Guide to the Human Genome
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Name: GPAT2 Sequence: fasta or formatted (795aa) NCBI GI: 116812614
Description:

glycerol-3-phosphate acyltransferase 2, mitochondrial

Referenced in:

Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         58           3
 C cysteine            3.1         25           2
 D aspartate           3.6         29           2
 E glutamate           5.0         40           2
 F phenylalanine       4.5         36           2
 G glycine             7.5         60           2
 H histidine           2.0         16           1
 I isoleucine          3.1         25           1
 K lysine              2.8         22           2
 L leucine            17.6        140           4
 M methionine          1.3         10           1
 N asparagine          0.9          7           1
 P proline             6.5         52           2
 Q glutamine           7.3         58           2
 R arginine            6.2         49           2
 S serine              7.5         60           2
 T threonine           3.9         31           1
 V valine              6.5         52           2
 W tryptophan          2.0         16           1
 Y tyrosine            1.1          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycerol-3-phosphate acyltransferase 2, mitochondri... 
LOC653924             0.270   PREDICTED: hypothetical protein LOC653924 
LOC653924             0.235   PREDICTED: hypothetical protein LOC653924 
LOC653924             0.233   PREDICTED: similar to hCG1732629 
GPAM                  0.212   mitochondrial glycerol 3-phosphate acyltransferase ...
GNPAT                 0.016   glyceronephosphate O-acyltransferase 
SLC16A13              0.006   monocarboxylate transporter 13 
PRKRIR                0.005   protein-kinase, interferon-inducible double stranded...
CEP250                0.004   centrosomal protein 2 
BMF                   0.004   Bcl2 modifying factor isoform bmf-2 
LOC100292419          0.004   PREDICTED: hypothetical protein 
LOC100290297          0.004   PREDICTED: hypothetical protein XP_002347742 
LOC100288674          0.004   PREDICTED: hypothetical protein XP_002343540 
POLR3C                0.004   polymerase (RNA) III (DNA directed) polypeptide C (6...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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