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Search of human proteins with 239752235
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752235 PREDICTED: hypothetical protein XP_002348167 [Homo
sapiens]
(273 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752235 PREDICTED: hypothetical protein XP_002348167 [Homo ... 568 e-162
gi|239757736 PREDICTED: hypothetical protein [Homo sapiens] 564 e-161
gi|13899269 SRY-box 7 [Homo sapiens] 36 0.041
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 35 0.092
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 35 0.092
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 35 0.092
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 35 0.092
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 35 0.092
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 35 0.092
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 35 0.092
gi|148762982 hypothetical protein LOC387640 [Homo sapiens] 34 0.16
gi|239747084 PREDICTED: hypothetical protein XP_002343912 [Homo ... 33 0.20
gi|223633890 hypothetical protein LOC729956 [Homo sapiens] 33 0.35
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 32 0.59
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 32 0.59
gi|59938776 cAMP responsive element binding protein 5 isoform de... 32 0.78
gi|59938774 cAMP responsive element binding protein 5 isoform be... 32 0.78
gi|59938772 cAMP responsive element binding protein 5 isoform ga... 32 0.78
gi|59938770 cAMP responsive element binding protein 5 isoform al... 32 0.78
gi|110349786 Alstrom syndrome 1 [Homo sapiens] 31 1.0
gi|151301154 mucin 6, gastric [Homo sapiens] 31 1.0
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 31 1.0
gi|239735603 POM121 membrane glycoprotein-like 12 [Homo sapiens] 30 1.7
gi|154800453 tastin isoform 1 [Homo sapiens] 30 1.7
gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens] 30 2.3
gi|194328779 aspartate beta-hydroxylase domain containing 2 [Hom... 30 2.3
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 30 3.0
gi|14249452 zinc finger CCCH-type containing 10 [Homo sapiens] 30 3.0
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 30 3.0
gi|239755684 PREDICTED: hypothetical protein [Homo sapiens] 29 3.9
>gi|239752235 PREDICTED: hypothetical protein XP_002348167 [Homo
sapiens]
Length = 273
Score = 568 bits (1464), Expect = e-162
Identities = 273/273 (100%), Positives = 273/273 (100%)
Query: 1 MDTDMTRTLGSLARALPTARQPLHFRLKGAGRVCHARPVLHVDLDGATARRVMNPAGQGG 60
MDTDMTRTLGSLARALPTARQPLHFRLKGAGRVCHARPVLHVDLDGATARRVMNPAGQGG
Sbjct: 1 MDTDMTRTLGSLARALPTARQPLHFRLKGAGRVCHARPVLHVDLDGATARRVMNPAGQGG 60
Query: 61 SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS 120
SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS
Sbjct: 61 SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS 120
Query: 121 LSIPLMRGEQMQLALSKELALPHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLHHNGPS 180
LSIPLMRGEQMQLALSKELALPHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLHHNGPS
Sbjct: 121 LSIPLMRGEQMQLALSKELALPHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLHHNGPS 180
Query: 181 PTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLF 240
PTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLF
