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Search of human proteins with 239751993
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]
(278 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757467 PREDICTED: hypothetical protein [Homo sapiens] 573 e-164
gi|239751993 PREDICTED: hypothetical protein [Homo sapiens] 573 e-164
gi|239746476 PREDICTED: hypothetical protein [Homo sapiens] 570 e-163
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 59 5e-09
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 57 2e-08
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 53 3e-07
gi|18959210 WIRE protein [Homo sapiens] 53 3e-07
gi|110832843 TBP-associated factor 4 [Homo sapiens] 52 4e-07
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 52 4e-07
gi|163965366 nascent polypeptide-associated complex alpha subuni... 52 6e-07
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 52 7e-07
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 51 1e-06
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 51 1e-06
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 51 1e-06
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 50 2e-06
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 50 2e-06
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 49 5e-06
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 49 5e-06
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 49 6e-06
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 49 6e-06
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 49 6e-06
gi|38373671 SEC24-related protein C [Homo sapiens] 49 6e-06
gi|38373669 SEC24-related protein C [Homo sapiens] 49 6e-06
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 48 8e-06
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 48 1e-05
gi|33286446 opioid growth factor receptor [Homo sapiens] 47 1e-05
gi|33356148 formin-like 1 [Homo sapiens] 47 1e-05
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 47 2e-05
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 47 2e-05
gi|217416343 fibrosin-like 1 [Homo sapiens] 47 2e-05
>gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 573 bits (1477), Expect = e-164
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 1 MEVAGLFLGGRGAGQRVPSVLLAWASWRLLGRIPSPCAGRGLEALGRDWRGTVAEPRPEA 60
MEVAGLFLGGRGAGQRVPSVLLAWASWRLLGRIPSPCAGRGLEALGRDWRGTVAEPRPEA
Sbjct: 1 MEVAGLFLGGRGAGQRVPSVLLAWASWRLLGRIPSPCAGRGLEALGRDWRGTVAEPRPEA 60
Query: 61 QGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPS 120
QGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPS
Sbjct: 61 QGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPS 120
Query: 121 PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVC 180
PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVC
Sbjct: 121 PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVC 180
Query: 181 PPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPS 240
PPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPS
Sbjct: 181 PPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPS 240
Query: 241 LHPDPAQTFVTTPSLSPAGWVGGIPLCRWLPEAGQASW 278
LHPDPAQTFVTTPSLSPAGWVGGIPLCRWLPEAGQASW
Sbjct: 241 LHPDPAQTFVTTPSLSPAGWVGGIPLCRWLPEAGQASW 278
>gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 573 bits (1477), Expect = e-164
