Search of human proteins with 239754229

Search of human proteins with 239754229

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754229 PREDICTED: hypothetical protein [Homo sapiens]
         (513 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754229 PREDICTED: hypothetical protein [Homo sapiens]          1021   0.0  
gi|239748761 PREDICTED: hypothetical protein XP_002346789 [Homo ...  1016   0.0  
gi|239742806 PREDICTED: hypothetical protein XP_002342653 [Homo ...  1016   0.0  
gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]            48   2e-05
gi|41281612 zinc finger protein 828 [Homo sapiens]                     46   7e-05
gi|210031154 zinc finger protein 541 [Homo sapiens]                    46   7e-05
gi|33946327 nucleoporin 214kDa [Homo sapiens]                          44   3e-04
gi|28559039 mediator complex subunit 1 [Homo sapiens]                  44   5e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    43   6e-04
gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo ...    41   0.003
gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo ...    41   0.003
gi|239508959 PREDICTED: hypothetical protein [Homo sapiens]            41   0.003
gi|122692281 hypothetical protein LOC645369 [Homo sapiens]             41   0.003
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         40   0.004
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    40   0.007
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap...    40   0.007
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]             39   0.009
gi|153792074 proline rich 12 [Homo sapiens]                            39   0.009
gi|239757559 PREDICTED: hypothetical protein [Homo sapiens]            39   0.011
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap...    39   0.011
gi|89276766 trophinin isoform 5 [Homo sapiens]                         39   0.011
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         39   0.011
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]          39   0.015
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa...    38   0.019
gi|95091988 Rho GTPase activating protein 6 isoform 3 [Homo sapi...    38   0.025
gi|95091875 Rho GTPase activating protein 6 isoform 1 [Homo sapi...    38   0.025
gi|60593036 keratin associated protein 5-3 [Homo sapiens]              38   0.025
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        38   0.025
gi|208022661 hypothetical protein LOC57701 [Homo sapiens]              37   0.033
gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]            37   0.043

>gi|239754229 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 513

 Score = 1021 bits (2640), Expect = 0.0
 Identities = 513/513 (100%), Positives = 513/513 (100%)

Query: 1   MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS 60
           MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS
Sbjct: 1   MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS 60

Query: 61  VSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR 120
           VSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR
Sbjct: 61  VSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR 120

Query: 121 WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS 180
           WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS
Sbjct: 121 WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS 180

Query: 181 APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL 240
           APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL
Sbjct: 181 APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL 240

Query: 241 SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS 300
           SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS
Sbjct: 241 SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS 300

Query: 301 MLANSPLESRFTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL 360
           MLANSPLESRFTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL
Sbjct: 301 MLANSPLESRFTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL 360

Query: 361 VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS 420
           VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS
Sbjct: 361 VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS 420

Query: 421 SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN 480
           SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN
Sbjct: 421 SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN 480

Query: 481 AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA 513
           AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA
Sbjct: 481 AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA 513


>gi|239748761 PREDICTED: hypothetical protein XP_002346789 [Homo
           sapiens]
          Length = 513

 Score = 1016 bits (2626), Expect = 0.0
 Identities = 511/513 (99%), Positives = 511/513 (99%)

Query: 1   MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS 60
           MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS
Sbjct: 1   MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS 60

Query: 61  VSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR 120
           VSSA FSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR
Sbjct: 61  VSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR 120

Query: 121 WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS 180
           WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS
Sbjct: 121 WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS 180

Query: 181 APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL 240
           APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL
Sbjct: 181 APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL 240

Query: 241 SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS 300
           SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS
Sbjct: 241 SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS 300

Query: 301 MLANSPLESRFTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL 360
           MLANSPLESR TPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL
Sbjct: 301 MLANSPLESRSTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL 360

Query: 361 VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS 420
           VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS
Sbjct: 361 VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS 420

Query: 421 SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN 480
           SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN
Sbjct: 421 SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN 480

Query: 481 AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA 513
           AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA
Sbjct: 481 AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA 513


>gi|239742806 PREDICTED: hypothetical protein XP_002342653 [Homo
           sapiens]
          Length = 513

 Score = 1016 bits (2626), Expect = 0.0
 Identities = 511/513 (99%), Positives = 511/513 (99%)

Query: 1   MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS 60
           MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS
Sbjct: 1   MCRVRSCSDQNRLLHTLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPS 60

Query: 61  VSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR 120
           VSSA FSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR
Sbjct: 61  VSSASFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFR 120

Query: 121 WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS 180
           WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS
Sbjct: 121 WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS 180

Query: 181 APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL 240
           APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL
Sbjct: 181 APSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSL 240

Query: 241 SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS 300
           SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS
Sbjct: 241 SREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFS 300

Query: 301 MLANSPLESRFTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL 360
           MLANSPLESR TPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL
Sbjct: 301 MLANSPLESRSTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGL 360

Query: 361 VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS 420
           VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS
Sbjct: 361 VVAAGVAVVAALGTEPPKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGS 420

Query: 421 SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN 480
           SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN
Sbjct: 421 SSVTGGFGKSSGGLGRRPCRGCAGEGRKTDLRGSRGCHLQNLLDVCQLDGRLARDGLDHN 480

Query: 481 AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA 513
           AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA
Sbjct: 481 AAVRLDDEALLEGLQGQVLYAVLGRGENCERTA 513


>gi|169173184 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1230

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 65/235 (27%), Positives = 92/235 (39%), Gaps = 18/235 (7%)

Query: 39  LSSSLFSEDLFSAALSPSEG----PSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGA 94
           + S+ ++    S A +PS+     PS S A  S+ +  A  + S TS   S   SS SGA
Sbjct: 126 IPSAFWASPSASGASTPSDSGWASPSASWASTSSDSGWASPSASWTSPSASCASSSASGA 185

Query: 95  GWGPSSAVLAPSPF--SSLGSWR--PCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAP 150
                S   +PS F  S   SW   P  F W      +       S ++ C   +A  A 
Sbjct: 186 STPSDSGWASPSVFWVSPSTSWASSPSDFGWASTPSDS----GWASSSASCISPSASGAS 241

Query: 151 ASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCT 210
            S     +  S S V+ S SR      SS +  AS   S    +S   W+ P    +  +
Sbjct: 242 TSSDSGWASPSASWVSTSTSRA---STSSDSGWASSSASWDSITSDSGWVCPSASWASSS 298

Query: 211 GEAVSAVACSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGV 265
               SA + S  +SP+  R+S     G +         P D   G +S H  SGV
Sbjct: 299 ASWASAPSDSGSSSPSVSRASTLSVSGWASFSASGASAPSD--SGWTS-HSASGV 350



 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 67/227 (29%), Positives = 88/227 (38%), Gaps = 28/227 (12%)

Query: 24  SALLATLLGESVFGFLSSSLFSEDLFSAALSPS-EGPSVSSAGFSAGASPAPGADSTTSA 82
           SA  A++  +S +   S+S  S    S   SPS  G S+ S   S  ASP+    S  SA
Sbjct: 72  SASWASIPSDSGWASPSASWASTPSDSGWASPSASGASIPSD--SGWASPSVSGASIPSA 129

Query: 83  ----GVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQA 138
                 + G S+ S +GW   SA  A +  SS   W   +  W           P  S A
Sbjct: 130 FWASPSASGASTPSDSGWASPSASWAST--SSDSGWASPSASWTS---------PSASCA 178

Query: 139 SFCSCEAAPPAP---ASPSPSASLKSMSLVAKSRSRLWLLD------ASSSAPSASPVLS 189
           S  +  A+ P+    ASPS      S S  +      W         ASSSA   SP  S
Sbjct: 179 SSSASGASTPSDSGWASPSVFWVSPSTSWASSPSDFGWASTPSDSGWASSSASCISPSAS 238

Query: 190 SVPCSSSGSWLSPRPC-SSRCTGEAVSAVACSTGASPATWRSSVAPS 235
               SS   W SP     S  T  A ++      +S A+W S  + S
Sbjct: 239 GASTSSDSGWASPSASWVSTSTSRASTSSDSGWASSSASWDSITSDS 285



 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 18/198 (9%)

Query: 53  LSPSEGPSVSSAGFSAGASPAPGADSTTSAGV----SGGFSSCSGAGWG-PSSAVLAPSP 107
           +SPS   + S + F   ++P+    +++SA      + G S+ S +GW  PS++ ++ S 
Sbjct: 201 VSPSTSWASSPSDFGWASTPSDSGWASSSASCISPSASGASTSSDSGWASPSASWVSTST 260

