Guide to the Human Genome
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Search of human proteins with 239753591

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239753591 PREDICTED: hypothetical protein [Homo sapiens]
         (194 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753591 PREDICTED: hypothetical protein [Homo sapiens]           415   e-116
gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens]                35   0.040
gi|38569493 potassium voltage-gated channel, subfamily H (eag-re...    35   0.052
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s...    33   0.15 
gi|108773804 Fraser syndrome 1 [Homo sapiens]                          32   0.34 
gi|239754438 PREDICTED: hypothetical protein [Homo sapiens]            31   0.58 
gi|239748928 PREDICTED: hypothetical protein XP_002346859 [Homo ...    31   0.58 
gi|239742950 PREDICTED: hypothetical protein XP_002342702 [Homo ...    31   0.58 
gi|55741473 HECT, C2 and WW domain containing E3 ubiquitin prote...    31   0.58 
gi|116174738 pappalysin 2 isoform 1 [Homo sapiens]                     30   0.99 
gi|209571521 cysteine rich BMP regulator 2 isoform 2 [Homo sapiens]    30   0.99 
gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens]    30   0.99 
gi|221316650 ephrin receptor EphA1 [Homo sapiens]                      30   1.3  
gi|21361639 DIPB protein [Homo sapiens]                                30   1.3  
gi|239756199 PREDICTED: hypothetical protein [Homo sapiens]            30   1.7  
gi|239754935 PREDICTED: hypothetical protein [Homo sapiens]            30   1.7  
gi|239749477 PREDICTED: hypothetical protein XP_002347062 [Homo ...    30   1.7  
gi|239743615 PREDICTED: hypothetical protein XP_002342915 [Homo ...    30   1.7  
gi|16418459 interleukin 22-binding protein isoform 1 [Homo sapiens]    30   1.7  
gi|40068497 FAST kinase domains 3 [Homo sapiens]                       30   1.7  
gi|239757609 PREDICTED: hypothetical protein [Homo sapiens]            29   2.2  
gi|239755871 PREDICTED: hypothetical protein [Homo sapiens]            29   2.2  
gi|239752116 PREDICTED: hypothetical protein XP_002348117 [Homo ...    29   2.2  
gi|239750347 PREDICTED: hypothetical protein XP_002347376 [Homo ...    29   2.2  
gi|239746618 PREDICTED: hypothetical protein XP_002344233 [Homo ...    29   2.2  
gi|239744651 PREDICTED: hypothetical protein XP_002343214 [Homo ...    29   2.2  
gi|13325064 cadherin EGF LAG seven-pass G-type receptor 2 [Homo ...    29   2.9  
gi|117938759 GNAS complex locus XLas [Homo sapiens]                    29   2.9  
gi|169214870 PREDICTED: similar to hCG2041260 [Homo sapiens]           29   2.9  
gi|113429036 PREDICTED: hypothetical protein [Homo sapiens]            29   2.9  

>gi|239753591 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 194

 Score =  415 bits (1067), Expect = e-116
 Identities = 194/194 (100%), Positives = 194/194 (100%)

Query: 1   MNTEASMCQAEGPASAKAPSCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSG 60
           MNTEASMCQAEGPASAKAPSCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSG
Sbjct: 1   MNTEASMCQAEGPASAKAPSCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSG 60

Query: 61  RRGECLSHKAMEAKRGERQWPHPTPGTCWGRSDTSCDGCSLPPARLPSPWREKLCLETGL 120
           RRGECLSHKAMEAKRGERQWPHPTPGTCWGRSDTSCDGCSLPPARLPSPWREKLCLETGL
Sbjct: 61  RRGECLSHKAMEAKRGERQWPHPTPGTCWGRSDTSCDGCSLPPARLPSPWREKLCLETGL 120

Query: 121 CSGPSLFCRSHKVLWGNGVFQMKNVEKNRFTLGTIRKKQFGVSRAAQNLKGHVKFLSVDM 180
           CSGPSLFCRSHKVLWGNGVFQMKNVEKNRFTLGTIRKKQFGVSRAAQNLKGHVKFLSVDM
Sbjct: 121 CSGPSLFCRSHKVLWGNGVFQMKNVEKNRFTLGTIRKKQFGVSRAAQNLKGHVKFLSVDM 180

