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Search of human proteins with 239752237
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752237 PREDICTED: hypothetical protein XP_002348168 [Homo
sapiens]
(217 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752237 PREDICTED: hypothetical protein XP_002348168 [Homo ... 452 e-128
gi|239746757 PREDICTED: hypothetical protein XP_002343835 [Homo ... 413 e-116
gi|239757743 PREDICTED: hypothetical protein [Homo sapiens] 321 3e-88
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 39 0.003
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 37 0.013
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 37 0.013
gi|239745104 PREDICTED: hypothetical protein XP_002343360 [Homo ... 37 0.017
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 35 0.038
gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo ... 34 0.084
gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo ... 34 0.084
gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo ... 34 0.084
gi|21704281 junctophilin 2 isoform 1 [Homo sapiens] 34 0.084
gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo ... 34 0.11
gi|45593136 LISCH protein isoform 3 [Homo sapiens] 33 0.19
gi|45545424 LISCH protein isoform 2 [Homo sapiens] 33 0.19
gi|45505163 LISCH protein isoform 1 [Homo sapiens] 33 0.19
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 33 0.24
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 33 0.24
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 33 0.24
gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 33 0.24
gi|239753692 PREDICTED: hypothetical protein XP_002345754 [Homo ... 32 0.32
gi|239742345 PREDICTED: hypothetical protein [Homo sapiens] 32 0.32
gi|51896035 G protein-coupled receptor kinase 6 isoform B [Homo ... 32 0.32
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 32 0.32
gi|239758117 PREDICTED: hypothetical protein [Homo sapiens] 32 0.41
gi|169165712 PREDICTED: hypothetical protein [Homo sapiens] 32 0.41
gi|239753682 PREDICTED: hypothetical protein XP_002345751 [Homo ... 32 0.41
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 32 0.41
gi|239748296 PREDICTED: hypothetical protein [Homo sapiens] 32 0.41
gi|88971283 PREDICTED: hypothetical protein [Homo sapiens] 32 0.41
>gi|239752237 PREDICTED: hypothetical protein XP_002348168 [Homo
sapiens]
Length = 217
Score = 452 bits (1164), Expect = e-128
Identities = 217/217 (100%), Positives = 217/217 (100%)
Query: 1 MGTRPWSQPPSQGVAGGKQPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRPVRRA 60
MGTRPWSQPPSQGVAGGKQPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRPVRRA
Sbjct: 1 MGTRPWSQPPSQGVAGGKQPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRPVRRA 60
Query: 61 ALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGN 120
ALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGN
Sbjct: 61 ALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGN 120
Query: 121 GQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRG 180
GQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRG
