Guide to the Human Genome
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Search of human proteins with 239752459

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239752459 PREDICTED: hypothetical protein XP_002348282 [Homo
sapiens]
         (344 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239752459 PREDICTED: hypothetical protein XP_002348282 [Homo ...   711   0.0  
gi|239747029 PREDICTED: hypothetical protein XP_002343910 [Homo ...   121   8e-28
gi|169217402 PREDICTED: similar to CYorf16 protein [Homo sapiens]     117   2e-26
gi|169217327 PREDICTED: hypothetical protein [Homo sapiens]           117   2e-26
gi|239752467 PREDICTED: hypothetical protein [Homo sapiens]           112   4e-25
gi|239747010 PREDICTED: hypothetical protein XP_002344242 [Homo ...   112   4e-25
gi|139948460 testis specific protein, Y-linked 1 [Homo sapiens]        83   4e-16
gi|239747008 PREDICTED: hypothetical protein XP_002344239 [Homo ...    83   4e-16
gi|239746996 PREDICTED: similar to Testis-specific Y-encoded pro...    83   4e-16
gi|118026929 testis specific protein, Y-linked 3 [Homo sapiens]        83   4e-16
gi|118918417 testis specific protein, Y-linked 2 [Homo sapiens]        83   4e-16
gi|239747006 PREDICTED: similar to testis specific protein, Y-li...    76   4e-14
gi|239746992 PREDICTED: similar to testis specific protein, Y-li...    76   4e-14
gi|239757958 PREDICTED: similar to hCG1807781 [Homo sapiens]           56   4e-08
gi|239752465 PREDICTED: similar to TSPY-like 2 [Homo sapiens]          56   4e-08
gi|239747012 PREDICTED: similar to hCG1807781 [Homo sapiens]           56   4e-08
gi|169217429 PREDICTED: similar to CYorf16 protein [Homo sapiens]      45   9e-05
gi|239747004 PREDICTED: hypothetical protein XP_002344241 [Homo ...    45   9e-05
gi|239747002 PREDICTED: hypothetical protein XP_002344240 [Homo ...    45   9e-05
gi|239747000 PREDICTED: hypothetical protein XP_002344483 [Homo ...    45   9e-05
gi|239746998 PREDICTED: hypothetical protein XP_002344482 [Homo ...    45   9e-05
gi|239746994 PREDICTED: hypothetical protein XP_002344481 [Homo ...    45   9e-05
gi|169217434 PREDICTED: similar to CYorf16 protein [Homo sapiens]      45   9e-05
gi|239757956 PREDICTED: similar to CYorf16 protein [Homo sapiens]      42   8e-04
gi|239757977 PREDICTED: similar to CYorf16 protein [Homo sapiens]      38   0.012
gi|239752473 PREDICTED: hypothetical protein XP_002348288 [Homo ...    38   0.012
gi|187761324 shootin1 isoform a [Homo sapiens]                         36   0.044
gi|239744532 PREDICTED: hypothetical protein XP_002343185 [Homo ...    34   0.17 
gi|169217823 PREDICTED: similar to IQ motif and SEC7 domain-cont...    34   0.22 
gi|113431383 PREDICTED: hypothetical protein [Homo sapiens]            34   0.22 

>gi|239752459 PREDICTED: hypothetical protein XP_002348282 [Homo
           sapiens]
          Length = 344

 Score =  711 bits (1834), Expect = 0.0
 Identities = 344/344 (100%), Positives = 344/344 (100%)

Query: 1   MEWTVQVMVSGTSKGGTPFKLEVLQERAARVQSSKAPLGEEKVLVVDNVMVVMEVVAKEE 60
           MEWTVQVMVSGTSKGGTPFKLEVLQERAARVQSSKAPLGEEKVLVVDNVMVVMEVVAKEE
Sbjct: 1   MEWTVQVMVSGTSKGGTPFKLEVLQERAARVQSSKAPLGEEKVLVVDNVMVVMEVVAKEE 60

Query: 61  ANVEPQQEDLQAQPGPGPSTPRPATDSLDVLHLERSYMNVPGCRASPASGPEPYPCSCQF 120
           ANVEPQQEDLQAQPGPGPSTPRPATDSLDVLHLERSYMNVPGCRASPASGPEPYPCSCQF
Sbjct: 61  ANVEPQQEDLQAQPGPGPSTPRPATDSLDVLHLERSYMNVPGCRASPASGPEPYPCSCQF 120