Sbjct: 181 PTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLF 240
Query: 241 LSCPPATPSASPGPPAHSIPVLTTVSFSTHIQG 273
LSCPPATPSASPGPPAHSIPVLTTVSFSTHIQG
Sbjct: 241 LSCPPATPSASPGPPAHSIPVLTTVSFSTHIQG 273
>gi|239757736 PREDICTED: hypothetical protein [Homo sapiens]
Length = 273
Score = 564 bits (1453), Expect = e-161
Identities = 271/273 (99%), Positives = 272/273 (99%)
Query: 1 MDTDMTRTLGSLARALPTARQPLHFRLKGAGRVCHARPVLHVDLDGATARRVMNPAGQGG 60
MDTDMTR LGSLARALPTARQPLHFRLKGAGRVCHARPVLHVDLDGATARRVMNPAGQGG
Sbjct: 1 MDTDMTRALGSLARALPTARQPLHFRLKGAGRVCHARPVLHVDLDGATARRVMNPAGQGG 60
Query: 61 SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS 120
SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS
Sbjct: 61 SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS 120
Query: 121 LSIPLMRGEQMQLALSKELALPHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLHHNGPS 180
LSIPLMRGEQMQLALSKELALPHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVL+HNGPS
Sbjct: 121 LSIPLMRGEQMQLALSKELALPHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLYHNGPS 180
Query: 181 PTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLF 240
PTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLF
Sbjct: 181 PTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLF 240
Query: 241 LSCPPATPSASPGPPAHSIPVLTTVSFSTHIQG 273
LSCPPATPSASPGPPAHSIPVLTTVSFSTHIQG
Sbjct: 241 LSCPPATPSASPGPPAHSIPVLTTVSFSTHIQG 273
>gi|13899269 SRY-box 7 [Homo sapiens]
Length = 388
Score = 35.8 bits (81), Expect = 0.041
Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 180 SPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSP-ESLKSPQ 238
SP +E P PH+P HP S E+A S H + L QSP S+ SP
Sbjct: 222 SPCQEEHGHPRRIPHLPGHP-------YSPEYAPSPLHCSHPLGSLALGQSPGVSMMSP- 273
Query: 239 LFLSCPPATPSASPGP--PAHS 258
CPP+ SP P HS
Sbjct: 274 -VPGCPPSPAYYSPATYHPLHS 294
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 34.7 bits (78), Expect = 0.092
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 10/90 (11%)
Query: 177 NGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKS 236
N P+P A P S P P ++ S Q+P S +
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSA----------PPETTAAPPTPSATTQAPPSSSA 207
Query: 237 PQLFLSCPPATPSASPGPPAHSIPVLTTVS 266
P + PP P+ +P PP+ S P TT +
Sbjct: 208 PPETTAAPPTPPATTPAPPSSSAPPETTAA 237
Score = 29.3 bits (64), Expect = 3.9
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 215 TSHAGLKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPPAHSIPVLTTVS 266
+S + S +P + +PQ + PP + +P PP+ S P TT +
Sbjct: 140 SSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAA 191
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 34.7 bits (78), Expect = 0.092
Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 6/119 (5%)
Query: 159 GQCGPLQQKHHTYHVLHHNGPSPTHQEDAEP---LLSPHIPEHPENNVRACRSDEHALST 215
G P +Q+ H L H P P A P L P P P S +T
Sbjct: 296 GSAPPERQEQR--HSLPHPYPYPAPAYTAHPPGHRLVPAAPPGPGPRPPGAESHGCLPAT 353
Query: 216 SHAGLKVQGSRLMQSP-ESLKSPQLFLSCPPATPSASPGPPAHSIPVLTTVSFSTHIQG 273
G ++ SR+ +S +S SP +C P PS PG P + ++ S +T ++G
Sbjct: 354 RPPGSDLRESRVQRSRMDSSVSPAATTACVPYAPSRPPGLPGTTTSSSSSSSSNTGLRG 412
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 34.7 bits (78), Expect = 0.092
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 10/90 (11%)