Query: 181 LAQNFSKYCAQAKQ 194
           LAQNFSKYCAQAKQ
Sbjct: 181 LAQNFSKYCAQAKQ 194


>gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens]
          Length = 1541

 Score = 35.0 bits (79), Expect = 0.040
 Identities = 42/140 (30%), Positives = 47/140 (33%), Gaps = 16/140 (11%)

Query: 2    NTEASMCQAEGPASAKAPSCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQ-SG 60
            +T   +C A          C +     A A R  C P AA    H  G C CP     SG
Sbjct: 1100 HTGRCLCPAGWTGDKCQSPCLRGWFGEACAQRCSCPPGAACH--HVTGACRCPPGFTGSG 1157

Query: 61   RRGECLSHK------AMEAKRGERQWPHPTPGTC---WGRSDTSCDGCSLPPARLPSPWR 111
                C           M    GE    HP  GTC    G    SC     PP R   P  
Sbjct: 1158 CEQACPPGSFGEDCAQMCQCPGENPACHPATGTCSCAAGYHGPSCQQ-RCPPGRY-GPGC 1215

Query: 112  EKL--CLETGLCSGPSLFCR 129
            E+L  CL  G C   +  CR
Sbjct: 1216 EQLCGCLNGGSCDAATGACR 1235


>gi|38569493 potassium voltage-gated channel, subfamily H
            (eag-related), member 3 [Homo sapiens]
          Length = 1083

 Score = 34.7 bits (78), Expect = 0.052
 Identities = 39/131 (29%), Positives = 43/131 (32%), Gaps = 43/131 (32%)

Query: 20   SCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTS-------LQSGRRGECLSHKAME 72
            S RQ+ Q   A  R   CP A+ E     G C   TS       + +G    CL   A  
Sbjct: 901  SLRQAVQLVLAPHREGPCPRASGE-----GPCPASTSGLLQPLCVDTGASSYCLQPPAGS 955

Query: 73   AKRGERQWPHPTPGT-------CWGRSDTSCDGCSLPPARLPSPWREKLCLETG------ 119
               G   WPHP PG         WG           PPA   SPW       T       
Sbjct: 956  VLSGT--WPHPRPGPPPLMAPWPWG-----------PPASQSSPWPRATAFWTSTSDSEP 1002

Query: 120  -----LCSGPS 125
                 LCS PS
Sbjct: 1003 PASGDLCSEPS 1013


>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
           sapiens]
          Length = 1037

 Score = 33.1 bits (74), Expect = 0.15
 Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 13/86 (15%)

Query: 28  GAAATRGHCCPAAASELIHKAGRCFCPTSLQ--SGRRGECLSHKAMEAKRGERQWPHPTP 85
           G   +RG C P  A E +H  GRC  P   Q   G RG+  S +          W     
Sbjct: 93  GFYESRGFCVPLCAQECVH--GRCVAPNQCQCVPGWRGDDCSSECAPG-----MWGPQCD 145

Query: 86  GTCWGRSDTSCDG----CSLPPARLP 107
             C   +++SCD     CS P    P
Sbjct: 146 KPCSCGNNSSCDPKSGVCSCPSGLQP 171



 Score = 31.2 bits (69), Expect = 0.58
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 7/69 (10%)

Query: 53  CPTSLQSGRRGECLSHKAMEAKRGERQWPHPTPGTCWGRSDTSCDGCSLPPARLPSPWRE 112
           C  S Q GR G+    + +  K     + HP+ GTC+  +  +   CS P    P  W E
Sbjct: 606 CQRSCQPGRYGK----RCVPCKCANHSFCHPSNGTCYCLAGWTGPDCSQPCP--PGHWGE 659

Query: 113 KLCLETGLC 121
             C +T  C
Sbjct: 660 N-CAQTCQC 667



 Score = 29.3 bits (64), Expect = 2.2
 Identities = 35/125 (28%), Positives = 46/125 (36%), Gaps = 17/125 (13%)

Query: 17  KAPSCRQSGQAGAAATRGHCCPAAASELIHKA-GRCFC------PTSLQSGRRGECLSHK 69
           + PSC++S Q G    R   C  A     H + G C+C      P   Q    G    + 
Sbjct: 602 RGPSCQRSCQPGRYGKRCVPCKCANHSFCHPSNGTCYCLAGWTGPDCSQPCPPGHWGENC 661