Query: 121 GMLHGESQAQPCSYFYAQQFHGVDTCTPQGDQEKERPHTQTAAEPVQHPAQEGLLQLRNT 180
           GMLHGESQAQPCSYFYAQQFHGVDTCTPQGDQEKERPHTQTAAEPVQHPAQEGLLQLRNT
Sbjct: 121 GMLHGESQAQPCSYFYAQQFHGVDTCTPQGDQEKERPHTQTAAEPVQHPAQEGLLQLRNT 180

Query: 181 EQVVASHNNTLPATPCQLLQCQPLVRAGCLGLSPPTTKTTTALMVPYTPERDRGPGREGA 240
           EQVVASHNNTLPATPCQLLQCQPLVRAGCLGLSPPTTKTTTALMVPYTPERDRGPGREGA
Sbjct: 181 EQVVASHNNTLPATPCQLLQCQPLVRAGCLGLSPPTTKTTTALMVPYTPERDRGPGREGA 240

Query: 241 LPHTLRALANLQGVSLHAHPIIWRLLDQRQIVQHTQMLAGITNDDEVLLSYVCDGFAGQA 300
           LPHTLRALANLQGVSLHAHPIIWRLLDQRQIVQHTQMLAGITNDDEVLLSYVCDGFAGQA
Sbjct: 241 LPHTLRALANLQGVSLHAHPIIWRLLDQRQIVQHTQMLAGITNDDEVLLSYVCDGFAGQA 300

Query: 301 KEPESSGGVWCLGQVEYSSYLSFFSWLADHDCPGSGRIAEVSAR 344
           KEPESSGGVWCLGQVEYSSYLSFFSWLADHDCPGSGRIAEVSAR
Sbjct: 301 KEPESSGGVWCLGQVEYSSYLSFFSWLADHDCPGSGRIAEVSAR 344


>gi|239747029 PREDICTED: hypothetical protein XP_002343910 [Homo
           sapiens]
          Length = 228

 Score =  121 bits (304), Expect = 8e-28
 Identities = 60/104 (57%), Positives = 76/104 (73%)

Query: 19  FKLEVLQERAARVQSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEPQQEDLQAQPGPGP 78
           F+LE   E+ A  QS  A L EE VL+V+++M  +EVV +E+ +VE Q+ + +AQPGPGP
Sbjct: 2   FRLEARLEKTAGAQSKDATLEEEVVLMVEDIMAEVEVVVEEKTDVEWQKVNQRAQPGPGP 61

Query: 79  STPRPATDSLDVLHLERSYMNVPGCRASPASGPEPYPCSCQFGM 122
           STP  + D L VLHLE   +N PG RASPASGPEPYPCSC+FGM
Sbjct: 62  STPGQSMDLLQVLHLELGSVNAPGHRASPASGPEPYPCSCRFGM 105



 Score = 38.1 bits (87), Expect = 0.012
 Identities = 15/25 (60%), Positives = 20/25 (80%)

Query: 319 SYLSFFSWLADHDCPGSGRIAEVSA 343
           +YLS FSWLA+HDC G G I+E+ +
Sbjct: 173 AYLSLFSWLAEHDCLGFGGISEMES 197


>gi|169217402 PREDICTED: similar to CYorf16 protein [Homo sapiens]
          Length = 217

 Score =  117 bits (293), Expect = 2e-26
 Identities = 61/84 (72%), Positives = 63/84 (75%), Gaps = 1/84 (1%)

Query: 50  MVVMEVVAKEEANVEPQQEDLQAQPGPGPSTPRPATDSLDVLHLERSYMNVPGCRASPAS 109
           M  MEVVAKEEANVE QQED QAQPG GPS P PATDSLDVLH+E   +N PG   SPAS
Sbjct: 1   MAEMEVVAKEEANVERQQEDQQAQPGLGPSMPPPATDSLDVLHVELGSVNAPGRGTSPAS 60