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 1 MEVAGLFLGGRGAGQRVPSVLLAWASWRLLGRIPSPCAGRGLEALGRDWRGTVAEPRPEA 60
MEVAGLFLGGRGAGQRVPSVLLAWASWRLLGRIPSPCAGRGLEALGRDWRGTVAEPRPEA
Sbjct: 1 MEVAGLFLGGRGAGQRVPSVLLAWASWRLLGRIPSPCAGRGLEALGRDWRGTVAEPRPEA 60
Query: 61 QGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPS 120
QGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPS
Sbjct: 61 QGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPS 120
Query: 121 PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVC 180
PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVC
Sbjct: 121 PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVC 180
Query: 181 PPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPS 240
PPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPS
Sbjct: 181 PPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPS 240
Query: 241 LHPDPAQTFVTTPSLSPAGWVGGIPLCRWLPEAGQASW 278
LHPDPAQTFVTTPSLSPAGWVGGIPLCRWLPEAGQASW
Sbjct: 241 LHPDPAQTFVTTPSLSPAGWVGGIPLCRWLPEAGQASW 278
>gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 570 bits (1469), Expect = e-163
Identities = 277/278 (99%), Positives = 277/278 (99%)
Query: 1 MEVAGLFLGGRGAGQRVPSVLLAWASWRLLGRIPSPCAGRGLEALGRDWRGTVAEPRPEA 60
MEVAGLFLGGRGAGQRVPSVLLAWASWRLLG IPSPCAGRGLEALGRDWRGTVAEPRPEA
Sbjct: 1 MEVAGLFLGGRGAGQRVPSVLLAWASWRLLGCIPSPCAGRGLEALGRDWRGTVAEPRPEA 60
Query: 61 QGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPS 120
QGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPS
Sbjct: 61 QGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPS 120
Query: 121 PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVC 180
PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVC
Sbjct: 121 PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVC 180
Query: 181 PPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPS 240
PPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPS
Sbjct: 181 PPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPS 240
Query: 241 LHPDPAQTFVTTPSLSPAGWVGGIPLCRWLPEAGQASW 278
LHPDPAQTFVTTPSLSPAGWVGGIPLCRWLPEAGQASW
Sbjct: 241 LHPDPAQTFVTTPSLSPAGWVGGIPLCRWLPEAGQASW 278
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 58.9 bits (141), Expect = 5e-09
Identities = 52/160 (32%), Positives = 62/160 (38%), Gaps = 13/160 (8%)
Query: 70 NARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRAR 129
NA RV+ R G T PAPP A P G A AAAAAP P P P+P AR
Sbjct: 95 NAARVQPPRRGA-TPPAPPRA------PRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPAR 147
Query: 130 NSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLA- 188
+ + PSP P+ R R A+ PA V P P P V A
Sbjct: 148 APRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAR 207
Query: 189 --CLVSSPHVPA---SLTPPPTRGSPEIAENSKRSPGTGK 223
L P PA PPP + P + R+ G +
Sbjct: 208 EPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAAR 247
Score = 39.3 bits (90), Expect = 0.004
Identities = 44/149 (29%), Positives = 53/149 (35%), Gaps = 23/149 (15%)
Query: 26 SWRLLGRIPSPCAGRGLEALGRDWRGT------VAEPRPEAQGRVPSFRSNARRVRSVRG 79
S+R R+ P G A R RG A P A P+ + A R+ R
Sbjct: 92 SYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRA 151
Query: 80 GGVTAPAPPDAEVGSGRPAGLAARAAA-AAPRSLRKPSPSPSPSLRRRRA------RNSP 132
A APP G +P A RAA AAP P+ +P RRA P
Sbjct: 152 AAAAATAPPSP--GPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREP 209
Query: 133 GIRPSPSP--------SPSPSPSPSPARG 153
+ P P P P P P P P G
