PSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHR 232
Query: 593 MPHPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPPHINHDDPSLVPN 644
+H G +H G+ P RRQ + + D P+
Sbjct: 233 H-----RDHSHGRGERHRSL---DRRERGRSPDRRRQDSRYRSDYDRGRTPS 276
Score = 42.0 bits (97), Expect = 0.003
Identities = 36/111 (32%), Positives = 41/111 (36%), Gaps = 12/111 (10%)
Query: 356 PPPAPPPAPAPAPAIP-----PTTQPDD--SKPPIQMPGSSEYEAPGGVQDPAAAGPRGP 408
PPP PP A P P P P Q PP P P P A +G
Sbjct: 82 PPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGT 141
Query: 409 GPHDQIPPNKPPWFDQPHPVAPWGQQQPPEQPP-YPHHQGGPPHCPPWNNS 458
P PP+ P P PV P QQ + PP Y HH PP + N+
Sbjct: 142 FPFMMPPPSMP--HPPPPPVMP--QQVNYQYPPGYSHHNFPPPSFNSFQNN 188
Score = 34.7 bits (78), Expect = 0.42
Identities = 28/98 (28%), Positives = 32/98 (32%), Gaps = 9/98 (9%)
Query: 355 PP--PPAPPPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAG---PRGPG 409
PP PP PPP P P P P P MP S P P P G
Sbjct: 114 PPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYS 173
Query: 410 PHDQIPPNKPPWFDQPHPVAPWGQQQPPEQ----PPYP 443
H+ PP+ + + P P PPYP
Sbjct: 174 HHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYP 211
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 85.5 bits (210), Expect = 2e-16
Identities = 142/578 (24%), Positives = 197/578 (34%), Gaps = 80/578 (13%)
Query: 320 QHEEFVTSLAQQQQQQQQQQQQLQMPQMEAEVKATPPPPAPP-PAPAPAP---AIPPTTQ 375
Q E + + QQQ Q Q LQ P ++ PP P P P P P A+PP
Sbjct: 165 QDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGS 224
Query: 376 PDDSKPPIQ-------MPGSSEYEAPG--GVQDPAAAGPRGPGPHDQIPPNKPPWFDQPH 426
P S+ P Q +P + +AP + P+ P P PH PP +P
Sbjct: 225 PTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPH---PPLQPLTGSAGQ 281
Query: 427 PVAPWGQQQPP---EQPPYPHH-QGGPPHCPPWNNSHEGMWGEQRGDPGWNGQRDAPWNN 482
P AP QPP + PP PH Q GP P G+ P Q AP
Sbjct: 282 PSAP-SHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGL-------PPQASQGQAPLGT 333
Query: 483 QPDAAW-NSQFEGPWNS---QHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQP 538
P AA+ ++ + P + Q +QPP Q PP + P P P Q P
Sbjct: 334 SPAAAYPHTSLQLPASQSALQSQQPP--REQPLPPAPLAMPHIKPPPTTPIPQLPAPQAH 391
Query: 539 PHPHNFNRFPPRFMQDDFPP------------RHPFERPPYPHRF---DYPQGDFPAEMG 583
HP + + P M + PP HP P P + P PA+
Sbjct: 392 KHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQ-- 449
Query: 584 PPHHHPGHRMP-----HPGINEH-----PPWAGPQHP--DFGPPPHGFNGQPPHMRRQGP 631
PP +P HP H PP+A QHP GPPP P
Sbjct: 450 PPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA--QHPFVPGGPPPITPPTCPSTSTPPAG 507
Query: 632 PHINHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVE 691
P + P + G PL ++ E D ++ PPP P S +
Sbjct: 508 PGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSP---SPEP 564
Query: 692 AFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSS 751
PSH + F++ R + P +K R +
Sbjct: 565 TVVDTPSH----------ASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREEAIE 614
Query: 752 RSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRR 811
++ R ++ R R + + R R R R R++++ S + S G
Sbjct: 615 KA-KREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGH 673
Query: 812 RSRSRSPTPPSSAGLGSNSAPPIPDSR-LGEENKGHQM 848
S P P + A + P P R L E + H M
Sbjct: 674 MRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVM 711
Score = 34.7 bits (78), Expect = 0.42
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 24/128 (18%)
Query: 721 MRARR--------RKGQEKRNSGPS----------RSRSRSKSRGRSSSRSNSRSSKSSG 762
MR RR R G++K+ + P RS R+ S+S ++S++
Sbjct: 18 MRTRRSRGSMSTLRSGRKKQPASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKK 77
Query: 763 SYSRSRSRSCSRSYSRSRSRSRSRS------RSSRSRSRSQSRSRSKSYSPGRRRRSRSR 816
S + + + S S R R + S R+S ++++Q SR S S G S SR
Sbjct: 78 SAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSR 137
Query: 817 SPTPPSSA 824
S S+
Sbjct: 138 SVNDEGSS 145
Score = 34.3 bits (77), Expect = 0.55
Identities = 30/99 (30%), Positives = 35/99 (35%), Gaps = 21/99 (21%)
Query: 527 PPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERP----PYPHRFDYPQGDFPAEM 582
P H QH + H H + Q P HP P P+ RF YP G P +
Sbjct: 870 PHHHQHSHIHSHLHLHQQDPLH----QGSAGPVHPLVDPLTAGPHLARFPYPPGTLPNPL 925
Query: 583 --GPPHHHPGHRMPHPGINEHPPWAGPQHPDFG---PPP 616
PPH H R HP + P D PPP
Sbjct: 926 LGQPPHEHEMLR--------HPVFGTPYPRDLPGAIPPP 956
Score = 33.1 bits (74), Expect = 1.2
Identities = 52/210 (24%), Positives = 70/210 (33%), Gaps = 36/210 (17%)
Query: 510 REPPFRMQRPPHFRGPFPPHQQ--HPQFNQPPH--PHNFNRFPPRFMQDDFPPRHPFERP 565
RE R + P F PP HP N H H+ PP F HP P
Sbjct: 761 RERELRERMKPGFEVK-PPELDPLHPAANPMEHFARHSALTIPPTAGPHPFASFHPGLNP 819
Query: 566 PYPHRFDY------PQGDFPAEMGPPHHH----------PGHRMPHPGINEHPPWAGPQH 609
R P+ +P + H P R+ + H QH
Sbjct: 820 LERERLALAGPQLRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHH----QH 875
Query: 610 PDFGPPPHGFNGQPPHMRRQGPPHINHDDPSLVPNVPYFDLPAG-LMAPLVKLEDHEYKP 668
H P H GP H D + P++ F P G L PL+ HE++
Sbjct: 876 SHIHSHLHLHQQDPLHQGSAGPVHPLVDPLTAGPHLARFPYPPGTLPNPLLGQPPHEHEM 935
Query: 669 LD--------PKDI--RLPPPMPPSERLLA 688
L P+D+ +PPPM + +L A
Sbjct: 936 LRHPVFGTPYPRDLPGAIPPPMSAAHQLQA 965
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 85.5 bits (210), Expect = 2e-16
Identities = 142/578 (24%), Positives = 197/578 (34%), Gaps = 80/578 (13%)
Query: 320 QHEEFVTSLAQQQQQQQQQQQQLQMPQMEAEVKATPPPPAPP-PAPAPAP---AIPPTTQ 375
Q E + + QQQ Q Q LQ P ++ PP P P P P P A+PP
Sbjct: 719 QDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGS 778
Query: 376 PDDSKPPIQ-------MPGSSEYEAPG--GVQDPAAAGPRGPGPHDQIPPNKPPWFDQPH 426
P S+ P Q +P + +AP + P+ P P PH PP +P
Sbjct: 779 PTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPH---PPLQPLTGSAGQ 835
Query: 427 PVAPWGQQQPP---EQPPYPHH-QGGPPHCPPWNNSHEGMWGEQRGDPGWNGQRDAPWNN 482
P AP QPP + PP PH Q GP P G+ P Q AP
Sbjct: 836 PSAP-SHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGL-------PPQASQGQAPLGT 887
Query: 483 QPDAAW-NSQFEGPWNS---QHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQP 538
P AA+ ++ + P + Q +QPP Q PP + P P P Q P
Sbjct: 888 SPAAAYPHTSLQLPASQSALQSQQPP--REQPLPPAPLAMPHIKPPPTTPIPQLPAPQAH 945
Query: 539 PHPHNFNRFPPRFMQDDFPP------------RHPFERPPYPHRF---DYPQGDFPAEMG 583
HP + + P M + PP HP P P + P PA+
Sbjct: 946 KHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQ-- 1003
Query: 584 PPHHHPGHRMP-----HPGINEH-----PPWAGPQHP--DFGPPPHGFNGQPPHMRRQGP 631
PP +P HP H PP+A QHP GPPP P
Sbjct: 1004 PPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA--QHPFVPGGPPPITPPTCPSTSTPPAG 1061
Query: 632 PHINHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVE 691
P + P + G PL ++ E D ++ PPP P S +
Sbjct: 1062 PGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSP---SPEP 1118
Query: 692 AFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSS 751
PSH + F++ R + P +K R +
Sbjct: 1119 TVVDTPSH----------ASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREEAIE 1168
Query: 752 RSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRR 811
++ R ++ R R + + R R R R R++++ S + S G
Sbjct: 1169 KA-KREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGH 1227
Query: 812 RSRSRSPTPPSSAGLGSNSAPPIPDSR-LGEENKGHQM 848
S P P + A + P P R L E + H M
Sbjct: 1228 MRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVM 1265
Score = 34.7 bits (78), Expect = 0.42
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 24/128 (18%)
Query: 721 MRARR--------RKGQEKRNSGPS----------RSRSRSKSRGRSSSRSNSRSSKSSG 762
MR RR R G++K+ + P RS R+ S+S ++S++
Sbjct: 572 MRTRRSRGSMSTLRSGRKKQPASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKK 631
Query: 763 SYSRSRSRSCSRSYSRSRSRSRSRS------RSSRSRSRSQSRSRSKSYSPGRRRRSRSR 816
S + + + S S R R + S R+S ++++Q SR S S G S SR
Sbjct: 632 SAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSR 691
Query: 817 SPTPPSSA 824
S S+
Sbjct: 692 SVNDEGSS 699
Score = 34.3 bits (77), Expect = 0.55
Identities = 30/99 (30%), Positives = 35/99 (35%), Gaps = 21/99 (21%)
Query: 527 PPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERP----PYPHRFDYPQGDFPAEM 582
P H QH + H H + Q P HP P P+ RF YP G P +
Sbjct: 1424 PHHHQHSHIHSHLHLHQQDPLH----QGSAGPVHPLVDPLTAGPHLARFPYPPGTLPNPL 1479
Query: 583 --GPPHHHPGHRMPHPGINEHPPWAGPQHPDFG---PPP 616
PPH H R HP + P D PPP
Sbjct: 1480 LGQPPHEHEMLR--------HPVFGTPYPRDLPGAIPPP 1510
Score = 33.1 bits (74), Expect = 1.2
Identities = 52/210 (24%), Positives = 70/210 (33%), Gaps = 36/210 (17%)
Query: 510 REPPFRMQRPPHFRGPFPPHQQ--HPQFNQPPH--PHNFNRFPPRFMQDDFPPRHPFERP 565
RE R + P F PP HP N H H+ PP F HP P
Sbjct: 1315 RERELRERMKPGFEVK-PPELDPLHPAANPMEHFARHSALTIPPTAGPHPFASFHPGLNP 1373
Query: 566 PYPHRFDY------PQGDFPAEMGPPHHH----------PGHRMPHPGINEHPPWAGPQH 609
R P+ +P + H P R+ + H QH
Sbjct: 1374 LERERLALAGPQLRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHH----QH 1429
Query: 610 PDFGPPPHGFNGQPPHMRRQGPPHINHDDPSLVPNVPYFDLPAG-LMAPLVKLEDHEYKP 668
H P H GP H D + P++ F P G L PL+ HE++
Sbjct: 1430 SHIHSHLHLHQQDPLHQGSAGPVHPLVDPLTAGPHLARFPYPPGTLPNPLLGQPPHEHEM 1489
Query: 669 LD--------PKDI--RLPPPMPPSERLLA 688
L P+D+ +PPPM + +L A
Sbjct: 1490 LRHPVFGTPYPRDLPGAIPPPMSAAHQLQA 1519
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 85.5 bits (210), Expect = 2e-16
Identities = 142/578 (24%), Positives = 197/578 (34%), Gaps = 80/578 (13%)
Query: 320 QHEEFVTSLAQQQQQQQQQQQQLQMPQMEAEVKATPPPPAPP-PAPAPAP---AIPPTTQ 375
Q E + + QQQ Q Q LQ P ++ PP P P P P P A+PP
Sbjct: 719 QDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGS 778
Query: 376 PDDSKPPIQ-------MPGSSEYEAPG--GVQDPAAAGPRGPGPHDQIPPNKPPWFDQPH 426
P S+ P Q +P + +AP + P+ P P PH PP +P
Sbjct: 779 PTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPH---PPLQPLTGSAGQ 835
Query: 427 PVAPWGQQQPP---EQPPYPHH-QGGPPHCPPWNNSHEGMWGEQRGDPGWNGQRDAPWNN 482
P AP QPP + PP PH Q GP P G+ P Q AP
Sbjct: 836 PSAP-SHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGL-------PPQASQGQAPLGT 887
Query: 483 QPDAAW-NSQFEGPWNS---QHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQP 538
P AA+ ++ + P + Q +QPP Q PP + P P P Q P
Sbjct: 888 SPAAAYPHTSLQLPASQSALQSQQPP--REQPLPPAPLAMPHIKPPPTTPIPQLPAPQAH 945
Query: 539 PHPHNFNRFPPRFMQDDFPP------------RHPFERPPYPHRF---DYPQGDFPAEMG 583
HP + + P M + PP HP P P + P PA+
Sbjct: 946 KHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQ-- 1003
Query: 584 PPHHHPGHRMP-----HPGINEH-----PPWAGPQHP--DFGPPPHGFNGQPPHMRRQGP 631
PP +P HP H PP+A QHP GPPP P
Sbjct: 1004 PPGLTQSQNLPPPPASHPPTGLHQVAPQPPFA--QHPFVPGGPPPITPPTCPSTSTPPAG 1061
Query: 632 PHINHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVE 691
P + P + G PL ++ E D ++ PPP P S +
Sbjct: 1062 PGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPPPPPRSP---SPEP 1118
Query: 692 AFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSS 751
PSH + F++ R + P +K R +
Sbjct: 1119 TVVDTPSH----------ASQSARFYKHLDRGYNSCARTDLYFMPLAGSKLAKKREEAIE 1168
Query: 752 RSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRR 811
++ R ++ R R + + R R R R R++++ S + S G
Sbjct: 1169 KA-KREAEQKAREEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGH 1227
Query: 812 RSRSRSPTPPSSAGLGSNSAPPIPDSR-LGEENKGHQM 848
S P P + A + P P R L E + H M
Sbjct: 1228 MRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVM 1265
Score = 34.7 bits (78), Expect = 0.42
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 24/128 (18%)
Query: 721 MRARR--------RKGQEKRNSGPS----------RSRSRSKSRGRSSSRSNSRSSKSSG 762
MR RR R G++K+ + P RS R+ S+S ++S++
Sbjct: 572 MRTRRSRGSMSTLRSGRKKQPASPDGRTSPINEDIRSSGRNSPSAASTSSNDSKAETVKK 631
Query: 763 SYSRSRSRSCSRSYSRSRSRSRSRS------RSSRSRSRSQSRSRSKSYSPGRRRRSRSR 816
S + + + S S R R + S R+S ++++Q SR S S G S SR
Sbjct: 632 SAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSR 691
Query: 817 SPTPPSSA 824
S S+
Sbjct: 692 SVNDEGSS 699
Score = 34.3 bits (77), Expect = 0.55
Identities = 30/99 (30%), Positives = 35/99 (35%), Gaps = 21/99 (21%)
Query: 527 PPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERP----PYPHRFDYPQGDFPAEM 582
P H QH + H H + Q P HP P P+ RF YP G P +
Sbjct: 1424 PHHHQHSHIHSHLHLHQQDPLH----QGSAGPVHPLVDPLTAGPHLARFPYPPGTLPNPL 1479
Query: 583 --GPPHHHPGHRMPHPGINEHPPWAGPQHPDFG---PPP 616
PPH H R HP + P D PPP
Sbjct: 1480 LGQPPHEHEMLR--------HPVFGTPYPRDLPGAIPPP 1510
Score = 33.1 bits (74), Expect = 1.2
Identities = 52/210 (24%), Positives = 70/210 (33%), Gaps = 36/210 (17%)
Query: 510 REPPFRMQRPPHFRGPFPPHQQ--HPQFNQPPH--PHNFNRFPPRFMQDDFPPRHPFERP 565