Query: 108 F----SSLGSWRPCAFRWRLRVPRNLKLFPQVSQASF-CSCEAAPPAPASPSPSASLKSM 162
                SS   W   +  W      +  + P  S AS   S  +AP    S SPS S  S 
Sbjct: 261 SRASTSSDSGWASSSASWDSITSDSGWVCPSASWASSSASWASAPSDSGSSSPSVSRAST 320

Query: 163 SLVAKSRSRLWLLDASSSAPS----ASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVA 218
             V+   S      + +SAPS     S   S V  +S   W SP    +  + ++  A  
Sbjct: 321 LSVSGWAS---FSASGASAPSDSGWTSHSASGVSTTSDSGWASPSASGASTSSDSGWASP 377

Query: 219 CSTGASPATWRSSVAPSD 236
            ++ ASP+   +S  PSD
Sbjct: 378 SASWASPSASGAS-TPSD 394



 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 55/200 (27%), Positives = 80/200 (40%), Gaps = 21/200 (10%)

Query: 50  SAALSPSEGPSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFS 109
           S++ S +  PS S     + +  +  +DS  ++  + G S+ S +GW   SA  A  P  
Sbjct: 22  SSSASGASTPSNSGWASPSASGASIPSDSGWASPSASGASTPSNSGWASFSASWASIPSD 81

Query: 110 SLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCE--AAPPAPASPSPSASLKSMSLVAK 167
           S   W   +  W      +    P  S AS  S    A+P    +  PSA   S S    
Sbjct: 82  S--GWASPSASWASTPSDSGWASPSASGASIPSDSGWASPSVSGASIPSAFWASPSASGA 139

Query: 168 SRSRLWLLDASSSAPSASPVLSSVP---CSSSGSWLSPRPCSSRCTGEAVSAVACSTGAS 224
           S       D+  ++PSAS   +S      S S SW SP    +  +    S  + S  AS
Sbjct: 140 STPS----DSGWASPSASWASTSSDSGWASPSASWTSPSASCASSSASGASTPSDSGWAS 195

Query: 225 PA--------TWRSSVAPSD 236
           P+        +W SS  PSD
Sbjct: 196 PSVFWVSPSTSWASS--PSD 213



 Score = 36.6 bits (83), Expect = 0.056
 Identities = 51/185 (27%), Positives = 74/185 (40%), Gaps = 21/185 (11%)

Query: 85  SGGFSSCSGAGWGPSSAVLAPSPF-------SSLGSWRPCAFRWRLRVPRNLKLFPQVSQ 137
           + G S+ SG+GW  SSA  A +P        S+ G+  P    W                
Sbjct: 9   ASGVSTPSGSGWASSSASGASTPSNSGWASPSASGASIPSDSGWASPSASGASTPSNSGW 68

Query: 138 ASFCSCEAAPPAP---ASPSPS-ASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPC 193
           ASF +  A+ P+    ASPS S AS  S S  A   +    + + S   S S   +S+P 
Sbjct: 69  ASFSASWASIPSDSGWASPSASWASTPSDSGWASPSASGASIPSDSGWASPSVSGASIP- 127

Query: 194 SSSGSWLSPRPCSSRC---TGEAVSAVACSTGASPATWRSSVA----PSDGCSLSREEDQ 246
             S  W SP    +     +G A  + + ++ +S + W S  A    PS  C+ S     
Sbjct: 128 --SAFWASPSASGASTPSDSGWASPSASWASTSSDSGWASPSASWTSPSASCASSSASGA 185

Query: 247 DDPGD 251
             P D
Sbjct: 186 STPSD 190



 Score = 32.7 bits (73), Expect = 0.81
 Identities = 38/115 (33%), Positives = 45/115 (39%), Gaps = 23/115 (20%)

Query: 54  SPSEGPSVSSAG---------FSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLA 104
           S S  PSVS A          FSA  + AP     TS   SG  S+ S +GW   SA  A
Sbjct: 308 SGSSSPSVSRASTLSVSGWASFSASGASAPSDSGWTSHSASG-VSTTSDSGWASPSASGA 366

Query: 105 PSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCE--AAPPAPASPSPSA 157
            +  SS   W   +  W           P  S AS  S    A+P A  +  PSA
Sbjct: 367 ST--SSDSGWASPSASW---------ASPSASGASTPSDSGWASPSASGASMPSA 410


>gi|41281612 zinc finger protein 828 [Homo sapiens]
          Length = 812

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 64/243 (26%), Positives = 87/243 (35%), Gaps = 49/243 (20%)

Query: 42  SLFSEDLFSAALSPSEGPSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSA 101
           S F E L   + S  E P ++++    G SPA   +S  SA  +             S  
Sbjct: 231 SHFPETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTT-------------SPE 277

Query: 102 VLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKS 161
              PSP  S   W+P               FP VS        A  P    P P  S + 
Sbjct: 278 PRKPSPSESPEPWKP---------------FPAVSPEPRRPAPAVSPGSWKPGPPGSPRP 322

Query: 162 MSLVAKSRSRLWLLDASSSAPSASP-VLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACS 220
                 + S  W    +  APS SP     +P  S G W  P P  S       SA   S
Sbjct: 323 WKSNPSASSGPW--KPAKPAPSVSPGPWKPIPSVSPGPW-KPTPSVS-------SASWKS 372

Query: 221 TGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLP 280
           +  SP++W+S  A       S E  +  P +++K   +L   S        P++P L  P
Sbjct: 373 SSVSPSSWKSPPA-------SPESWKSGPPELRKTAPTL---SPEHWKAVPPVSPELRKP 422

Query: 281 PPP 283
            PP
Sbjct: 423 GPP 425


>gi|210031154 zinc finger protein 541 [Homo sapiens]
          Length = 1365

 Score = 46.2 bits (108), Expect = 7e-05
 Identities = 54/204 (26%), Positives = 75/204 (36%), Gaps = 32/204 (15%)

Query: 54  SPSEGPSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGS 113
           +PS GP+       AGAS + G ++      S G SSC+ A  GP +   AP+   +   
Sbjct: 287 TPSPGPA------PAGASDSEGRNTACPCPASSGSSSCTPA--GPHA---APAALDTELP 335

Query: 114 WRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLW 173
             PC       +P+        +  +  + E   P P  P P  +L    L A+S +  W
Sbjct: 336 EEPC-------LPQKEPATDVFTAPNSRAAENGAPDPPEPEPDTAL----LQARSTAECW 384

Query: 174 LLDASSSAPSASPVL-------SSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPA 226
                 S P+  P+        SS P S S  WL   P   +  G  V  V     A P+
Sbjct: 385 --PEGGSVPACLPLFRGQTVPASSQPSSHSFQWLRNLPGCPKSKGNNVFVVH-KPSAVPS 441

Query: 227 TWRSSVAPSDGCSLSREEDQDDPG 250
              S   P        EE    PG
Sbjct: 442 REGSESGPGPSSGSPSEESPPGPG 465


>gi|33946327 nucleoporin 214kDa [Homo sapiens]
          Length = 2090

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 61/220 (27%), Positives = 91/220 (41%), Gaps = 26/220 (11%)

Query: 17  LQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSPSEGPSVSSAGFSAGASPAPGA 76
           + TF LL A  A     +VF F SSSL S     +A    E PS SS   S+ A+P PG 
Sbjct: 467 IATFSLLPAGGAP----TVFSFGSSSLKS-----SATVTGEPPSYSSGSDSSKAAPGPGP 517

Query: 77  DSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVS 136
            + +       F   S A   P+ A    +P ++  S+    F+  L         P VS
Sbjct: 518 STFS-------FVPPSKASLAPTPAASPVAPSAASFSFGSSGFKPTLESTP----VPSVS 566

Query: 137 QASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSS 196
             +     + PP+ ++   + S K  +    +      + +S SAP  SP  S+   ++S
Sbjct: 567 APNIAMKPSFPPSTSAVKVNLSEKFTAAATSTP-----VSSSQSAPPMSPFSSASKPAAS 621

Query: 197 GSWLSPRPCSSRCTGEAV-SAVACSTGASPATWRSSVAPS 235
           G    P P S+  +   + S+V  S     A   SS  PS
Sbjct: 622 GPLSHPTPLSAPPSSVPLKSSVLPSPSGRSAQGSSSPVPS 661



 Score = 38.1 bits (87), Expect = 0.019
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 10/77 (12%)

Query: 34   SVFGFLSSSLFSEDLFSAALSPSEGPSV----------SSAGFSAGASPAPGADSTTSAG 83
            SVFG  SS+  S        SP+ G  +           S GF  G S   G  + T+  
Sbjct: 1770 SVFGAASSTSSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTA 1829