Query: 110 GPEPYPCSCQFGMLHGESQAQPCS 133
           GPEPYPCSCQFGM  G S   P S
Sbjct: 61  GPEPYPCSCQFGMA-GSSGWAPSS 83



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 8/63 (12%)

Query: 285 DEVLLSYVCDGFAGQAKEPESSGGVWCL---GQV----EYSSYLSFFSWLADHDCPGSGR 337
           +EV +   C G  G  +E  S+   W     GQ     +Y+SYLSFFS LAD DCPGSGR
Sbjct: 129 NEVTIQEYCIGILGY-RESHSTAVQWLWDHEGQASSCRQYTSYLSFFSPLADCDCPGSGR 187

Query: 338 IAE 340
           I E
Sbjct: 188 IPE 190


>gi|169217327 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 217

 Score =  117 bits (293), Expect = 2e-26
 Identities = 61/84 (72%), Positives = 63/84 (75%), Gaps = 1/84 (1%)

Query: 50  MVVMEVVAKEEANVEPQQEDLQAQPGPGPSTPRPATDSLDVLHLERSYMNVPGCRASPAS 109
           M  MEVVAKEEANVE QQED QAQPG GPS P PATDSLDVLH+E   +N PG   SPAS
Sbjct: 1   MAEMEVVAKEEANVERQQEDQQAQPGLGPSMPPPATDSLDVLHVELGSVNAPGRGTSPAS 60

Query: 110 GPEPYPCSCQFGMLHGESQAQPCS 133
           GPEPYPCSCQFGM  G S   P S
Sbjct: 61  GPEPYPCSCQFGMA-GSSGWAPSS 83



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 8/63 (12%)

Query: 285 DEVLLSYVCDGFAGQAKEPESSGGVWCL---GQV----EYSSYLSFFSWLADHDCPGSGR 337
           +EV +   C G  G  +E  S+   W     GQ     +Y+SYLSFFS LAD DCPGSGR
Sbjct: 129 NEVTIQEYCIGILGY-RESHSTAVQWLWDHEGQASSCRQYTSYLSFFSPLADCDCPGSGR 187

Query: 338 IAE 340
           I E
Sbjct: 188 IPE 190


>gi|239752467 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 357

 Score =  112 bits (281), Expect = 4e-25
 Identities = 59/113 (52%), Positives = 77/113 (68%)

Query: 11  GTSKGGTPFKLEVLQERAARVQSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEPQQEDL 70
           G+++  T F+LE + ER A VQS +A L EE VL V+++M  +EVV + E +V  Q+E  
Sbjct: 13  GSTQESTVFRLEAMLERTAGVQSKEAALEEEAVLKVEDIMAEVEVVVEVEPDVGWQKEGQ 72

Query: 71  QAQPGPGPSTPRPATDSLDVLHLERSYMNVPGCRASPASGPEPYPCSCQFGML 123
           +AQPGPGPSTP P+ DSL+VLHLE   +N PG RASP  GPEPY  +   G L
Sbjct: 73  RAQPGPGPSTPGPSMDSLEVLHLEVGSVNAPGHRASPPCGPEPYFAAADSGWL 125



 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 18/28 (64%), Positives = 23/28 (82%)

Query: 316 EYSSYLSFFSWLADHDCPGSGRIAEVSA 343
           +Y+SYLS FS LA+HDC G GRIAE+ +
Sbjct: 258 QYTSYLSLFSCLAEHDCLGFGRIAEMES 285


>gi|239747010 PREDICTED: hypothetical protein XP_002344242 [Homo
           sapiens]
          Length = 357

 Score =  112 bits (281), Expect = 4e-25
 Identities = 59/113 (52%), Positives = 77/113 (68%)

Query: 11  GTSKGGTPFKLEVLQERAARVQSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEPQQEDL 70
           G+++  T F+LE + ER A VQS +A L EE VL V+++M  +EVV + E +V  Q+E  
Sbjct: 13  GSTQESTVFRLEAMLERTAGVQSKEAALEEEAVLKVEDIMAEVEVVVEVEPDVGWQKEGQ 72

Query: 71  QAQPGPGPSTPRPATDSLDVLHLERSYMNVPGCRASPASGPEPYPCSCQFGML 123
           +AQPGPGPSTP P+ DSL+VLHLE   +N PG RASP  GPEPY  +   G L
Sbjct: 73  RAQPGPGPSTPGPSMDSLEVLHLEVGSVNAPGHRASPPCGPEPYFAAADSGWL 125