Query: 70  AMEAKRGERQWPHPTPGTC---WGRSDTSC-DGCSLPP--ARLPSPWR----EKLCLETG 119
           A   +       HP  G+C    G +   C +GC L    A    P +    EK   ETG
Sbjct: 662 AQTCQCHHGGTCHPQDGSCICPLGWTGHHCLEGCPLGTFGANCSQPCQCGPGEKCHPETG 721

Query: 120 LCSGP 124
            C  P
Sbjct: 722 ACVCP 726


>gi|108773804 Fraser syndrome 1 [Homo sapiens]
          Length = 4011

 Score = 32.0 bits (71), Expect = 0.34
 Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 26/140 (18%)

Query: 8   CQAEGP------ASAKAPSCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSGR 61
           C +E P      A+ +   C  S  + +  T  HC              C  P +L   R
Sbjct: 589 CMSECPGGYYADATGRCKVCHNSCASCSGPTPSHCTA------------CSPPKAL---R 633

Query: 62  RGECLSH--KAMEAKRGERQWPHPTPGTCWGRSDTSCDGCSLPPARLPSPWREKLCLETG 119
           +G CL    +   +  G  +  H +   C G + + C GC  P   L       + + +G
Sbjct: 634 QGHCLPRCGEGFYSDHGVCKACHSSCLACMGPAPSHCTGCKKPEEGLQVEQLSDVGIPSG 693

Query: 120 LCSGPSLFCRSHKVLWGNGV 139
            C      CR+H  L   G+
Sbjct: 694 ECLAQ---CRAHFYLESTGI 710



 Score = 27.3 bits (59), Expect = 8.4
 Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 6/86 (6%)

Query: 20  SCRQS---GQAGAAATRGHCCPAAASELIHKAGRCF-CPTSLQSGRRGECLSH--KAMEA 73
           SCR+       G  A   H C   A++L +    C  C  +        C+        A
Sbjct: 793 SCREEQFLNLVGYCADCHHLCQHCAADLHNTGSICLRCQNAHYLLLGDHCVPDCPSGYYA 852

Query: 74  KRGERQWPHPTPGTCWGRSDTSCDGC 99
           +RG  +  H +  TC GR   SC  C
Sbjct: 853 ERGACKKCHSSCRTCQGRGPFSCSSC 878


>gi|239754438 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 709

 Score = 31.2 bits (69), Expect = 0.58
 Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 4   EASMCQAEGPASAKAPSCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSGRRG 63
           E   C A   AS K       G     +   HCC A A+ L+ + G     +S   G  G
Sbjct: 370 EECSCLAVVVASGKGSPSASRGSNWGESFSWHCCTATAAALLLQRG----DSSASGGAAG 425

Query: 64  ECLSHKAMEAKRG-ERQWPHPTPGTCW-GRSD 93
             LS  +  A RG  R  P      C+ G+ D
Sbjct: 426 PPLSGSSPSASRGFSRGEPSSLVSVCFRGKED 457


>gi|239748928 PREDICTED: hypothetical protein XP_002346859 [Homo
           sapiens]
          Length = 709

 Score = 31.2 bits (69), Expect = 0.58
 Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 4   EASMCQAEGPASAKAPSCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSGRRG 63
           E   C A   AS K       G     +   HCC A A+ L+ + G     +S   G  G
Sbjct: 370 EECSCLAVVVASGKGSPSASRGSNWGESFSWHCCTATAAALLLQRG----DSSASGGAAG 425

Query: 64  ECLSHKAMEAKRG-ERQWPHPTPGTCW-GRSD 93
             LS  +  A RG  R  P      C+ G+ D
Sbjct: 426 PPLSGSSPSASRGFSRGEPSSLVSVCFRGKED 457


>gi|239742950 PREDICTED: hypothetical protein XP_002342702 [Homo
           sapiens]
          Length = 709

 Score = 31.2 bits (69), Expect = 0.58
 Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 4   EASMCQAEGPASAKAPSCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSGRRG 63
           E   C A   AS K       G     +   HCC A A+ L+ + G     +S   G  G
Sbjct: 370 EECSCLAVVVASGKGSPSASRGSNWGESFSWHCCTATAAALLLQRG----DSSASGGAAG 425