Query: 177 NGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKS 236
N P+P A P S P P ++ S Q+P S +
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSA----------PPETTAAPPTPSATTQAPPSSSA 207
Query: 237 PQLFLSCPPATPSASPGPPAHSIPVLTTVS 266
P + PP P+ +P PP+ S P TT +
Sbjct: 208 PPETTAAPPTPPATTPAPPSSSAPPETTAA 237
Score = 29.3 bits (64), Expect = 3.9
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 215 TSHAGLKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPPAHSIPVLTTVS 266
+S + S +P + +PQ + PP + +P PP+ S P TT +
Sbjct: 140 SSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAA 191
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 34.7 bits (78), Expect = 0.092
Identities = 23/90 (25%), Positives = 33/90 (36%), Gaps = 10/90 (11%)
Query: 177 NGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKS 236
N P+P A P S P P ++ S Q+P S +
Sbjct: 158 NSPAPQDTTAAPPTPSATTPAPPSSSA----------PPETTAAPPTPSATTQAPPSSSA 207
Query: 237 PQLFLSCPPATPSASPGPPAHSIPVLTTVS 266
P + PP P+ +P PP+ S P TT +
Sbjct: 208 PPETTAAPPTPPATTPAPPSSSAPPETTAA 237
Score = 29.3 bits (64), Expect = 3.9
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 215 TSHAGLKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPPAHSIPVLTTVS 266
+S + S +P + +PQ + PP + +P PP+ S P TT +
Sbjct: 140 SSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAA 191
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 34.7 bits (78), Expect = 0.092
Identities = 36/135 (26%), Positives = 41/135 (30%), Gaps = 7/135 (5%)
Query: 142 PHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLHHNGPSPTHQEDAEPLLSPHIPEHPEN 201
PH P L L G G H LH GP H A PLL P P
Sbjct: 260 PHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFG 319
Query: 202 NVRACRSDEHALSTS------HAGLKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPP 255
+ L TS H L++ S+ + Q P A P P PP
Sbjct: 320 LPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP-PP 378
Query: 256 AHSIPVLTTVSFSTH 270
IP L H
Sbjct: 379 TTPIPQLPAPQAHKH 393
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 34.7 bits (78), Expect = 0.092
Identities = 36/135 (26%), Positives = 41/135 (30%), Gaps = 7/135 (5%)
Query: 142 PHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLHHNGPSPTHQEDAEPLLSPHIPEHPEN 201
PH P L L G G H LH GP H A PLL P P
Sbjct: 814 PHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFG 873
Query: 202 NVRACRSDEHALSTS------HAGLKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPP 255
+ L TS H L++ S+ + Q P A P P PP
Sbjct: 874 LPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP-PP 932
Query: 256 AHSIPVLTTVSFSTH 270
IP L H
Sbjct: 933 TTPIPQLPAPQAHKH 947
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 34.7 bits (78), Expect = 0.092
Identities = 36/135 (26%), Positives = 41/135 (30%), Gaps = 7/135 (5%)
Query: 142 PHQEAVPRWLWVLLGLWGQCGPLQQKHHTYHVLHHNGPSPTHQEDAEPLLSPHIPEHPEN 201
PH P L L G G H LH GP H A PLL P P
Sbjct: 814 PHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFG 873
Query: 202 NVRACRSDEHALSTS------HAGLKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPP 255
+ L TS H L++ S+ + Q P A P P PP
Sbjct: 874 LPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP-PP 932
Query: 256 AHSIPVLTTVSFSTH 270
IP L H
Sbjct: 933 TTPIPQLPAPQAHKH 947
