Guide to the Human Genome
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Name: ETS1 Sequence: fasta or formatted (485aa) NCBI GI: 219689118
Description:

v-ets erythroblastosis virus E26 oncogene homolog 1 isoform 1

Referenced in:

Ets Family
Retroviral Oncogene Homologs

Other entries for this name:
alt prot [225aa] v-ets erythroblastosis virus E26 oncogene homolog 1 isoform 3
alt prot [441aa] v-ets erythroblastosis virus E26 oncogene homolog 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         26           3
 C cysteine            2.5         12           1
 D aspartate           7.6         37           1
 E glutamate           6.6         32           2
 F phenylalanine       4.5         22           1
 G glycine             5.4         26           2
 H histidine           1.9          9           1
 I isoleucine          3.1         15           2
 K lysine              5.8         28           1
 L leucine             8.0         39           2
 M methionine          2.5         12           2
 N asparagine          3.3         16           1
 P proline             7.2         35           2
 Q glutamine           5.2         25           2
 R arginine            4.5         22           2
 S serine              9.3         45           2
 T threonine           4.5         22           1
 V valine              5.4         26           2
 W tryptophan          2.1         10           1
 Y tyrosine            5.4         26           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   v-ets erythroblastosis virus E26 oncogene homolog 1... 
ETS1                  0.844   v-ets erythroblastosis virus E26 oncogene homolog 1 i...
ETS2                  0.422   v-ets erythroblastosis virus E26 oncogene homolog 2 [...
ETS1                  0.395   v-ets erythroblastosis virus E26 oncogene homolog 1...
GABPA                 0.120   GA binding protein transcription factor, alpha subun...
FLI1                  0.114   Friend leukemia virus integration 1 
ERG                   0.108   ets-related isoform 4 
ERG                   0.108   ets-related isoform 2 
ERG                   0.108   ets-related isoform 1 
ERG                   0.108   ets-related isoform 3 
ETV1                  0.107   ets variant gene 1 isoform f 
ETV1                  0.107   ets variant gene 1 isoform e 
ETV1                  0.107   ets variant gene 1 isoform d 
ETV1                  0.107   ets variant gene 1 isoform c 
ETV1                  0.107   ets variant gene 1 isoform c 
ETV1                  0.107   ets variant gene 1 isoform b 
ETV1                  0.107   ets variant gene 1 isoform a 
FEV                   0.107   FEV (ETS oncogene family) 
ETV5                  0.105   ets variant gene 5 (ets-related molecule) 
ETV4                  0.101   ets variant gene 4 (E1A enhancer binding protein, E...
ETV4                  0.101   ets variant gene 4 (E1A enhancer binding protein, E1...
ETV2                  0.096   ets variant gene 2 
ERF                   0.093   Ets2 repressor factor 
LOC390937             0.092   PREDICTED: similar to hCG2040171 
LOC390937             0.092   PREDICTED: similar to hCG2040171 
LOC390937             0.092   PREDICTED: similar to hCG2040171 
ETV3L                 0.086   ets variant 3-like 
ELK1                  0.086   ELK1 protein 
ELK1                  0.086   ELK1 protein 
ETV3                  0.086   ets variant gene 3 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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