RE R + P F PP HP N H H+ PP F HP P
Sbjct: 1315 RERELRERMKPGFEVK-PPELDPLHPAANPMEHFARHSALTIPPTAGPHPFASFHPGLNP 1373
Query: 566 PYPHRFDY------PQGDFPAEMGPPHHH----------PGHRMPHPGINEHPPWAGPQH 609
R P+ +P + H P R+ + H QH
Sbjct: 1374 LERERLALAGPQLRPEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHH----QH 1429
Query: 610 PDFGPPPHGFNGQPPHMRRQGPPHINHDDPSLVPNVPYFDLPAG-LMAPLVKLEDHEYKP 668
H P H GP H D + P++ F P G L PL+ HE++
Sbjct: 1430 SHIHSHLHLHQQDPLHQGSAGPVHPLVDPLTAGPHLARFPYPPGTLPNPLLGQPPHEHEM 1489
Query: 669 LD--------PKDI--RLPPPMPPSERLLA 688
L P+D+ +PPPM + +L A
Sbjct: 1490 LRHPVFGTPYPRDLPGAIPPPMSAAHQLQA 1519
>gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens]
Length = 221
Score = 85.1 bits (209), Expect = 3e-16
Identities = 57/102 (55%), Positives = 68/102 (66%), Gaps = 9/102 (8%)
Query: 728 GQEKRNSGPSRSR-SRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSR 786
G +R+ P R R SRS+SR RS SRS SR S+S SRSR+RS SRS S+SRS RS+
Sbjct: 114 GYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSK---SRSRTRSRSRSTSKSRSARRSK 170
Query: 787 SRSS-----RSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSS 823
S+SS RSRSRS+SRSRS R +SRSRS +PP S
Sbjct: 171 SKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSPPKS 212
Score = 81.3 bits (199), Expect = 4e-15
Identities = 53/115 (46%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 696 PPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSK---SRGRSSSR 752
PP R + G + R RRR+ R+ SRSRSRS+ S+ RS +R
Sbjct: 95 PPDSHHSRRGPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTR 154
Query: 753 SNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSP 807
S SRS+ S S RS+S+S S S SRSRSRSRSRSRS S+ +S+SRS+S SP
Sbjct: 155 SRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSP 209
Score = 79.7 bits (195), Expect = 1e-14
Identities = 58/111 (52%), Positives = 66/111 (59%), Gaps = 11/111 (9%)
Query: 732 RNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSR 791
R S R R RS+SR RS SRS SRS YSRS+SRS +RS SRS S+SRS +R S+
Sbjct: 117 RRSRSPRRRRRSRSRSRSRSRSRSRSR-----YSRSKSRSRTRSRSRSTSKSRS-ARRSK 170
Query: 792 SRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSRLGEE 842
S+S S SRSRS+S R RSRSRSP P S S S P EE
Sbjct: 171 SKSSSVSRSRSRS-----RSRSRSRSPPPVSKRESKSRSRSKSPPKSPEEE 216
Score = 42.0 bits (97), Expect = 0.003
Identities = 27/53 (50%), Positives = 30/53 (56%)
Query: 767 SRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPT 819
SR R Y RSRS R RSRS+SRSRS+S S R RS+SRS T
Sbjct: 101 SRRGPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRT 153
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 84.7 bits (208), Expect = 4e-16
Identities = 97/339 (28%), Positives = 115/339 (33%), Gaps = 59/339 (17%)
Query: 345 PQMEAEVKATPPPPAPPPAPAP----APAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDP 400
PQ + + PPPP P P P P PP PP S PG Q P
Sbjct: 62 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGP 121
Query: 401 AAAG---PRGPGPHDQIPPNKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWNN 457
G P+GP P PP KP Q P P G +P PP QG PP +
Sbjct: 122 PPQGGNQPQGPPP----PPGKP----QGPP--PQGGNKPQGPPPPGKPQGPPPQGDNKSR 171
Query: 458 SHEGMWGEQRGDPGWNGQR--------DAPWNNQPDAAWNSQFEGPWNSQHEQPPWGGGQ 509
S G+ +G P G + P P Q P PP G +
Sbjct: 172 SSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNK 231
Query: 510 ----REPPFRMQRPP-----HFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRH 560
R PP + Q PP +GP PP PQ PP N + PP PP
Sbjct: 232 SQSARSPPGKPQGPPPQGGNQPQGP-PPPPGKPQ-GPPPQGGNKPQGPP-------PPGK 282
Query: 561 PFERPPYPHRFDYPQGDFPAE-MGPP---HHHPGHRMPHPGINEHPPWAGPQHPDFGPPP 616
P PP P + GPP + P P PG + PP G P PPP
Sbjct: 283 PQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPP 342
Query: 617 HGFNGQPPH------------MRRQGPPHINHDDPSLVP 643
G PP + QGPP ++P P
Sbjct: 343 GKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPP 381
Score = 84.0 bits (206), Expect = 6e-16
Identities = 96/317 (30%), Positives = 113/317 (35%), Gaps = 65/317 (20%)
Query: 345 PQMEAEVKATPPPPAPPPAPAPAPAIPPTTQPDDSKPPIQMP-----GSSEYEAPGGVQD 399
PQ + + PPPP P P P P P KP P S PG Q
Sbjct: 123 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQG 182
Query: 400 PAAAG---PRGPGPHDQIPPNKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWN 456
P G P+GP P PP KP Q P P G +P PP QG PP +
Sbjct: 183 PPPQGGNQPQGPPP----PPGKP----QGPP--PQGGNKPQGPPPPGKPQGPPPQGDNKS 232
Query: 457 NSHEGMWGEQRGDPGWNGQRDA--------PWNNQPDAAWNSQFEGPWNSQHEQPPWGGG 508
S G+ +G P G + P P Q P PP GG
Sbjct: 233 QSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGS 292
Query: 509 Q----REPPFRMQRPP-----HFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPR 559
+ R PP + Q PP +GP PP PQ PP N + PP PP
Sbjct: 293 KSRSSRSPPGKPQGPPPQGGNQPQGP-PPPPGKPQ-GPPPQGGNKPQGPP-------PPG 343
Query: 560 HPFERPPYPHRFDYPQGDFPAEMGPPHHHPGHRMPHPGINEHPPWAGPQHPDFGPPPHGF 619
P + PP PQG + R P PG + PP +P PPP G
Sbjct: 344 KP-QGPP-------PQGGSKSRSA--------RSP-PGKPQGPPQQEGNNPQGPPPPAGG 386
Query: 620 NGQ----PPHMRRQGPP 632
N Q PP + QGPP
Sbjct: 387 NPQQPQAPPAGQPQGPP 403
Score = 80.1 bits (196), Expect = 9e-15
Identities = 88/313 (28%), Positives = 109/313 (34%), Gaps = 27/313 (8%)
Query: 345 PQMEAEVKATPPPPAPPPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAG 404
PQ + + P PP P P P QP PP P + Q P G
Sbjct: 41 PQGGNKPQGPPSPPGKPQGPPPQGG----NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 96
Query: 405 -PRGPGPH--DQIPPNKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWNNSHEG 461
P+GP P P PP +P P G QP PP P GPP P N +G
Sbjct: 97 KPQGPPPQGDKSRSPRSPP--GKPQGPPPQGGNQPQGPPPPPGKPQGPP--PQGGNKPQG 152
Query: 462 --MWGEQRGDPGWNGQRDAPWNNQPDAAWNSQFEGPWNSQHEQPPWGGGQREPPFRMQRP 519
G+ +G P + + P +G Q PP G Q PP +P
Sbjct: 153 PPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 212
Query: 520 PHFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFP-----PRHPFERPPYPHRFDYP 574
+GP PP + Q + R PP Q P P+ P PP + P
Sbjct: 213 ---QGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGP-PPPPGKPQGPPP 268
Query: 575 QGDFPAEMGPPHHHPGHRMPHPGINEHPPWAGPQHPDFGPPPHGFN----GQPPHMRRQG 630
QG + PP P P G + P P GPPP G N PP + QG
Sbjct: 269 QGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQ-GPPPQGGNQPQGPPPPPGKPQG 327
Query: 631 PPHINHDDPSLVP 643
PP + P P
Sbjct: 328 PPPQGGNKPQGPP 340
Score = 69.3 bits (168), Expect = 2e-11
Identities = 79/268 (29%), Positives = 102/268 (38%), Gaps = 26/268 (9%)
Query: 389 SEYEAPGGVQ-DPAAAGPRGPGPHDQIPPNKPPWFDQPHPVAPWGQQQPPEQPPYPHHQG 447
S+ E+P + +P A P+G G Q PP+ P +P P G QP PP P
Sbjct: 24 SQEESPSLIAGNPQGAPPQG-GNKPQGPPSPP---GKPQGPPPQGGNQPQGPPPPPGKPQ 79
Query: 448 GPPHCPPWNNSHEG--MWGEQRGDPGWNGQRDAPWNNQPDAAWNSQFEGPWNSQHEQPPW 505
GPP P N +G G+ +G P + +P + P +G Q PP
Sbjct: 80 GPP--PQGGNKPQGPPPPGKPQGPPPQGDKSRSP-RSPPGKPQGPPPQGGNQPQGPPPPP 136
Query: 506 GGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPP--RHPFE 563
G Q PP +P +GP PP + Q + +R PP Q P P
Sbjct: 137 GKPQGPPPQGGNKP---QGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQG 193
Query: 564 RPPYPHRFDYPQGDFP----AEMGPPHHHPGHRMPHPGINEHPPWAGPQHPDFGPPPHGF 619
PP P + PQG P GPP P G N+ P GPPP G
Sbjct: 194 PPPPPGK---PQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGG 250
Query: 620 N----GQPPHMRRQGPPHINHDDPSLVP 643
N PP + QGPP + P P
Sbjct: 251 NQPQGPPPPPGKPQGPPPQGGNKPQGPP 278
Score = 42.7 bits (99), Expect = 0.002
Identities = 40/133 (30%), Positives = 49/133 (36%), Gaps = 28/133 (21%)
Query: 345 PQMEAEVKATPPPPAPPPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAG 404
PQ ++ +++ PP P P P QP PP P + Q P G
Sbjct: 288 PQGGSKSRSSRSPPGKPQGPPPQGG----NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 343
Query: 405 -PRGPGPHD-------QIPPNKPPWFDQ--------PHPVAPWGQQQP-------PEQPP 441
P+GP P + PP KP Q P P A QQP P+ PP
Sbjct: 344 KPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPP 403
Query: 442 YPHHQGGPPHCPP 454
P QGG P PP
Sbjct: 404 RP-PQGGRPSRPP 415
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 84.0 bits (206), Expect = 6e-16
Identities = 101/336 (30%), Positives = 117/336 (34%), Gaps = 63/336 (18%)
Query: 349 AEVKATPP-PPAPPPAPAPAPAIP---PTTQPDDSKPPIQMPGSSEYEA--PGGVQDPAA 402
AE T P P P P P P P IP P T P PP Q PG A P P
Sbjct: 647 AETSHTEPVSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQ-PGPPVVGALQPPAFTPPLG 705
Query: 403 AGPRGPGPHDQIPPNKPPWFD---QPHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWN--N 457
P G GP PP PP+ P + P P P P PPH PP + N
Sbjct: 706 IPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPN 765
Query: 458 SHEGMWGE-QRGD----------PGWNGQRDAPWNNQPDAAWNSQFEGPWNSQHEQPPWG 506
G G + GD P P QP + +Q P Q P
Sbjct: 766 LVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAPST 825
Query: 507 G--GQREPPFRMQR-----PPHFR-------GPFPPHQQHPQFNQPPHPHNFNRFPPRFM 552
G G R +QR PPH + P PPH H PP P F PP M
Sbjct: 826 GLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHR--GPPPGPGGFAMPPPHGM 883
Query: 553 QDDFPPRHPFERPPYPHRFDYPQGDFPAEMGP------PHHHPGHRMPHPGINEHPPWAG 606
+ FPP PF RP G P GP P G + P + P
Sbjct: 884 KGPFPPHGPFVRP----------GGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQA 933
Query: 607 PQHP----DFGPPPHGFNGQPPHMRRQGPPHINHDD 638
PQ P PPP + QPP ++Q P +D+
Sbjct: 934 PQQPQQQQQQQPPP---SQQPPPTQQQ-PQQFRNDN 965
Score = 62.8 bits (151), Expect = 1e-09
Identities = 92/352 (26%), Positives = 116/352 (32%), Gaps = 93/352 (26%)
Query: 249 FLAVEEDKQQKIARLLQLWEKNGYFDDSIIQQLQSPALGLGQ---YQATLINEYSSVVQP 305
+L EDK KI R+L LW+KNG F IIQ L A G + N S P
Sbjct: 100 YLCPSEDKS-KIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPP 158
Query: 306 VQLAFQQQIQTLKTQ----------------HEEFVTSLAQQQQQQQQQQQQLQMPQ--- 346
V+++ + Q + F T+ QQ QQ Q QQ PQ
Sbjct: 159 VKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPA 218
Query: 347 -----------MEAEVKATPPPPAPPPAPAPAPAIPPTTQPD--DSKPPIQMPGSSEYEA 393
+ A++K TP P+ A A PP Q D K + E EA
Sbjct: 219 LDNAVMAQVQAITAQLKTTPTQPSEQKA-----AFPPPEQKTAFDKKLLDRFDYDDEPEA 273
Query: 394 PGGVQDPAAAGPRGPGPHDQIPPNKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGPPHCP 453
+ P +PP P P AP PP Q P+
Sbjct: 274 VEESKKEDTTAVTTTAPAAAVPP--APTATVPAAAAPAAASPPPPQAPF----------- 320
Query: 454 PWNNSHEGMWGEQRGDPGWNGQRDAPWNNQPDAAWNSQFEGPWNSQHEQPPWGGGQREPP 513
G PG Q+ A +Q N QP G Q
Sbjct: 321 --------------GFPGDGMQQPAYTQHQ-------------NMDQFQPRMMGIQ---- 349
Query: 514 FRMQRPPHFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERP 565
Q P H + P PP+ Q P F P P FPP Q PP P ++P
Sbjct: 350 ---QDPMHHQVPLPPNGQMPGFGLLPTP----PFPP-MAQPVIPPTPPVQQP 393
Score = 60.5 bits (145), Expect = 7e-09
Identities = 79/308 (25%), Positives = 107/308 (34%), Gaps = 69/308 (22%)
Query: 518 RPPHFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFER------------- 564
+P + FPP +Q F++ + RF DD P +
Sbjct: 240 QPSEQKAAFPPPEQKTAFDK--------KLLDRFDYDDEPEAVEESKKEDTTAVTTTAPA 291
Query: 565 ---PPYPHRFDYPQGDFPAEMGPPHHHPGHRMPHPGINEHPPWAGPQHPD-FGPPPHGFN 620
PP P P PA PP P G+ + P + Q+ D F P G
Sbjct: 292 AAVPPAPTA-TVPAAAAPAAASPPPPQAPFGFPGDGMQQ-PAYTQHQNMDQFQPRMMGIQ 349
Query: 621 GQPPHMRRQGPPHINHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPM 680
P H + PP+ L+P P+ + P++ PP
Sbjct: 350 QDPMHHQVPLPPNGQMPGFGLLPTPPF----PPMAQPVI------------------PPT 387
Query: 681 PPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQE-KRNSGPSRS 739
PP ++ A + P +P E M + QE KR+ +R
Sbjct: 388 PPVQQPFQASFQAQNEPLTQKPHQQE--------------MEVEQPCIQEVKRHMSDNR- 432
Query: 740 RSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSR 799
KSR RS+SRS R SGS SR SRS SR R R RSRS R R + R
Sbjct: 433 ----KSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKER 488
Query: 800 SRSKSYSP 807
R + P
Sbjct: 489 ERRQKGLP 496
Score = 58.5 bits (140), Expect = 3e-08
Identities = 76/269 (28%), Positives = 100/269 (37%), Gaps = 63/269 (23%)
Query: 355 PPPPAPPPAPAPAPAIPPTTQPD------------DS-----------------KPPIQM 385
PPPP PP P P PP + P+ DS PP+
Sbjct: 743 PPPPITPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQ 802
Query: 386 PGS---SEYEAPG---GVQDPAAAGPRGPGPHDQIPPNKPPWFDQPH----PVAPWGQQQ 435
P S ++ APG G+Q P+ G G P IP +PP PH P+ P
Sbjct: 803 PVSLLGTQGVAPGPVIGLQAPST-GLLGARP-GLIPLQRPPGMPPPHLQRFPLMP----- 855
Query: 436 PPEQPPYPHHQGGPPH-----CPPWNNSH-----EGMWGEQRGDPGWNGQRDAPWNNQPD 485
P PP+ H+G PP PP + G + G PG G P + D
Sbjct: 856 PRPMPPHMMHRGPPPGPGGFAMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPE-D 914
Query: 486 AAWNSQFEGPWNSQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQPPHPHNFN 545
Q P +QP Q+ + Q+PP + P PP QQ PQ + + FN
Sbjct: 915 RDGRQQ---PPQQPQQQPQPQAPQQPQQQQQQQPPPSQQP-PPTQQQPQQFRNDNRQQFN 970
Query: 546 --RFPPRFMQDDFPPRHPFERPPYPHRFD 572
R RF + F R +R Y +R D
Sbjct: 971 SGRDQERFGRRSFGNRVENDRERYGNRND 999
Score = 34.7 bits (78), Expect = 0.42
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 330 QQQQQQQQQQQQLQMPQMEAEVKATPPPPAPPPAP 364
QQ QQ QQQ Q Q PQ + + PPP+ P P
Sbjct: 919 QQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPP 953
Score = 30.8 bits (68), Expect = 6.0
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 78 PAATMPPLPQPPLAPAAPIPPAQGAP-SMDELIQQSQWNLQ 117
P +PP P PP+ P IPP P S+ L+ ++ N +
Sbjct: 735 PPGFLPPGPPPPITPPVSIPPPHTPPISIPNLVSGARGNAE 775
Score = 30.8 bits (68), Expect = 6.0
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 331 QQQQQQQQQQQLQMPQMEAEVKATPPPPAPPPAPAPAP 368
QQ QQQ Q Q Q PQ + + + PPP PP P
Sbjct: 923 QQPQQQPQPQAPQQPQQQQQQQ--PPPSQQPPPTQQQP 958
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 82.4 bits (202), Expect = 2e-15
Identities = 95/306 (31%), Positives = 115/306 (37%), Gaps = 46/306 (15%)
Query: 345 PQMEAEVKATPPPPAPPPAPAP----APAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDP 400
PQ + + PPPP P P P P PP PP S PG Q P
Sbjct: 41 PQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGP 100
Query: 401 AAAG---PRGPGPHDQIPPNKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWNN 457
G P+GP P PP KP Q P P G + P+ PP P GPP +
Sbjct: 101 PPQGGNQPQGPPP----PPGKP----QGPP--PQGGNR-PQGPPPPGKPQGPPPQGDKSR 149
Query: 458 SHEGMWGEQRGDPGWNGQRDAPWNNQPDAAWNSQFEGPWNSQHEQPPWGGGQR----EPP 513
S G+ +G P G NQP Q P + + PP GG++ PP
Sbjct: 150 SPRSPPGKPQGPPPQGG-------NQP------QGPPPPPGKPQGPPPQGGKKPQGPPPP 196
Query: 514 FRMQRPPHFRGPFPPHQQHPQFNQPPHPHNFNR---FPPRFMQDDFPPRHPFERPPYPHR 570
+ Q PP Q P Q P P N+ PP + PP +P P
Sbjct: 197 GKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPP 256
Query: 571 FDYPQGDFPAEMGPPHHHPGHRMPHPGINEHPPWAGPQHPDFGPPPHGFNGQ----PPHM 626
PQG PA+ G R P PG + PP +P PPP G N Q PP
Sbjct: 257 PGKPQGP-PAQGGSKSQ--SARSP-PGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAG 312
Query: 627 RRQGPP 632
+ QGPP
Sbjct: 313 QPQGPP 318
Score = 70.9 bits (172), Expect = 5e-12
Identities = 75/241 (31%), Positives = 93/241 (38%), Gaps = 36/241 (14%)
Query: 345 PQMEAEVKATPPPPAPPPAPAP----APAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDP 400
PQ + + PPPP P P P P PP PP S PG Q P
Sbjct: 102 PQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGP 161
Query: 401 AAAG---PRGPGPHDQIPPNKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWNN 457
G P+GP P PP KP Q P P G ++ P+ PP P GPP +
Sbjct: 162 PPQGGNQPQGPPP----PPGKP----QGPP--PQGGKK-PQGPPPPGKPQGPPPQGDKSR 210
Query: 458 SHEGMWGEQRGDPGWNGQR-----DAPWNNQ--PDAAWNSQFEGPWNSQHEQPPWGGGQ- 509
S + G+ +G P G + P Q P N P + + PP GG
Sbjct: 211 SSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSK 270
Query: 510 ----REPPFRMQRPP-----HFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRH 560
R PP + Q PP + +GP PP +PQ Q P P + PPR Q P R
Sbjct: 271 SQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP-PAGQPQGPPRPPQGGRPSRP 329
Query: 561 P 561
P
Sbjct: 330 P 330
Score = 42.0 bits (97), Expect = 0.003
Identities = 41/134 (30%), Positives = 46/134 (34%), Gaps = 18/134 (13%)
Query: 331 QQQQQQQQQQQLQMPQMEAEVKATPPPPAPPP-----APAPAPAIPPTTQPDDSKP--PI 383
Q + + Q PQ P PPP P P P P KP P
Sbjct: 205 QGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP 264
Query: 384 QMPGSSEYEA---PGGVQDPAAAGPRGPGPHDQIPPNKPPWFDQPHPVAPWGQQQPPEQP 440
GS A PG Q P P+ G + Q PP Q P GQ Q P +P
Sbjct: 265 AQGGSKSQSARSPPGKPQGP----PQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRP 320
Query: 441 PYPHHQGGPPHCPP 454
P QGG P PP
Sbjct: 321 P----QGGRPSRPP 330
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 82.4 bits (202), Expect = 2e-15
Identities = 95/307 (30%), Positives = 115/307 (37%), Gaps = 65/307 (21%)
Query: 345 PQMEAEVKATPPPPAPP-------------PAPAPA-PAIPPTTQPDDSKPPIQMPGSSE 390
PQ + + TPPPP P P P P P PP + S+ P PG E
Sbjct: 41 PQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPE 100
Query: 391 YEAPGGVQDPAAAGPRGPGPHDQIPPNKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGPP 450
+ P G G Q PP +P +P P G Q PP P GPP
Sbjct: 101 GQPPQG------------GNQSQGPPPRP---GKPEGPPPQGGNQSQGPPPRPGKPEGPP 145
Query: 451 HCPPWNNSHEGMWGEQRGDPGWNGQRDAPWNNQPDAAWNSQFEGPWNSQHEQPPWGGGQR 510
P N + +G P G+ + P P SQ P + E PP GG +
Sbjct: 146 --PQGGN-------QSQGPPPRPGKPEGP---PPQGGNQSQGPPPHPGKPEGPPPQGGNQ 193
Query: 511 E--PPFRMQRPPHFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYP 568
PP R +P GP PP + PP P PP Q P+ P PP+P
Sbjct: 194 SQGPPPRPGKP---EGP-PPQGGNQSQGPPPRPGK-PEGPPS--QGGNKPQGP---PPHP 243
Query: 569 HRFDYPQGDFPAEMGPPHHHPGHRMPHPGINEHPPWAG--PQHPDFGPPPHGFNGQPPHM 626
+ PQG P E P R P PG + PP G PQ P PPP G PP
Sbjct: 244 GK---PQGPPPQEGNKPQ-----RPPPPGRPQGPPPPGGNPQQPL--PPPAGKPQGPPPP 293
Query: 627 RRQGPPH 633
+ G PH
Sbjct: 294 PQGGRPH 300
Score = 52.4 bits (124), Expect = 2e-06
Identities = 41/123 (33%), Positives = 47/123 (38%), Gaps = 21/123 (17%)
Query: 352 KATPPPP-------APPPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAA-- 402
K PPP PPP P P PP + S+ P PG E G P
Sbjct: 182 KPEGPPPQGGNQSQGPPPRPGK-PEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPP 240
Query: 403 ---AGPRGPGPHDQIPPNKPPWFDQPH-PVAPWGQQQPPEQPPY-------PHHQGGPPH 451
P+GP P + P +PP +P P P G Q P PP P QGG PH
Sbjct: 241 PHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPH 300
Query: 452 CPP 454
PP
Sbjct: 301 RPP 303
>gi|9558733 transformer-2 alpha [Homo sapiens]
Length = 282
Score = 80.9 bits (198), Expect = 5e-15
Identities = 60/120 (50%), Positives = 73/120 (60%), Gaps = 13/120 (10%)
Query: 727 KGQEKRNSG--PSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSR 784
+G+E R+ P+ + +R KS RS SRS SR SK S S+SRSRS+S RSRSR
Sbjct: 10 EGRESRSQSKSPTGTPARVKSESRSGSRSPSRVSKHSESHSRSRSKS------RSRSRRH 63
Query: 785 SRSRSSRSRSRSQS---RSRSKSYSPG-RRRRSRSRSPTPPSSAGLGSNSAPPIPDSRLG 840
S R +RSRS S S RSRS+SY+P RRRRSRS SP GS A P P++ LG
Sbjct: 64 SHRRYTRSRSHSHSHRRRSRSRSYTPEYRRRRSRSHSPMSNRRRHTGSR-ANPDPNTCLG 122
Score = 53.1 bits (126), Expect = 1e-06
Identities = 36/102 (35%), Positives = 47/102 (46%)
Query: 701 RPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKS 760
R S+ G +++ R+ R S SRSRSKSR RS S+ R ++S
Sbjct: 12 RESRSQSKSPTGTPARVKSESRSGSRSPSRVSKHSESHSRSRSKSRSRSRRHSHRRYTRS 71
Query: 761 SGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRS 802
R RS SRSY+ R RSRS S S R + SR+
Sbjct: 72 RSHSHSHRRRSRSRSYTPEYRRRRSRSHSPMSNRRRHTGSRA 113
Score = 52.0 bits (123), Expect = 3e-06
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 16/88 (18%)
Query: 749 SSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSR-------SSRSRSRSQSRS- 800
S N+ + S S S+S + + +R S SRS SRS SR SRSRS+S+SRS
Sbjct: 2 SDVEENNFEGRESRSQSKSPTGTPARVKSESRSGSRSPSRVSKHSESHSRSRSKSRSRSR 61
Query: 801 --------RSKSYSPGRRRRSRSRSPTP 820
RS+S+S RRRSRSRS TP
Sbjct: 62 RHSHRRYTRSRSHSHSHRRRSRSRSYTP 89
Score = 31.2 bits (69), Expect = 4.6
Identities = 18/26 (69%), Positives = 18/26 (69%)
Query: 766 RSRSRSCSRSYSRSRSRSRSRSRSSR 791
R R RS S YSR RSRSRSRS S R
Sbjct: 255 RYRRRSPSPYYSRYRSRSRSRSYSPR 280
Score = 30.8 bits (68), Expect = 6.0
Identities = 24/54 (44%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 762 GSYSRSRSRSCSRSYSRSRSRS-----RSRSRS-SRSRSRSQSRSRSKSYSPGR 809
G R R R Y R R R R RS S SR +SRSRS+SYSP R
Sbjct: 228 GGGGRRRDSYYDRGYDRGYDRYEDYDYRYRRRSPSPYYSRYRSRSRSRSYSPRR 281
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 80.1 bits (196), Expect = 9e-15
Identities = 62/142 (43%), Positives = 77/142 (54%), Gaps = 21/142 (14%)
Query: 698 SHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSR-----SKSRGRSSSR 752
S D+ R +NG + R +R++ + R SRSRSR S+SR R SR
Sbjct: 35 SSDKGRERLNSSENG-------EDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSR 87
Query: 753 SNSRSSKSSGSYSRSRSRSCSRSYSRSRS-RSRSRSRS-----SRSRSRSQSRSRSKS-- 804
S SR K S S SR R +S SRS R R RSRSRSRS +RSRSR++SRSR +
Sbjct: 88 SRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKR 147
Query: 805 -YSPGRRRRSRSRSPTPPSSAG 825
P R RS SR+P+PP G
Sbjct: 148 IEKPRRFSRSLSRTPSPPPFRG 169
Score = 66.2 bits (160), Expect = 1e-10
Identities = 44/104 (42%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 719 AKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSR 778
+K ++ +S R R S G + R S S+SRSRSR R SR
Sbjct: 21 SKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRE-RRHRSR 79
Query: 779 SRSRSRSRSRS-----SRSRSRSQSRSRSKSYSPGRRRRSRSRS 817
SR R +SRSRS SRSRSR + +SRS+S RR RSRSRS
Sbjct: 80 SRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRS 123
Score = 58.2 bits (139), Expect = 4e-08
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 722 RARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRS 781
+ RR + ++K + K R SS++ + + R SR S SRS
Sbjct: 10 QGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRS 69
Query: 782 RSRSRSRSSRSRSRSQSRSRSKSYSPGR-----RRRSRSRS 817
RSR R SRSR R +SRSRS+ R R++SRSRS
Sbjct: 70 RSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRS 110
Score = 44.3 bits (103), Expect = 5e-04
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 698 SHDRPRNSEGWEQNGLYEFFRAKMRARRRK---------------GQEKRNSGPSRSRSR 742
SH R R+ E ++ E +++ R+R RK +E++ SRSRSR
Sbjct: 65 SHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSR 124
Query: 743 SKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSS 790
S+ R R+ SRS +RS + R SRS SR+ S R R++
Sbjct: 125 SRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNT 172
Score = 42.0 bits (97), Expect = 0.003
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 718 RAKMRARRRKGQEK-RNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSY 776
R K R+R R+ + + R+ SRSR R ++R RS +RS SR K R SRS SR+
Sbjct: 103 RKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTP 162
Query: 777 SRSRSRSRSRSRSSR 791
S R R+ + ++
Sbjct: 163 SPPPFRGRNTAMDAQ 177
Score = 33.1 bits (74), Expect = 1.2
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 720 KMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRS------RSRSCS 773
K R R R R+ +RSRSR++SR R + + + S S SR+ R R+ +
Sbjct: 114 KRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTA 173
Query: 774 RSYSRSRSRSRSRSRSSRSRSRSQSRSRSK 803
+ +R R++ + + + + K
Sbjct: 174 MDAQEALARRLERAKKLQEQREKEMVEKQK 203
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 80.1 bits (196), Expect = 9e-15
Identities = 62/142 (43%), Positives = 77/142 (54%), Gaps = 21/142 (14%)
Query: 698 SHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSR-----SKSRGRSSSR 752
S D+ R +NG + R +R++ + R SRSRSR S+SR R SR
Sbjct: 94 SSDKGRERLNSSENG-------EDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSR 146
Query: 753 SNSRSSKSSGSYSRSRSRSCSRSYSRSRS-RSRSRSRS-----SRSRSRSQSRSRSKS-- 804
S SR K S S SR R +S SRS R R RSRSRSRS +RSRSR++SRSR +
Sbjct: 147 SRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKR 206
Query: 805 -YSPGRRRRSRSRSPTPPSSAG 825
P R RS SR+P+PP G
Sbjct: 207 IEKPRRFSRSLSRTPSPPPFRG 228
Score = 66.2 bits (160), Expect = 1e-10
Identities = 44/104 (42%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 719 AKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSR 778
+K ++ +S R R S G + R S S+SRSRSR R SR
Sbjct: 80 SKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRE-RRHRSR 138
Query: 779 SRSRSRSRSRS-----SRSRSRSQSRSRSKSYSPGRRRRSRSRS 817
SR R +SRSRS SRSRSR + +SRS+S RR RSRSRS
Sbjct: 139 SRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRS 182
Score = 62.8 bits (151), Expect = 1e-09
Identities = 45/132 (34%), Positives = 60/132 (45%), Gaps = 28/132 (21%)
Query: 714 YEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNS------------------ 755
+ + R++ R+R RK + RSRSRSK R S+ S
Sbjct: 38 HHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDK 97
Query: 756 -----RSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGR- 809
SS++ + + R SR S SRSRSR R SRSR R +SRSRS+ R
Sbjct: 98 GRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRS 157
Query: 810 ----RRRSRSRS 817
R++SRSRS
Sbjct: 158 RSRERKKSRSRS 169
Score = 50.4 bits (119), Expect = 7e-06
Identities = 45/141 (31%), Positives = 55/141 (39%), Gaps = 48/141 (34%)
Query: 724 RRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRS------------ 771