Query: 64  ECLSHKAMEAKRG-ERQWPHPTPGTCW-GRSD 93
             LS  +  A RG  R  P      C+ G+ D
Sbjct: 426 PPLSGSSPSASRGFSRGEPSSLVSVCFRGKED 457


>gi|55741473 HECT, C2 and WW domain containing E3 ubiquitin protein
           ligase 2 [Homo sapiens]
          Length = 1572

 Score = 31.2 bits (69), Expect = 0.58
 Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 3/94 (3%)

Query: 15  SAKAPSCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSGRRGECLSHKAMEAK 74
           S    S R  G++        C  +  ++L     RC   +SL+S R  E  +  + E +
Sbjct: 624 SVSEASTRPEGESDLECADSSCNESVTTQLSSVDTRC---SSLESARFPETPAFSSQEEE 680

Query: 75  RGERQWPHPTPGTCWGRSDTSCDGCSLPPARLPS 108
            G       + G   G  ++ C   SLP  ++PS
Sbjct: 681 DGACAAEPTSSGPAEGSQESVCTAGSLPVVQVPS 714


>gi|116174738 pappalysin 2 isoform 1 [Homo sapiens]
          Length = 1791

 Score = 30.4 bits (67), Expect = 0.99
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)

Query: 96   CDGCSLPPARLP--SPWREKLCLETGLCSGPSLFCR 129
            C    +PPA+L   SPW    CLE GL S P ++C+
Sbjct: 1489 CSISCVPPAKLQGLSPWLT--CLEDGLWSLPEVYCK 1522


>gi|209571521 cysteine rich BMP regulator 2 isoform 2 [Homo sapiens]
          Length = 814

 Score = 30.4 bits (67), Expect = 0.99
 Identities = 27/111 (24%), Positives = 37/111 (33%), Gaps = 13/111 (11%)

Query: 5   ASMCQAEGPASAKAPSCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSGRRGE 64
           A  CQ +G  +     C  +  A   +  G CCP     ++ +    F      S  R  
Sbjct: 505 ACHCQ-DGTVTCSLVDCPPTTCARPQSGPGQCCPRCPDCILEE--EVFVDGESFSHPRDP 561

Query: 65  CLSHKAMEAKRGERQWP-------HPTPGTCWGRSDTSCDGCSLPPARLPS 108
           C   +  E     +  P       HP PGTC       C GC+      PS
Sbjct: 562 CQECRCQEGHAHCQPRPCPRAPCAHPLPGTC---CPNDCSGCAFGGKEYPS 609


>gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens]
          Length = 1503

 Score = 30.4 bits (67), Expect = 0.99
 Identities = 27/111 (24%), Positives = 37/111 (33%), Gaps = 13/111 (11%)

Query: 5   ASMCQAEGPASAKAPSCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSGRRGE 64
           A  CQ +G  +     C  +  A   +  G CCP     ++ +    F      S  R  
Sbjct: 447 ACHCQ-DGTVTCSLVDCPPTTCARPQSGPGQCCPRCPDCILEE--EVFVDGESFSHPRDP 503

Query: 65  CLSHKAMEAKRGERQWP-------HPTPGTCWGRSDTSCDGCSLPPARLPS 108
           C   +  E     +  P       HP PGTC       C GC+      PS
Sbjct: 504 CQECRCQEGHAHCQPRPCPRAPCAHPLPGTC---CPNDCSGCAFGGKEYPS 551



 Score = 28.9 bits (63), Expect = 2.9
 Identities = 27/103 (26%), Positives = 35/103 (33%), Gaps = 25/103 (24%)

Query: 12  GPASAKAPSCRQSGQAGAAATRGHCCPAAASE--LIHKAGR-----------CFCPTSLQ 58
           G    + PSC +     +    G CCP   +E     + G+           C C     
Sbjct: 164 GAVQCQGPSCSELNCLESCTPPGECCPICCTEGGSHWEHGQEWTTPGDPCRICRCLEGHI 223

Query: 59  SGRRGECLSHKAMEAKRGERQWPHPTPGTCWGRSDTSCDGCSL 101
             R+ EC S     A+        P PGTC       CDGC L
Sbjct: 224 QCRQRECASLCPYPAR--------PLPGTCC----PVCDGCFL 254