Query: 84   VSGGFSSCSGAGWGPSS 100
             + GFS C  +G+G S+
Sbjct: 1830 ATSGFSFCQASGFGSSN 1846



 Score = 37.0 bits (84), Expect = 0.043
 Identities = 96/406 (23%), Positives = 145/406 (35%), Gaps = 74/406 (18%)

Query: 36   FGFLSSSLFSEDLFSAALSPSEGPSVSSAGFSAGASPAPG----ADSTTSAGVSGGFSSC 91
            FG ++ +  S    +   +PS   S     FS+G    P      +S+  +G++   ++ 
Sbjct: 1225 FGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTT 1284

Query: 92   SGAGWGPSSAVLAPS--PFSSLGSWRPCAFRWRLRVPRNL---KLFPQ----VSQASFCS 142
             G     SS  +APS    S+  S        +L  P +     LFP      +  SF  
Sbjct: 1285 PGEPAASSSRPVAPSGTALSTTSS--------KLETPPSKLGELLFPSSLAGETLGSFSG 1336

Query: 143  CEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPS-----ASPVLSSVPCSSSG 197
                  A  S  P+    S SL +   ++      +S  PS     A PVL        G
Sbjct: 1337 LRVG-QADDSTKPTNKASSTSLTSTQPTK------TSGVPSGFNFTAPPVL--------G 1381

Query: 198  SWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKS 257
                P P +S  T  +V+  A ++ +S A + S    S G S          G +  G +
Sbjct: 1382 KHTEP-PVTSSATTTSVAPPAATSTSSTAVFGSLPVTSAGSS----------GVISFGGT 1430

Query: 258  SLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFSMLANSPLESRFTPPLLA 317
            SL      F   +   N  +P   PP                   A +PL + F  P L+
Sbjct: 1431 SLSAGKTSFSFGSQQTNSTVPPSAPP----------------PTTAATPLPTSF--PTLS 1472

Query: 318  RGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGLVVAAGVAVVAALGTEPP 377
             G LL     P    + AG  +    +S L    G S  S            A L   PP
Sbjct: 1473 FGSLLSSATTP-SLPMSAGRSTEEATSSALPEKPGDSEVSASAASLLEEQQSAQLPQAPP 1531

Query: 378  KLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGSSSV 423
            + S++V   PVLA P  +    S   A  T  +  + EA+  ++ V
Sbjct: 1532 QTSDSVKKEPVLAQPAVSN---SGTAASSTSLVALSAEATPATTGV 1574



 Score = 35.0 bits (79), Expect = 0.16
 Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 25/216 (11%)

Query: 23   LSALLATLLGESVFGFL-------SSSLFSEDLFSAALSPSEGPSVSSAGF---SAGASP 72
            +SA  A+LL E     L       S S+  E + +     + G + SS      SA A+P
Sbjct: 1510 VSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAEATP 1569

Query: 73   APGA--DSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLK 130
            A     D+ T A       S  G     ++A+ +  P +   S  P A      V     
Sbjct: 1570 ATTGVPDARTEAVPPASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTSIVAPG-- 1627

Query: 131  LFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSS 190
              P    A+F +  +     A P  ++S  + + +  +         +++APSA+PV   
Sbjct: 1628 --PSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNN---------TATAPSATPVFGQ 1676

Query: 191  VPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPA 226
            V  S++ S    +  S+  T  A   V+ S  +SPA
Sbjct: 1677 VAASTAPSLFGQQTGSTASTAAATPQVSSSGFSSPA 1712



 Score = 32.7 bits (73), Expect = 0.81
 Identities = 43/143 (30%), Positives = 56/143 (39%), Gaps = 13/143 (9%)

Query: 97  GPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPAS---P 153
           G  S +  P   S  G  +P       + P +    P  SQA      +A  APAS    
Sbjct: 409 GVKSLIKTPERLSLEGERQP-------KSPGSTPTTPTSSQAPQKLDASAAAAPASLPPS 461

Query: 154 SPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLS-PRPCSSRCTGE 212
           SP+A + + SL+    +       SSS  S++ V    P  SSGS  S   P     T  
Sbjct: 462 SPAAPIATFSLLPAGGAPTVFSFGSSSLKSSATVTGEPPSYSSGSDSSKAAPGPGPSTFS 521

Query: 213 AVSAVACSTGASPATWRSSVAPS 235
            V     S   +PA   S VAPS
Sbjct: 522 FVPPSKASLAPTPAA--SPVAPS 542



 Score = 30.8 bits (68), Expect = 3.1
 Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 12/88 (13%)

Query: 32   GESVFGFLSSSLFSEDLFSAALSPSEGPSVSSAGF-------SAGASPAPGADSTTSAGV 84
            G   FG  +SS F E   +   S S G SV+S GF       + G   AP   S  + G 
Sbjct: 1926 GAKTFGGFASSSFGEQKPTGTFS-SGGGSVASQGFGFSSPNKTGGFGAAPVFGSPPTFGG 1984

Query: 85   SGGFSSCSGAGWGPSSAVLAPSPFSSLG 112
            S GF      G  P+      SP  S G
Sbjct: 1985 SPGFGGVPAFGSAPAFT----SPLGSTG 2008


>gi|28559039 mediator complex subunit 1 [Homo sapiens]
          Length = 1581

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 68/236 (28%), Positives = 99/236 (41%), Gaps = 38/236 (16%)

Query: 45   SEDLFSAALSPSEGPSVSSAGFSAGASPA-PGADSTTSAGVSGGFSSCSGAGWGPSSAVL 103
            S    S+++  S+G S SS   ++  S   PG+   T  G+S G SS      G  S+++
Sbjct: 1123 SSSKLSSSMYSSQGSSGSSQSKNSSQSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSSLM 1182

Query: 104  APS---PFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLK 160
             PS   P  S    RP     +L  P                     P P +P PS+  K
Sbjct: 1183 NPSLSKPNISPSHSRPPGGSDKLASPMK-------------------PVPGTP-PSSKAK 1222

Query: 161  SMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPR--PCSSRCTGEAVSAVA 218
            S        S +      S   S+S + SS    SSGS LS +  P S+ CT  A S+  
Sbjct: 1223 SPISSGSGGSHM------SGTSSSSGMKSSSGLGSSGS-LSQKTPPSSNSCT--ASSSSF 1273

Query: 219  CSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLN 274
             S+G+S ++ ++    S G S SR +       + K K  + +TSG  PG   PL+
Sbjct: 1274 SSSGSSMSSSQNQHGSSKGKSPSRNKKPSLTAVIDKLKHGV-VTSG--PGGEDPLD 1326


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 74/283 (26%), Positives = 113/283 (39%), Gaps = 51/283 (18%)

Query: 55  PSEGP--SVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVL---APSPFS 109
           P+EGP  SVSSA   +   P+P A    SAG  GG    +      S+  L   A S  S
Sbjct: 201 PTEGPRKSVSSASEHSTTEPSPAARRRPSAG--GGLQRPASRSLSSSATPLSSPARSGPS 258

Query: 110 SLGSWRPCAFRWRLRVPRNLKLF--PQVSQASFCSCEAAPPAP----ASPSPSASLKSM- 162
           + G+ R  A   + + P+ L+    PQV+     +  A  P      A+PSPSA+L+S  
Sbjct: 259 ARGTPRAPAHPSQPK-PKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQA 317

Query: 163 -----------SLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTG 211
                      SL  +  + L L   S SAP +   L S P +       P   ++    
Sbjct: 318 PPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPAT------PPSQATTSLGS 371

Query: 212 EAVSAVACSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGVFPGLAV 271
             + A      + P +  ++  P    +L+    Q  P                 P  + 
Sbjct: 372 PTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPS----------------PPASP 415

Query: 272 PLNPWLPLPPPPGRNGLNLLVSVVASIFSMLANSPLESRFTPP 314
           PL+P L  P P   N   L V ++ + FS   + P+++ F+PP
Sbjct: 416 PLSP-LATPSPQAPNA--LAVHLLQAPFSPPPSPPVQAPFSPP 455



 Score = 34.7 bits (78), Expect = 0.21
 Identities = 81/315 (25%), Positives = 110/315 (34%), Gaps = 64/315 (20%)

Query: 37  GFLSSSLFSEDLFSAALSPSEGPSVSSAGFSAG-----ASPAPGADSTTSAGVSGGFSSC 91
           G LSSS  +    SAAL     P++ +   S+      A+P P A  + SA         
Sbjct: 297 GPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSA--------- 347

Query: 92  SGAGWGPSSAVLAPSP--------FSSLGSWRPCAFRWRLRVPRNLKLF---PQVSQASF 140
                 P S    PSP         +SLGS    A    L  P    L    PQ   A  
Sbjct: 348 ------PPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALA 401