Sbjct: 121 GQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRG 180
Query: 181 RKSLGADQRSRAGGKALEGAQEEPVPGCGRFRLGPAP 217
RKSLGADQRSRAGGKALEGAQEEPVPGCGRFRLGPAP
Sbjct: 181 RKSLGADQRSRAGGKALEGAQEEPVPGCGRFRLGPAP 217
>gi|239746757 PREDICTED: hypothetical protein XP_002343835 [Homo
sapiens]
Length = 281
Score = 413 bits (1062), Expect = e-116
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 19 QPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRPVRRAALRDKGCAQRHRHVEVCE 78
QPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRPVRRAALRDKGCAQRHRHVEVCE
Sbjct: 83 QPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRPVRRAALRDKGCAQRHRHVEVCE 142
Query: 79 PQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASSQGQEEGPRCPHGH 138
PQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASSQGQEEGPRCPHGH
Sbjct: 143 PQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASSQGQEEGPRCPHGH 202
Query: 139 GTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLGADQRSRAGGKALE 198
GTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLGADQRSRAGGKALE
Sbjct: 203 GTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLGADQRSRAGGKALE 262
Query: 199 GAQEEPVPGCGRFRLGPAP 217
GAQEEPVPGCGRFRLGPAP
Sbjct: 263 GAQEEPVPGCGRFRLGPAP 281
>gi|239757743 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 321 bits (822), Expect = 3e-88
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 66 GCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASS 125
GCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASS
Sbjct: 84 GCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASS 143
Query: 126 QGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLG 185
QGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLG
Sbjct: 144 QGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLG 203
Query: 186 ADQRSRAGGKALEGAQEEPVPGCGRFRLGPAP 217
ADQRSRAGGKALEGAQEEPVPGCGRFRLGPAP
Sbjct: 204 ADQRSRAGGKALEGAQEEPVPGCGRFRLGPAP 235
>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 1006
Score = 38.9 bits (89), Expect = 0.003
Identities = 63/237 (26%), Positives = 83/237 (35%), Gaps = 41/237 (17%)
Query: 11 SQGVAGGKQPRAARTSATVTSSRG-RPPRELGTRTPG-----YMPIRTGSRPVRRAALRD 64
SQ A + PR SR PP R G ++ + T R A R
Sbjct: 60 SQFAARSEPPRCEGVFTRNRCSRAPHPPGPCRCRVGGRQQALWLLLETLEDQATRTAGRA 119
Query: 65 KGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNG--- 121
AQRH ++ + + V +G+ RA +AA ++ GK R G
Sbjct: 120 SALAQRHVGLKPGPQRLRQPSCVHLGAARASHRLAAGGHAVKIGGKKGRKEARGTQGWWP 179
Query: 122 --QASSQGQEEG---------PRCPHGHGTEGSYRETAG--WD--GTPPGPGHLQILERR 166
+ G+E PR H + SY E G W PP P R
Sbjct: 180 PQSLTCDGRERTSAPLRRDLPPRLAH----DASYPEVKGSLWQILTRPPPP-------RP 228
Query: 167 SDPPRLAVRAQGRGRKSLGADQRSRA-----GGKALEGAQEEPVPGCG-RFRLGPAP 217
S P L R QGR R ++G D R G + A + GC RFR P P
Sbjct: 229 SPAPGLTGRGQGRARGAVGLDCGCRPRPCSFGQPDVGSAPSRSLRGCSLRFRNTPPP 285
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 37.0 bits (84), Expect = 0.013
Identities = 52/180 (28%), Positives = 67/180 (37%), Gaps = 52/180 (28%)
Query: 56 PVRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEV--VGKDQH 113