>gi|221316650 ephrin receptor EphA1 [Homo sapiens]
          Length = 976

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 28/100 (28%), Positives = 34/100 (34%), Gaps = 9/100 (9%)

Query: 29  AAATRGHCCPAAASELIHKAGRCFCPTSLQSGRRGECLSHKAMEAKRGERQWPH----PT 84
           + A R HC P    E +   GRC C    + G  GE        + R +   PH    P 
Sbjct: 242 SGAPRMHCSPDG--EWLVPVGRCHCEPGYEEGGSGEACVACPSGSYRMDMDTPHCLTCPQ 299

Query: 85  PGTCWGRSDTSCDGCSLPPARLPSPWREKLCLETGLCSGP 124
             T      T C  C     R P    +  C  TG  S P
Sbjct: 300 QSTAESEGATICT-CESGHYRAPGEGPQVAC--TGPPSAP 336


>gi|21361639 DIPB protein [Homo sapiens]
          Length = 344

 Score = 30.0 bits (66), Expect = 1.3
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 41 ASELIHKAGRCFCPTSLQSGRRGECLSHKAMEAKRGERQWPHPTPGTCWGRSD 93
          A E+  + G C+C    ++ R+ + LSH   E   G + W  P  G   G+ +
Sbjct: 29 AEEVCRECGFCYCRRHAEAHRQ-KFLSHHLAEYVHGSQAWTPPADGEGAGKEE 80


>gi|239756199 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 182

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 15/31 (48%), Positives = 19/31 (61%)

Query: 54 PTSLQSGRRGECLSHKAMEAKRGERQWPHPT 84
          PT L SGR G  LS +A+ +  G R+ P PT
Sbjct: 8  PTELCSGRVGAGLSCRALSSPAGSRRAPGPT 38


>gi|239754935 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 397

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 25/88 (28%), Positives = 31/88 (35%), Gaps = 7/88 (7%)

Query: 9   QAEGPASAKAPSCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSGRR------ 62
           + EG A+  AP C Q  + G  A R  CC  A        G    P  ++S R       
Sbjct: 268 RGEGAAARAAPPCGQPRELGTLAARPACCHLAPLRPCLSPGGHQTP-GVRSRRHGTQAAL 326

Query: 63  GECLSHKAMEAKRGERQWPHPTPGTCWG 90
           G C    A     GER+         WG
Sbjct: 327 GACRVGSAGRGLLGERRHGRNLTSRTWG 354


>gi|239749477 PREDICTED: hypothetical protein XP_002347062 [Homo
           sapiens]
          Length = 397

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 25/88 (28%), Positives = 31/88 (35%), Gaps = 7/88 (7%)

Query: 9   QAEGPASAKAPSCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSGRR------ 62
           + EG A+  AP C Q  + G  A R  CC  A        G    P  ++S R       
Sbjct: 268 RGEGAAARAAPPCGQPRELGTLAARPACCHLAPLRPCLSPGGHQTP-GVRSRRHGTQAAL 326

Query: 63  GECLSHKAMEAKRGERQWPHPTPGTCWG 90
           G C    A     GER+         WG
Sbjct: 327 GACRVGSAGRGLLGERRHGRNLTSRTWG 354


>gi|239743615 PREDICTED: hypothetical protein XP_002342915 [Homo
           sapiens]
          Length = 397

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 25/88 (28%), Positives = 31/88 (35%), Gaps = 7/88 (7%)

Query: 9   QAEGPASAKAPSCRQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSGRR------ 62
           + EG A+  AP C Q  + G  A R  CC  A        G    P  ++S R       
Sbjct: 268 RGEGAAARAAPPCGQPRELGTLAARPACCHLAPLRPCLSPGGHQTP-GVRSRRHGTQAAL 326

Query: 63  GECLSHKAMEAKRGERQWPHPTPGTCWG 90
           G C    A     GER+         WG
Sbjct: 327 GACRVGSAGRGLLGERRHGRNLTSRTWG 354


>gi|16418459 interleukin 22-binding protein isoform 1 [Homo sapiens]
          Length = 263