Query: 141 CSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVL------SSVPCS 194
                APP+P +  P + L + S  A +   + LL A  S P + PV       +S P S
Sbjct: 402 LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS 461

Query: 195 SSGSWLSPRPCSSRCTGEAV-----SAVACSTGASPATWRSSVAPSDGCSLSREEDQDDP 249
            S +  S  P S       V     ++   S  A+P         +    L++   Q  P
Sbjct: 462 PSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPP 521

Query: 250 GDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFSMLANSPLES 309
                   +L      FPG A P +P   LP  P                  LA  P ++
Sbjct: 522 ALATPPLQALPSPPASFPGQA-PFSPSASLPMSP------------------LATPPPQA 562

Query: 310 RFTPPLLARGRLLIP 324
              PP+LA   L +P
Sbjct: 563 ---PPVLAAPLLQVP 574



 Score = 29.3 bits (64), Expect = 9.0
 Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 2/32 (6%)

Query: 70  ASPAPGA-DSTTSAGVSGGFSSCSGAGWGPSS 100
           A+PAPGA D   S G SGG  + +GAG G SS
Sbjct: 715 ATPAPGALDPGPSPGTSGG-KAAAGAGAGASS 745


>gi|239749196 PREDICTED: hypothetical protein XP_002346951 [Homo
           sapiens]
          Length = 528

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 17/162 (10%)

Query: 129 LKLFPQVSQASFCSCEAAPPA--PASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASP 186
           L L P++  A FC C+   PA  P+   PSA++  +++ A+S SR       +S P AS 
Sbjct: 173 LSLPPEL--ADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSR--RRRVGTSGPEAST 228

Query: 187 VLSSV-------PCSSSGSWLSP-RPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGC 238
           + S +       P ++ G    P R  SSR    A   + C +  +P+      +P+ G 
Sbjct: 229 LSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASG- 287

Query: 239 SLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLP 280
                     PG  + G +S   T    PG   P    L +P
Sbjct: 288 --PDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIP 327


>gi|239743276 PREDICTED: hypothetical protein XP_002342815 [Homo
           sapiens]
          Length = 528

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 17/162 (10%)

Query: 129 LKLFPQVSQASFCSCEAAPPA--PASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASP 186
           L L P++  A FC C+   PA  P+   PSA++  +++ A+S SR       +S P AS 
Sbjct: 173 LSLPPEL--ADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSR--RRRVGTSGPEAST 228

Query: 187 VLSSV-------PCSSSGSWLSP-RPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGC 238
           + S +       P ++ G    P R  SSR    A   + C +  +P+      +P+ G 
Sbjct: 229 LSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASG- 287

Query: 239 SLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLP 280
                     PG  + G +S   T    PG   P    L +P
Sbjct: 288 --PDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIP 327


>gi|239508959 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 528

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 17/162 (10%)

Query: 129 LKLFPQVSQASFCSCEAAPPA--PASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASP 186
           L L P++  A FC C+   PA  P+   PSA++  +++ A+S SR       +S P AS 
Sbjct: 173 LSLPPEL--ADFCLCQRVSPASCPSRSCPSAAVFILAVAARSCSR--RRRVGTSGPEAST 228

Query: 187 VLSSV-------PCSSSGSWLSP-RPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGC 238
           + S +       P ++ G    P R  SSR    A   + C +  +P+      +P+ G 
Sbjct: 229 LSSGLLTCSAGEPPTTGGKLTGPARLRSSRAPPPARRPLPCESLRTPSGTAGPRSPASG- 287

Query: 239 SLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLP 280
                     PG  + G +S   T    PG   P    L +P
Sbjct: 288 --PDARGAPTPGRARGGGASWSATPTTIPGPGPPRPQLLVIP 327


>gi|122692281 hypothetical protein LOC645369 [Homo sapiens]
          Length = 621

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 15/225 (6%)

Query: 42  SLFSEDLFSAALSPSEGPSVSSAGFSAGASPAPGA---DSTTSAGVSGGFSSCSGAGWGP 98
           SL ++DL +AA + +   + SS+  SA A+  PGA   +   S   S G     G G G 
Sbjct: 212 SLRAKDLAAAAAAAAAAAASSSS--SAPAAAPPGAIPLNGFLSYVQSRGLELKPG-GCGG 268

Query: 99  SSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSAS 158
           S      +   + GSW P         PR     P ++ +  C  E  PP+ A    S  
Sbjct: 269 SGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPRE--PPSLAEAVYSV- 325

Query: 159 LKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVA 218
            +  S VA SR       A+++A +AS   S  PCS   SW   +  +S     ++SA A
Sbjct: 326 YRERSGVAGSRRAA----AATAAAAASSCSSPAPCSPPESW-GRQSTASSFVDSSLSAFA 380

Query: 219 CSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITS 263
                     R   A    CS  R   +    ++ +G+  L +T+
Sbjct: 381 L-LPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTN 424


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 66/247 (26%), Positives = 86/247 (34%), Gaps = 58/247 (23%)

Query: 56   SEGPSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWR 115
            SE  S SS+G S+ +S +  + S T     G  +   G G G                 R
Sbjct: 2557 SESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGG----------------R 2600

Query: 116  PCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLL 175
             C                     S  S  AA PA +S S S+S  S S  + S S     
Sbjct: 2601 NC---------------------SAASSRAASPASSSSSSSSSSSSSSSSSSSSSS--SS 2637

Query: 176  DASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPS 235
             +SSS+ S+S   SS   SSS S  S    SS  T +  S+ +    A+P       AP+
Sbjct: 2638 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAP-------APT 2690

Query: 236  DGCSLSREEDQDDPGDVKKGKSSLHITSGVFPG---LAVPLNPWLPLPP---------PP 283
             G S              K + S H      P     A P  P  PL P         P 
Sbjct: 2691 AGPSAQAALPTKATKQAGKARPSAHSPGKKTPAPQPQAPPPQPTQPLQPKAQAGAKSRPK 2750

Query: 284  GRNGLNL 290
             R G++L
Sbjct: 2751 KREGVHL 2757



 Score = 33.1 bits (74), Expect = 0.62
 Identities = 36/123 (29%), Positives = 50/123 (40%), Gaps = 9/123 (7%)

Query: 57   EGPSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAV----LAPSPFSSLG 112
            EG    +AG     + A G     SA   G  ++    G  P+  V    LA  P S+ G
Sbjct: 2313 EGKDGGTAGSEEPGAKARGRGRKPSAKAKGDRAATLEEG-NPTDEVPSTPLALEPSSTPG 2371

Query: 113  SWR--PCAFRWRLRVPRNLKLFPQVSQA--SFCSCEAAPPAPASPSPSASLKSMSLVAKS 168
            S +  P     R + P+     PQ S A  +F SC A  P    P+P+ SL    L+   
Sbjct: 2372 SKKSPPEPVDKRAKAPKARPAPPQPSPAPPAFTSCPAPEPFAELPAPATSLAPAPLITMP 2431

Query: 169  RSR 171
             +R
Sbjct: 2432 ATR 2434



 Score = 32.7 bits (73), Expect = 0.81
 Identities = 41/142 (28%), Positives = 49/142 (34%), Gaps = 17/142 (11%)

Query: 142  SCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLS 201
            S  A  P    P PS+  K+   V K R    L         A P       S    W  
Sbjct: 1942 SLAAPTPGARGPDPSSPDKAKLAVEKGRKARKLRGPKEPGFEAGP-----EASDDDLWTR 1996

Query: 202  PRPCSSRC-TGEAVSAVACSTGASPATWRSSVAPSDGCS----LSREEDQDDPGDVKKGK 256
             R  S R    +A +A       +PAT  S  A     S      R +D+ DP   KKGK
Sbjct: 1997 RR--SERIFLHDASAAAPAPVSTAPATKTSRCAKGGPLSPRKDAGRAKDRKDPRKKKKGK 2054

Query: 257  SSLHITSGVFPGLAVPLNPWLP 278
                  +G   GL  P  P LP
Sbjct: 2055 E-----AGPGAGLPPPRAPALP 2071



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 21/122 (17%)

Query: 40   SSSLFSEDLFSAALSPSEGPSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPS 99
            SSS  S    S++ S S   S SS+  S+ +S +  + S++S+  +   SSCS       
Sbjct: 2628 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAP 2687

Query: 100  SAVLAPSPFSSL--------GSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPA 151
            +    PS  ++L        G  RP A     + P      PQ         +A PP P 
Sbjct: 2688 APTAGPSAQAALPTKATKQAGKARPSAHSPGKKTPA-----PQP--------QAPPPQPT 2734

Query: 152  SP 153
             P
Sbjct: 2735 QP 2736



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 38/161 (23%), Positives = 54/161 (33%), Gaps = 11/161 (6%)