P A +G A RH HV V PQ + AG P+ A + ++ V VG H
Sbjct: 647 PAAAAPTAREGRAGRHGHVAVVCPQVA-----------AGAPVGADLDVSVVLWVGVVGH 695
Query: 114 DVGR---TGNGQASSQGQEEGPR----CPHGHGTEGSYRETAGWDGTPPGP---GHLQIL 163
+GR G +A+ +E GP G G G +R GW G GP +Q+L
Sbjct: 696 -LGRGRGAGRAEAARAAREGGPHQGVFIQRGRGGLG-HRPLPGWRGQGVGPLAQPSVQVL 753
Query: 164 ERRSDPPRL----------------------AVRAQGRGRKSLGADQRSRAGGKALEGAQ 201
R P + AV +GR R LG R A EGAQ
Sbjct: 754 GRVPRDPAVGAATVAQGPVHGHVPVELTAAAAVSGRGRLRDGLG-----RVASVAAEGAQ 808
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 37.0 bits (84), Expect = 0.013
Identities = 52/180 (28%), Positives = 67/180 (37%), Gaps = 52/180 (28%)
Query: 56 PVRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEV--VGKDQH 113
P A +G A RH HV V PQ + AG P+ A + ++ V VG H
Sbjct: 647 PAAAAPTAREGRAGRHGHVAVVCPQVA-----------AGAPVGADLDVSVVLWVGVVGH 695
Query: 114 DVGR---TGNGQASSQGQEEGPR----CPHGHGTEGSYRETAGWDGTPPGP---GHLQIL 163
+GR G +A+ +E GP G G G +R GW G GP +Q+L
Sbjct: 696 -LGRGRGAGRAEAARAAREGGPHQGVFIQRGRGGLG-HRPLPGWRGQGVGPLAQPSVQVL 753
Query: 164 ERRSDPPRL----------------------AVRAQGRGRKSLGADQRSRAGGKALEGAQ 201
R P + AV +GR R LG R A EGAQ
Sbjct: 754 GRVPRDPAVGAATVAQGPVHGHVPVELTAAAAVSGRGRLRDGLG-----RVASVAAEGAQ 808
>gi|239745104 PREDICTED: hypothetical protein XP_002343360 [Homo
sapiens]
Length = 152
Score = 36.6 bits (83), Expect = 0.017
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 137 GHGTEGSYRET-AGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLGADQ-RSRAGG 194
G G EG R AG + PGP E R DP RL + GR+ GA Q + +GG
Sbjct: 31 GRGGEGDARTCGAGRERGLPGPA--LDTEPRWDPRRLCEALRAPGRRLEGAGQPPATSGG 88
Query: 195 KALEGAQEEP---VPGCG 209
A G +EP + GCG
Sbjct: 89 PATSGRSKEPWGHISGCG 106
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 35.4 bits (80), Expect = 0.038
Identities = 45/174 (25%), Positives = 59/174 (33%), Gaps = 29/174 (16%)
Query: 10 PSQGVAGGKQ--PRAARTSATVT--------SSRGRPPRELGTRTPGYMPIRTGSRPVRR 59
P++GV G Q P R S T T S RG PP E G PI+ P +
Sbjct: 902 PARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPPPTKV 961
Query: 60 AALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTG 119
L K Q + +P P + ++G + P P + + D
Sbjct: 962 EELPPKPLEQGDETPKPPKPDPLKITKGKLGGPKETPPNGNLSPAPRL----RRDYSYER 1017
Query: 120 NGQASSQGQEEGPRCPHGHGTEG---------------SYRETAGWDGTPPGPG 158
G S +G+ G G G G SYRE G DG G G
Sbjct: 1018 VGPTSCRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTG 1071
>gi|239755981 PREDICTED: hypothetical protein XP_002344766 [Homo
sapiens]
Length = 307
Score = 34.3 bits (77), Expect = 0.084
Identities = 39/144 (27%), Positives = 50/144 (34%), Gaps = 24/144 (16%)
Query: 3 TRPWSQPP-----SQGVAGGKQPRAARTSATVTSSRGRPPREL--GTRTPGYMPIRTGSR 55
T P +QPP ++G GKQ R A R PP E+ G R P P+ GSR
Sbjct: 56 TFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLR--PPWEVRGGARGPCSAPV--GSR 111
Query: 56 PVRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDV 115
L A+ R C+P+ +G P QV +
Sbjct: 112 ASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRL----------- 160
Query: 116 GRTGNGQASSQGQEEGPRCPHGHG 139
G G S +G R GHG
Sbjct: 161 --LGPGGRPSSPARDGSRRKAGHG 182