Sbjct: 210 PLPPPPQPPAPPQQQQPPPPQPQPPPEGG 238
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 56.6 bits (135), Expect = 2e-08
Identities = 51/167 (30%), Positives = 69/167 (41%), Gaps = 31/167 (18%)
Query: 103 RAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSP-----SPSP-----------SP 146
R + + P + R+ SPSP+P RRRR P R +PSP SPSP SP
Sbjct: 547 RRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSP 606
Query: 147 SPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTR 206
SP P R ++SP P RR SP PP V SP +P R
Sbjct: 607 SPPPKR-------RTASPPPPPK----RRASPSPPPKRRV----SHSPPPKQRSSPVTKR 651
Query: 207 GSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTTP 253
SP ++ ++ + +R+ R + PS P QT + P
Sbjct: 652 RSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPP 698
Score = 45.1 bits (105), Expect = 7e-05
Identities = 63/241 (26%), Positives = 84/241 (34%), Gaps = 31/241 (12%)
Query: 34 PSPCAGRGLEALGRDWRGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVG 93
PSP R E R R P P + R PS RR R T PP
Sbjct: 531 PSP-RKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRR-------TPTPPPRRRTP 582
Query: 94 SGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSP--------SPSPS 145
S P + +P R+ SPSP P R P R SPSP SP P
Sbjct: 583 SPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPK 642
Query: 146 PSPSPARGGRWTTCAS-----SSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVP-AS 199
SP R + +S SSP+ + + + PSP P P S
Sbjct: 643 QRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSP--------RPRAPQTS 694
Query: 200 LTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHP-SLLPSLHPDPAQTFVTTPSLSPA 258
+PPP R + ++SP + + R+ P + + P P + S S +
Sbjct: 695 SSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVS 754
Query: 259 G 259
G
Sbjct: 755 G 755
Score = 39.7 bits (91), Expect = 0.003
Identities = 39/125 (31%), Positives = 55/125 (44%), Gaps = 14/125 (11%)
Query: 56 PRPEAQGRVPSFRSNARRVRS----VRGGGVTAPAPPDAEVGSGRPAGLAAR-------- 103
P+P + PS R A + S VR G ++P + S RP +R
Sbjct: 676 PQPNKR-HSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIK 734
Query: 104 -AAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASS 162
AA+ +P+S+R+ S S S S A P PSP S SPS + SPA + +
Sbjct: 735 KAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTP 794
Query: 163 SPALP 167
SP+ P
Sbjct: 795 SPSPP 799
Score = 38.1 bits (87), Expect = 0.009
Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 5/119 (4%)
Query: 68 RSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRR 127
RS RR R ++ + + S P + ++ PR R+ SPS SP RRR
Sbjct: 342 RSPVRRRRR-SSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPP--RRR 398
Query: 128 ARNSPGIRPSPSPSPSPSPSPS-PARGGRWTTC-ASSSPALPGTDGVLRRMSPVCPPSP 184
R SP P P SP+P S R R + +S + G +R SP P P
Sbjct: 399 HRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKP 457
Score = 34.7 bits (78), Expect = 0.094
Identities = 56/212 (26%), Positives = 76/212 (35%), Gaps = 46/212 (21%)
Query: 53 VAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSL 112
V +P P + + PS N+++ + E RP +R+ + +
Sbjct: 247 VPKPEPIPEPKEPSPEKNSKK---------------EKEKEKTRPR---SRSRSKSRSRT 288
Query: 113 RKPSPSPSPSLRRRRARN---SPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGT 169
R SPS + RR R+R+ SP RPSP PSP P R +P
Sbjct: 289 RSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRR-------------MPPP 335