Query: 37   GFLSSSLFSEDLFSAALSPSEGPSVSSAGFSAG-----------ASPAPGADSTTSAGVS 85
            G  SSS  S    S      EG      G   G           ASPA  + S++S+  S
Sbjct: 2566 GSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSS 2625

Query: 86   GGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEA 145
               SS S +    SS+  + S  SS  S    +         +         +     EA
Sbjct: 2626 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEA 2685

Query: 146  APPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASP 186
            AP   A PS  A+L + +     ++R          P+  P
Sbjct: 2686 APAPTAGPSAQAALPTKATKQAGKARPSAHSPGKKTPAPQP 2726


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 70/267 (26%), Positives = 99/267 (37%), Gaps = 49/267 (18%)

Query: 55  PSEGP--SVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPS--PFSS 110
           P+EGP  SVSSA   +   P+P A    SAG  GG          P+S  L+ S  P SS
Sbjct: 192 PTEGPRKSVSSASEHSTTEPSPAARRRPSAG--GGLQR-------PASRSLSSSATPLSS 242

Query: 111 LGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSA--SLKSMSLVAKS 168
                                 P  S  S      AP  P+ P P    +L+   +    
Sbjct: 243 ----------------------PARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPR 280

Query: 169 RSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATW 228
           +     L   SS+P A+P  S+ P  S+   L   P          S    S G+     
Sbjct: 281 KDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSP---PATPPSQATTSLGSPTLQA 337

Query: 229 RSSVAPSDGCS-LSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNG 287
             S  PS   S L+    Q  P       +   + +   P  + PL+P L  P P   N 
Sbjct: 338 THSFLPSPPLSPLATPPPQAPP-----ALALPPLQAPPSPPASPPLSP-LATPSPQAPNA 391

Query: 288 LNLLVSVVASIFSMLANSPLESRFTPP 314
             L V ++ + FS   + P+++ F+PP
Sbjct: 392 --LAVHLLQAPFSPPPSPPVQAPFSPP 416



 Score = 36.2 bits (82), Expect = 0.073
 Identities = 76/299 (25%), Positives = 106/299 (35%), Gaps = 62/299 (20%)

Query: 37  GFLSSSLFSEDLFSAALSPSEGPSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGW 96
           G LSSS  +    SA  SPS  PS+ +        P+P A   + A  S G  +      
Sbjct: 288 GPLSSSPLATPSPSAPPSPSAPPSLQTL-------PSPPATPPSQATTSLGSPTLQA--- 337

Query: 97  GPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPS 156
             + + L   P S L +  P A       P  L L P            APP+P +  P 
Sbjct: 338 --THSFLPSPPLSPLATPPPQA-------PPALALPPL----------QAPPSPPASPPL 378

Query: 157 ASLKSMSLVAKSRSRLWLLDASSSAPSASPVL------SSVPCSSSGSWLSPRPCSSRCT 210
           + L + S  A +   + LL A  S P + PV       +S P S S +  S  P S    
Sbjct: 379 SPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAP 438

Query: 211 GEAV-----SAVACSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGV 265
              V     ++   S  A+P         +    L++   Q  P        +L      
Sbjct: 439 PLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPAS 498

Query: 266 FPGLAVPLNPWLPLPPPPGRNGLNLLVSVVASIFSMLANSPLESRFTPPLLARGRLLIP 324
           FPG A P +P   LP  P                  LA  P ++   PP+LA   L +P
Sbjct: 499 FPGQA-PFSPSASLPMSP------------------LATPPPQA---PPVLAAPLLQVP 535



 Score = 29.3 bits (64), Expect = 9.0
 Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 2/32 (6%)

Query: 70  ASPAPGA-DSTTSAGVSGGFSSCSGAGWGPSS 100
           A+PAPGA D   S G SGG  + +GAG G SS
Sbjct: 676 ATPAPGALDPGPSPGTSGG-KAAAGAGAGASS 706


>gi|111120318 NK6 transcription factor related, locus 1 [Homo
           sapiens]
          Length = 367

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 62/228 (27%), Positives = 88/228 (38%), Gaps = 47/228 (20%)

Query: 16  TLQTFFLLSALLATLLGESVFGFLSSSLFSEDLFSAALSP-SEGPSVSSAGFSAGASPAP 74
           T Q+ FLLS+     L        S +     L+ AA  P   GP  SS+  S+ +SP+P
Sbjct: 10  TRQSAFLLSSPPLAALH-------SMAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSP 62

Query: 75  GADSTTSAGV----SGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLK 130
              +    G+    +GG SS               SP   L +  P      L  P    
Sbjct: 63  PLGTHNPGGLKPPATGGLSSLG-------------SPPQQLSAATPHGINDILSRPS--- 106

Query: 131 LFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASP--VL 188
             P  S A+  S        ASPS S+S  S S  A S S      A+++A ++SP  +L
Sbjct: 107 -MPVASGAALPS--------ASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLL 157

Query: 189 SSVPCSSS--------GSWLSPRPCSSRCTGEAVSAVACSTGASPATW 228
           + +P  SS        G + SP   +    G     +A   G +P  W
Sbjct: 158 AGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFW 205


>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
          Length = 2817

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 15/140 (10%)

Query: 59   PSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCA 118
            P ++S      ASP     ++ S   S   S+ + A    S+   AP+P   L S     
Sbjct: 1792 PVLASTSAPVPASPLAPVSASASVSASVPASTSAAAITSSSAPASAPAPTPILAS----- 1846

Query: 119  FRWRLRVPRNLKLFPQVS----QASFCSCEAAPPAPASPSPSASLKSMSLVAKS--RSRL 172
                +  P ++ +    S     ++  S  A  PAPA+ SP+A + +   +  S   + +
Sbjct: 1847 ----VSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITAPTIPASAPTASV 1902

Query: 173  WLLDASSSAPSASPVLSSVP 192
             L  AS+SAP+ +P   S P
Sbjct: 1903 PLAPASASAPAPAPTPVSAP 1922



 Score = 35.0 bits (79), Expect = 0.16
 Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 16/120 (13%)

Query: 125  VPRNLKLFPQVSQASFCSCEAAP-------PAPASP----SPSASLKSMSLVAKSRSRLW 173
            +P  L   P  + A   +   AP       P PASP    S SAS+ +    + S + + 
Sbjct: 1770 LPATLTPVPASTSAPVPASTLAPVLASTSAPVPASPLAPVSASASVSASVPASTSAAAIT 1829

Query: 174  LLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVA 233
               A +SAP+ +P+L+SV   +S + L     +S       SA+A ++  +PA   SS A
Sbjct: 1830 SSSAPASAPAPTPILASVSTPASVTIL-----ASASIPILASALASTSAPTPAPAASSPA 1884



 Score = 32.7 bits (73), Expect = 0.81
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)

Query: 142  SCEAAPP---APASPSPSASLKSMSLVAKSRSRLWLLDASSSAP----SASPVLSSVPCS 194
            S  + PP   AP  PS SAS+ + S  A   + L  + AS+SAP    + +PVL+S    
Sbjct: 1742 SSASVPPLASAPLPPSTSASVPA-STSAPLPATLTPVPASTSAPVPASTLAPVLASTSAP 1800

Query: 195  SSGSWLSPRPCSSRCTGE---AVSAVACSTGASPAT 227
               S L+P   S+  +     + SA A ++ ++PA+
Sbjct: 1801 VPASPLAPVSASASVSASVPASTSAAAITSSSAPAS 1836


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 85/321 (26%), Positives = 115/321 (35%), Gaps = 50/321 (15%)

Query: 153 PSPSASLKSMSLVAKSRSRLWLLDASSSAPS------ASPVLSSVPCSSS-GSWLSPRPC 205
           P PSAS    SL+++ RS  W     +  P+      A P  S+ P SS+  ++  P   
Sbjct: 102 PGPSAS----SLLSQFRSPSWQTAMHTPGPTELFISGALPGSSTFPSSSALSAYQHPASF 157

Query: 206 SSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSLSREEDQDDPGDV---KKGKSSLHIT 262
            SR      S        SP      ++P D   L   +    P  +   +     +   
Sbjct: 158 GSRPFPVPSSLSLQDPPFSPPA-NGLLSPHDVLHLKPSQAPTVPSSLGFERLAGGGVLGP 216

Query: 263 SGVFPGLAVPLNPWLPLPPPPGRN---GLNLLVSVVASIFSMLANSPLESRFT------- 312
           +G+ P    P  P  P PPPP R+     NLL S  A+  +   +SP    F+       
Sbjct: 217 AGLGPAQTPPYRPGPPDPPPPPRHLPTQFNLLASSSAAAAAAEQSSPQLYNFSGAAPGPP 276