>gi|148762982 hypothetical protein LOC387640 [Homo sapiens]
Length = 908
Score = 33.9 bits (76), Expect = 0.16
Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 11/87 (12%)
Query: 159 GQCGPLQQKHHTYHVLHHN-----GPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHAL 213
G C P HH +H HH+ P +H PH+ PE +C SD +
Sbjct: 331 GFCPPPHHHHHHHHHHHHHHHRAQPPQQSHHPPHHHRPQPHLGSFPE----SCSSDSESS 386
Query: 214 STS-HAGLKVQ-GSRLMQSPESLKSPQ 238
S S HA GS L S S+ S +
Sbjct: 387 SYSDHAANDSDFGSSLSSSSNSVSSEE 413
>gi|239747084 PREDICTED: hypothetical protein XP_002343912 [Homo
sapiens]
Length = 313
Score = 33.5 bits (75), Expect = 0.20
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 22/133 (16%)
Query: 161 CGPLQQKHHTYHVLH----------HNGPSPTHQEDAEP-LLSPHIP----EHPENNVRA 205
CG L++ H + +L+ H G ED P LL P P +HP +
Sbjct: 15 CG-LREAHTGHRILYMIKLLPESQLHGGGDDRTSEDVPPKLLRPSTPWDATKHPPGSFFP 73
Query: 206 CRSDEHALSTS-HAGLKVQGSRLMQSPESLKS-----PQLFLSCPPATPSASPGPPAHSI 259
+ A+ S G+K + R +SP S P P A P A+P PP
Sbjct: 74 SAHERRAVGCSGRRGIKRRELRPRRSPAEPGSARRNRPARVPDSPAARPGAAPSPPERWA 133
Query: 260 PVLTTVSFSTHIQ 272
++F + +Q
Sbjct: 134 DFAVNLNFPSRLQ 146
>gi|223633890 hypothetical protein LOC729956 [Homo sapiens]
Length = 538
Score = 32.7 bits (73), Expect = 0.35
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 199 PENNVRACRSDEHALSTS----------HAGLKVQGSRLMQSPESLKSPQLFLSCPPATP 248
P N R S EH L A L Q L+ SPE+L+ + L PP +P
Sbjct: 376 PAPNPRRVMSQEHLLGDGGRSRYEFTLPRARLVSQEHLLLSSPEALRQSREHLLSPPRSP 435
Query: 249 SASPGPPAHS 258
+ P P A +
Sbjct: 436 ALPPDPTARA 445
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 32.0 bits (71), Expect = 0.59
Identities = 49/207 (23%), Positives = 75/207 (36%), Gaps = 15/207 (7%)
Query: 61 SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS 120
S + H + R K +PP R G++ Q ++ G+ EP + R +P++ G
Sbjct: 100 SLSPHQERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGR 159
Query: 121 LSIPLMRGEQMQLALSKELALPHQEA--VPRWLWVLLGLWGQCGPLQQKHHTYHVLHHNG 178
LS P G Q P + + VPR GQ + + H L G
Sbjct: 160 LSAPPRHGPHPQSFRRPSAHPPGRGSGRVPR---------GQPEQQAWEQRSSHFLAPEG 210
Query: 179 PSPTHQEDAEPLLSPH-IPEHPENNVRACRSDEHALSTSHAGLKVQG--SRLMQSPESLK 235
+ A+P +P P E R A + G Q +RL+ +
Sbjct: 211 SVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSL 270
Query: 236 SPQLFLSCPPATPS-ASPGPPAHSIPV 261
+ L S PP P S PP + P+
Sbjct: 271 AASLARSPPPLQPRLGSASPPRLAAPL 297
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 32.0 bits (71), Expect = 0.59
Identities = 49/207 (23%), Positives = 75/207 (36%), Gaps = 15/207 (7%)
Query: 61 SFTKHHDVQRRKSTPPRKTLRLGRSIQTRKHLGAACQSEPGNTSTRPVNLNPQKTPRRGS 120
S + H + R K +PP R G++ Q ++ G+ EP + R +P++ G
Sbjct: 100 SLSPHQERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGR 159
Query: 121 LSIPLMRGEQMQLALSKELALPHQEA--VPRWLWVLLGLWGQCGPLQQKHHTYHVLHHNG 178
LS P G Q P + + VPR GQ + + H L G
Sbjct: 160 LSAPPRHGPHPQSFRRPSAHPPGRGSGRVPR---------GQPEQQAWEQRSSHFLAPEG 210
Query: 179 PSPTHQEDAEPLLSPH-IPEHPENNVRACRSDEHALSTSHAGLKVQG--SRLMQSPESLK 235
+ A+P +P P E R A + G Q +RL+ +
Sbjct: 211 SVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSL 270
Query: 236 SPQLFLSCPPATPS-ASPGPPAHSIPV 261
+ L S PP P S PP + P+
Sbjct: 271 AASLARSPPPLQPRLGSASPPRLAAPL 297