Query: 170 DGVLRRMSPV--CPPSPVVLACLVSSPHVPASLTP---PPTRGSPEIAENSKRSPGTGKK 224
R SPV S L+ SS S +P PP R S + + SP
Sbjct: 336 PRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPP 395
Query: 225 SRQGRLRSLHPSLLPSLHPDPAQTFVTTPSLS 256
R+ R PS P P P TP S
Sbjct: 396 RRRHR-----PS--PPATPPPKTRHSPTPQQS 420
Score = 32.0 bits (71), Expect = 0.61
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Query: 50 RGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAP 109
RG + P+ Q PS R R R+ + A P + S R + + +
Sbjct: 702 RGASSSPQ-RRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQ--SVRRVSSSRSVSGSPE 758
Query: 110 RSLRKPSPSPSPSLRRRRARN-SPGI----RPSPSPSPSPSPSPSPARGGR 155
+ +KP PSP + + N SP + SP+PSPSP + GG+
Sbjct: 759 PAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGK 809
Score = 30.4 bits (67), Expect = 1.8
Identities = 35/133 (26%), Positives = 50/133 (37%), Gaps = 18/133 (13%)
Query: 122 SLRRRRARNSPGIRPSPSPSPSPSPSP-------SPARGGRWTTCASS----------SP 164
S +R SP R S SPSP SP S +R R T + S +P
Sbjct: 162 SREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTP 221
Query: 165 ALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKK 224
LP ++ S S + + +P P P + S + E K P + +
Sbjct: 222 ELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSR 281
Query: 225 SR-QGRLRSLHPS 236
S+ + R RS PS
Sbjct: 282 SKSRSRTRSRSPS 294
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 53.1 bits (126), Expect = 3e-07
Identities = 62/215 (28%), Positives = 89/215 (41%), Gaps = 22/215 (10%)
Query: 28 RLLGRIPSPCAGRGLEALGR---DWRGTVAE---PRPEAQGRVP--SFRSNARRVRSVRG 79
RLL R+ S + E R GT +E P E +P S R+ A R R R
Sbjct: 1100 RLLLRLASGASSSSSEEQRRASETLSGTGSEEDTPASEPAAALPRKSGRAAATRSRIPRP 1159
Query: 80 GGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSP--GIRPS 137
G+ P P A+ + R G A A L+ +P S + R + P G+ P
Sbjct: 1160 IGLRMPMPVAAQQPASRSHGAAPALDTAITSRLQLQTPPGSATAADLRPKQPPGRGLGPG 1219
Query: 138 PSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVP 197
+ + + P+P R T+ A ++ A P + + RR S PSP A P VP
Sbjct: 1220 RAQAGARPPAPRSPRLPASTSAARNASASPRSQSLSRRES----PSPSHQA----RPGVP 1271
Query: 198 ASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRS 232
PP R P+ SPG KK +G+L++
Sbjct: 1272 PPRGVPPARAQPD----GTPSPGGSKKGPRGKLQA 1302
>gi|18959210 WIRE protein [Homo sapiens]
Length = 440
Score = 52.8 bits (125), Expect = 3e-07
Identities = 58/233 (24%), Positives = 80/233 (34%), Gaps = 41/233 (17%)
Query: 56 PRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKP 115
PR + R N ++ P PP + P L ++ A + KP
Sbjct: 149 PRMQRPSLPDLSRPNTTSSTGMKHSSSAPPPPPPGRRANAPPTPLPMHSSKAPAYNREKP 208
Query: 116 SPSPSPSLRRRRARNSPGIRPSPSPSPSP------------SPSPSPAR------GGRWT 157
P P+P R R P P P PSP +P P P R G +
Sbjct: 209 LP-PTPGQRLHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPPPYRQPPGVPNGPSS 267
Query: 158 TCASSSPALPGTDGVLRRMSP-----VCPPSPVVLACLVSSPHVPASLTPPPTRGS---- 208
S+P LP L R +P + PP P + + S P PP+RG+
Sbjct: 268 PTNESAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDPPSRGAAPPP 327
Query: 209 --PEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTTPSLSPAG 259
P I ++ +P R +H S PS P PS +PAG
Sbjct: 328 PPPVIRNGARDAPPPPPPYR------MHGSEPPSRGKPP-----PPPSRTPAG 369
Score = 34.3 bits (77), Expect = 0.12
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 15/116 (12%)
Query: 54 AEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVG--SGRPAGLA----ARAAAA 107