Query: 313 PP--LLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLLAGAGGSLDSFGLVVAAGVAVVA 370
           PP   L R   +I  ++      P  P     A    L+  GGS  S G    A +A   
Sbjct: 277 PPERALPRQDTVIKHYQRPASAQPPPPPPPAHALQHYLS-CGGSYPSMGH--RANLACSP 333

Query: 371 ALGTEP-PKLSEAVVLLPVLAGPGSATLVFSRVGAEDTDEMIWAMEASGGSSSVT----- 424
             G EP P   E     P  AGP  AT   S  G     E      A GG          
Sbjct: 334 LGGGEPSPGAGE-----PSKAGPSGATAGAS--GRATGPEAAGGGGAGGGGGGYRPIIQS 386

Query: 425 -------GGFGKSSGGLGRRP 438
                  GG+G ++GG  R P
Sbjct: 387 PGYKTGKGGYGAAAGGATRPP 407



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 69  GASPAPGADSTTSAGVSGGFSSCSGAGWGPSSA 101
           G  P+PGA   + AG SG  +  SG   GP +A
Sbjct: 336 GGEPSPGAGEPSKAGPSGATAGASGRATGPEAA 368



 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 6/53 (11%)

Query: 48  LFSAALSPSEGPSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSS 100
           L+     P  GP+  S G    ASP+    +  S  +SG      G GWGPSS
Sbjct: 506 LYGVQGEPYPGPAAHSQGLPT-ASPSLSYSTGHSPALSG-----HGGGWGPSS 552


>gi|239757559 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 196

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 48/197 (24%), Positives = 64/197 (32%), Gaps = 66/197 (33%)

Query: 119 FRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDAS 178
           F     +P+N+ ++   S+            PA PS  A+  S +   ++ SR      S
Sbjct: 24  FMCMFSLPQNMAIWGSASR------------PALPSVGAAPTSSARAVQAASR------S 65

Query: 179 SSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVS------AVACSTGASP------- 225
           S+ P +   L   P +    W  PRPCS+R    AVS      + ACS    P       
Sbjct: 66  SAKPGSIATLRGAPSALLCEWDPPRPCSARAATAAVSRGPRARSSACSRLPLPRKLTEPE 125

Query: 226 -------------------ATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGVF 266
                                 R   AP   C+ SR E    P                 
Sbjct: 126 RGGGAQSQASQLIRPTPLGTRERPLAAPPGNCARSRREGPSRPA---------------- 169

Query: 267 PGLAVPLNPWLPLPPPP 283
           P  A PL P  P  PPP
Sbjct: 170 PTGAAPLAPPAPHAPPP 186


>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
           sapiens]
          Length = 288

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 36/166 (21%)

Query: 99  SSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCS----------CEAAPP 148
           S+ V+ PS  +   +WRP A    +R P      P  + A+ C           C A+PP
Sbjct: 81  SAPVVVPSALTRAVAWRPAAAPAAVRPPAAGP--PAAAPAAVCPAAADPSAASLCAASPP 138

Query: 149 A------------PASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSS 196
           A            PA+  P+A+L ++   A         D S+++  A+  L++VP ++S
Sbjct: 139 AAVPAAVPAAVRPPAAGPPAAALAAVYPAA--------ADPSAASLCAASPLAAVPAAAS 190

Query: 197 GSWLSPRPCSSRCTGEA-VSAVACSTGASPATWRSSVAPSDGCSLS 241
            + ++P   ++ C G A  SA +    + PA   ++ +P+    L+
Sbjct: 191 PAAVAP---AAVCPGAAGPSAASLCAASQPAAVPAAASPAAAAPLA 233


>gi|89276766 trophinin isoform 5 [Homo sapiens]
          Length = 1431

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 49  FSAALSPS-EGPSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSP 107
           FS  +S S  GP  +SA FS GAS   G   +T+AG SG  S+ +  G  P+++ +  S 
Sbjct: 823 FSGGVSSSFSGPLSTSATFSGGASSGFGGTLSTTAGFSGVLSTSTSFGSAPTTSTVFSSA 882

Query: 108 FSS 110
            S+
Sbjct: 883 LST 885



 Score = 34.7 bits (78), Expect = 0.21
 Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 17/106 (16%)

Query: 27   LATLLGESVFGFLSSSLFSEDLFSAALSPSEGPSVSSAGFSAGASPAPGADS-------- 78
            L+T++G       S+    E   S   S   GPS S  GFS G S   G  S        
Sbjct: 1331 LSTIIGFGSGSNTSTGFTGEPSTSTGFS--SGPS-SIVGFSGGPSTGVGFCSGPSTSGFS 1387

Query: 79   ---TTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFRW 121
               +T AG  GG ++ +G G GPS++    S  +SLG+   C F +
Sbjct: 1388 GGPSTGAGFGGGPNTGAGFGGGPSTSAGFGSGAASLGA---CGFSY 1430



 Score = 33.5 bits (75), Expect = 0.48
 Identities = 48/181 (26%), Positives = 69/181 (38%), Gaps = 16/181 (8%)

Query: 62  SSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAV-LAPSPFSSLGSWRPCAFR 120
           ++  FS GAS   G     S   +G  SS  G   GP     +APS  +S  +    +F 
Sbjct: 719 TNVNFSRGASTRAGFSDGASISFNGAPSSSGGFSGGPGITFGVAPSTSASFSNTASISFG 778

Query: 121 WRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSS 180
             L    +       S A+  S   A     S S  AS+    +   S S    + +S S
Sbjct: 779 GTLSTSSSF------SSAASISFGCAHSTSTSFSSEASISFGGMPCTSASFSGGVSSSFS 832

Query: 181 AP-SASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPAT---WRSSVAPSD 236
            P S S   S    S  G  LS     S      V + + S G++P T   + S+++ S 
Sbjct: 833 GPLSTSATFSGGASSGFGGTLSTTAGFS-----GVLSTSTSFGSAPTTSTVFSSALSTST 887

Query: 237 G 237
           G
Sbjct: 888 G 888



 Score = 33.5 bits (75), Expect = 0.48
 Identities = 32/81 (39%), Positives = 37/81 (45%), Gaps = 18/81 (22%)

Query: 49   FSAALSPS--EGPSVSSAGFSAG--------------ASPAPGADSTTSAGVSGGFSSCS 92
            FS A SPS  +GPS S+ GFS G               S   G    TSAG SGG S+ S
Sbjct: 1179 FSGATSPSFCDGPSTST-GFSFGNGLSTNAGFGGGLNTSAGFGGGLGTSAGFSGGLSTSS 1237

Query: 93   GAGWG-PSSAVLAPSPFSSLG 112
            G   G  +SA     P +S G
Sbjct: 1238 GFDGGLGTSAGFGGGPGTSTG 1258



 Score = 32.0 bits (71), Expect = 1.4
 Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 49   FSAALSPS---EGPSVSSAGFSAG--ASPAPGADSTTSAGVSGGFSSCSGAGWG 97
            FS  LS S   +G   +SAGF  G   S   G    TSAG SGG  + +G G G
Sbjct: 1229 FSGGLSTSSGFDGGLGTSAGFGGGPGTSTGFGGGLGTSAGFSGGLGTSAGFGGG 1282



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 49   FSAALSPSEGPS---VSSAGFSAGASPAPGADST--TSAGVSGGFSSCSGAGWGPSSA 101
            FS  L  S G     V+S GF  G        ST  TSAG SGG S+  G G  P+++
Sbjct: 1269 FSGGLGTSAGFGGGLVTSDGFGGGLGTNASFGSTLGTSAGFSGGLSTSDGFGSRPNAS 1326



 Score = 31.2 bits (69), Expect = 2.4
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 62   SSAGFSAGASPAPGADS--TTSAGVSGGFSSCSGAGWG 97
            +SAGFS G S + G D    TSAG  GG  + +G G G
Sbjct: 1225 TSAGFSGGLSTSSGFDGGLGTSAGFGGGPGTSTGFGGG 1262



 Score = 29.6 bits (65), Expect = 6.9
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 8/72 (11%)

Query: 49   FSAALSPS---EGPSVSSAGFSAG--ASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAV- 102
            F  A+S S    G   +SA FS     +P  G   +TSAG  G  S+ +  G  PS+++ 
Sbjct: 1069 FGCAVSTSASFSGAVSTSACFSGAPITNPGFGGAFSTSAGFGGALSTAADFGGTPSNSIG 1128

Query: 103  --LAPSPFSSLG 112
               APS   S G
Sbjct: 1129 FGAAPSTSVSFG 1140



