Guide to the Human Genome
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Name: GALNT3 Sequence: fasta or formatted (633aa) NCBI GI: 153266878
Description:

polypeptide N-acetylgalactosaminyltransferase 3

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         37           2
 C cysteine            2.4         15           1
 D aspartate           4.4         28           2
 E glutamate           7.4         47           2
 F phenylalanine       4.4         28           3
 G glycine             5.7         36           2
 H histidine           3.3         21           1
 I isoleucine          6.2         39           2
 K lysine              7.6         48           2
 L leucine             9.0         57           2
 M methionine          2.2         14           1
 N asparagine          4.9         31           2
 P proline             5.2         33           2
 Q glutamine           4.6         29           1
 R arginine            4.9         31           2
 S serine              6.2         39           2
 T threonine           3.9         25           2
 V valine              6.2         39           2
 W tryptophan          1.7         11           1
 Y tyrosine            3.9         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   polypeptide N-acetylgalactosaminyltransferase 3 [Ho... 
GALNT6                0.647   polypeptide N-acetylgalactosaminyltransferase 6 [Ho...
GALNT4                0.348   polypeptide N-acetylgalactosaminyltransferase 4 [Hom...
GALNT12               0.318   N-acetylgalactosaminyltransferase 12 
GALNT1                0.305   polypeptide N-acetylgalactosaminyltransferase 1 [Hom...
GALNT13               0.300   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT11               0.261   N-acetylgalactosaminyltransferase 11 
GALNT5                0.257   N-acetylgalactosaminyltransferase 5 
GALNTL2               0.257   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT2                0.251   polypeptide N-acetylgalactosaminyltransferase 2 [Homo...
GALNT14               0.250   N-acetylgalactosaminyltransferase 14 
GALNT10               0.246   GalNAc transferase 10 isoform a 
GALNTL1               0.245   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
GALNTL6               0.239   N-acetylgalactosaminyltransferase-like 6 
GALNT7                0.207   polypeptide N-acetylgalactosaminyltransferase 7 [Ho...
GALNT9                0.200   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNTL5               0.199   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
WBSCR17               0.193   UDP-GalNAc:polypeptide N-acetylgalactosaminyltransfe...
GALNTL4               0.190   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ac...
GALNT8                0.184   polypeptide N-acetylgalactosaminyltransferase 8 [Homo...
GALNT10               0.079   GalNAc transferase 10 isoform b 
GALNT9                0.051   UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-ace...
B4GALNT4              0.008   beta 1,4-N-acetylgalactosaminyltransferase-transfera...
B4GALT4               0.007   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4...
B4GALT4               0.007   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 4 ...
B4GALT3               0.006   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 3 ...
B4GALT5               0.005   UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 5 ...
B4GALT6               0.005   beta-1,4-galactosyltransferase 6 
ABCC2                 0.005   ATP-binding cassette, sub-family C (CFTR/MRP), member...
B4GALNT3              0.004   beta 1,4-N-acetylgalactosaminyltransferase-transfera...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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