>gi|59938776 cAMP responsive element binding protein 5 isoform delta
[Homo sapiens]
Length = 369
Score = 31.6 bits (70), Expect = 0.78
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 163 PLQQKHHTYHVLHHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKV 222
P Q HH + HH+ S H A SPH P H N + S A ++
Sbjct: 162 PHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQ----------VSPATQQM 211
Query: 223 QGSRLMQSPE 232
Q ++ +Q P+
Sbjct: 212 QPTQTIQPPQ 221
Score = 29.6 bits (65), Expect = 3.0
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 13/79 (16%)
Query: 168 HHTY-----HVLHHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKV 222
HH Y H HH P P HQ++ PH H + H G +
Sbjct: 148 HHPYPHQHQHPAHHPHPQPHHQQN-----HPHHHSHSHLHAHPAHHQTSPHPPLHTGNQA 202
Query: 223 Q---GSRLMQSPESLKSPQ 238
Q ++ MQ ++++ PQ
Sbjct: 203 QVSPATQQMQPTQTIQPPQ 221
>gi|59938774 cAMP responsive element binding protein 5 isoform beta
[Homo sapiens]
Length = 501
Score = 31.6 bits (70), Expect = 0.78
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 163 PLQQKHHTYHVLHHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKV 222
P Q HH + HH+ S H A SPH P H N + S A ++
Sbjct: 294 PHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQ----------VSPATQQM 343
Query: 223 QGSRLMQSPE 232
Q ++ +Q P+
Sbjct: 344 QPTQTIQPPQ 353
Score = 29.6 bits (65), Expect = 3.0
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 13/79 (16%)
Query: 168 HHTY-----HVLHHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKV 222
HH Y H HH P P HQ++ PH H + H G +
Sbjct: 280 HHPYPHQHQHPAHHPHPQPHHQQN-----HPHHHSHSHLHAHPAHHQTSPHPPLHTGNQA 334
Query: 223 Q---GSRLMQSPESLKSPQ 238
Q ++ MQ ++++ PQ
Sbjct: 335 QVSPATQQMQPTQTIQPPQ 353
>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
[Homo sapiens]
Length = 475
Score = 31.6 bits (70), Expect = 0.78
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 163 PLQQKHHTYHVLHHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKV 222
P Q HH + HH+ S H A SPH P H N + S A ++
Sbjct: 268 PHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQ----------VSPATQQM 317
Query: 223 QGSRLMQSPE 232
Q ++ +Q P+
Sbjct: 318 QPTQTIQPPQ 327
Score = 29.6 bits (65), Expect = 3.0
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 13/79 (16%)
Query: 168 HHTY-----HVLHHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKV 222
HH Y H HH P P HQ++ PH H + H G +
Sbjct: 254 HHPYPHQHQHPAHHPHPQPHHQQN-----HPHHHSHSHLHAHPAHHQTSPHPPLHTGNQA 308
Query: 223 Q---GSRLMQSPESLKSPQ 238
Q ++ MQ ++++ PQ
Sbjct: 309 QVSPATQQMQPTQTIQPPQ 327
>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
[Homo sapiens]
Length = 508
Score = 31.6 bits (70), Expect = 0.78
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 163 PLQQKHHTYHVLHHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKV 222
P Q HH + HH+ S H A SPH P H N + S A ++
Sbjct: 301 PHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTGNQAQ----------VSPATQQM 350
Query: 223 QGSRLMQSPE 232
Q ++ +Q P+
Sbjct: 351 QPTQTIQPPQ 360
Score = 29.6 bits (65), Expect = 3.0
Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 13/79 (16%)
Query: 168 HHTY-----HVLHHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKV 222
HH Y H HH P P HQ++ PH H + H G +
Sbjct: 287 HHPYPHQHQHPAHHPHPQPHHQQN-----HPHHHSHSHLHAHPAHHQTSPHPPLHTGNQA 341