 Score = 29.3 bits (64), Expect = 9.0
 Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 42  SLFSEDLFSAALSPSEGPSVS-SAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSS 100
           +L +   FS+A S S G + S S  FS+ AS + G    TSA  SGG SS S +G   +S
Sbjct: 780 TLSTSSSFSSAASISFGCAHSTSTSFSSEASISFGGMPCTSASFSGGVSS-SFSGPLSTS 838

Query: 101 AVLAPSPFSSLG 112
           A  +    S  G
Sbjct: 839 ATFSGGASSGFG 850


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 83/328 (25%), Positives = 125/328 (38%), Gaps = 34/328 (10%)

Query: 50   SAALSPSEGPSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFS 109
            ++ ++P+  P +  A  SA ASP P A +   A  S                +LAP+  +
Sbjct: 1538 NSTVAPACSPVLVPA--SALASPFPSAPNPAPAQAS----------------LLAPASSA 1579

Query: 110  SLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSR 169
            S     P A    +  P+   L P  +         AP   A+P  ++S   + ++A S 
Sbjct: 1580 SQALATPLA---PMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSS 1636

Query: 170  SRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEA-VSAVACSTGASPATW 228
            +    L ++S  P+ +PVL+     SS   + P P  S     A    +A +   +P   
Sbjct: 1637 TPGTSLASASPVPAPTPVLA----PSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLG 1692

Query: 229  RSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPPGRNGL 288
             SS  PS   SL     Q   G       SL   S + P  A  L+   P PP      L
Sbjct: 1693 GSS--PSQTLSLGTGNPQ---GPFPTQTLSLTPASSLVPTPAQTLS-LAPGPPLGPTQTL 1746

Query: 289  NLLVSVVASIFSMLANSPLESRFTPPLLARGRLLIPLFRPLFFDVPAGPCSVGEAASGLL 348
            +L  +   +  S +  +P  +    P  +   LL P         PA   ++G AA+  L
Sbjct: 1747 SLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVPTLGPAAAQTL 1806

Query: 349  AGAGGSLDSFGLVVAAGVAVVAALGTEP 376
            A A  S  S      A   VV+A G  P
Sbjct: 1807 ALAPASTQS--PASQASSLVVSASGAAP 1832



 Score = 37.4 bits (85), Expect = 0.033
 Identities = 58/234 (24%), Positives = 89/234 (38%), Gaps = 41/234 (17%)

Query: 52   ALSPSEGPSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSL 111
            AL+P+ G S  S   S G     G   T +  ++            P+S+ L P+P  +L
Sbjct: 1686 ALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLT------------PASS-LVPTPAQTL 1732

Query: 112  GSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPP-APASPSPSASLKSMSLVAKSRS 170
                            +L   P +      S   APP APASP   A   +++L   S S
Sbjct: 1733 ----------------SLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSS 1776

Query: 171  RLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRC-TGEAVSAVACSTGASPATWR 229
               L  AS    + SP        ++   L+  P S++    +A S V  ++GA+P    
Sbjct: 1777 ASLLAPASVQTLTLSPAPVPTLGPAAAQTLALAPASTQSPASQASSLVVSASGAAP---- 1832

Query: 230  SSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLNPWLPLPPPP 283
              +  +    L   +D+ D   ++ G  S   T+  F G      P    PPPP
Sbjct: 1833 --LPVTMVSRLPVSKDEPDTLTLRSGPPSPPSTATSFGGPRPRRQP----PPPP 1880



 Score = 33.1 bits (74), Expect = 0.62
 Identities = 52/197 (26%), Positives = 80/197 (40%), Gaps = 15/197 (7%)

Query: 50   SAALSPS-EGPSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPF 108
            SA L+ S  GP++ ++     A   P A    S   SG   S S    G ++A   PS  
Sbjct: 1460 SAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASPSASALTLGLATA---PSLS 1516

Query: 109  SSLGSWRPCAFR-WRLRVPR-NLKLFPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVA 166
            SS     P         VP  N  + P  S     +   A P P++P+P+ +  S+   A
Sbjct: 1517 SSQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAPA 1576

Query: 167  KSRSR--------LWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVA 218
             S S+        +     +  APS +P L+ +P  +     +P   SS+ T   V A +
Sbjct: 1577 SSASQALATPLAPMAAPQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQ-TPVPVMAPS 1635

Query: 219  CSTGASPATWRSSVAPS 235
             + G S A+     AP+
Sbjct: 1636 STPGTSLASASPVPAPT 1652


>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
          Length = 1192

 Score = 38.5 bits (88), Expect = 0.015
 Identities = 47/174 (27%), Positives = 63/174 (36%), Gaps = 31/174 (17%)

Query: 72  PAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRPCAFRWRLRVPRNLKL 131
           P P + S  +AG +G   S +G             P S  G+  P   R      R   L
Sbjct: 29  PPPPSPSAAAAGAAGARGSETG------------DPGSPRGAEEPGKKRHERLFHRQDAL 76

Query: 132 FPQVSQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLD---------ASSSAP 182
           +   S A     E  PPA  SP+P++  + +S     R  LW +          +    P
Sbjct: 77  WISTSSAGTGGAE--PPA-LSPAPASPARPVSPAPGRRLSLWAVPPGPPLSGGLSPDPKP 133

Query: 183 SASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATW--RSSVAP 234
             +P  S  P  SS SW  P P      G A   +  S+   P T   R  VAP
Sbjct: 134 GGAPTSSRRPLLSSPSWGGPEP-----EGRAGGGIPGSSSPHPGTGSRRLKVAP 182



 Score = 29.6 bits (65), Expect = 6.9
 Identities = 63/231 (27%), Positives = 84/231 (36%), Gaps = 50/231 (21%)

Query: 56  SEG-PSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAV---LAPS----- 106
           SEG P V  +  SAG   +  A +T +A   GG ++ +  G G  +     L+P      
Sbjct: 215 SEGKPRVKGSKSSAGTGASVSAAATAAAAGGGGSTASTSGGVGAGAGARGKLSPRKGKSK 274

Query: 107 --PFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQA-SFCSCEAAPPAPASP----SPSASL 159
               S L    P         P  L L P  S A +  +  A PP PA P     P+  L
Sbjct: 275 TLDNSDLHPGPPAG------SPPPLTLPPTPSPATAVTAASAQPPGPAPPITLEPPAPGL 328

Query: 160 KSMSLVAKSRSR--------LWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTG 211
           K      ++ +R          +   S+  P  S  L   P  SSGS        SR   
Sbjct: 329 KRGREGGRASTRDRKMLKFISGIFTKSTGGPPGSGPLPGPPSLSSGS-------GSR--- 378

Query: 212 EAVSAVACSTGASPATWRSSVAPSDGCSLSR---EEDQDDPGDVKKGKSSL 259
                +     ASP     +V  S   +LSR   E      GD + GKSSL
Sbjct: 379 ---ELLGAELRASP----KAVINSQEWTLSRSIPELRLGVLGDARSGKSSL 422


>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
            sapiens]
          Length = 2881

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 21/145 (14%)

Query: 126  PRNLKLFPQVS--QASFCSCE------AAPPAPASPSPSASLKSMSLVAKSRSRLWLLDA 177
            P+N  + PQ +  Q S   CE      AA   P +P+P          A  + R+    +
Sbjct: 2080 PKN-GVLPQATGDQKSGGKCETDRRMVAARTEPLTPNP----------ASKKPRVHKRGS 2128

Query: 178  SSSAPSASPVLSSVPCSSSGSWLSPRPCS-SRCTGEAVSAVACSTGASPATWRSSVAPSD 236
             SS+ S S    S   S S S  S   CS SR    + S+ +CS+ +S ++  +S + S 
Sbjct: 2129 ESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSS 2188

Query: 237  GCSLSREEDQDDPGDVKKGKSSLHI 261
              S S E D D+  + +K +S+ H+
Sbjct: 2189 SSSSSEESDSDEE-EAQKRESTTHM 2212


>gi|95091988 Rho GTPase activating protein 6 isoform 3 [Homo
           sapiens]
          Length = 765

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 50/177 (28%), Positives = 70/177 (39%), Gaps = 18/177 (10%)

Query: 39  LSSSLFSEDLFSAALSPSEGPSVSSAGFSAGA-SPAPGADSTTSAGVSGGFSSCSGAGWG 97
           +S+      +FS + SP+   + S+ GFS          D     G     +   G+  G
Sbjct: 1   MSAQSLLHSVFSCS-SPASSSAASAKGFSKRKLRQTRSLDPALIGGCGSDEAGAEGSARG 59

Query: 98  PSSAVL-APS-PFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSP 155
            ++  L +PS P  SLG     A   R   PR  +L P       CS  + P  P   SP
Sbjct: 60  ATAGRLYSPSLPAESLGP--RLASSSRGPPPRATRLPPP---GPLCSSFSTPSTPQEKSP 114