>gi|239750506 PREDICTED: hypothetical protein XP_002347417 [Homo
sapiens]
Length = 325
Score = 34.3 bits (77), Expect = 0.084
Identities = 39/144 (27%), Positives = 50/144 (34%), Gaps = 24/144 (16%)
Query: 3 TRPWSQPP-----SQGVAGGKQPRAARTSATVTSSRGRPPREL--GTRTPGYMPIRTGSR 55
T P +QPP ++G GKQ R A R PP E+ G R P P+ GSR
Sbjct: 74 TFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLR--PPWEVRGGARGPCSAPV--GSR 129
Query: 56 PVRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDV 115
L A+ R C+P+ +G P QV +
Sbjct: 130 ASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRL----------- 178
Query: 116 GRTGNGQASSQGQEEGPRCPHGHG 139
G G S +G R GHG
Sbjct: 179 --LGPGGRPSSPARDGSRRKAGHG 200
>gi|239744803 PREDICTED: hypothetical protein XP_002343287 [Homo
sapiens]
Length = 325
Score = 34.3 bits (77), Expect = 0.084
Identities = 39/144 (27%), Positives = 50/144 (34%), Gaps = 24/144 (16%)
Query: 3 TRPWSQPP-----SQGVAGGKQPRAARTSATVTSSRGRPPREL--GTRTPGYMPIRTGSR 55
T P +QPP ++G GKQ R A R PP E+ G R P P+ GSR
Sbjct: 74 TFPGTQPPRALRLAEGSGEGKQEEGRRAQARPRPLR--PPWEVRGGARGPCSAPV--GSR 129
Query: 56 PVRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDV 115
L A+ R C+P+ +G P QV +
Sbjct: 130 ASSGPGLPSAAAARPARKTLTCQPRSIESPATASSAGCGSGPRVPQVRL----------- 178
Query: 116 GRTGNGQASSQGQEEGPRCPHGHG 139
G G S +G R GHG
Sbjct: 179 --LGPGGRPSSPARDGSRRKAGHG 200
>gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]
Length = 696
Score = 34.3 bits (77), Expect = 0.084
Identities = 32/132 (24%), Positives = 46/132 (34%), Gaps = 18/132 (13%)
Query: 75 EVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASSQGQEEGPRC 134
E+ E S + G+G AG+P P E + + R G S G P+
Sbjct: 441 EILENSESLLEPPDRGAGAAGLP----QPPRESPQLHERETPRPEGGSPSPAGTPPQPKR 496
Query: 135 PHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLGADQRSRAGG 194
P ++ W+G P G G R ++G GR+S R
Sbjct: 497 PRPGVSKDGLLSPGAWNGEPSGEG-----------SRSVTPSEGAGRRSPARPATER--- 542
Query: 195 KALEGAQEEPVP 206
A+E Q P P
Sbjct: 543 MAIEALQAPPAP 554
>gi|239758151 PREDICTED: hypothetical protein XP_002346314 [Homo
sapiens]
Length = 321
Score = 33.9 bits (76), Expect = 0.11
Identities = 52/197 (26%), Positives = 77/197 (39%), Gaps = 22/197 (11%)
Query: 7 SQPPSQGVAGGKQPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRPVRRAALRDKG 66
S+P ++G GGK+PR + +AT G R G R+ G IR R + AA K
Sbjct: 140 SRPQTRG-GGGKKPRRGQKAATA----GAKSRGGGVRSRGGKKIR--RRGQKAAAAGAKS 192
Query: 67 CAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASSQ 126
C + + +RR+ + R AA E GK G G + +
Sbjct: 193 CGGGGKKPQKARAVGARRRGWKKLRRRGKKAAAAG---GEKAGKKLRQQGEKGRKKPRRR 249
Query: 127 GQEE----GPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRK 182
GQ+ G RC + ++ A P ++L Q RG+K
Sbjct: 250 GQKAAAAGGERC-----KKPRRQKAAAVSAKSPKKPRRRVLNSARLGAESRKNPQRRGQK 304
Query: 183 SLGADQRSRAG-GKALE 198
S+ A +SR G GK +E
Sbjct: 305 SMAA--KSRVGSGKIVE 319
>gi|45593136 LISCH protein isoform 3 [Homo sapiens]
Length = 581
Score = 33.1 bits (74), Expect = 0.19
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 11/63 (17%)
Query: 4 RPWSQPPSQGVAGG----KQPRAARTSA-------TVTSSRGRPPRELGTRTPGYMPIRT 52