+ P E+ +P ++ R G+ P P A S RP A +R AA
Sbjct: 266 SSPTNESAPELPQRHNSLHRKTPGPVRGLAPPPPTSASPSLLSNRPPPPARDPPSRGAAP 325
Query: 108 AP-----RSLRKPSPSPSPSLRRRRA----RNSPGIRPSPSPSPSPSPSPSPARGG 154
P R+ + +P P P R + R P PS +P+ P P P P R G
Sbjct: 326 PPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPPPPPPLRNG 381
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 52.4 bits (124), Expect = 4e-07
Identities = 52/194 (26%), Positives = 66/194 (34%), Gaps = 15/194 (7%)
Query: 34 PSPCAGRGLEALGRDWRGTVAEPRPEAQGRV----PSFRSNARRVRSVRGGGVTAPA--- 86
P+ AG G A G EP P + R P R + G PA
Sbjct: 67 PAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKL 126
Query: 87 --PPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSP 144
PP+ GS P AA AA + P+ P+ RA PG P P P P P
Sbjct: 127 RPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGP 186
Query: 145 ----SPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCP-PSPVVLACLVSS-PHVPA 198
P + G S A P V + + P P P ++ + P V A
Sbjct: 187 GKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGA 246
Query: 199 SLTPPPTRGSPEIA 212
+ P P SP A
Sbjct: 247 AAPPAPAAPSPPAA 260
Score = 44.3 bits (103), Expect = 1e-04
Identities = 53/186 (28%), Positives = 70/186 (37%), Gaps = 24/186 (12%)
Query: 82 VTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPS 141
V A APP A PA A A AAAP P P P+P+ R + G P+ +
Sbjct: 244 VGAAAPP-APAAPSPPAAPAPAAPAAAP-----PPPPPAPATLARPPGHPAG---PPTAA 294
Query: 142 PSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSP---VCPPSPVVLACLVSSPHVPA 198
P+ P + GG + +PA G GV + P P+P V A SP
Sbjct: 295 PAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKA---ESPKRVV 351
Query: 199 SLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTTPSLSPA 258
PP + S + + QG L S P+ P PA TP+ P
Sbjct: 352 QAAPPAAQTLAASGPASTAASMVIGPTMQGALPS------PAAVPPPAP---GTPTGLPK 402
Query: 259 GWVGGI 264
G G +
Sbjct: 403 GAAGAV 408
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/131 (29%), Positives = 46/131 (35%), Gaps = 15/131 (11%)
Query: 92 VGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPA 151
V SG PAG A AA +P P P+ R R P RP P PSP
Sbjct: 62 VVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQ-RPGP-----PSPRRPLV 115
Query: 152 RGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPEI 211
G A P G+ G C P P A V++ PA P G +
Sbjct: 116 PAGPAPPAAKLRPPPEGSAG-------SCAPVPA--AAAVAAGPEPAPAGPAKPAGPAAL 166
Query: 212 AENSKRSPGTG 222
A + PG G
Sbjct: 167 AARAGPGPGPG 177
Score = 37.7 bits (86), Expect = 0.011
Identities = 49/191 (25%), Positives = 73/191 (38%), Gaps = 19/191 (9%)
Query: 84 APAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPS--PS 141
A AP + V +G PA L AAP ++ + P + A SP P+P+ +
Sbjct: 210 AAAPAVSLVNNG-PAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAA 268
Query: 142 PSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLT 201
P P P+PA R PA P T +P PP A + A+
Sbjct: 269 APPPPPPAPATLAR----PPGHPAGPPT------AAPAVPPP----AAAQNGGSAGAAPA 314
Query: 202 PPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTT-PSLSPAGW 260
P P G P + + PG + +++ P + P AQT + P+ + A
Sbjct: 315 PAPAAGGP-AGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASM 373
Query: 261 VGGIPLCRWLP 271
V G + LP
Sbjct: 374 VIGPTMQGALP 384
Score = 34.3 bits (77), Expect = 0.12
Identities = 44/173 (25%), Positives = 67/173 (38%), Gaps = 42/173 (24%)