 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 18/28 (64%), Positives = 23/28 (82%)

Query: 316 EYSSYLSFFSWLADHDCPGSGRIAEVSA 343
           +Y+SYLS FS LA+HDC G GRIAE+ +
Sbjct: 258 QYTSYLSLFSCLAEHDCLGFGRIAEMES 285


>gi|139948460 testis specific protein, Y-linked 1 [Homo sapiens]
          Length = 308

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 3/103 (2%)

Query: 6   QVMVSGTSKGGTPFKLEVLQERAARVQSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEP 65
           Q +V  ++K GT F++E +QE AA V+S +A LGEE VL++D++M  +EVVA+EE  VE 
Sbjct: 27  QALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVER 86

Query: 66  QQEDLQAQ---PGPGPSTPRPATDSLDVLHLERSYMNVPGCRA 105
           ++E  +AQ   PGPGP TP  A + L  + +E   +N    +A
Sbjct: 87  REEAQRAQQAVPGPGPMTPESAPEELLAVQVELEPVNAQARKA 129



 Score = 37.0 bits (84), Expect = 0.026
 Identities = 37/142 (26%), Positives = 54/142 (38%), Gaps = 51/142 (35%)

Query: 242 PHTLRALANLQGVSLHAHPIIWRLLDQRQIVQHTQMLAGITNDDEVLLSYVCDGFAGQAK 301
           PH  R  A +Q V     P  W  +    I  H QM A IT++DE +LSY+     G+ K
Sbjct: 143 PHLDRRGAVIQSV-----PGFWANV----IANHPQMSALITDEDEDMLSYMVSLEVGEEK 193

Query: 302 EP-----------------------------------ESSGGVW-------CLGQVEYSS 319
            P                                    S+   W          +  ++S
Sbjct: 194 HPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNS 253

Query: 320 YLSFFSWLADHDCPGSGRIAEV 341
            L+FF+W +DH+  GS +IAE+
Sbjct: 254 SLNFFNWFSDHNFAGSNKIAEI 275


>gi|239747008 PREDICTED: hypothetical protein XP_002344239 [Homo
           sapiens]
          Length = 308

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 3/103 (2%)

Query: 6   QVMVSGTSKGGTPFKLEVLQERAARVQSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEP 65
           Q +V  ++K GT F++E +QE AA V+S +A LGEE VL++D++M  +EVVA+EE  VE 
Sbjct: 27  QALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVER 86

Query: 66  QQEDLQAQ---PGPGPSTPRPATDSLDVLHLERSYMNVPGCRA 105
           ++E  +AQ   PGPGP TP  A + L  + +E   +N    +A
Sbjct: 87  REEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKA 129



 Score = 33.9 bits (76), Expect = 0.22
 Identities = 36/142 (25%), Positives = 53/142 (37%), Gaps = 51/142 (35%)

Query: 242 PHTLRALANLQGVSLHAHPIIWRLLDQRQIVQHTQMLAGITNDDEVLLSYVCDGFAGQAK 301
           PH  R  A +Q V     P  W  +    I  H QM A IT++DE +LSY+      + K
Sbjct: 143 PHLDRRGAVIQSV-----PGFWANV----IANHPQMSALITDEDEDMLSYMVSLEVEEEK 193

Query: 302 EP-----------------------------------ESSGGVW-------CLGQVEYSS 319
            P                                    S+   W          +  ++S
Sbjct: 194 HPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNS 253

Query: 320 YLSFFSWLADHDCPGSGRIAEV 341
            L+FF+W +DH+  GS +IAE+
Sbjct: 254 SLNFFNWFSDHNFAGSNKIAEI 275


>gi|239746996 PREDICTED: similar to Testis-specific Y-encoded
           protein 1 [Homo sapiens]
          Length = 308

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 3/103 (2%)

Query: 6   QVMVSGTSKGGTPFKLEVLQERAARVQSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEP 65
           Q +V  ++K GT F++E +QE AA V+S +A LGEE VL++D++M  +EVVA+EE  VE 
Sbjct: 27  QALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVER 86