R +K ++ S R+ SR RS SR R S + G RSRSRS
Sbjct: 20 RDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRHESKDKS 79
Query: 772 -----------------------------------CSRSYSRSRSRSRSRSRSSRSRSRS 796
R SR RS SRSRSR R RSRS
Sbjct: 80 SKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRS 139
Query: 797 QSRSRSKSYSPGRRRRSRSRS 817
+ R +S+S S R++SRSRS
Sbjct: 140 RERKKSRSRS-RERKKSRSRS 159
Score = 44.3 bits (103), Expect = 5e-04
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 15/108 (13%)
Query: 698 SHDRPRNSEGWEQNGLYEFFRAKMRARRRK---------------GQEKRNSGPSRSRSR 742
SH R R+ E ++ E +++ R+R RK +E++ SRSRSR
Sbjct: 124 SHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSR 183
Query: 743 SKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSS 790
S+ R R+ SRS +RS + R SRS SR+ S R R++
Sbjct: 184 SRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNT 231
Score = 42.0 bits (97), Expect = 0.003
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 718 RAKMRARRRKGQEK-RNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSY 776
R K R+R R+ + + R+ SRSR R ++R RS +RS SR K R SRS SR+
Sbjct: 162 RKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTP 221
Query: 777 SRSRSRSRSRSRSSR 791
S R R+ + ++
Sbjct: 222 SPPPFRGRNTAMDAQ 236
Score = 39.3 bits (90), Expect = 0.017
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 726 RKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRS 785
R G + P R + + +S S R+ S YSRSRSRS R + +S +
Sbjct: 8 RDGLAPEKTSPDRDKKKEQSEVSVSPRA------SKHHYSRSRSRSRER---KRKSDNEG 58
Query: 786 RSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAG 825
R SRSRS+ R SK S + + S G
Sbjct: 59 RKHRSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKG 98
Score = 33.1 bits (74), Expect = 1.2
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 720 KMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRS------RSRSCS 773
K R R R R+ +RSRSR++SR R + + + S S SR+ R R+ +
Sbjct: 173 KRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTA 232
Query: 774 RSYSRSRSRSRSRSRSSRSRSRSQSRSRSK 803
+ +R R++ + + + + K
Sbjct: 233 MDAQEALARRLERAKKLQEQREKEMVEKQK 262
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo
sapiens]
Length = 1792
Score = 79.0 bits (193), Expect = 2e-14
Identities = 92/256 (35%), Positives = 112/256 (43%), Gaps = 59/256 (23%)
Query: 579 PAEMGPPHHHPGHRMP-HPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPPHINHD 637
P + PP P H +P PG+ PP PQ P PPP G++ PP PP
Sbjct: 561 PPPLYPP---PPHTLPLPPGVP--PPQFSPQFPPGQPPPAGYSVPPPGF----PP----- 606
Query: 638 DPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVEAFYSPP 697
PA L P V + PP + E FY
Sbjct: 607 ------------APANLSTPWVSSGVQTAHSNTIPTTQAPP---------LSREEFYR-- 643
Query: 698 SHDRPRNSEGWEQNGLYEFFR--AKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNS 755
R E +++ L EF AK +K Q++R S SRS+S G S SRS+
Sbjct: 644 -EQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRR--SFSRSKSPYSGSSYSRSSY 700
Query: 756 RSSKS-SGSYSRSRSRSCSRSYSRSRSRS-----------RSRSRSSRSRSRSQSRSRSK 803
SKS SGS +RSRS SRS+SRS SRS R +SR+ RSRSRS RS+
Sbjct: 701 TYSKSRSGS---TRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSR 757
Query: 804 SYSPG-RRRRSRSRSP 818
S SP RR SRSRSP
Sbjct: 758 SRSPPYRRYHSRSRSP 773
Score = 50.1 bits (118), Expect = 1e-05
Identities = 71/249 (28%), Positives = 98/249 (39%), Gaps = 61/249 (24%)
Query: 583 GPPHHHPGHRMPHPGINEHPPWAG-PQHPDFGPPPHGFNGQPPHMRRQGPPHINHDDPSL 641
G H R P + P + P P + PPPH PP + PP + P
Sbjct: 535 GRHHSERSQRTQGPSLPATPVFVPVPPPPLYPPPPHTLP-LPPGVP---PPQFS---PQF 587
Query: 642 VPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAA------VEAFYS 695
P P PAG P PP PP+ L+ V+ +S
Sbjct: 588 PPGQPP---PAGYSVP-------------------PPGFPPAPANLSTPWVSSGVQTAHS 625
Query: 696 ---PPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSR 752
P + P + E EF+R + RR K +EK+ S + + +
Sbjct: 626 NTIPTTQAPPLSRE--------EFYREQ---RRLKEEEKKKS---KLDEFTNDFAKELME 671
Query: 753 SNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRR 812
+ S+SRS+S SYSRS S + S+SRS +RSRS SRS S+S+S
Sbjct: 672 YKKIQKERRRSFSRSKSPYSGSSYSRS-SYTYSKSRSGSTRSRSYSRSFSRSHS------ 724
Query: 813 SRSRSPTPP 821
RS S +PP
Sbjct: 725 -RSYSRSPP 732
Score = 33.5 bits (75), Expect = 0.93
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 735 GPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRS 794
G SR++S S S S S SRS SGS +RS S S S + S+ + + + + +
Sbjct: 1686 GISRNQSHS-----SPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKK 1740
Query: 795 RSQSRSRSK 803
+ + K
Sbjct: 1741 HKKHKKHKK 1749
Score = 32.0 bits (71), Expect = 2.7
Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 330 QQQQQQQQQQQQLQMPQMEAEVKATPPPPAPPPAPAPAPAIPPTTQPDDSKP--PIQMPG 387
+ ++ Q+ Q +P V PPP PPP P P +PP P P P P
Sbjct: 536 RHHSERSQRTQGPSLPATPVFVPVPPPPLYPPP-PHTLP-LPPGVPPPQFSPQFPPGQPP 593
Query: 388 SSEYEAPGGVQDPAAAGPRGP 408
+ Y P PA A P
Sbjct: 594 PAGYSVPPPGFPPAPANLSTP 614
Score = 30.8 bits (68), Expect = 6.0
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 8/46 (17%)
Query: 357 PPAPPPAPAPAPAIPPTTQPDDSKP------PIQMP--GSSEYEAP 394
PP PPP P P P I QP P P+ +P SS + AP
Sbjct: 337 PPPPPPIPPPRPLIQRNLQPLMRSPISRQQDPLMIPVTSSSTHPAP 382
Score = 30.8 bits (68), Expect = 6.0
Identities = 16/88 (18%), Positives = 38/88 (43%)
Query: 729 QEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSR 788
+ + +S PS S SRS S S +RS+S S+ S+ S + + + + + +
Sbjct: 1689 RNQSHSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHK 1748
Query: 789 SSRSRSRSQSRSRSKSYSPGRRRRSRSR 816
+S+ + + ++++ +
Sbjct: 1749 KHAGTEVELEKSQKHKHKKKKSKKNKDK 1776
>gi|86991440 splicing factor, arginine/serine-rich 5 [Homo sapiens]
Length = 272
Score = 79.0 bits (193), Expect = 2e-14
Identities = 51/82 (62%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 737 SRSRSRSKSRGRSSSRSNSRS-SKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSR 795
SRSRSRS+SR RSSSRS SRS S+S SYSRSRSRS SRS S+SRS SRS +
Sbjct: 184 SRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSKSRSVSRSPVPEKSQKRG 243
Query: 796 SQSRSRSKSYSPGRRRRSRSRS 817
S SRS+S + +R RSRSRS
Sbjct: 244 SSSRSKSPASVDRQRSRSRSRS 265
Score = 73.2 bits (178), Expect = 1e-12
Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 744 KSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSK 803
K G+ + + + S +SRSRSRS SR+ S SRSRSRSRSRS +S SRS+SRSRS+
Sbjct: 163 KLSGKEINGRKIKLIEGSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSR 222
Query: 804 SYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDS 837
S S + RS SRSP P S GS+S P S
Sbjct: 223 SRS---KSRSVSRSPVPEKSQKRGSSSRSKSPAS 253
Score = 43.5 bits (101), Expect = 0.001
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 17/74 (22%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRS-----SKSSGSYSRS----- 767
R+ R+R R R S SRSRSRS+SR RS SRS SRS S+ GS SRS
Sbjct: 195 RSSSRSRSRSRSRSRKSY-SRSRSRSRSRSRSKSRSVSRSPVPEKSQKRGSSSRSKSPAS 253
Query: 768 ------RSRSCSRS 775
RSRS SRS
Sbjct: 254 VDRQRSRSRSRSRS 267
>gi|86991438 splicing factor, arginine/serine-rich 5 [Homo sapiens]
Length = 272
Score = 79.0 bits (193), Expect = 2e-14
Identities = 51/82 (62%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 737 SRSRSRSKSRGRSSSRSNSRS-SKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSR 795
SRSRSRS+SR RSSSRS SRS S+S SYSRSRSRS SRS S+SRS SRS +
Sbjct: 184 SRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSKSRSVSRSPVPEKSQKRG 243
Query: 796 SQSRSRSKSYSPGRRRRSRSRS 817
S SRS+S + +R RSRSRS
Sbjct: 244 SSSRSKSPASVDRQRSRSRSRS 265
Score = 73.2 bits (178), Expect = 1e-12
Identities = 48/94 (51%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 744 KSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSK 803
K G+ + + + S +SRSRSRS SR+ S SRSRSRSRSRS +S SRS+SRSRS+
Sbjct: 163 KLSGKEINGRKIKLIEGSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSR 222
Query: 804 SYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDS 837
S S + RS SRSP P S GS+S P S
Sbjct: 223 SRS---KSRSVSRSPVPEKSQKRGSSSRSKSPAS 253
Score = 43.5 bits (101), Expect = 0.001
Identities = 36/74 (48%), Positives = 40/74 (54%), Gaps = 17/74 (22%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRS-----SKSSGSYSRS----- 767
R+ R+R R R S SRSRSRS+SR RS SRS SRS S+ GS SRS
Sbjct: 195 RSSSRSRSRSRSRSRKSY-SRSRSRSRSRSRSKSRSVSRSPVPEKSQKRGSSSRSKSPAS 253
Query: 768 ------RSRSCSRS 775
RSRS SRS
Sbjct: 254 VDRQRSRSRSRSRS 267
>gi|50083281 KIAA1853 protein [Homo sapiens]
Length = 611
Score = 79.0 bits (193), Expect = 2e-14
Identities = 70/175 (40%), Positives = 85/175 (48%), Gaps = 22/175 (12%)
Query: 678 PPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKG-----QEKR 732
PP S + + YSP P+ SE Q R + RARRR+ +++R
Sbjct: 444 PPSRSSRSRRSPSYSRYSPSRERDPKYSEKDSQQ------RERERARRRRRSYSPMRKRR 497
Query: 733 NSGPSRSRSRSKSRGR---------SSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRS 783
PS +R + R S S S S SS SS YS S SRS SRSYSRSRSRS
Sbjct: 498 RDSPSHLEARRITSARKRPIPYYRPSPSSSGSLSSTSSW-YSSSSSRSASRSYSRSRSRS 556
Query: 784 RSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSR 838
RSR RS R+R+ S S SRS S R RSRSRS + S +SA +R
Sbjct: 557 RSRRRS-RTRTSSSSSSRSPSPGSRSRSRSRSRSRSRSRSQSRSYSSADSYSSTR 610
Score = 58.2 bits (139), Expect = 4e-08
Identities = 54/142 (38%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 722 RARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRS 781
RA R Q + S RS SRS S SS+S RS S S SR RS S SR YS SR
Sbjct: 411 RASPRYTQSRSTSSEKRSYSRSPSY---SSKSGKRSPPSRSSRSR-RSPSYSR-YSPSRE 465
Query: 782 RSRSRS-RSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSRLG 840
R S + S+ R R ++R R +SYSP R+R R SP+ + + S PIP R
Sbjct: 466 RDPKYSEKDSQQRERERARRRRRSYSPMRKR--RRDSPSHLEARRITSARKRPIPYYRPS 523
Query: 841 EENKGHQMLVKMGWSGSGGLGA 862
+ G +S S A
Sbjct: 524 PSSSGSLSSTSSWYSSSSSRSA 545
Score = 52.8 bits (125), Expect = 1e-06
Identities = 55/148 (37%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 695 SPPSHD-RPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRS 753
SPPS R R S + + + R R K EK + R R+R + R S R
Sbjct: 443 SPPSRSSRSRRSPSYSRY-------SPSRERDPKYSEKDSQQRERERARRRRRSYSPMRK 495
Query: 754 NSRSSKSSGSYSR--SRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGR-R 810
R S S R S + Y S S S S S +S S S SRS S+SYS R R
Sbjct: 496 RRRDSPSHLEARRITSARKRPIPYYRPSPSSSGSLSSTSSWYSSSSSRSASRSYSRSRSR 555
Query: 811 RRSRSRSPTPPSSAGLGSNSAPPIPDSR 838
RSR RS T SS+ S+S P P SR
Sbjct: 556 SRSRRRSRTRTSSS---SSSRSPSPGSR 580
Score = 49.3 bits (116), Expect = 2e-05
Identities = 42/133 (31%), Positives = 55/133 (41%), Gaps = 17/133 (12%)
Query: 718 RAKMRARRRKGQEKRNSGPS----RSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCS 773
+ K ++ R+K + + PS + + SK R S S R SS S+ R
Sbjct: 110 KKKKKSTRKKRRRSSSYSPSPVKKKKKKSSKKHKRRRSFSKKRRHSSSSPKSKRRDEKRH 169
Query: 774 RSYSRSRSRSRSRSRSSRSRSRSQS--------RSRSKSYSP-----GRRRRSRSRSPTP 820
+ SRSR R R R R SRSQS SR + SP RRR SR S T
Sbjct: 170 KKQSRSRPRKSHRHRHHRCPSRSQSSESRPSSCESRHRGRSPEEGQKSRRRHSRRCSKTL 229
Query: 821 PSSAGLGSNSAPP 833
+ +S PP
Sbjct: 230 CKDSPEAQSSRPP 242
Score = 44.3 bits (103), Expect = 5e-04
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 730 EKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRS 789
+K + P SR + K + +S+ + RSS S S + + + S+ + R RS S+ R S
Sbjct: 97 DKDLTPPPSSRGKKKKK-KSTRKKRRRSSSYSPSPVKKKKKKSSKKHKRRRSFSKKRRHS 155
Query: 790 SRS-RSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSR 838
S S +S+ + R K S R R+S S S S P +SR
Sbjct: 156 SSSPKSKRRDEKRHKKQSRSRPRKSHRHRHHRCPSRSQSSESRPSSCESR 205
Score = 43.5 bits (101), Expect = 0.001
Identities = 39/95 (41%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 730 EKRNSGPSRSRSRS-KSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSR 788
+K + PS +RS K RSSS +++RSS S SRS + S Y++SRS S +
Sbjct: 372 KKSSLVPSTARSSPMKGCSRSSSYASTRSSSHS---SRSPNPRASPRYTQSRSTSSEKRS 428
Query: 789 SSRSRS-RSQSRSRSKSYSPGRRRRSRSRSPTPPS 822
SRS S S+S RS R RRS S S PS
Sbjct: 429 YSRSPSYSSKSGKRSPPSRSSRSRRSPSYSRYSPS 463
Score = 42.4 bits (98), Expect = 0.002
Identities = 43/147 (29%), Positives = 55/147 (37%), Gaps = 33/147 (22%)
Query: 719 AKMRARRRKGQEKRNSGPS----------RSRSRSKSRGRSSSRSNSRSSKSSGSYSRSR 768
+K RRR +KR S R + +S+SR R S R S S SR
Sbjct: 139 SKKHKRRRSFSKKRRHSSSSPKSKRRDEKRHKKQSRSRPRKSHRHRHHRCPSRSQSSESR 198
Query: 769 SRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPP------- 821
SC SR R RS +SR R SR SK+ SR P+ P