Query: 79 GGGVTAPAPPDAEVGSGRPAGLAAR----AAAAAPRSLRKPSPSPSPSLRRRRARNSPGI 134
G APAP A +G PAG++ + AAAAAP +PG+
Sbjct: 307 GSAGAAPAPAPA---AGGPAGVSGQPGPGAAAAAP---------------------APGV 342
Query: 135 RPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSP 194
+ + SP +P A+ T A+S PA V+ PSP + P
Sbjct: 343 K-AESPKRVVQAAPPAAQ-----TLAASGPASTAASMVIGPTMQGALPSPAAV-----PP 391
Query: 195 HVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQ 247
P + T P + + ++ R+P + G +L P++L P P Q
Sbjct: 392 PAPGTPTGLPKGAAGAVTQSLSRTP---TATTSGIRATLTPTVLAPRLPQPPQ 441
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 52.4 bits (124), Expect = 4e-07
Identities = 46/191 (24%), Positives = 70/191 (36%), Gaps = 23/191 (12%)
Query: 84 APAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPS 143
AP PP P+ A A SL P L + + PG+ + +P+ S
Sbjct: 1487 APGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACS 1546
Query: 144 P--------------SPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLAC 189
P +P+P+PA+ +S+S AL ++P+ P +LA
Sbjct: 1547 PVLVPASALASPFPSAPNPAPAQASLLAPASSASQAL------ATPLAPMAAPQTAILAP 1600
Query: 190 LVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQG---RLRSLHPSLLPSLHPDPA 246
+ P P + P +P +A + P S G S P+ P L P
Sbjct: 1601 SPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSST 1660
Query: 247 QTFVTTPSLSP 257
QT + P SP
Sbjct: 1661 QTMLPAPVPSP 1671
Score = 45.4 bits (106), Expect = 5e-05
Identities = 54/194 (27%), Positives = 77/194 (39%), Gaps = 41/194 (21%)
Query: 83 TAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKP-----SPSPSPSLRRRRARNSPGIRPS 137
+AP P A+ PA A++A A + P +PSP+P L +
Sbjct: 1561 SAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPSPAPPL-------------A 1607
Query: 138 PSPSPSPSPSPSPARGGRWTTCASSSP-ALPGTDGVLRRMSPVCPPSPVV----LACLVS 192
P P +PSP +P T +P + PGT L SPV P+PV+ ++
Sbjct: 1608 PLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTS--LASASPVPAPTPVLAPSSTQTMLP 1665
Query: 193 SPHVPASLTPP-------------PTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLP 239
+P VP+ L P PT G + + S GTG ++L +
Sbjct: 1666 AP-VPSPLPSPASTQTLALAPALAPTLGGS--SPSQTLSLGTGNPQGPFPTQTLSLTPAS 1722
Query: 240 SLHPDPAQTFVTTP 253
SL P PAQT P
Sbjct: 1723 SLVPTPAQTLSLAP 1736
Score = 44.3 bits (103), Expect = 1e-04
Identities = 51/185 (27%), Positives = 73/185 (39%), Gaps = 26/185 (14%)
Query: 82 VTAPAPPDAEVGSGRPAGLAARAAAAAP-RSLRKPSPSPSPSLRRRRARNSPGIRPSPS- 139
V AP+P A V + + A ++ P SL SP P+P+ P + PS +
Sbjct: 1611 VLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPT---------PVLAPSSTQ 1661
Query: 140 ---PSPSPSPSPSPARGGRWTTCASSSPALPGTD-GVLRRMSPVCPPSPVVLACLVSSPH 195
P+P PSP PSPA + +P L G+ + P P L +P
Sbjct: 1662 TMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTP- 1720
Query: 196 VPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPS--LHPDPAQTFVTTP 253
+SL P P A+ +PG Q + P L P+ + P PA T P
Sbjct: 1721 -ASSLVPTP-------AQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAP 1772
Query: 254 SLSPA 258
+ S A
Sbjct: 1773 ASSSA 1777
Score = 40.4 bits (93), Expect = 0.002
Identities = 46/172 (26%), Positives = 59/172 (34%), Gaps = 23/172 (13%)
Query: 100 LAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTC 159
++A A AAP ++ P PS + PG SP P P+ SP SP
Sbjct: 1385 VSASAPGAAPLTISSPLHVPS---------SLPGPASSPMPIPNSSPLASPVSSTVSVPL 1435
Query: 160 ASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPP-----PTRGSPEIAEN 214