Query: 66  QQEDLQAQ---PGPGPSTPRPATDSLDVLHLERSYMNVPGCRA 105
           ++E  +AQ   PGPGP TP  A + L  + +E   +N    +A
Sbjct: 87  REEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKA 129



 Score = 36.2 bits (82), Expect = 0.044
 Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 51/142 (35%)

Query: 242 PHTLRALANLQGVSLHAHPIIWRLLDQRQIVQHTQMLAGITNDDEVLLSYVCDGFAGQAK 301
           PH  R  A +Q V     P  W  +    I  H QM A IT++DE +LSY+      + K
Sbjct: 143 PHLDRRGAVIQSV-----PGFWANV----IANHPQMSALITDEDEDMLSYMVSLEVEEEK 193

Query: 302 EP-----------------------------------ESSGGVWCLG-QVE------YSS 319
            P                                    S+   W L  +VE      ++S
Sbjct: 194 HPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYLDYEVEAYRRRHHNS 253

Query: 320 YLSFFSWLADHDCPGSGRIAEV 341
            L+FF+W +DH+  GS +IAE+
Sbjct: 254 SLNFFNWFSDHNFAGSNKIAEI 275


>gi|118026929 testis specific protein, Y-linked 3 [Homo sapiens]
          Length = 308

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 3/103 (2%)

Query: 6   QVMVSGTSKGGTPFKLEVLQERAARVQSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEP 65
           Q +V  ++K GT F++E +QE AA V+S +A LGEE VL++D++M  +EVVA+EE  VE 
Sbjct: 27  QALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVER 86

Query: 66  QQEDLQAQ---PGPGPSTPRPATDSLDVLHLERSYMNVPGCRA 105
           ++E  +AQ   PGPGP TP  A + L  + +E   +N    +A
Sbjct: 87  REEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKA 129



 Score = 33.5 bits (75), Expect = 0.28
 Identities = 12/25 (48%), Positives = 20/25 (80%)

Query: 317 YSSYLSFFSWLADHDCPGSGRIAEV 341
           ++S L+FF+W +DH+  GS +IAE+
Sbjct: 251 HNSSLNFFNWFSDHNFAGSNKIAEI 275


>gi|118918417 testis specific protein, Y-linked 2 [Homo sapiens]
          Length = 308

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 3/103 (2%)

Query: 6   QVMVSGTSKGGTPFKLEVLQERAARVQSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEP 65
           Q +V  ++K GT F++E +QE AA V+S +A LGEE VL++D++M  +EVVA+EE  VE 
Sbjct: 27  QALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEEEGLVER 86

Query: 66  QQEDLQAQ---PGPGPSTPRPATDSLDVLHLERSYMNVPGCRA 105
           ++E  +AQ   PGPGP TP  A + L  + +E   +N    +A
Sbjct: 87  REEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKA 129



 Score = 33.5 bits (75), Expect = 0.28
 Identities = 12/25 (48%), Positives = 20/25 (80%)

Query: 317 YSSYLSFFSWLADHDCPGSGRIAEV 341
           ++S L+FF+W +DH+  GS +IAE+
Sbjct: 251 HNSSLNFFNWFSDHNFAGSNKIAEI 275


>gi|239747006 PREDICTED: similar to testis specific protein,
           Y-linked 3 [Homo sapiens]
          Length = 314

 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 9/109 (8%)

Query: 6   QVMVSGTSKGGTPFKLEVLQERAARVQSSKAPLGEEKVLVVDNVM------VVMEVVAKE 59
           Q +V  ++K GT F++E +QE AA V+S +A LGEE VL++D++M        +EVVA+E
Sbjct: 27  QALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEVEVVAEE 86

Query: 60  EANVEPQQEDLQAQ---PGPGPSTPRPATDSLDVLHLERSYMNVPGCRA 105
           E  VE ++E  +AQ   PGPGP TP  A + L  + +E   +N    +A
Sbjct: 87  EGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKA 135



 Score = 33.5 bits (75), Expect = 0.28
 Identities = 12/25 (48%), Positives = 20/25 (80%)