Sbjct: 199 PSSC-----ESRHRGRSPEEGQKSR-RRHSRRCSKTLCKDSPEAQSSRPPSQPLQMLGYL 252
Query: 822 ----------SSAGLGSNSAPPIPDSR 838
S+A L + +A P+ SR
Sbjct: 253 SARGVITGSGSAADLFTKTASPLTTSR 279
Score = 40.0 bits (92), Expect = 0.010
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 727 KGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSR 786
+G++K+ + R RS S S S + KSS + R RS S R +S S +S+ R
Sbjct: 107 RGKKKKKKSTRKKRRRSSSY--SPSPVKKKKKKSSKKHKRRRSFSKKRRHSSSSPKSKRR 164
Query: 787 SRS---SRSRSRSQSRSRSKSY-SPGRRRRSRSR 816
+SRSR + R + + P R + S SR
Sbjct: 165 DEKRHKKQSRSRPRKSHRHRHHRCPSRSQSSESR 198
Score = 40.0 bits (92), Expect = 0.010
Identities = 50/181 (27%), Positives = 68/181 (37%), Gaps = 40/181 (22%)
Query: 695 SPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSN 754
SP + R R+ E N + + R +GQEK + S+SR + G +S N
Sbjct: 273 SPLTTSRGRSQEYDSGNDTSSPPSTQTSSARSRGQEKGSPSGGLSKSRELNSGNTSDSGN 332
Query: 755 S---------------RSSKSSGSYSRSRSRSC--------------------SRSYSRS 779
S S S G SR C + SRS
Sbjct: 333 SFTTSSPQNKGAMLENLSPTSRGRESRGFQSPCLECAEVKKSSLVPSTARSSPMKGCSRS 392
Query: 780 RSR--SRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDS 837
S +RS S SSRS + S ++S S +RS SRSP+ S +G +PP S
Sbjct: 393 SSYASTRSSSHSSRSPNPRASPRYTQSRSTSSEKRSYSRSPSYSSKSG---KRSPPSRSS 449
Query: 838 R 838
R
Sbjct: 450 R 450
Score = 33.1 bits (74), Expect = 1.2
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 747 GRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYS 806
G S +++ G+ S R ++C R +R S S + S+ + + K +
Sbjct: 58 GPSEKLGQHLATEPLGTNSWERDKTC-RELGATRGHSASHDKDLTPPPSSRGKKKKKKST 116
Query: 807 PGRRRRSRSRSPTP 820
+RRRS S SP+P
Sbjct: 117 RKKRRRSSSYSPSP 130
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 77.0 bits (188), Expect = 7e-14
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 12/132 (9%)
Query: 697 PSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSR 756
P R R+++ W ++ + R + R+ +R G + + R RSRS RGRS SRS +
Sbjct: 511 PQWRRSRSAQRWGRSRSPQR-RGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPAT 569
Query: 757 SSKS----------SGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYS 806
+S S S + +R RS SR+ +R RSRSR+ +R RSRSR+ +R RS++ S
Sbjct: 570 RGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRS 629
Query: 807 PGRRRRSRSRSP 818
P RRRSRSRSP
Sbjct: 630 P-VRRRSRSRSP 640
Score = 74.3 bits (181), Expect = 5e-13
Identities = 61/158 (38%), Positives = 81/158 (51%), Gaps = 21/158 (13%)
Query: 701 RPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKS 760
R R G+ ++ +RRR+G+ R SR RSRS++ RS SR+S +
Sbjct: 1813 RRRGGSGYHSRSPARQESSRTSSRRRRGRS-RTPPTSRKRSRSRTSPAPWKRSRSRASPA 1871
Query: 761 SGSYSRSRSRSCSRSYSRSR----SRSRSRSRSSRSRSRSQSR----SRSKSYS---PGR 809
+ SRSR+ SR SRSR SR RSRSR+S +R RS+SR SR +S S P
Sbjct: 1872 THRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVT 1931
Query: 810 RRRSRSRSP---------TPPSSAGLGSNSAPPIPDSR 838
RRRSRSR+P TPP + + PP+ R
Sbjct: 1932 RRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRR 1969
Score = 72.0 bits (175), Expect = 2e-12
Identities = 50/117 (42%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSG-SYSRS---RSRSCS 773
R + R+R + R P R RSRS+S R S RS SR+ G S SR+ R RS S
Sbjct: 612 RGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRS 671
Query: 774 RSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNS 830
R+ +R RSRSR+ + R RSRS++ R +S S RR RS S TP GS+S
Sbjct: 672 RTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSS 728
Score = 71.2 bits (173), Expect = 4e-12
Identities = 63/162 (38%), Positives = 87/162 (53%), Gaps = 26/162 (16%)
Query: 695 SPPSHDRPRNSE--GWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKS---RGRS 749
SP R R+ + GW ++ + R + R+ RR G+ S +R RSRS++ RGRS
Sbjct: 527 SPQRRGRSRSPQRPGWSRSRNTQR-RGRSRSARR-GRSHSRSPATRGRSRSRTPARRGRS 584
Query: 750 SSRSNSRSSKSSGSYSRSRSRSCS-----RSYSRSRSRSRSRSRSS---RSRSRSQSR-- 799
SR+ +R S + +R RSRS + RS SR+ +R RSR+RS RSRSRS +R
Sbjct: 585 RSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRS 644
Query: 800 SRSKSYSPGRR---------RRSRSRSPTPPSSAGLGSNSAP 832
RS+S +P RR RR RSRS TP +G + P
Sbjct: 645 GRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTP 686
Score = 70.9 bits (172), Expect = 5e-12
Identities = 58/157 (36%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 668 PLDPKDIRLPPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRK 727
P PK P P P S R +++ + SH R + + R++ A ++
Sbjct: 438 PESPK----PAPAPGSHREISSSPTSKNR-SHGRAKRDKSHSHTPSRRMGRSRSPATAKR 492
Query: 728 GQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSR-SYSRSRS---RS 783
G+ + + R SRS+S SRS R +S R RSRS R +SRSR+ R
Sbjct: 493 GRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRG 552
Query: 784 RSRS-RSSRSRSRSQS-RSRSKSYSPGRRRRSRSRSP 818
RSRS R RS SRS + R RS+S +P RR RSRSR+P
Sbjct: 553 RSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTP 589
Score = 70.1 bits (170), Expect = 9e-12
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 699 HDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRS- 757
H R R+ + + R++ RR + + + G SRSR+ + RGRS S RS
Sbjct: 505 HSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQR-RGRSRSARRGRSH 563
Query: 758 SKSSGSYSRSRSRS-CSRSYSRSRSRSRSRSRS---SRSRSRSQS---RSRSKSYSPGRR 810
S+S + RSRSR+ R SRSR+ +R RSRS +R RSRS++ R RS+S +P RR
Sbjct: 564 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARR 623
Query: 811 R-------RSRSRSPTPPSSAGLGSNSAP 832
R R RSRS +P +G + P
Sbjct: 624 RSRTRSPVRRRSRSRSPARRSGRSRSRTP 652
Score = 70.1 bits (170), Expect = 9e-12
Identities = 62/169 (36%), Positives = 83/169 (49%), Gaps = 26/169 (15%)
Query: 675 RLPPPMPPS---ERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEK 731
R P P P R + E + DR +S+ + R+++ RRR G
Sbjct: 1761 RSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGY 1820
Query: 732 RNSGPSRS--------RSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSR- 782
+ P+R R R +SR +SR SRS S + RSRSR+ ++ RSRSR
Sbjct: 1821 HSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRT 1880
Query: 783 ---SRSRSRS-----SRSRSRSQS-----RSRSKSYSPGRRRRSRSRSP 818
SR RSRS SR RSRS++ RSRS++ SP RRRSRSR+P
Sbjct: 1881 PLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRA-SPVSRRRSRSRTP 1928
Score = 68.2 bits (165), Expect = 3e-11
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYS 777
R++ R R+G+ + + R RSRS++ R S RS SR+ G RSRSR+ R S
Sbjct: 646 RSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRG---RSRSRTPRRGRS 702
Query: 778 RSRS---RSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPI 834
RSRS R RS SR+ + R RS S S K+ S +RRSRS S + + S + +
Sbjct: 703 RSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSL 762
Query: 835 PDSR 838
R
Sbjct: 763 SSPR 766
Score = 66.2 bits (160), Expect = 1e-10
Identities = 61/154 (39%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 695 SPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRS---KSRGRSSS 751
+PP H R + E +++ RRR R SR R RS K RG S
Sbjct: 1720 TPPRHRRSPSVSSPEPAE-----KSRSSRRRRSASSPRTKTTSR-RGRSPSPKPRGLQRS 1773
Query: 752 RSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSR-------SRSQSRSRSKS 804
RS SR K+ + R RS S S+S SR R RSRSRSR +R R SRS +R S S
Sbjct: 1774 RSRSRREKTRTTRRRDRSGS-SQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQES-S 1831
Query: 805 YSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSR 838
+ RRRR RSR TPP+S + P P R
Sbjct: 1832 RTSSRRRRGRSR--TPPTSRKRSRSRTSPAPWKR 1863
Score = 64.3 bits (155), Expect = 5e-10
Identities = 56/151 (37%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 701 RPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKS 760
R R+ G Q+ R++ R+R + + + SRS +R +S SS R RS
Sbjct: 1786 RRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTP 1845
Query: 761 SGSYSRSRSRSCSRSYSRSRSRS------RSRSRS---SRSRSRSQ----SRSRSKSYSP 807
S RSRSR+ + RSRSR+ RSRSR+ SR RSRS+ SR RS+S +
Sbjct: 1846 PTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTS 1905
Query: 808 GRRRRSRSRSPTPPSSAGLGSNSAPPIPDSR 838
RRRSRSR+ P S + PP+ R
Sbjct: 1906 VTRRRSRSRA--SPVSRRRSRSRTPPVTRRR 1934
Score = 63.2 bits (152), Expect = 1e-09
Identities = 53/133 (39%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRS-----RSKSR-----GRSSSRSNSRSSKSSGSYSRS 767
R+ +R R R R SG SRSR+ RS+SR GRS SR+ +R S S S + +
Sbjct: 628 RSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPA 687
Query: 768 R-SRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGL 826
R RS SR+ R RSRSRS R RS SR+ R S R+ +SR+ S
Sbjct: 688 RRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRT------SQRRS 741
Query: 827 GSNSAPPIPDSRL 839
SNS+P + SR+
Sbjct: 742 RSNSSPEMKKSRI 754
Score = 63.2 bits (152), Expect = 1e-09
Identities = 54/158 (34%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 681 PPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSR 740
PP+ R + +P R R S + R++ R+ R S SR R
Sbjct: 1845 PPTSRKRSRSRTSPAPWKRSRSRASPATHRRS-----RSRTPLISRRRSRSRTSPVSRRR 1899
Query: 741 SRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRS 800
SRS++ S +R SRS S S RSRSR+ + RSRSR+ + R SRSR+ +R
Sbjct: 1900 SRSRT---SVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR 1956
Query: 801 RSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSR 838
RS+S +P RR RSRS T P + + P+ R
Sbjct: 1957 RSRSRTPPVTRR-RSRSRTSPITRRRSRSRTSPVTRRR 1993
Score = 62.8 bits (151), Expect = 1e-09
Identities = 61/159 (38%), Positives = 77/159 (48%), Gaps = 23/159 (14%)
Query: 681 PPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSG-PSRS 739
PPS + S P +P + G + + +K R+ R ++K +S PSR
Sbjct: 422 PPSPQPTKVSRHASSSPESPKPAPAPGSHRE-ISSSPTSKNRSHGRAKRDKSHSHTPSRR 480
Query: 740 RSRSKS-----RGRSSSR-------SNSRS-----SKSSGSYSRSRSRSCSRSYSRSRSR 782
RS+S RGRS SR S SRS S+S+ + RSRS R SRS R
Sbjct: 481 MGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQ-RRGRSRSPQR 539
Query: 783 ---SRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSP 818
SRSR+ R RSRS R RS S SP R RSRSR+P
Sbjct: 540 PGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTP 578
Score = 62.8 bits (151), Expect = 1e-09
Identities = 56/146 (38%), Positives = 72/146 (49%), Gaps = 33/146 (22%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKS---RGRSSSR----------SNSRSSKSSGSY 764
R++ R R+G+ R+ P R RSRS+S RGRS SR S+ R +KS S
Sbjct: 680 RSRSRTPARRGRS-RSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQ 738
Query: 765 SRSRSRSC------------SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRR 812
RSRS S SRS S RS+++SR RS S S + KS +P RR R
Sbjct: 739 RRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSR 798
Query: 813 SRSRSP-----TPPSSAGLGSNSAPP 833
S S P TPP + S+S+PP
Sbjct: 799 SGSSQPKAKSRTPPRRS--RSSSSPP 822
Score = 62.4 bits (150), Expect = 2e-09
Identities = 51/137 (37%), Positives = 68/137 (49%), Gaps = 20/137 (14%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYS 777
R++ R+ R S +R RSRS++ + RS SR+S + SRSR+ R S
Sbjct: 1971 RSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRS 2030
Query: 778 RSRS----RSRSRSRSS-----RSRSRSQSRSRSKSY----SPGRRRRS-------RSRS 817
RSR+ R RSRSRS RSRSR+ +R K P RRRS RSRS
Sbjct: 2031 RSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSRS 2090
Query: 818 PTPPSSAGLGSNSAPPI 834
TPP++ + PP+
Sbjct: 2091 ATPPATRNHSGSRTPPV 2107
Score = 58.9 bits (141), Expect = 2e-08
Identities = 61/174 (35%), Positives = 81/174 (46%), Gaps = 31/174 (17%)
Query: 695 SPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRS- 753
SP +H R R+ + + RR + + SRSR+ SR RS SR+
Sbjct: 1869 SPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTP 1928
Query: 754 --NSRSSKSSGSYSRSRSRSCSRSYSRSRSRSR--------SRSRSS-----RSRSRS-- 796
R S+S +R RSRS + +R RSRSR SRSR+S RSRSR+
Sbjct: 1929 PVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSP 1988
Query: 797 --QSRSRSKSYSPGRRRRSRSR----------SPTPPSSAGLGSNSAPPIPDSR 838
+ RSRS++ SP RRRSRSR S TPP+ + P +P R
Sbjct: 1989 VTRRRSRSRT-SPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKR 2041
Score = 55.8 bits (133), Expect = 2e-07
Identities = 49/135 (36%), Positives = 65/135 (48%), Gaps = 23/135 (17%)
Query: 718 RAKMRARRRKGQEKRNSGPSR---SRSRSKSRGRSSSRS-------NSRSSKSSGSYSRS 767
R++ R R+ R+ P+R SRSR+ RGRS SRS +SR+ + G S
Sbjct: 668 RSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSS 727
Query: 768 RSRSCSRSYSRSRSRSRS-----RSRSSRSRSRSQSRSRSKSYSPGRRRRS--------R 814
R S+ RSRS S +SR S RSRS S RSK+ S RRS +
Sbjct: 728 SERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPK 787