R W Q P++ AGG ++PRA A + S R P G R+ YMP R+
Sbjct: 401 RGWDQEPAREQAGGGWRARRPRARSVDALDDLTPPSTAESGSRSPTSNGGRSRAYMPPRS 460
Query: 53 GSR 55
SR
Sbjct: 461 RSR 463
>gi|45545424 LISCH protein isoform 2 [Homo sapiens]
Length = 649
Score = 33.1 bits (74), Expect = 0.19
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 11/63 (17%)
Query: 4 RPWSQPPSQGVAGG----KQPRAARTSA-------TVTSSRGRPPRELGTRTPGYMPIRT 52
R W Q P++ AGG ++PRA A + S R P G R+ YMP R+
Sbjct: 469 RGWDQEPAREQAGGGWRARRPRARSVDALDDLTPPSTAESGSRSPTSNGGRSRAYMPPRS 528
Query: 53 GSR 55
SR
Sbjct: 529 RSR 531
>gi|45505163 LISCH protein isoform 1 [Homo sapiens]
Length = 630
Score = 33.1 bits (74), Expect = 0.19
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 11/63 (17%)
Query: 4 RPWSQPPSQGVAGG----KQPRAARTSA-------TVTSSRGRPPRELGTRTPGYMPIRT 52
R W Q P++ AGG ++PRA A + S R P G R+ YMP R+
Sbjct: 450 RGWDQEPAREQAGGGWRARRPRARSVDALDDLTPPSTAESGSRSPTSNGGRSRAYMPPRS 509
Query: 53 GSR 55
SR
Sbjct: 510 RSR 512
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 32.7 bits (73), Expect = 0.24
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Query: 133 RCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAV------RAQGRGRKSLGA 186
R P G T+ ++ AG D P P R D AV R R R +L
Sbjct: 49 RVPRGSVTDSNHTP-AGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWG 107
Query: 187 DQRSRAGGKALEGAQEEPVPGCGRFRLGPAP 217
+ RA G L+ A P P + GPAP
Sbjct: 108 RRSRRAAGPGLDCAGSAPAPSGAQSCGGPAP 138
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 32.7 bits (73), Expect = 0.24
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Query: 133 RCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAV------RAQGRGRKSLGA 186
R P G T+ ++ AG D P P R D AV R R R +L
Sbjct: 49 RVPRGSVTDSNHTP-AGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWG 107
Query: 187 DQRSRAGGKALEGAQEEPVPGCGRFRLGPAP 217
+ RA G L+ A P P + GPAP
Sbjct: 108 RRSRRAAGPGLDCAGSAPAPSGAQSCGGPAP 138
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 32.7 bits (73), Expect = 0.24
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Query: 133 RCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAV------RAQGRGRKSLGA 186
R P G T+ ++ AG D P P R D AV R R R +L
Sbjct: 49 RVPRGSVTDSNHTP-AGLDCGPTRPSGSLTTRRPRDAGEAAVSGPSRQRRTSRARTALWG 107
Query: 187 DQRSRAGGKALEGAQEEPVPGCGRFRLGPAP 217
+ RA G L+ A P P + GPAP
Sbjct: 108 RRSRRAAGPGLDCAGSAPAPSGAQSCGGPAP 138
>gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo
sapiens]
Length = 306
Score = 32.7 bits (73), Expect = 0.24
Identities = 45/205 (21%), Positives = 67/205 (32%), Gaps = 24/205 (11%)
Query: 8 QPPSQGVAGGKQPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRPVRRAALRDK-- 65
QP + G Q R +R+S++ + E P P +G R +R + +
Sbjct: 91 QPQRRPAGGTGQRRGSRSSSSADQQGAQDREEEAAAAPA--PTSSGHRTEKRKPQQPQCR 148
Query: 66 -GCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQAS 124
R C P +++ R AA VP T +G +
Sbjct: 149 PAAGTGQRRGSGCSPSADQQR----AQDREEEATAAPVP--------------TSSGHRT 190
Query: 125 SQGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSL 184
+ + +C GT G R + P G Q RS P RAQ R ++
