Guide to the Human Genome
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Name: A2ML1 Sequence: fasta or formatted (1454aa) NCBI GI: 74271845
Description:

alpha-2-macroglobulin-like 1

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         91           2
 C cysteine            1.7         25           2
 D aspartate           4.5         65           2
 E glutamate           5.6         82           2
 F phenylalanine       4.6         67           2
 G glycine             6.7         97           3
 H histidine           1.6         23           2
 I isoleucine          4.5         65           2
 K lysine              5.4         78           3
 L leucine             9.9        144           3
 M methionine          2.1         31           1
 N asparagine          4.1         60           2
 P proline             5.8         85           3
 Q glutamine           5.6         82           2
 R arginine            3.0         43           1
 S serine              8.4        122           3
 T threonine           6.9        101           2
 V valine              7.8        114           2
 W tryptophan          1.2         17           1
 Y tyrosine            4.3         62           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alpha-2-macroglobulin-like 1 
A2M                   0.360   alpha-2-macroglobulin precursor 
PZP                   0.330   pregnancy-zone protein 
OVOS2                 0.237   PREDICTED: ovostatin 2 
OVOS                  0.228   PREDICTED: ovostatin 
CD109                 0.171   CD109 antigen isoform 1 precursor 
CD109                 0.169   CD109 antigen isoform 2 precursor 
CD109                 0.155   CD109 antigen isoform 3 precursor 
LOC100133592          0.107   PREDICTED: similar to ovostatin-2 
CPAMD8                0.095   C3 and PZP-like, alpha-2-macroglobulin domain conta...
C4B                   0.067   complement component 4B preproprotein 
C3                    0.067   complement component 3 precursor 
LOC100294156          0.066   PREDICTED: similar to C4A protein isoform 1 
C4A                   0.065   complement component 4A preproprotein 
LOC100294156          0.064   PREDICTED: similar to C4A protein isoform 2 
LOC100133511          0.054   PREDICTED: similar to complement component C3, part...
C5                    0.054   complement component 5 preproprotein 
LOC732434             0.036   PREDICTED: similar to Ovostatin homolog 2 
LOC100293534          0.034   PREDICTED: similar to complement component 4B (Chil...
OVOS                  0.033   PREDICTED: ovostatin 
LOC728735             0.029   PREDICTED: similar to Ovostatin homolog 2 
LOC732435             0.020   PREDICTED: similar to Ovostatin homolog 2 
LOC100134413          0.018   PREDICTED: similar to Ovostatin homolog 2 
LOC100292046          0.013   PREDICTED: similar to Complement component 4A (Rodg...
LOC728715             0.013   PREDICTED: similar to hCG38149 
LOC728715             0.013   PREDICTED: hypothetical protein LOC728715 
LOC653879             0.010   PREDICTED: similar to complement component 3 
LOC732435             0.009   PREDICTED: similar to Ovostatin homolog 2 
OVOS2                 0.007   PREDICTED: ovostatin 2 
MICAL3                0.003   microtubule associated monoxygenase, calponin and L...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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