Query: 815 SRSPTPPSSAGLGSN 829
+S TPP + GS+
Sbjct: 788 QKSQTPPRRSRSGSS 802
Score = 52.0 bits (123), Expect = 3e-06
Identities = 42/106 (39%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 724 RRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRS 783
R+R+ +S S S S S S SSS S+S SS SS S S S S S ++ ++ +
Sbjct: 2603 RKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKP 2662
Query: 784 RS---------RSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTP 820
S RSRS R S SRS SYSP RRR S P+P
Sbjct: 2663 ASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRP-SPQPSP 2707
Score = 50.4 bits (119), Expect = 7e-06
Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 736 PSRSRSRSKSRGRSSSRSNSRSSKSSGSYS-RSRS-RSCSRSYSRSRSRSRS--RSRSSR 791
P RSRS S S+GR S S S++SS + +SR+ R SRS +++SR+ R RSSR
Sbjct: 1633 PRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSR 1692
Query: 792 S------RSRSQSRSRSKSYSPGRRRRSRSRSPTPPS 822
S ++R RSRS S SP R R+ R PS
Sbjct: 1693 SSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPS 1729
Score = 49.7 bits (117), Expect = 1e-05
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Query: 725 RRKGQEKRNSGPSRSRSRSKSRGRSSSRS------NSRSSKSSGSYSRSRSRSCSRSYSR 778
+R+ +E + P + S R SSSRS + K G S S S R S
Sbjct: 154 QRRAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSS 213
Query: 779 SRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSA 831
+ + RS S S + + RS + + +R+RSRS +P P S S SA
Sbjct: 214 KKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSA 266
Score = 49.7 bits (117), Expect = 1e-05
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 720 KMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRS 779
K + ++ +G+ +S P R R +S + + S S S+ K +S+ +S +
Sbjct: 189 KKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKS------KD 242
Query: 780 RSRSRSRSRSSRSRSRSQSRSRSK-SYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSR 838
+ R RSRS + +SR RS S S S RSRSRS + + +P R
Sbjct: 243 KKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGR 302
Query: 839 LGE 841
GE
Sbjct: 303 RGE 305
Score = 47.8 bits (112), Expect = 5e-05
Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 720 KMRARRRKGQEKRNSGPSRSR-SRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSR 778
K ++R + S P +R +R R RS+S S S++ + RS S S +
Sbjct: 1679 KTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEK 1738
Query: 779 SRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRS 817
SRS R RS SS + R RS S P +RSRSRS
Sbjct: 1739 SRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRS 1777
Score = 47.0 bits (110), Expect = 8e-05
Identities = 54/174 (31%), Positives = 73/174 (41%), Gaps = 31/174 (17%)
Query: 667 KPLDPKDIRLPPPMPPSERLLAAVEAFYSPPSHDR--PRNSEGWEQNGLYEFFRAKMRAR 724
+PL + P PPSE + P+ DR P++ E Q+ E +
Sbjct: 379 QPLATTPLSQEPVNPPSE----------ASPTRDRSPPKSPEKLPQSSSSESSPPSPQPT 428
Query: 725 R-RKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRS-- 781
+ + P + + R SSS ++ S +S S + SR RSRS
Sbjct: 429 KVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPA 488
Query: 782 ---RSRSRSRS------SRSRSRSQSRSRS-----KSYSPGRRRRSRSRSPTPP 821
R RSRSR+ SRSRS RSRS +S SP +RR RSRSP P
Sbjct: 489 TAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSP--QRRGRSRSPQRP 540
Score = 47.0 bits (110), Expect = 8e-05
Identities = 47/131 (35%), Positives = 67/131 (51%), Gaps = 20/131 (15%)
Query: 720 KMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRS-SKSSGSYSRSRSRS--CSRSY 776
K ++R + + + NS P +SR SR RS S S+ RS +KS S RS S S C +
Sbjct: 731 KNKSRTSQRRSRSNSSPEMKKSRISSR-RSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQK 789
Query: 777 SRS---RSRS-----RSRSRSSRSRSRSQSR--SRSKSYSPGRRRRSRS------RSPTP 820
S++ RSRS +++SR+ RSRS S + KS +P R+ S S +S TP
Sbjct: 790 SQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTP 849
Query: 821 PSSAGLGSNSA 831
P + S A
Sbjct: 850 PRQGSITSPQA 860
Score = 45.8 bits (107), Expect = 2e-04
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 17/123 (13%)
Query: 726 RKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRS 785
R+ + +S +RSR+ + R RS S S+ ++ S S R RS S R+ + SR R RS
Sbjct: 1705 RRSRSASSSPETRSRTPPRHR-RSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSR-RGRS 1762
Query: 786 RSRSSRSRSRSQSRSR--------------SKSYSPGRRRRSRSRS-PTPPSSAGLGSNS 830
S R RS+SRSR S + RR+RSRSRS T G G +S
Sbjct: 1763 PSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHS 1822
Query: 831 APP 833
P
Sbjct: 1823 RSP 1825
Score = 45.4 bits (106), Expect = 2e-04
Identities = 46/149 (30%), Positives = 61/149 (40%), Gaps = 29/149 (19%)
Query: 718 RAKMRARRRKGQE-----KRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSC 772
R +R R R G K P RSRS S + R+ R+ S S ++ +
Sbjct: 1570 RTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAP 1629
Query: 773 SRSYSRSRSRSRS---------------------RSRSSRSRSRSQSRSRSKSYSPGRRR 811
RSRS S S +SR++R SRS ++KS +P RRR
Sbjct: 1630 RALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRR 1689
Query: 812 RSRSRSPTPPSSAGLG--SNSAPPIPDSR 838
SRS SP A L S SA P++R
Sbjct: 1690 SSRS-SPELTRKARLSRRSRSASSSPETR 1717
Score = 45.1 bits (105), Expect = 3e-04
Identities = 54/155 (34%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 677 PPPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGP 736
P P P+ R L S S R + EG K R RR R+S
Sbjct: 1622 PEPKAPAPRALPRRSRSGSS-SKGRGPSPEGSSSTESSPEHPPKSRTARRGS---RSSPE 1677
Query: 737 SRSRSRSKSRGRSSSRSN--------SRSSKSSGSYSRSRSRSCSR---SYSRSRSRSRS 785
+++SR+ R RSS S SR S+S+ S +RSR+ R S S S
Sbjct: 1678 PKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAE 1737
Query: 786 RSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTP 820
+SRSSR R RS S R+K+ S RR RS SP P
Sbjct: 1738 KSRSSRRR-RSASSPRTKTTS----RRGRSPSPKP 1767
Score = 44.3 bits (103), Expect = 5e-04
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 25/175 (14%)
Query: 695 SPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKS---RGRSSS 751
S P +R ++S+ + E + K R+ K + K + R RSRS + + R +
Sbjct: 203 SSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRK-SKDKKRKRSRSTTPAPKSRRAH 261
Query: 752 RSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSR-------SRSQSRSRSKS 804
RS S S SS SRSRSRS + + RS S +S R S + S +
Sbjct: 262 RSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRP 321
Query: 805 YSP--------------GRRRRSRSRSPTPPSSAGLGSNSAPPIPDSRLGEENKG 845
SP + ++ +S + PS + PP P L E + G
Sbjct: 322 SSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGG 376
Score = 42.4 bits (98), Expect = 0.002
Identities = 44/147 (29%), Positives = 51/147 (34%), Gaps = 34/147 (23%)
Query: 723 ARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRS--------------- 767
A + +E+R+S S S S S S SSS S+S S SS S
Sbjct: 2522 AALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPS 2581
Query: 768 -------------------RSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPG 808
R S S S S S S S SS S S S S S S S S
Sbjct: 2582 PTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2641
Query: 809 RRRRSRSRSPTPPSSAGLGSNSAPPIP 835
S S SP P L ++P P
Sbjct: 2642 SSSSSSSPSPAKPGPQALPKPASPKKP 2668
Score = 42.0 bits (97), Expect = 0.003
Identities = 43/129 (33%), Positives = 50/129 (38%), Gaps = 25/129 (19%)
Query: 729 QEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSR-------- 780
+ KR S S S S S S SSS S+S SS SS S S S S S S S S ++
Sbjct: 2602 KRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPK 2661
Query: 781 ---------SRSRSRS--------RSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSS 823
RSRS R SRS S S R S P R + S S
Sbjct: 2662 PASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRR 2721
Query: 824 AGLGSNSAP 832
G + +P
Sbjct: 2722 GQRGDSRSP 2730
Score = 40.8 bits (94), Expect = 0.006
Identities = 38/116 (32%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Query: 709 EQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSR 768
E++G K AR GQ R SG S+ K RS S SS S + +R+
Sbjct: 1515 ERSGSESSVDQKTVARTPLGQRSR-SGSSQELD-VKPSASPQERSESDSSPDSKAKTRTP 1572
Query: 769 SRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSA 824
R SRS S S+SR RSRS S + K + R + SP P + A
Sbjct: 1573 LRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPA 1628
Score = 40.8 bits (94), Expect = 0.006
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 739 SRSRSKSRGRSSSRSNSRSSKSSGSYSRS-----RSRSCSRSYSRSRSRSRSRSRSSRSR 793
SRS + + +S + RSS+SS +R RSRS S S +RSR+ R R S S
Sbjct: 1672 SRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSS-PETRSRTPPRHRRSPSV 1730
Query: 794 SRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAP 832
S + +S+S RRRRS S SP +++ G + +P
Sbjct: 1731 SSPEPAEKSRS---SRRRRSAS-SPRTKTTSRRGRSPSP 1765
Score = 40.0 bits (92), Expect = 0.010
Identities = 46/175 (26%), Positives = 68/175 (38%), Gaps = 17/175 (9%)
Query: 679 PMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRR---KGQEKRNSG 735
P PS R + S R+S G+ + R R R + K
Sbjct: 1432 PRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQ 1491
Query: 736 PSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRS---------RSR 786
R RSRS S +++ + + SGS S ++ +R+ RSRS S
Sbjct: 1492 TPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSA 1551
Query: 787 SRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLG-----SNSAPPIPD 836
S RS S S S++K+ +P R+R SP S + L S S+P + D
Sbjct: 1552 SPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKD 1606
Score = 39.3 bits (90), Expect = 0.017
Identities = 46/129 (35%), Positives = 55/129 (42%), Gaps = 19/129 (14%)
Query: 725 RRKGQEKRNSGPSRSRS-RSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRS-- 781
R K PSRS S + K + S R S S SS S SR SR+ R RSRS
Sbjct: 898 RVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPR---RSRSVS 954
Query: 782 -----RSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSP-------TPPSSAGLGSN 829
SR R S S S S ++ K +P R+ S S SP TPP + GS
Sbjct: 955 PCSNVESRLLPRYSHSGSSSPD-TKVKPETPPRQSHSGSISPYPKVKAQTPPGPSLSGSK 1013
Query: 830 SAPPIPDSR 838
S P S+
Sbjct: 1014 SPCPQEKSK 1022
Score = 38.1 bits (87), Expect = 0.038
Identities = 56/195 (28%), Positives = 75/195 (38%), Gaps = 40/195 (20%)
Query: 678 PPMPPSERLLAAVEAFYSPPSHDRPRNSEGWEQNGLYEFFRAKMRA---RRRKG----QE 730
P M S + SP S + R S +G + K + R R G +
Sbjct: 747 PEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKA 806
Query: 731 KRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGS-YSRSRS-------------------- 769
K + P RSRS S + S++ SR S SS S + + +S
Sbjct: 807 KSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVT 866
Query: 770 ---RSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGL 826
RSC S +SR+ SR S S S S R KS +P R+ SRS SP P A +
Sbjct: 867 PQRRSCFESSPDPELKSRTPSRHSCSGS---SPPRVKSSTPPRQSPSRSSSPQPKVKAII 923
Query: 827 G------SNSAPPIP 835
S S+ P P
Sbjct: 924 SPRQRSHSGSSSPSP 938
Score = 34.3 bits (77), Expect = 0.55
Identities = 46/150 (30%), Positives = 52/150 (34%), Gaps = 53/150 (35%)
Query: 722 RARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRS-------------- 767
R RR +S S S S S S SSS S+S SS SS S S S
Sbjct: 2603 RKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKP 2662
Query: 768 -----------RSRSC-----------SRSYS----------------RSRSRSRSRSRS 789
RSRS S SYS +S S R R
Sbjct: 2663 ASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRG 2722
Query: 790 SRSRSRSQS-RSRSKSYSPGRRRRSRSRSP 818
R SRS S + R ++ SP R SRSP
Sbjct: 2723 QRGDSRSPSHKRRRETPSPRPMRHRSSRSP 2752
Score = 33.9 bits (76), Expect = 0.71
Identities = 53/186 (28%), Positives = 70/186 (37%), Gaps = 47/186 (25%)
Query: 722 RARRRKGQEKRNSG--PSRSRSRSKSRGRSSSRSNSRSSKSSGS-YSRSRS--------- 769
R+R Q K S P RSRS S + S++ SR S SS S + + +S
Sbjct: 796 RSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSI 855
Query: 770 --------------RSCSRSYSRSRSRSRSRSRSSRSRSRS----------QSRSRSKS- 804
RSC S +SR+ SR S S S QS SRS S
Sbjct: 856 TSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSP 915
Query: 805 -------YSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSRLGEENKGHQMLVKMGWSGS 857
SP +R S S SP+P + + S + P S N ++L + SGS
Sbjct: 916 QPKVKAIISPRQRSHSGSSSPSP---SRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGS 972
Query: 858 GGLGAK 863
K
Sbjct: 973 SSPDTK 978
Score = 31.6 bits (70), Expect = 3.5
Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 737 SRSRSRSKSRG-RSSSRSNSRSSKSSGSYSRS-RSRSCSRSYSRSRSRSRSRSRSSRSRS 794