Sbjct: 191 EKRKRLQLQCQPAGGT-GQRRGSRSSPSRQPAGGTGQRRGSRSSPSADQQRAQDREEEAA 249
Query: 185 GADQRSRAGGKALEGAQEEPVPGCG 209
+R G G PVP G
Sbjct: 250 QPQRRPAGGTGQRRGTAAAPVPTTG 274
>gi|239753692 PREDICTED: hypothetical protein XP_002345754 [Homo
sapiens]
Length = 228
Score = 32.3 bits (72), Expect = 0.32
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
Query: 113 HDVGRTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPGPGHL-------QILER 165
H G N + E G R GT G+ + AGW P P HL Q+
Sbjct: 9 HTPGAPENKSFAGAWAETGVRRARRRGTVGTEPQAAGW-ALPASPRHLPARIGSAQLGFT 67
Query: 166 RSDPPRLAVRAQGRGR 181
R+ PPR+ RA+ R
Sbjct: 68 RALPPRVPARARSAPR 83
>gi|239742345 PREDICTED: hypothetical protein [Homo sapiens]
Length = 358
Score = 32.3 bits (72), Expect = 0.32
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 15/69 (21%)
Query: 10 PSQGVAGGKQ-------------PRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRP 56
P +G GGK P+ R +A ++S+RGRP E GTR G R +
Sbjct: 292 PDRGARGGKDAAIHLASGFSVAVPKPRRLTAELSSARGRPAHEAGTR--GGTEGRAAAAT 349
Query: 57 VRRAALRDK 65
+ R+AL +
Sbjct: 350 LPRSALTSR 358
>gi|51896035 G protein-coupled receptor kinase 6 isoform B [Homo
sapiens]
Length = 589
Score = 32.3 bits (72), Expect = 0.32
Identities = 16/45 (35%), Positives = 20/45 (44%)
Query: 139 GTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKS 183
G +GS W G PP P +L+R R+AV RKS
Sbjct: 528 GLDGSVPPDLDWKGQPPAPPKKGLLQRLFSRQRIAVETAATARKS 572
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 32.3 bits (72), Expect = 0.32
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 9/134 (6%)
Query: 79 PQPSRRQLVQVG--SGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASSQGQ--EEGPRC 134
P P RR+ S R P A P+ H G+TGNG A SQ Q +GP C
Sbjct: 11 PHPRRREAPGSPPLSPRGHCPPAPAKPMHPENKLTNH--GKTGNGGAQSQHQNVNQGPTC 68
Query: 135 PHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLGAD--QRSRA 192
G G+ A + P L+ + PP +++ + + +S+ D ++ A
Sbjct: 69 NVGSKGVGAGNHGAKANQISPSNSSLK-NPQAGVPPFSSLKGKVKRDRSVSVDSGEQREA 127
Query: 193 GGKALEGAQEEPVP 206
G +L+ +E P
Sbjct: 128 GTPSLDSEAKEVAP 141
>gi|239758117 PREDICTED: hypothetical protein [Homo sapiens]
Length = 465
Score = 32.0 bits (71), Expect = 0.41
Identities = 52/208 (25%), Positives = 77/208 (37%), Gaps = 34/208 (16%)
Query: 7 SQPPSQGVAGGKQPRAARTSATVTSSRG----RPPRE------LGTRTPGYMPIRTGSRP 56
S+P ++G GGKQPR + + SRG +P R G ++ G G +
Sbjct: 140 SRPQTRG-GGGKQPRRQKAAVAGAKSRGGEGKKPQRRGQKAATAGAKSRGGGVRSLGGKK 198
Query: 57 VRRAALRDKGCAQRHRHVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVG 116
+RR KG A R C R+ Q S GV A K + +
Sbjct: 199 MRRG---QKGAAGAKR----CGGGKQPRRRGQKASKSGGVRCQTPQKAAAQGVKSRKKLR 251
Query: 117 RTGNGQASSQGQE--EGPRC------PHGHGTEGSYRETAGWDGTPPGPGHLQILERRSD 168
+ G +A++ GQE G C G G + R+ + W G +
Sbjct: 252 QRGQ-KAAAAGQEAAAGKTCGGGGEKHRGGGDKKPLRKNSRWRGQ-------KAAAAGGK 303
Query: 169 PPRLAVRAQGRGRKSLGADQRSRAGGKA 196
P+ A A G RK L + + A K+
Sbjct: 304 KPQKAAAAGGERRKKLRRQKAAVARAKS 331
>gi|169165712 PREDICTED: hypothetical protein [Homo sapiens]
Length = 199
Score = 32.0 bits (71), Expect = 0.41
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Query: 117 RTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPG 156