Query: 223 Q---GSRLMQSPESLKSPQ 238
Q ++ MQ ++++ PQ
Sbjct: 342 QVSPATQQMQPTQTIQPPQ 360
>gi|110349786 Alstrom syndrome 1 [Homo sapiens]
Length = 4169
Score = 31.2 bits (69), Expect = 1.0
Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 172 HVLHHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSD--EHALSTSHAGLKVQGSRLMQ 229
HV H+ PSP HQ+ P L I C++ +H + +H+ L QG +
Sbjct: 2900 HVRKHHSPSPQHQDYVAPDLPSCIFLEQRELFEQCKAPYVDHQMRENHSPLP-QGQDSIA 2958
Query: 230 SPESLKSPQLFLSCPPATPSASPGPPAHSIPV 261
S L SP C P H P+
Sbjct: 2959 S--DLPSPISLEQCQSKAPGVDDQMNKHHFPL 2988
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 31.2 bits (69), Expect = 1.0
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 18/98 (18%)
Query: 179 PSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSR------LMQSPE 232
P+P+H E P H+P P + S ++ +HA + S + P
Sbjct: 1434 PTPSHPETTLPT---HVP--PFSTSLVTPSTHTVITPTHAQMATSASNHSAPTGTIPPPT 1488
Query: 233 SLKSPQLFLSCPPATPSASPGPPAHSIPVLTTVSFSTH 270
+LK+ + PP TP+ S AHS SFST+
Sbjct: 1489 TLKATGSTHTAPPITPTTSGTSQAHS-------SFSTN 1519
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 31.2 bits (69), Expect = 1.0
Identities = 37/120 (30%), Positives = 44/120 (36%), Gaps = 31/120 (25%)
Query: 162 GPLQQKHH--TYHVLHHNGPSPTHQEDAEPLLSPHIPE----------------HPENNV 203
GPL HH +H HH P H A P PH PE P+ ++
Sbjct: 991 GPLPPAHHHPPHHHHHHAPPPQPHHHHAHP---PHPPEMETGGSPDDPPPRLALGPQPSL 1047
Query: 204 RACRS-----DEHALSTSHAGLKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPPAHS 258
R R A S SH G G Q P +L+ QL PP SA+ PA S
Sbjct: 1048 RGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGP-ALRYFQL----PPRAASAAMYVPARS 1102
>gi|239735603 POM121 membrane glycoprotein-like 12 [Homo sapiens]
Length = 296
Score = 30.4 bits (67), Expect = 1.7
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 224 GSRLMQSPESLKSPQLFLSCPPATPSASPGPPAHSIPVLTTVSFSTHIQ 272
G L+Q P++L +P +S P+TP +P P P +HIQ
Sbjct: 19 GEPLLQGPDALAAP---MSRSPSTPQTTPSPQGRQSPWPLRSLTQSHIQ 64
>gi|154800453 tastin isoform 1 [Homo sapiens]
Length = 778
Score = 30.4 bits (67), Expect = 1.7
Identities = 32/99 (32%), Positives = 36/99 (36%), Gaps = 29/99 (29%)
Query: 159 GQCGPLQQKHHTYHVLHHNGPSPTHQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHA 218
GQC PL NG S + +PLL+ R + EH TSH
Sbjct: 452 GQCVPL------------NGGSSLDMVELQPLLT--------EISRTLNATEHNSGTSHL 491
Query: 219 G--LKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPP 255
LK G PE PQ CPP A PGPP
Sbjct: 492 PGLLKHSGLPKPCLPEECGEPQ---PCPP----AEPGPP 523
>gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens]
Length = 1049
Score = 30.0 bits (66), Expect = 2.3
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 19/92 (20%)
Query: 185 EDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLFLSCP 244
ED+ LSP P E+ A E +S S SP + +P F S
Sbjct: 189 EDSSDALSPDQPASQESQGSAASPSEPKVSES------------PSPVTTNTPAQFASVS 236
Query: 245 PATP-------SASPGPPAHSIPVLTTVSFST 269
P P +A PP + PVL T + S+
Sbjct: 237 PTVPEFLKTPPTADQPPPRPAAPVLPTNTVSS 268
>gi|194328779 aspartate beta-hydroxylase domain containing 2 [Homo
sapiens]
Length = 369
Score = 30.0 bits (66), Expect = 2.3
Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 182 THQEDAEPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQSPESLKSPQLFL 241