SRSR+ +RG RS +RS + S S S S RSRS + +R+ S SR+ + S S
Sbjct: 2054 SRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNS-S 2112
Query: 795 RSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAP 832
R SR S SP R RS P LGS+ P
Sbjct: 2113 RMSCFSR-PSMSPTPLDRCRSPGMLEP----LGSSRTP 2145
Score = 31.2 bits (69), Expect = 4.6
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 743 SKSRGRSSSRSNSRSSKSSG-SYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRS----RSQ 797
++S G SSS + + + +G S ++S S + R+ SR RS S SS R+
Sbjct: 1376 TRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPEMKDGLPRTP 1435
Query: 798 SRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIP 835
SR SPG R S + S S + G P P
Sbjct: 1436 SRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTP 1473
Score = 31.2 bits (69), Expect = 4.6
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Query: 736 PSRSRSRSKSRGRSSS---RSNSRSSKSSGSYS-RSRSRSCSRSYSRSRSRSRSRSRSSR 791
PSR RS S S R+ SR S+S S R S + SR S +
Sbjct: 1414 PSRERSSSASSPEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTP 1473
Query: 792 SRSRSQSRSRSKSYSPGRRRRSRSRSPTPP 821
SR RS+ S + + + R RSRSP+ P
Sbjct: 1474 SRGRSECDSSPEPKALPQTPRPRSRSPSSP 1503
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 75.9 bits (185), Expect = 2e-13
Identities = 90/309 (29%), Positives = 105/309 (33%), Gaps = 63/309 (20%)
Query: 513 PFRMQRPPHFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYPHRFD 572
PF PP +GP PP P F H F PP F PP P P
Sbjct: 80 PFPPPMPPSAQGPLPPCPIRPPFPNHQMRHPFP-VPPCF--PPMPPPMPCPNNPPVPGAP 136
Query: 573 YPQGDFPAEMGPPHHHPGHRMPHPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPP 632
QG FP M PP MPHP PP PQ ++ PP G
Sbjct: 137 PGQGTFPFMMPPPS------MPHPP----PPPVMPQQVNYQYPP-------------GYS 173
Query: 633 HINHDDPSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPPSERLLAAVEA 692
H N PS + + P+ + ++ L P P P PSER + E
Sbjct: 174 HHNFPPPSFNS---FQNNPSSFLPSANNSSSPHFRHLPP----YPLPKAPSER--RSPER 224
Query: 693 FYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSR 752
H +S G R R + ++R G S R R SR RS
Sbjct: 225 LKHYDDHRHRDHSHG--------------RGERHRSLDRRERGRSPDRRRQDSRYRSD-- 268
Query: 753 SNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSR-SSRSRSRSQSRSRSKSYSPGRRR 811
Y R R+ S RSY RSR R R R R RS S RS K Y R
Sbjct: 269 -----------YDRGRTPSRHRSYERSRERERERHRHRDNRRSPSLERSYKKEYKRSGRS 317
Query: 812 RSRSRSPTP 820
S P P
Sbjct: 318 YGLSVVPEP 326
Score = 44.3 bits (103), Expect = 5e-04
Identities = 71/292 (24%), Positives = 91/292 (31%), Gaps = 63/292 (21%)
Query: 357 PPAPPPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPHDQIPP 416
P PP P P+T +S P +P ++ P+A GP P P PP
Sbjct: 44 PQQPPVQYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIR--PP 101
Query: 417 NKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGP-PHCPPWNNSHEGMWGEQRGDPGWNGQ 475
P PV P PP PP P P P PP GQ
Sbjct: 102 FPNHQMRHPFPVPPC---FPPMPPPMPCPNNPPVPGAPP-------------------GQ 139
Query: 476 RDAPWNNQPDAAWNSQFEGPWNSQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQF 535
P F P S PP PP P +PP H F
Sbjct: 140 GTFP------------FMMPPPSMPHPPP-------PPV---MPQQVNYQYPPGYSHHNF 177
Query: 536 NQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQGDFPAEMGPPH---HHPGHR 592
PP ++F P F+ P + P + H YP P+E P H+ HR
Sbjct: 178 -PPPSFNSFQNNPSSFL----PSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHR 232
Query: 593 MPHPGINEHPPWAGPQHPDFGPPPHGFNGQPPHMRRQGPPHINHDDPSLVPN 644
+H G +H G+ P RRQ + + D P+
Sbjct: 233 H-----RDHSHGRGERHRSL---DRRERGRSPDRRRQDSRYRSDYDRGRTPS 276
Score = 42.0 bits (97), Expect = 0.003
Identities = 36/111 (32%), Positives = 41/111 (36%), Gaps = 12/111 (10%)
Query: 356 PPPAPPPAPAPAPAIP-----PTTQPDD--SKPPIQMPGSSEYEAPGGVQDPAAAGPRGP 408
PPP PP A P P P P Q PP P P P A +G
Sbjct: 82 PPPMPPSAQGPLPPCPIRPPFPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVPGAPPGQGT 141
Query: 409 GPHDQIPPNKPPWFDQPHPVAPWGQQQPPEQPP-YPHHQGGPPHCPPWNNS 458
P PP+ P P PV P QQ + PP Y HH PP + N+
Sbjct: 142 FPFMMPPPSMP--HPPPPPVMP--QQVNYQYPPGYSHHNFPPPSFNSFQNN 188
Score = 34.7 bits (78), Expect = 0.42
Identities = 28/98 (28%), Positives = 32/98 (32%), Gaps = 9/98 (9%)
Query: 355 PP--PPAPPPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAG---PRGPG 409
PP PP PPP P P P P P MP S P P P G
Sbjct: 114 PPCFPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYS 173
Query: 410 PHDQIPPNKPPWFDQPHPVAPWGQQQPPEQ----PPYP 443
H+ PP+ + + P P PPYP
Sbjct: 174 HHNFPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYP 211
>gi|72534660 splicing factor, arginine/serine-rich 7 [Homo sapiens]
Length = 238
Score = 75.5 bits (184), Expect = 2e-13
Identities = 56/111 (50%), Positives = 66/111 (59%), Gaps = 8/111 (7%)
Query: 731 KRNSGPSRSRSRSKSRGRSSSRSNSRS-SKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRS 789
+R SRSRS S+SRGR SRS SRS + S S S RSRS S SRS S RSRS S
Sbjct: 124 RRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRRSRSGS 183
Query: 790 SRS----RSRSQSRSRSKSYSPGRRRRSRSRSPTPP---SSAGLGSNSAPP 833
+ +S S+SRSRS+S S R RS+SRSP+P S +G SA P
Sbjct: 184 IKGSRYFQSPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSGSPRRSASP 234
Score = 65.9 bits (159), Expect = 2e-10
Identities = 58/138 (42%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 679 PMPPSERLLAAVEA---FYSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRR-KGQEKRNS 734
P P++R E Y + R R S ++ R R+R R +G+ R++
Sbjct: 99 PFDPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSA 158
Query: 735 GPSRSRSRSKSRGRSSSRSNSRSSKSSGS-YSRSRSRSCSRSYSRSRSR-SRSRSRS-SR 791
P RSRS S R RS+S SRS GS Y +S SRS SRS S SR R SRS+SRS S
Sbjct: 159 SPRRSRSISLRRSRSASLRRSRSGSIKGSRYFQSPSRSRSRSRSISRPRSSRSKSRSPSP 218
Query: 792 SRSRSQSRSRSKSYSPGR 809
RSRS S S +S SP R
Sbjct: 219 KRSRSPSGSPRRSASPER 236
Score = 50.4 bits (119), Expect = 7e-06
Identities = 46/106 (43%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 736 PSRSR-SRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSR-SR 793
P RSR R +R G Y+ R R SRSRSRS SRSR R SR
Sbjct: 86 PRRSRFDRPPARRPFDPNDRCYECGEKGHYAYDCHRYSRRRRSRSRSRSHSRSRGRRYSR 145
Query: 794 SRSQSRS-RSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAPPIPDSR 838
SRS+SR RS+S SP RRSRS S SA L + + I SR
Sbjct: 146 SRSRSRGRRSRSASP---RRSRSISLRRSRSASLRRSRSGSIKGSR 188
Score = 48.9 bits (115), Expect = 2e-05
Identities = 35/69 (50%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 772 CSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSA 831
C R R RSRSRSRS S RSR R SRSRS+S R RRSRS SP S L + +
Sbjct: 119 CHRYSRRRRSRSRSRSHS-RSRGRRYSRSRSRS----RGRRSRSASPRRSRSISLRRSRS 173
Query: 832 PPIPDSRLG 840
+ SR G
Sbjct: 174 ASLRRSRSG 182
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 75.1 bits (183), Expect = 3e-13
Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 2/146 (1%)
Query: 701 RPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKS 760
R S W +N E + R+ ++ + +S P + RS+S + R +SRS
Sbjct: 348 RRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSP 407
Query: 761 SGSYSRSRSRSCSRSYSRSRSRSRSRSRS-SRSRSRSQSRSRSKSYSPGRRR-RSRSRSP 818
+ + RSRSRS ++ RSRSRS +++R SRSRS ++R RS+S SP + R SRSRSP
Sbjct: 408 NKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSP 467
Query: 819 TPPSSAGLGSNSAPPIPDSRLGEENK 844
+ + S+LG +K
Sbjct: 468 NKARDRSRSRSPSKERDHSQLGSPSK 493
Score = 65.5 bits (158), Expect = 2e-10
Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 27/141 (19%)
Query: 698 SHDRPRNSEGWEQNGLYEFFRAKMRARRRKG----------QEKRNSGPSRSRSRSKSRG 747
+H R R S W++N ++ R+R RKG + G S+++SR+ RG
Sbjct: 298 THSRVR-SHSWKRN------HSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRG 350
Query: 748 RSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRS---------SRSRSRSQS 798
RS + S + S + S S+SRS S+ S S + RS+S SRSRS +++
Sbjct: 351 RSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKA 410
Query: 799 RSRSKSYSPGRRR-RSRSRSP 818
R RS+S SP + R RSRSRSP
Sbjct: 411 RDRSRSRSPYKARDRSRSRSP 431
Score = 64.7 bits (156), Expect = 4e-10
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYS 777
R++ R+ + R+ P+++R RS+SR S R +S+ S RSRS S+
Sbjct: 449 RSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQ 508
Query: 778 RSRSRSRSRSRS-SRSRSRSQSRSRSKSYSPGRRR-RSRSRSPT 819
+SRS S+ R RSRS S+ R R +S SP + R RS+SRSP+
Sbjct: 509 CRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPS 552
Score = 60.1 bits (144), Expect = 9e-09
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 20/122 (16%)
Query: 717 FRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSR---------- 766
++A+ R+R R + R+ SRS ++++ R RS S S R GS S+
Sbjct: 444 YKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSP 503
Query: 767 --------SRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSR-SRS 817
SRS S R + RSRS S+ R R +SRS ++ R RS+S SP R R SRS
Sbjct: 504 SKERQCRQSRSSSKERDHRRSRSPSKERQR-RQSRSPNKERDRSQSRSPSEEREHRQSRS 562
Query: 818 PT 819
P+
Sbjct: 563 PS 564
Score = 60.1 bits (144), Expect = 9e-09
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 8/134 (5%)
Query: 718 RAKMRARRRKGQEKRN----SGPSRSRSRSKSRGRSSSRS--NSRSSKSSGSYSRSRSRS 771
+A+ R+R R ++R+ PS+ R +SR S R SRSS + RSRS S
Sbjct: 469 KARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPS 528
Query: 772 CSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRR-RSRSRSPTPPSSAGLGSNS 830
R +SRS ++ R R S+SRS S+ R +S SP + R R R RSP+ +S
Sbjct: 529 KERQRRQSRSPNKERDR-SQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSS 587
Query: 831 APPIPDSRLGEENK 844
+ SR NK
Sbjct: 588 SEERDHSRSRSPNK 601
Score = 59.7 bits (143), Expect = 1e-08
Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 25/139 (17%)
Query: 696 PPSHDR---PRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSR---------- 742
P SH + PR S Q + +R R KRN +RSR+R
Sbjct: 278 PQSHSQSRSPRRSRSGSQK--------RTHSRVRSHSWKRNHSRARSRTRKGILSQMGRH 329
Query: 743 --SKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRS 800
S+S + S++ SR+ + S++ SR+ S RS+S SRS S+ R S R +S
Sbjct: 330 SQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKES-G 388
Query: 801 RSKSYSPGRRR-RSRSRSP 818
RS+S SP ++R SRSRSP
Sbjct: 389 RSQSGSPNKQRDHSRSRSP 407
Score = 59.7 bits (143), Expect = 1e-08
Identities = 40/106 (37%), Positives = 56/106 (52%), Gaps = 2/106 (1%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYS 777
R++ ++ R+ ++ R+S R RS+S + R SRS S+SRS S R +
Sbjct: 499 RSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHR 558
Query: 778 RSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRR-RSRSRSPTPPS 822
+SRS S+ R R R RS S+ R R +S S R SRSRSP S
Sbjct: 559 QSRSPSKERDRR-RWRSPSKERERRQSRSSSEERDHSRSRSPNKQS 603
Score = 59.7 bits (143), Expect = 1e-08
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Query: 697 PSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSR 756
PS +R R + N + +++ + R+ ++ R+ R R R +S + R SR
Sbjct: 527 PSKERQRR-QSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSR 585
Query: 757 SSKSSGSYSRSRSRSCSRSYSRSRSRSR----SRSRS-SRSRSRSQSRSRSKSYSPGRRR 811
SS +SRSRS + YSR R+ S+ SRSR+ S+ + SQSR+ SK P +
Sbjct: 586 SSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQST 645
Query: 812 RSRS----RSPTPPSSAGLGSNSAP 832
RS RSPT SS L N P
Sbjct: 646 VPRSPDWKRSPTRTSS--LSQNRTP 668
Score = 57.4 bits (137), Expect = 6e-08
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 14/116 (12%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSR--SRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRS 775
R++ R+ + R+ P+++R SRS+S ++ RS SRS + +SRSRS + +R
Sbjct: 413 RSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARD 472
Query: 776 YSRSRSRSRSRSRS---SRSRSRSQSRSRSKS---------YSPGRRRRSRSRSPT 819
SRSRS S+ R S S S+ R RSRS S S R RSRSP+
Sbjct: 473 RSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPS 528
Score = 56.6 bits (135), Expect = 1e-07
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 724 RRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRS 783
R R G +KR RS S ++ R+ SR+ G +S+SRS S +S ++SR+
Sbjct: 289 RSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPR 348
Query: 784 RSRSRS-SRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGLGSNSAP 832
R RS + SR+ S+ +S S S+S S R R S +P +G + +P
Sbjct: 349 RGRSHNWSRNPSKERSHSHSRSSSKERDHRG---SSSPRKESGRSQSGSP 395
Score = 56.6 bits (135), Expect = 1e-07
Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 719 AKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNS--RSSKSSGSYSRSRSRSCSRSY 776