RT QG PRCP G+ S AGW PPG
Sbjct: 93 RTARSPGGGQGGSASPRCPRDCGSGASAWAVAGW---PPG 129
>gi|239753682 PREDICTED: hypothetical protein XP_002345751 [Homo
sapiens]
Length = 186
Score = 32.0 bits (71), Expect = 0.41
Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 16/154 (10%)
Query: 44 TPGYMPIRTGSRPVRRAALRDKGCAQRHRHVEVCEPQPS--RRQLVQVGSGRAGVPIAAQ 101
+PG +G+R R +LR C + ++ + +P+ R QL V G +G
Sbjct: 20 SPGCTSHSSGNRAARGDSLRSSSCGLKGLNLALAPERPAADRAQLFAVAVGASGEAPGRP 79
Query: 102 VPIAEVVGKDQHDVGRTGNGQASSQ-----------GQEEGPRCPHGHGTEGSYRETAGW 150
P V G + G+ Q G+ + P R AG
Sbjct: 80 RPPGGVRGLGRRPAAGPREGRTGQQLTFFVCSRMNGGRRQAEAFPPAESQREKQR--AGS 137
Query: 151 DGTPPGPGHLQILER-RSDPPRLAVRAQGRGRKS 183
T P P +++ ++ + PPR +R R R S
Sbjct: 138 KSTAPTPFSVRVRQKMATTPPRPTLRNPVRCRAS 171
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 32.0 bits (71), Expect = 0.41
Identities = 44/181 (24%), Positives = 57/181 (31%), Gaps = 19/181 (10%)
Query: 13 GVAGGKQPRAARTSATVTSSRGRPPRELGTRTPGYMPIRTGSRPVRRAALRDKGCAQRHR 72
G A G+ R + V +RG P+ T P G+ R A R GCA
Sbjct: 300 GAAAGRGSRGEHPACGVGLARGTAPQPASTWALAARPRAGGTWTSRFEAQR--GCAH--- 354
Query: 73 HVEVCEPQPSRRQLVQVGSGRAGVPIAAQVPIAEVVGKDQHDVGRTGNGQASSQGQEEGP 132
Q +R+ A P P + R + + + P
Sbjct: 355 -------QDGQRRTRDGAGNHASEPARVWSP------PPRRQRPRRLPRASLQEEPKRRP 401
Query: 133 RCPHGHGTEGSYRETAGWDGTPPGPGHLQILERRSDPPRLAVRAQGRGRKSLGADQRSRA 192
C G + A W G P P H + RR D P RA G S G S A
Sbjct: 402 PCARPSGAGPAREGPAAWPGGAPTPPHARPTGRRQD-PEPGPRAPRGGPASSGWHAGSAA 460
Query: 193 G 193
G
Sbjct: 461 G 461
>gi|239748296 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 32.0 bits (71), Expect = 0.41
Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 16/154 (10%)
Query: 44 TPGYMPIRTGSRPVRRAALRDKGCAQRHRHVEVCEPQPS--RRQLVQVGSGRAGVPIAAQ 101
+PG +G+R R +LR C + ++ + +P+ R QL V G +G
Sbjct: 20 SPGCTSHSSGNRAARGDSLRSSSCGLKGLNLALAPERPAADRAQLFAVAVGASGEAPGRP 79
Query: 102 VPIAEVVGKDQHDVGRTGNGQASSQ-----------GQEEGPRCPHGHGTEGSYRETAGW 150
P V G + G+ Q G+ + P R AG
Sbjct: 80 RPPGGVRGLGRRPAAGPREGRTGQQLTFFVCSRMNGGRRQAEAFPPAESQREKQR--AGS 137
Query: 151 DGTPPGPGHLQILER-RSDPPRLAVRAQGRGRKS 183
T P P +++ ++ + PPR +R R R S
Sbjct: 138 KSTAPTPFSVRVRQKMATTPPRPTLRNPVRCRAS 171
>gi|88971283 PREDICTED: hypothetical protein [Homo sapiens]
Length = 199
Score = 32.0 bits (71), Expect = 0.41
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Query: 117 RTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPG 156
RT QG PRCP G+ S AGW PPG
Sbjct: 93 RTARSPGGGQGGSASPRCPRDCGSGASAWAVAGW---PPG 129
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,410,673
Number of Sequences: 37866
Number of extensions: 658357
Number of successful extensions: 2256
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 2146
Number of HSP's gapped (non-prelim): 239
length of query: 217
length of database: 18,247,518
effective HSP length: 98
effective length of query: 119
effective length of database: 14,536,650
effective search space: 1729861350
effective search space used: 1729861350
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.