Query: 317 YSSYLSFFSWLADHDCPGSGRIAEV 341
           ++S L+FF+W +DH+  GS +IAE+
Sbjct: 257 HNSSLNFFNWFSDHNFAGSNKIAEI 281


>gi|239746992 PREDICTED: similar to testis specific protein,
           Y-linked 1 [Homo sapiens]
          Length = 314

 Score = 76.3 bits (186), Expect = 4e-14
 Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 9/109 (8%)

Query: 6   QVMVSGTSKGGTPFKLEVLQERAARVQSSKAPLGEEKVLVVDNVM------VVMEVVAKE 59
           Q +V  ++K GT F++E +QE AA V+S +A LGEE VL++D++M        +EVVA+E
Sbjct: 27  QALVCASAKEGTAFRMEAVQEGAAGVESEQAALGEEAVLLLDDIMAEVEVVAEVEVVAEE 86

Query: 60  EANVEPQQEDLQAQ---PGPGPSTPRPATDSLDVLHLERSYMNVPGCRA 105
           E  VE ++E  +AQ   PGPGP TP  A + L  + +E   +N    +A
Sbjct: 87  EGLVERREEAQRAQQAVPGPGPMTPESALEELLAVQVELEPVNAQARKA 135



 Score = 33.9 bits (76), Expect = 0.22
 Identities = 36/142 (25%), Positives = 53/142 (37%), Gaps = 51/142 (35%)

Query: 242 PHTLRALANLQGVSLHAHPIIWRLLDQRQIVQHTQMLAGITNDDEVLLSYVCDGFAGQAK 301
           PH  R  A +Q V     P  W  +    I  H QM A IT++DE +LSY+      + K
Sbjct: 149 PHLDRRGAVIQSV-----PGFWANV----IANHPQMSALITDEDEDMLSYMVSLEVEEEK 199

Query: 302 EP-----------------------------------ESSGGVW-------CLGQVEYSS 319
            P                                    S+   W          +  ++S
Sbjct: 200 HPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEYRASHSTPIEWYPDYEVEAYRRRHHNS 259

Query: 320 YLSFFSWLADHDCPGSGRIAEV 341
            L+FF+W +DH+  GS +IAE+
Sbjct: 260 SLNFFNWFSDHNFAGSNKIAEI 281


>gi|239757958 PREDICTED: similar to hCG1807781 [Homo sapiens]
          Length = 208

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)

Query: 32  QSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEPQQEDLQAQPGPGPSTPRPATDSLDVL 91
           Q  +A L +E VLV+D++M  + V+A+EEA VE +Q+D +AQPGPGP TP  A + L  +
Sbjct: 93  QREEATLKQETVLVLDDIMAEVGVMAEEEALVE-RQKDQRAQPGPGPMTPESALEELLAV 151

Query: 92  HLERSYMNVPGCRA 105
            +    +N    +A
Sbjct: 152 RVGLELVNAQARKA 165


>gi|239752465 PREDICTED: similar to TSPY-like 2 [Homo sapiens]
          Length = 208

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)

Query: 32  QSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEPQQEDLQAQPGPGPSTPRPATDSLDVL 91
           Q  +A L +E VLV+D++M  + V+A+EEA VE +Q+D +AQPGPGP TP  A + L  +
Sbjct: 93  QREEATLKQETVLVLDDIMAEVGVMAEEEALVE-RQKDQRAQPGPGPMTPESALEELLAV 151

Query: 92  HLERSYMNVPGCRA 105
            +    +N    +A
Sbjct: 152 RVGLELVNAQARKA 165


>gi|239747012 PREDICTED: similar to hCG1807781 [Homo sapiens]
          Length = 208

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)

Query: 32  QSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEPQQEDLQAQPGPGPSTPRPATDSLDVL 91
           Q  +A L +E VLV+D++M  + V+A+EEA VE +Q+D +AQPGPGP TP  A + L  +
Sbjct: 93  QREEATLKQETVLVLDDIMAEVGVMAEEEALVE-RQKDQRAQPGPGPMTPESALEELLAV 151

Query: 92  HLERSYMNVPGCRA 105
            +    +N    +A
Sbjct: 152 RVGLELVNAQARKA 165


>gi|169217429 PREDICTED: similar to CYorf16 protein [Homo sapiens]
          Length = 152