Query: 156 SASLKSMSLVAKSRSRL-----WLLDASSSAPSASPVLSSVPCSSSGS----WLSPR 203
           S S      V   R  L     W L +  + P++S   SS+ CSS G     + SPR
Sbjct: 115 SGSFHFDYEVPLGRGGLKKSMAWDLPSVLAGPASSRSASSILCSSGGGPNGIFASPR 171


>gi|95091875 Rho GTPase activating protein 6 isoform 1 [Homo
           sapiens]
          Length = 974

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 50/177 (28%), Positives = 70/177 (39%), Gaps = 18/177 (10%)

Query: 39  LSSSLFSEDLFSAALSPSEGPSVSSAGFSAGA-SPAPGADSTTSAGVSGGFSSCSGAGWG 97
           +S+      +FS + SP+   + S+ GFS          D     G     +   G+  G
Sbjct: 1   MSAQSLLHSVFSCS-SPASSSAASAKGFSKRKLRQTRSLDPALIGGCGSDEAGAEGSARG 59

Query: 98  PSSAVL-APS-PFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSP 155
            ++  L +PS P  SLG     A   R   PR  +L P       CS  + P  P   SP
Sbjct: 60  ATAGRLYSPSLPAESLGP--RLASSSRGPPPRATRLPPP---GPLCSSFSTPSTPQEKSP 114

Query: 156 SASLKSMSLVAKSRSRL-----WLLDASSSAPSASPVLSSVPCSSSGS----WLSPR 203
           S S      V   R  L     W L +  + P++S   SS+ CSS G     + SPR
Sbjct: 115 SGSFHFDYEVPLGRGGLKKSMAWDLPSVLAGPASSRSASSILCSSGGGPNGIFASPR 171


>gi|60593036 keratin associated protein 5-3 [Homo sapiens]
          Length = 238

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 49/179 (27%), Positives = 62/179 (34%), Gaps = 15/179 (8%)

Query: 60  SVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSL-----GSW 114
           S SS G   G+    G+      G  GG  SC G+  G  S+   P   SS      GS 
Sbjct: 53  SCSSCGSCGGSKGVCGS----CGGCKGGCGSCGGSKGGCGSSCCVPVCCSSSCGSCGGSK 108

Query: 115 RPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPS----PSASLKSMSLVAKSRS 170
             C FR   +         Q S    C C +   +    S    PS S  S      S+S
Sbjct: 109 GVCGFRGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQSSCCKPSCSQSSCCKPCCSQS 168

Query: 171 RLWLLDASSSAPSASPVLSSV--PCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPAT 227
                   SS   +S   SS   PC S  S   P  CSS C      +  C   +S ++
Sbjct: 169 SCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCSSQSS 227


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 72/282 (25%), Positives = 96/282 (34%), Gaps = 40/282 (14%)

Query: 42   SLFSEDLFSAALSPSEGPSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSA 101
            S FS+   S  L     P   S   S+GA     A +T+SAG   G  S    G  P S 
Sbjct: 2453 SAFSDQ--SRCLIAQTTPVAGSQSLSSGAV----ATTTSSAGDHNGMLSVPAPGV-PHSD 2505

Query: 102  VLAPSPFSSLGSWRPCAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPAPASPSPSASLKS 161
            V  P   +S G+ +P A            L P   + S  S  ++  + +S S S+S  S
Sbjct: 2506 VGEPP--ASTGAQQPSALA---------ALQPAKERRSSSSSSSSSSSSSSSSSSSSSSS 2554

Query: 162  MSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEA-------V 214
             S  + S S     + SS        L  VP        SP P       E         
Sbjct: 2555 SSGSSSSDS-----EGSSLPVQPEVALKRVP--------SPTPAPKEAVREGRPPEPTPA 2601

Query: 215  SAVACSTGASPATWRSSVAPSDGCSLSREEDQDDPGDVKKGKSSLHITSGVFPGLAVPLN 274
                 S+ +S ++  SS + S   S S               SS    S   PG      
Sbjct: 2602 KRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPK 2661

Query: 275  PWLPLPPPPGRNGLNLLVSVVASI--FSMLANSPLESRFTPP 314
            P  P  PPPG          + S+     L+ SP+E R   P
Sbjct: 2662 PASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSP 2703


>gi|208022661 hypothetical protein LOC57701 [Homo sapiens]
          Length = 1334

 Score = 37.4 bits (85), Expect = 0.033
 Identities = 47/170 (27%), Positives = 61/170 (35%), Gaps = 36/170 (21%)

Query: 63  SAGFSAGASPAPGADSTT---------SAGV-----SGGFSSCSGAGWGPSSAVLAPSPF 108
           +AG   G  P PG  S+          S G+      GG       G+G +S    P PF
Sbjct: 346 AAGPLNGDHPGPGQSSSPDQAPPQLSKSKGLPKSAWGGGTPEAHRPGFGATSEGQGPLPF 405

Query: 109 SSLGSWRPCAFRWRLRVPRNLKL-FPQVSQASFCSCEAAPPAPAS------PSPSASLKS 161
            S+       F      P   +   P  S       +  PP+P        PSP+  LK 
Sbjct: 406 LSM-------FMGAGDAPLGSRPGHPHSSSQVKSKLQIGPPSPGEAQGPLLPSPARGLKF 458

Query: 162 MSLVAKSRSRLWLLDASSSAPSASPVL---SSVPCSSSGSWLSPRPCSSR 208
           + L   S         S   P  SP L   S +PC +SGS  SP P  +R
Sbjct: 459 LKLPPTSEK-----SPSPGGPQLSPQLPRNSRIPCRNSGSDGSPSPLLAR 503


>gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 375

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 41/188 (21%), Positives = 66/188 (35%), Gaps = 13/188 (6%)

Query: 57  EGPSVSSAGFSAGASPAPGADSTTSAGVSGGFSSCSGAGWGPSSAVLAPSPFSSLGSWRP 116
           +    SS  +S  +S      S  S+G S    SC  +G   + +  +    S+  SW+ 
Sbjct: 193 QSSGTSSTSYSCQSSGTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSWQS 252

Query: 117 CAFRWRLRVPRNLKLFPQVSQASFCSCEAAPPA-----PASPSPSASLKSMSLVAKSRSR 171
                  R           + ++ CSC+++  +      +S + S S    S    S   
Sbjct: 253 S------RTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSSRTSSTCS 306

Query: 172 LWLLDASSSAPSASPVLSSVPCSSSGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSS 231
                 SS++ S     +S  CS   S  S   C   C     S+ +CS   S  +  S 
Sbjct: 307 CQFSRTSSTSCSCQSSRTSSTCSCQSSGTSSTSCI--CWSSGTSSTSCSGRFSGTSSTSC 364

Query: 232 VAPSDGCS 239
              S G S
Sbjct: 365 NCRSSGTS 372



 Score = 35.0 bits (79), Expect = 0.16
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 5/102 (4%)

Query: 138 ASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSSSG 197
           +S CSC+++  +  S +  +S  S +   +S        ++S +  +S   S+  C SSG
Sbjct: 164 SSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSSGT----SSTSYSCQSSGTSSTCSCQSSG 219

Query: 198 SWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCS 239
           +  +   C S  T    S  +  T ++  +W+SS   S  CS
Sbjct: 220 TSSTSCSCQSSGTSSTCSCQSSGTSSTSCSWQSS-RTSSTCS 260



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 5/106 (4%)

Query: 136 SQASFCSCEAAPPAPASPSPSASLKSMSLVAKSRSRLWLLDASSSAPSASPVLSSVPCSS 195
           + +S CSC+++  +      S+   S      S +     +  SS  S     S+  C S
Sbjct: 13  ASSSSCSCQSSQTSSTCSCQSSQTSSTCSCQSSGTSSTSCNWQSSRTS-----STCSCQS 67

Query: 196 SGSWLSPRPCSSRCTGEAVSAVACSTGASPATWRSSVAPSDGCSLS 241
           SG+  +   C S  T    S  +  T ++  +W+ S   S  C  S
Sbjct: 68  SGTSSTSCSCQSSETSSTCSCQSSGTSSTSCSWQFSRTSSTCCCQS 113


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,110,031
Number of Sequences: 37866
Number of extensions: 1266452
Number of successful extensions: 9795
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 389
Number of HSP's that attempted gapping in prelim test: 8631
Number of HSP's gapped (non-prelim): 1289
length of query: 513
length of database: 18,247,518
effective HSP length: 107
effective length of query: 406
effective length of database: 14,195,856
effective search space: 5763517536
effective search space used: 5763517536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.