+K R RR + +SRS +K R RS SRS S R + S S S+ R R RS
Sbjct: 516 SKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSP 575
Query: 777 SRSRSRSRSRSRSS-RSRSRSQSRSRSKSYSPGR-----RRRSRSRSPT 819
S+ R R +SRS S R SRS+S ++ YS R + SRSR+P+
Sbjct: 576 SKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPS 624
Score = 55.5 bits (132), Expect = 2e-07
Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 10/151 (6%)
Query: 695 SPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGR----SS 750
SP + R S + + R+ + R+R+ N RS+SRS S R S
Sbjct: 502 SPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSR 561
Query: 751 SRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRS-----SRSRSRSQSRSRSKSY 805
S S R + S S+ R R SRS S R SRSRS + SR R+ S+ ++ S+S
Sbjct: 562 SPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSR 621
Query: 806 SPGRRRRSRSRSPTPPSSAGLGSNSAPPIPD 836
+P + + S+S T + ++ P PD
Sbjct: 622 TPS-KEGNHSQSRTSSKESDPSQSTVPRSPD 651
Score = 55.1 bits (131), Expect = 3e-07
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 697 PSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSR 756
PS ++ N + + + + +R + S +S +++ +R R S S SR
Sbjct: 226 PSKEKSDNPSPSSSRKVKSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRSRPQSHSQSR 285
Query: 757 SSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRS-----------SRSRSRSQSRSRSKSY 805
S + S S S+ R+ S RS+S R+ SR+RSR+ S+SRS S+ +S+++S
Sbjct: 286 SPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSR 345
Query: 806 SPGRRRRSRSRSPTP 820
+P RR RS + S P
Sbjct: 346 TP-RRGRSHNWSRNP 359
Score = 55.1 bits (131), Expect = 3e-07
Identities = 44/126 (34%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Query: 726 RKGQEKRNSGPSRSR----SRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRS 781
++ +R+ PS+ R SRS S+ R RS S S + SRS ++ RS SRS S
Sbjct: 493 KERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPS 552
Query: 782 RSRSRSRSSRSRSRSQSRSRSKSYSPGR-RRRSRSRSPTPPSSAGLGSNSAPPIPDSRLG 840
R R SRS S+ + R R +S S R RR+SRS S S N R
Sbjct: 553 EEREH-RQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRAS 611
Query: 841 EENKGH 846
+ K H
Sbjct: 612 SKEKAH 617
Score = 51.6 bits (122), Expect = 3e-06
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYS 777
R + ++ R+ ++ R+S R SRS+S + S S R+S ++SRSR+ S ++S
Sbjct: 571 RWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHS 630
Query: 778 RSRSRSR----SRSRSSRSRSRSQSRSRSKSYSPGRR-RRSRSRSPTPPSSAG 825
+SR+ S+ S+S RS +S +R+ S S R ++ S SP+ S G
Sbjct: 631 QSRTSSKESDPSQSTVPRSPDWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSGG 683
Score = 46.2 bits (108), Expect = 1e-04
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 718 RAKMRARRRKGQEKRNSGPSRS-----------RSRSKSRGRSSSRSNSRSSKSSGSYSR 766
R+K R R + R S S++ SR ++ GR SRS+ RS + + R
Sbjct: 85 RSKARTPSRVSTDTRTSKASKASDVRCHQRRGTHSRGRTPGRRGSRSSKRSPSRASTPGR 144
Query: 767 SRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSAGL 826
R+ + S+ + SR +S + R+ ++ S + R +S PP +G+
Sbjct: 145 IRTHGARPGMASRVRTPTSQQKGSRGKSYGRPRTSNRERSDSQPRNLSKKSYRPPGGSGI 204
Query: 827 GSNS 830
G +S
Sbjct: 205 GRSS 208
Score = 43.9 bits (102), Expect = 7e-04
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 741 SRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSR- 799
SR+ SSS+S +S +R SRS RS +R+ SR + +R+S++ S R
Sbjct: 52 SRNSVMSPSSSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDTRTSKASKASDVRC 111
Query: 800 -----SRSKSYSPGRR-RRSRSRSPTPPSSAG-LGSNSAPPIPDSRL 839
+ S+ +PGRR RS RSP+ S+ G + ++ A P SR+
Sbjct: 112 HQRRGTHSRGRTPGRRGSRSSKRSPSRASTPGRIRTHGARPGMASRV 158
Score = 30.4 bits (67), Expect = 7.9
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 30/132 (22%)
Query: 731 KRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYS-----------RSRSRSCSRSYSRS 779
KR+S PS S + S S ++ S KS+ S + SR+ S S S+S
Sbjct: 5 KRSSKPSMSLAPSGSSMPTADPKPPASLKSTKSATPNRSLVPTKPATSRNSVMSPSSSKS 64
Query: 780 -RSRSRSRSRSSRSRSRSQSRSRSKSYSP------------------GRRRRSRSRSPTP 820
+S S R+ S+R SRS+ RS++++ S +RR + SR TP
Sbjct: 65 TKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDTRTSKASKASDVRCHQRRGTHSRGRTP 124
Query: 821 PSSAGLGSNSAP 832
S +P
Sbjct: 125 GRRGSRSSKRSP 136
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 74.7 bits (182), Expect = 4e-13
Identities = 54/124 (43%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 724 RRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRS 783
R + KR++ RS SRS+SR S RS + S S R R R SRS + RSRS
Sbjct: 3 RESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRS 62
Query: 784 RSRSRSSRSRSRSQSRSRSKSYSPGR-RRRSRSRSPTPPS-SAGLGSNSAPPIPDSRLGE 841
R R R RSRSR + RSR + S R RRRSRSRS S S+ G+ S SR E
Sbjct: 63 RDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKE 122
Query: 842 ENKG 845
+ G
Sbjct: 123 KTDG 126
Score = 71.2 bits (173), Expect = 4e-12
Identities = 47/102 (46%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 717 FRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSY 776
+R + +R R G R+ PS RS+ RS SR R + S S + RSRS R
Sbjct: 8 YRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKR 67
Query: 777 SRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSP 818
R RSRSR R RS R R RS+SR R +S S R RRSRS SP
Sbjct: 68 LR-RSRSRERDRS-RERRRSRSRDRRRSRSRSRGRRSRSSSP 107
Score = 70.9 bits (172), Expect = 5e-12
Identities = 56/134 (41%), Positives = 68/134 (50%), Gaps = 11/134 (8%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSR-SRSCSRSY 776
R+ R+R R +KR+ RSRS+ R R RS SR + S S R R RS SR
Sbjct: 17 RSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRER 76
Query: 777 SRSRSRSRSRSRS-SRSRSRSQSRSRSKSYSPGRR-----RRSRSRSPTPPSSAGLGSNS 830
RSR R RSRSR RSRSRS+ R RS+S SPG + RSRS+ T G S
Sbjct: 77 DRSRERRRSRSRDRRRSRSRSRGR-RSRSSSPGNKSKKTENRSRSKEKT---DGGESSKE 132
Query: 831 APPIPDSRLGEENK 844
D + E+ K
Sbjct: 133 KKKDKDDKEDEKEK 146
Score = 55.1 bits (131), Expect = 3e-07
Identities = 66/188 (35%), Positives = 81/188 (43%), Gaps = 41/188 (21%)
Query: 747 GRSSSRSNSRSSKSSGSYSRSRSRSCS----------RSYSRSRSRSRSRSRS-----SR 791
GR S RS+ S SRSRSRS S RS SR R R R RSRS SR
Sbjct: 2 GRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSR 61
Query: 792 SRSRS---QSRSRSKSYSPGRRR-RSRSRSPTPPSSAGLGSNSAPPIPDSRLGEENKGHQ 847
SR R +SRSR + S RRR RSR R + S G S S+ P G ++K +
Sbjct: 62 SRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSP------GNKSKKTE 115
Query: 848 MLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKWDQ-YKGVGVALDDPYENYRRNKSYSFI 906
+ GG +KE K D DK D+ K G N+ +NK +
Sbjct: 116 NRSRSKEKTDGGESSKE-------KKKDKDDKEDEKEKDAG--------NFDQNKLEEEM 160
Query: 907 ARMKARDE 914
+ K R E
Sbjct: 161 RKRKERVE 168
Score = 46.2 bits (108), Expect = 1e-04
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 718 RAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYS 777
R++ R R R + +R+ R RSRS+SRGR S RS+S +KS + +RSRS+ +
Sbjct: 70 RSRSRERDRSRERRRSRSRDRRRSRSRSRGRRS-RSSSPGNKSKKTENRSRSKEKTDGGE 128
Query: 778 RSRSRSRSRSRSSRSRSRSQSR-SRSKSYSPGRRRRSR 814
S+ + + + + + ++K R+R+ R
Sbjct: 129 SSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKER 166
>gi|4827046 U2 small nuclear RNA auxiliary factor 1-like 2 [Homo
sapiens]
Length = 482
Score = 74.3 bits (181), Expect = 5e-13
Identities = 54/127 (42%), Positives = 68/127 (53%), Gaps = 14/127 (11%)
Query: 703 RNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSG 762
+NSE E+ G ++ + +++R RR N P S R+ R SSR + S
Sbjct: 359 KNSERRERMGHHDDYYSRLRGRR-------NPSPDHSYKRNGESERKSSRHRGKKSHKRT 411
Query: 763 SYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQS----RSRSKSYSPGR---RRRSRS 815
S SR R S SR +R RSR RSR R SRSRSRS+S RSRS+S S R RRRS +
Sbjct: 412 SKSRERHNSRSRGRNRDRSRDRSRGRGSRSRSRSRSRRSRRSRSQSSSRSRSRGRRRSGN 471
Query: 816 RSPTPPS 822
R T S
Sbjct: 472 RDRTVQS 478
Score = 59.3 bits (142), Expect = 2e-08
Identities = 45/106 (42%), Positives = 55/106 (51%), Gaps = 15/106 (14%)
Query: 697 PSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSR 756
P H RN E ++ + K R K +E+ NS RSR ++R RS RS R
Sbjct: 385 PDHSYKRNGESERKSSRHR--GKKSHKRTSKSRERHNS-----RSRGRNRDRSRDRSRGR 437
Query: 757 SSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRS 802
SRSRSRS SR RSRS+S SRSR SR R RS +R R+
Sbjct: 438 G-------SRSRSRSRSRRSRRSRSQSSSRSR-SRGRRRSGNRDRT 475
Score = 50.4 bits (119), Expect = 7e-06
Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Query: 701 RPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKS 760
R N+E WE N + + K E+R S+ RGR + S S K
Sbjct: 333 RNPNNEFWEANRDIYLSPDRTGSSFGKNSERRERMGHHDDYYSRLRGRRNP-SPDHSYKR 391
Query: 761 SGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRSRSRSPTP 820
+G R SR + + S+SR R S RSR ++R RS+ S GR RSRSRS +
Sbjct: 392 NGESERKSSRHRGKKSHKRTSKSRERHNS---RSRGRNRDRSRDRSRGRGSRSRSRSRSR 448
Query: 821 PSSAGLGSNSA 831
S +S+
Sbjct: 449 RSRRSRSQSSS 459
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 74.3 bits (181), Expect = 5e-13
Identities = 90/309 (29%), Positives = 107/309 (34%), Gaps = 75/309 (24%)
Query: 329 AQQQQQQQQQQQQLQMPQMEAEVK-------------ATPPPPAPPPAPAPAPAIPPTTQ 375
AQQQQ QQ ++ P +VK A PPPP P P +PP
Sbjct: 311 AQQQQPAQQPKKPSPQPSSPRQVKRAVVVSPKEENKAAEPPPPKIPKIETTHPPLPPAHP 370
Query: 376 PDDSKPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPHDQIPPNKPPWFDQPHPVAPWGQQQ 435
P D KPP+ E E PG V P QIPP P P Q
Sbjct: 371 PPDRKPPL-AAALGEAEPPGPVDATDL-------PKVQIPP----------PAHPAPVHQ 412
Query: 436 PPEQPPYPHHQGGPPHCPPWNNSHEGMWGEQRGDPGWNGQRDAPWNNQPDAAWNSQFEGP 495
P PP PH PP PP M G +G+ + + EGP
Sbjct: 413 P---PPLPHR---PPPPPP----SSYMTGMSTTSSYMSGEGYQSLQSM------MKTEGP 456
Query: 496 WNSQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQHPQFNQPPHPHNFNRFPPRFMQDD 555
S PP G PP + PH P PP PP P FPP +
Sbjct: 457 --SYGALPPAYG----PPAHLPYHPHVYPPNPP--------PPPVPPPPASFPPPAIP-- 500
Query: 556 FPPRHPFERPPYPHRFDYPQGDFPAEMGPPHHHPGHRMPHPGINEHPPWAGPQHPDFGPP 615
PP + PP + ++P P + P H P PHP PP G + PP
Sbjct: 501 -PPTPGYPPPPPTYNPNFPPP--PPRLPPTHAVP----PHP-----PPGLGLPPASYPPP 548
Query: 616 PHGFNGQPP 624
GQPP
Sbjct: 549 AVPPGGQPP 557
Score = 63.5 bits (153), Expect = 8e-10
Identities = 86/344 (25%), Positives = 115/344 (33%), Gaps = 63/344 (18%)
Query: 354 TPPPPAPPPAPAPAPAIPPT--TQPDDSKPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPH 411
TP PP+ P P +P +QP S P Q P + + P Q PA P+ P P
Sbjct: 269 TPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQ-PQQKDPQQPAQQQQPAQQ-PKKPSPQ 326
Query: 412 DQIPPNKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWNNSHEGMWGEQRGDPG 471
P+ P + V+P + + E PP P P +H P
Sbjct: 327 ----PSSPRQVKRAVVVSPKEENKAAEPPP--------PKIPKIETTH----------PP 364
Query: 472 WNGQRDAPWNNQPDAAWNSQFEGPWNSQHEQPPWGGGQREPPFRMQRPPHFRGPFPPHQQ 531
P P AA + E P P ++Q PP P P HQ
Sbjct: 365 LPPAHPPPDRKPPLAAALGEAEPPGPVDATDLP----------KVQIPPPAH-PAPVHQP 413
Query: 532 HPQFNQPPHPHNFNRFPPRFMQDDFPPRHPFERPPYPHRFDYPQ-GDFPAEMGPPHHHPG 590
P ++PP P + + ++ + + P G P GPP H P
Sbjct: 414 PPLPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPPAHLPY 473
Query: 591 HR-----------MPHPGINEHPPWAGPQHPDFGPPPHGFNGQ-PPHMRRQGPPHINHDD 638
H +P P + PP P P + PPP +N PP R P H
Sbjct: 474 HPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPPPRLPPTH----- 528
Query: 639 PSLVPNVPYFDLPAGLMAPLVKLEDHEYKPLDPKDIRLPPPMPP 682
VP P P GL P P + PPP+PP
Sbjct: 529 --AVPPHP----PPGLGLPPASYPPPAVPPGGQPPV--PPPIPP 564
Score = 58.5 bits (140), Expect = 3e-08
Identities = 41/109 (37%), Positives = 43/109 (39%), Gaps = 14/109 (12%)
Query: 355 PPPPAPPPAPAPAPAIPPTTQPDDSKPPIQMPGSSEYEAPGGVQDPAAAGPRGPGPHDQI 414
PPP PPPA P PAIPP T PP P + P P A P P P +
Sbjct: 484 PPPVPPPPASFPPPAIPPPTPGYPPPPPTYNP---NFPPPPPRLPPTHAVPPHPPPGLGL 540
Query: 415 PPNKPPWFDQPHPVAPWGQQQPPEQPPYPHHQGGPPHCPPWNNSHEGMW 463
PP P P V P G QPP PP P PP PP W
Sbjct: 541 PPASYP----PPAVPPGG--QPPVPPPIP-----PPGMPPVGGLGRAAW 578
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,484,894
Number of Sequences: 37866
Number of extensions: 3582234
Number of successful extensions: 69566
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 1645
Number of HSP's that attempted gapping in prelim test: 22533
Number of HSP's gapped (non-prelim): 23601
length of query: 916
length of database: 18,247,518
effective HSP length: 111
effective length of query: 805
effective length of database: 14,044,392
effective search space: 11305735560
effective search space used: 11305735560
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.