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 316 EYSSYLSFFSWLADHDCPGSGRIAEVSA 343
           +Y+SYLS FS LA+HDCPG GRIAE+ +
Sbjct: 96  QYTSYLSSFSCLAEHDCPGFGRIAELES 123


>gi|239747004 PREDICTED: hypothetical protein XP_002344241 [Homo
           sapiens]
          Length = 145

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 316 EYSSYLSFFSWLADHDCPGSGRIAEVSA 343
           +Y+SYLS FS LA+HDCPG GRIAE+ +
Sbjct: 89  QYTSYLSSFSCLAEHDCPGFGRIAELES 116


>gi|239747002 PREDICTED: hypothetical protein XP_002344240 [Homo
           sapiens]
          Length = 145

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 316 EYSSYLSFFSWLADHDCPGSGRIAEVSA 343
           +Y+SYLS FS LA+HDCPG GRIAE+ +
Sbjct: 89  QYTSYLSSFSCLAEHDCPGFGRIAELES 116


>gi|239747000 PREDICTED: hypothetical protein XP_002344483 [Homo
           sapiens]
          Length = 145

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 316 EYSSYLSFFSWLADHDCPGSGRIAEVSA 343
           +Y+SYLS FS LA+HDCPG GRIAE+ +
Sbjct: 89  QYTSYLSSFSCLAEHDCPGFGRIAELES 116


>gi|239746998 PREDICTED: hypothetical protein XP_002344482 [Homo
           sapiens]
          Length = 145

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 316 EYSSYLSFFSWLADHDCPGSGRIAEVSA 343
           +Y+SYLS FS LA+HDCPG GRIAE+ +
Sbjct: 89  QYTSYLSSFSCLAEHDCPGFGRIAELES 116


>gi|239746994 PREDICTED: hypothetical protein XP_002344481 [Homo
           sapiens]
          Length = 145

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 316 EYSSYLSFFSWLADHDCPGSGRIAEVSA 343
           +Y+SYLS FS LA+HDCPG GRIAE+ +
Sbjct: 89  QYTSYLSSFSCLAEHDCPGFGRIAELES 116


>gi|169217434 PREDICTED: similar to CYorf16 protein [Homo sapiens]
          Length = 185

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 19/28 (67%), Positives = 24/28 (85%)

Query: 316 EYSSYLSFFSWLADHDCPGSGRIAEVSA 343
           +Y+SYLS FS LA+HDCPG GRIAE+ +
Sbjct: 129 QYTSYLSSFSCLAEHDCPGFGRIAELES 156


>gi|239757956 PREDICTED: similar to CYorf16 protein [Homo sapiens]
          Length = 223

 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 18/28 (64%), Positives = 23/28 (82%)

Query: 316 EYSSYLSFFSWLADHDCPGSGRIAEVSA 343
           +Y+SYLS FS LA+HDC G GRIAE+ +
Sbjct: 124 QYTSYLSLFSCLAEHDCLGFGRIAEMES 151


>gi|239757977 PREDICTED: similar to CYorf16 protein [Homo sapiens]
          Length = 140

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 15/25 (60%), Positives = 20/25 (80%)

Query: 319 SYLSFFSWLADHDCPGSGRIAEVSA 343
           +YLS FSWLA+HDC G G I+E+ +
Sbjct: 85  AYLSLFSWLAEHDCLGFGGISEMES 109


>gi|239752473 PREDICTED: hypothetical protein XP_002348288 [Homo
           sapiens]
          Length = 140

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 15/25 (60%), Positives = 20/25 (80%)

Query: 319 SYLSFFSWLADHDCPGSGRIAEVSA 343
           +YLS FSWLA+HDC G G I+E+ +
Sbjct: 85  AYLSLFSWLAEHDCLGFGGISEMES 109


>gi|187761324 shootin1 isoform a [Homo sapiens]
          Length = 631

 Score = 36.2 bits (82), Expect = 0.044
 Identities = 27/115 (23%), Positives = 38/115 (33%), Gaps = 21/115 (18%)

Query: 76  PGPSTPRPATDSLDVLHLERSYMNVPGCRASPASGPEPYPCSCQFGMLHGESQAQPCSYF 135
           P P TP P                + GC +S  +   P    C+   + GE QA+P    
Sbjct: 533 PSPPTPEPGEGP----------RKLEGCTSSKVTFQPPSSIGCRKKYIDGEKQAEP---- 578