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 73  AKRGERQWPHPTPGTCWGRSDTSCD 97
           AK G+RQW +     CWG  + SCD
Sbjct: 97  AKYGQRQWKNKED--CWGTQELSCD 119


>gi|40068497 FAST kinase domains 3 [Homo sapiens]
          Length = 662

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 106 LPSPWREKLCLETGLC-SGPSLFCRSHKVLWGNGVFQMKNVEKNRFTLGTIRKKQFGVSR 164
           LPS   E +     LC  GP  FC + K L G    + ++++   + +  I   + G+ +
Sbjct: 579 LPSTANEDIHKRIALCIDGPKRFCSNSKHLLGKEAIKQRHLQLLGYQVVQIPYHEIGMLK 638

Query: 165 AAQNLKGHVKFLSVDMLAQN 184
           + + L   V++L   + +QN
Sbjct: 639 SRREL---VEYLQRKLFSQN 655


>gi|239757609 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 571

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 35/134 (26%), Positives = 49/134 (36%), Gaps = 35/134 (26%)

Query: 27  AGAAATRGHCCPAAASELIHKAGR-----CFCPTSLQSGRRGECLSHKAMEAKRGERQWP 81
           +G+ + R   CP AA+ L  +  R        P+  Q       +SH    A +  R   
Sbjct: 143 SGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPE 202

Query: 82  HPT------------------PGTCWGRSDTSCDG--------CS---LPPARLPSPWRE 112
            PT                  PG+  G+S + C          CS   +P  ++PSP   
Sbjct: 203 KPTSVHAEEALRPSRLHQAVDPGSR-GQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAH 261

Query: 113 KLCLETGLCSGPSL 126
             CLETG    PSL
Sbjct: 262 ARCLETGGKGAPSL 275


>gi|239755871 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 282

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 8/61 (13%)

Query: 8   CQAEGPA---SAKAPSCRQSG--QAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSGRR 62
           C  +G     S + PSCR S    AGAA       P  AS   H   +C  P +  SG  
Sbjct: 201 CSVQGEKLQRSGRGPSCRSSSSTSAGAATYTVRTVPKLAS---HTGPKCAAPCTWGSGHS 257

Query: 63  G 63
           G
Sbjct: 258 G 258


>gi|239752116 PREDICTED: hypothetical protein XP_002348117 [Homo
           sapiens]
          Length = 571

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 35/134 (26%), Positives = 49/134 (36%), Gaps = 35/134 (26%)

Query: 27  AGAAATRGHCCPAAASELIHKAGR-----CFCPTSLQSGRRGECLSHKAMEAKRGERQWP 81
           +G+ + R   CP AA+ L  +  R        P+  Q       +SH    A +  R   
Sbjct: 143 SGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPE 202

Query: 82  HPT------------------PGTCWGRSDTSCDG--------CS---LPPARLPSPWRE 112
            PT                  PG+  G+S + C          CS   +P  ++PSP   
Sbjct: 203 KPTSVHAEEALRPSRLHQAVDPGSR-GQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAH 261

Query: 113 KLCLETGLCSGPSL 126
             CLETG    PSL
Sbjct: 262 ARCLETGGKGAPSL 275


>gi|239750347 PREDICTED: hypothetical protein XP_002347376 [Homo
           sapiens]
          Length = 282

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 8/61 (13%)

Query: 8   CQAEGPA---SAKAPSCRQSG--QAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSGRR 62
           C  +G     S + PSCR S    AGAA       P  AS   H   +C  P +  SG  
Sbjct: 201 CSVQGEKLQRSGRGPSCRSSSSTSAGAATYTVRTVPKLAS---HTGPKCAAPCTWGSGHS 257

Query: 63  G 63
           G
Sbjct: 258 G 258


>gi|239746618 PREDICTED: hypothetical protein XP_002344233 [Homo
           sapiens]
          Length = 571

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 35/134 (26%), Positives = 49/134 (36%), Gaps = 35/134 (26%)

Query: 27  AGAAATRGHCCPAAASELIHKAGR-----CFCPTSLQSGRRGECLSHKAMEAKRGERQWP 81
           +G+ + R   CP AA+ L  +  R        P+  Q       +SH    A +  R   
Sbjct: 143 SGSFSRRPQACPGAAALLAQRLIRKDPLAALAPSPQQRKEHQFPMSHTLTPAAQPPRGPE 202