TH E L ++ E+ A R + H G++ QG L P K FL
Sbjct: 117 THNEGLNQKLYHNLQEY------AKRYSWSGMGRIHKGIREQGRYLNSRPSIQKPEVFFL 170
Query: 242 SCPPATPSASPGPPAHSIPVL 262
P TP S H + VL
Sbjct: 171 PDLPTTPYFSRDAQKHDVEVL 191
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 29.6 bits (65), Expect = 3.0
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 19/107 (17%)
Query: 179 PSPTHQEDA----EPLLSPHIPEHPENNVRACRSDEHALSTSHAGLKVQGSRLMQS---- 230
P PT D P ++PH P P + H + +H+ + + Q
Sbjct: 1155 PDPTMAPDPITTLNPTVTPHFPTTPHPT-----TTPHPTTITHSTMIPDPTTTPQPFTTI 1209
Query: 231 ------PESLKSPQLFLSCPPATPSASPGPPAHSIPVLTTVSFSTHI 271
P+ +PQ F + P T S P + P TT++ ST I
Sbjct: 1210 THSTMIPDPTTTPQPFTTMQPTTTPHSTTPHPTTTPHPTTITHSTMI 1256
>gi|14249452 zinc finger CCCH-type containing 10 [Homo sapiens]
Length = 434
Score = 29.6 bits (65), Expect = 3.0
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 211 HALSTSHAGLKVQGSRLMQ-SPESLKSPQLFLSCPP---ATPSASPGPPAHSIPVLTTVS 266
H ++ +H L Q + S + L +P + PP A P+A P PP H P +T +S
Sbjct: 307 HGIAQTHTTLSSQALQPRPVSQQELVAPAGAPAAPPTNAAPPAAPPPPPPHLTPEITPLS 366
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 29.6 bits (65), Expect = 3.0
Identities = 51/190 (26%), Positives = 75/190 (39%), Gaps = 35/190 (18%)
Query: 97 QSEPGNTSTRPVNLNPQKTPRRGSLSIPL------MRGEQMQLALSKELALPHQEAVPRW 150
QS G S P + PQ P+ PL ++GE+ Q +L +++ + P
Sbjct: 582 QSPQGEDSLSP-HYFPQSPPQGEDSMSPLYFPQSPLQGEEFQSSLQSPVSIC-SSSTPSS 639
Query: 151 LWVLLGLWGQC---GPLQQKHHTYHV----LHHNGP--SPTHQEDAEPLLSP-HIPEHP- 199
L Q GP+Q H+ +H P SP + E LSP IP+ P
Sbjct: 640 LPQSFPESSQSPPEGPVQSPLHSPQSPPEGMHSQSPLQSPESAPEGEDSLSPLQIPQSPL 699
Query: 200 --ENNVRACRSD------EHALSTSH------AGLKVQGSRLMQSPESLKSPQLFLSCPP 245
E+++ + E +LS H G Q S +QSP S+ S LS P
Sbjct: 700 EGEDSLSSLHFPQSPPEWEDSLSPLHFPQFPPQGEDFQSS--LQSPVSICSSSTSLSLPQ 757
Query: 246 ATPSASPGPP 255
+ P + PP
Sbjct: 758 SFPESPQSPP 767
>gi|239755684 PREDICTED: hypothetical protein [Homo sapiens]
Length = 415
Score = 29.3 bits (64), Expect = 3.9
Identities = 55/219 (25%), Positives = 76/219 (34%), Gaps = 68/219 (31%)
Query: 87 QTRKHLGAACQSEPGNTSTRPVNLNPQKTP-------RRGSLSIPLMRGEQMQLALSKEL 139
QTR + ++ + P N +NPQ+ P R SLS+ R + ++
Sbjct: 132 QTRSAVSSSAEQPPSN-------MNPQRQPDARRKNLERNSLSVLTNRDLLREGQRDEQQ 184
Query: 140 ALPHQEAVPRWLW-------VLLGLWGQCGPLQQKHHTYHVLHHN--------------- 177
PH+ A + + LGL G L Q+ HVL
Sbjct: 185 GQPHRNARDHLVHSQLQSQPLELGLRG----LLQQEIREHVLRGQLSDGHGCGAPGSTRR 240
Query: 178 -----------GPSPTHQEDAEPLLSPHIPEHPEN---NVRACRSDEHALSTS----HAG 219
PSP+H+ A LS + HP +V SD LS S AG
Sbjct: 241 SGYSRRRESCAAPSPSHRPGARLSLSLCLLPHPACLCVSVPQAPSDSAGLSRSLPPPPAG 300
Query: 220 LKVQGSRLMQSPESLKSPQLFLSCPPATPSASPGPPAHS 258
G+R ++ FL PA P SPG HS
Sbjct: 301 RGGAGTRELR----------FLRFHPARPCKSPGRARHS 329
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,349,405
Number of Sequences: 37866
Number of extensions: 708721
Number of successful extensions: 3879
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 3751
Number of HSP's gapped (non-prelim): 156
length of query: 273
length of database: 18,247,518
effective HSP length: 101
effective length of query: 172
effective length of database: 14,423,052
effective search space: 2480764944
effective search space used: 2480764944
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.