Query: 136 YAQQFHGVDTCTPQGDQEKERPHTQTAAEPVQHPAQEGLLQLRNTEQVVASHNNT 190
                  V    P    E +        +P QH   EG +Q  N E  + +   T
Sbjct: 579 -------VVVLDPVSTHEPQTKDQVAEKDPTQHKEDEGEIQPENKEDSIENVRET 626


>gi|239744532 PREDICTED: hypothetical protein XP_002343185 [Homo
           sapiens]
          Length = 185

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 12/162 (7%)

Query: 24  LQERAARVQSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEPQQEDLQAQPGPG----PS 79
           L+E  A VQ+ ++ +  ++  + D +   ++ ++ E  ++   Q+ LQAQP PG     S
Sbjct: 15  LKELTAIVQNQQSLIHTQRERI-DELERRLDELSAENRSLWEHQQLLQAQPPPGLVPPSS 73

Query: 80  TPRPATDSLDVLHLERSY--MNVPGCRASPASGPEP-YPCSCQFGMLHGESQAQPCSYFY 136
            P PA  +       R+   +   G R++ A  P P  P     G L  + Q  P S  +
Sbjct: 74  APLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQPQRGPGSRAH 133

Query: 137 AQQ--FHGVDTCTPQGDQEKERPHTQTAAEP--VQHPAQEGL 174
             Q     + T     D+EKERP +  AA    +QH +   L
Sbjct: 134 TPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSAL 175


>gi|169217823 PREDICTED: similar to IQ motif and SEC7
           domain-containing protein 3 [Homo sapiens]
          Length = 185

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 12/162 (7%)

Query: 24  LQERAARVQSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEPQQEDLQAQPGPG----PS 79
           L+E  A VQ  ++ +  ++  + D +   ++ ++ E  ++   Q+ LQAQP PG     S
Sbjct: 15  LKELTAIVQKQQSLIHTQRERI-DELERRLDELSAENRSLWEHQQLLQAQPPPGLVPPSS 73

Query: 80  TPRPATDSLDVLHLERSY--MNVPGCRASPASGPEP-YPCSCQFGMLHGESQAQPCSYFY 136
            P PA  +       R+   +   G R++ A  P P  P     G L  + Q  P S  +
Sbjct: 74  APLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQPQRGPGSRAH 133

Query: 137 AQQ--FHGVDTCTPQGDQEKERPHTQTAAEP--VQHPAQEGL 174
             Q     + T     D+EKERP +  AA    +QH +   L
Sbjct: 134 TPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSAL 175


>gi|113431383 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 185

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 12/162 (7%)

Query: 24  LQERAARVQSSKAPLGEEKVLVVDNVMVVMEVVAKEEANVEPQQEDLQAQPGPG----PS 79
           L+E  A VQ  ++ +  ++  + D +   ++ ++ E  ++   Q+ LQAQP PG     S
Sbjct: 15  LKELTAIVQKQQSLIHTQRERI-DELERRLDELSAENRSLWEHQQLLQAQPPPGLVPPSS 73

Query: 80  TPRPATDSLDVLHLERSY--MNVPGCRASPASGPEP-YPCSCQFGMLHGESQAQPCSYFY 136
            P PA  +       R+   +   G R++ A  P P  P     G L  + Q  P S  +
Sbjct: 74  APLPAAPATAPAAAARAQEPLQDQGQRSAAAPHPAPDRPPRQHHGQLLEQPQRGPGSRAH 133

Query: 137 AQQ--FHGVDTCTPQGDQEKERPHTQTAAEP--VQHPAQEGL 174
             Q     + T     D+EKERP +  AA    +QH +   L
Sbjct: 134 TPQSPHKHLGTQGAVTDKEKERPPSCCAAAGALLQHKSPSAL 175


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,104,919
Number of Sequences: 37866
Number of extensions: 873422
Number of successful extensions: 3459
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 3318
Number of HSP's gapped (non-prelim): 200
length of query: 344
length of database: 18,247,518
effective HSP length: 103
effective length of query: 241
effective length of database: 14,347,320
effective search space: 3457704120
effective search space used: 3457704120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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