Query: 82  HPT------------------PGTCWGRSDTSCDG--------CS---LPPARLPSPWRE 112
            PT                  PG+  G+S + C          CS   +P  ++PSP   
Sbjct: 203 KPTSVHAEEALRPSRLHQAVDPGSR-GQSRSKCAAGLPAASMPCSRGHIPADQIPSPQAH 261

Query: 113 KLCLETGLCSGPSL 126
             CLETG    PSL
Sbjct: 262 ARCLETGGKGAPSL 275


>gi|239744651 PREDICTED: hypothetical protein XP_002343214 [Homo
           sapiens]
          Length = 282

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 8/61 (13%)

Query: 8   CQAEGPA---SAKAPSCRQSG--QAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSGRR 62
           C  +G     S + PSCR S    AGAA       P  AS   H   +C  P +  SG  
Sbjct: 201 CSVQGEKLQRSGRGPSCRSSSSTSAGAATYTVRTVPKLAS---HTGPKCAAPCTWGSGHS 257

Query: 63  G 63
           G
Sbjct: 258 G 258


>gi|13325064 cadherin EGF LAG seven-pass G-type receptor 2 [Homo
           sapiens]
          Length = 2923

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 33/120 (27%), Positives = 44/120 (36%), Gaps = 8/120 (6%)

Query: 22  RQSGQAGAAATRGHCCPAAASELIHKAGRCFCPTSLQSGRRGECLSHKAMEAKRGERQWP 81
           R  G +GA A  G  CP++AS L     RC    +  +G          +     E   P
Sbjct: 43  RGRGSSGACAPMGWLCPSSASNLWLYTSRCRDAGTELTGHLVPHHDGLRVWCPESEAHIP 102

Query: 82  -HPTPGTC-WGRSDTSCDGCSLPPARLPSPWREKLCLETGLCSGPSLFCRSHKVLWGNGV 139
             P P  C W        G   P  +L  P  E  CL+      P L C+S K+    G+
Sbjct: 103 LPPAPEGCPWSCRLLGIGGHLSPQGKLTLP-EEHPCLK-----APRLRCQSCKLAQAPGL 156


>gi|117938759 GNAS complex locus XLas [Homo sapiens]
          Length = 1037

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 2/87 (2%)

Query: 11  EGPASAKAPSCRQSGQAGAAATRGH-CCPAAASELIHKAGRCFCPTSLQSGRRGECLSHK 69
           E PA+  A   R +  A AA   G    PAA++    +  R          RR   L   
Sbjct: 472 EAPAAPAAAETRAAHVAPAAPDAGAPTAPAASATRAAQVRRAASAAPASGARRKIHLRPP 531

Query: 70  AMEAKRGERQWPHPTPGTCW-GRSDTS 95
           + E +  +   P PT  + W G+S++S
Sbjct: 532 SPEIQAADPPTPRPTRASAWRGKSESS 558


>gi|169214870 PREDICTED: similar to hCG2041260 [Homo sapiens]
          Length = 412

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 7/58 (12%)

Query: 30 AATRGHCCPAAASELIHKAG-RCFCPTSLQSGRRGECLSHKAMEAKRGERQWPHPTPG 86
          +A  G CCP      + +   RCFC  +  + RRG      A +  RG  Q  HP  G
Sbjct: 38 SAALGRCCPGRDPMFVARGPPRCFCDQACGAARRG-----TAAQTIRGSAQ-VHPGKG 89


>gi|113429036 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 388

 Score = 28.9 bits (63), Expect = 2.9
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 7/58 (12%)

Query: 30 AATRGHCCPAAASELIHKAG-RCFCPTSLQSGRRGECLSHKAMEAKRGERQWPHPTPG 86
          +A  G CCP      + +   RCFC  +  + RRG      A +  RG  Q  HP  G
Sbjct: 38 SAALGRCCPGRDPMFVARGPPRCFCDQACGAARRG-----TAAQTIRGSAQ-VHPGKG 89


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.131    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,559,914
Number of Sequences: 37866
Number of extensions: 437283
Number of successful extensions: 1457
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1428
Number of HSP's gapped (non-prelim): 62
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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