DEPDC5 12411

Name: DEPDC5	Sequence: fasta or formatted (1594aa)		NCBI GI: 209862859
Description: DEP domain containing 5 isoform 3		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [559aa] DEP domain containing 5 isoform 2 alt prot [1572aa] DEP domain containing 5 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 99 3 C cysteine 1.8 29 2 D aspartate 5.5 87 2 E glutamate 6.3 100 3 F phenylalanine 5.0 80 2 G glycine 5.7 91 2 H histidine 2.8 45 2 I isoleucine 3.8 60 2 K lysine 4.6 73 2 L leucine 8.2 131 3 M methionine 2.9 46 2 N asparagine 3.5 55 2 P proline 5.3 85 3 Q glutamine 5.0 80 2 R arginine 6.1 97 4 S serine 9.8 156 3 T threonine 6.1 97 2 V valine 6.3 101 3 W tryptophan 1.6 25 1 Y tyrosine 3.6 57 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DEP domain containing 5 isoform 3 DEPDC5 0.982 DEP domain containing 5 isoform 1 DEPDC5 0.340 DEP domain containing 5 isoform 2 DEPDC6 0.006 DEP domain containing 6 DVL3 0.005 dishevelled 3 DVL2 0.005 dishevelled 2 DVL1 0.004 dishevelled 1 SMTN 0.003 smoothelin isoform b SMTN 0.003 smoothelin isoform c RAPGEF4 0.003 Rap guanine nucleotide exchange factor (GEF) 4 isof... RAPGEF4 0.003 Rap guanine nucleotide exchange factor (GEF) 4 isof... PIKFYVE 0.003 phosphatidylinositol-3-phosphate 5-kinase type III ... PIKFYVE 0.003 phosphatidylinositol-3-phosphate 5-kinase type III i... STIM2 0.003 stromal interaction molecule 2 SMTN 0.003 smoothelin isoform a CAMKV 0.003 CaM kinase-like vesicle-associated MED1 0.003 mediator complex subunit 1 TNRC18 0.003 trinucleotide repeat containing 18 GJA10 0.002 gap junction protein, alpha 10 NCSTN 0.002 nicastrin precursor MUC21 0.002 mucin 21 SRRM2 0.002 splicing coactivator subunit SRm300 LOC100292681 0.002 PREDICTED: hypothetical protein LOC100289011 0.002 PREDICTED: hypothetical protein XP_002343210 UPF1 0.002 regulator of nonsense transcripts 1 FAM65A 0.002 hypothetical protein LOC79567 MAPKBP1 0.002 mitogen-activated protein kinase binding protein 1 ... MAPKBP1 0.002 mitogen-activated protein kinase binding protein 1 ... NKTR 0.002 natural killer-tumor recognition sequence HSPB7 0.002 cardiovascular heat shock protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.