+SS P T +P+ P L S P + S+TPP P P
Sbjct: 1436 SSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGPPSLAP 1495
Query: 215 SKRSPGTG--------KKSRQGRLRSLHPSLL-PSLHPDPAQTFVTTPSLSP 257
S SP S HP LL P+ P P+ SP
Sbjct: 1496 SGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPACSP 1547
Score = 39.7 bits (91), Expect = 0.003
Identities = 45/167 (26%), Positives = 65/167 (38%), Gaps = 19/167 (11%)
Query: 99 GLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTT 158
G+ APR P P +P+ R + + P P+ +P P+P T
Sbjct: 1307 GVVKIVVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTP---------T 1357
Query: 159 CASSSPALPGTDGVLRRMSPVCPPSPVVLA-------CLVSSP-HVPASLTPPPTRGSPE 210
++ +P V + V PSP V A +SSP HVP+SL P + SP
Sbjct: 1358 LGTARAPMPTPTLVRPLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGPAS--SPM 1415
Query: 211 IAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTTPSLSP 257
NS + L S P +P+ P PA +T P +P
Sbjct: 1416 PIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAP 1462
Score = 37.4 bits (85), Expect = 0.015
Identities = 42/146 (28%), Positives = 56/146 (38%), Gaps = 33/146 (22%)
Query: 85 PAPPDAEVGSGRPAGLAARAAAAAPRSLRKPS--------PSPSPSLRRRRARNSPGIRP 136
P P A + PA + +A P S P PSP P + +SP P
Sbjct: 2443 PRPTPASAPAAIPALVPVPVSAPVPISAPNPITILPVHILPSPPPPSQIPPC-SSPACTP 2501
Query: 137 SPSPSPSPSPSPSPARGGRWTTC--ASSSPALPGTDGV------------LRRMSPVC-- 180
P+ +P P+ +P PA+ TC SSP L G V LR + +C
Sbjct: 2502 PPACTPPPAHTPPPAQ-----TCLVTPSSPLLLGPPSVPISASVTNLPLGLRPEAELCAQ 2556
Query: 181 ---PPSPVVLACLVSSPHVPASLTPP 203
P + LA + SS SL PP
Sbjct: 2557 ALASPESLELASVASSETSSLSLVPP 2582
Score = 33.1 bits (74), Expect = 0.27
Identities = 40/164 (24%), Positives = 61/164 (37%), Gaps = 34/164 (20%)
Query: 96 RPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPS----PSPSPSPSPSPA 151
RP + A + + +P S + R+ +P R SP+ P P+P P P+PA
Sbjct: 2390 RPGTRVSERLRGARAETQGANHTPVISAHQTRSTTTPP-RCSPARERVPRPAPRPRPTPA 2448
Query: 152 RGGRWTTCASSSPALPGTDGV-LRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPE 210
S+ A+P V + P+ P+P+ + + P P PP SP
Sbjct: 2449 ---------SAPAAIPALVPVPVSAPVPISAPNPITILPVHILPSPPPPSQIPPC-SSPA 2498
Query: 211 IAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTTPS 254
+P P+ P PAQT + TPS
Sbjct: 2499 CTPPPACTPP------------------PAHTPPPAQTCLVTPS 2524
Score = 32.7 bits (73), Expect = 0.36
Identities = 46/181 (25%), Positives = 62/181 (34%), Gaps = 31/181 (17%)
Query: 63 RVPSFRSNARRVRSVRGGG--VTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPS 120
R+ R A +R + GG V A D ++ P GL L P S +
Sbjct: 3065 RLARLRLEAEGMRGRKSGGSMVVAVIQDDLDLADSGPGGL----------ELTPPVVSLT 3114
Query: 121 PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVC 180
P LR R R + P + + +P G PG L + +
Sbjct: 3115 PKLRSTRLRPGSLVPPLETEKLPRKRAGAPVGGS------------PG----LAKRGRLQ 3158
Query: 181 PPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPS 240
PPSP+ V AS G+P +R GT + QG R L S PS
Sbjct: 3159 PPSPLGPEGSVEESEAEASGEEEEGDGTPRRRPGPRRLVGT---TNQGDQRILRSSAPPS 3215
Query: 241 L 241
L
Sbjct: 3216 L 3216
Score = 31.2 bits (69), Expect = 1.0
Identities = 45/183 (24%), Positives = 65/183 (35%), Gaps = 50/183 (27%)
Query: 134 IRPSPSPSP-----SPSPSPSPARGGRWTTCASSS--PALPGTDGVLR---RMSP---VC 180
+ P+P P+P S +PS +PA G A++ P + GV++ R +P +
Sbjct: 1263 VAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVRQAPRDGLT 1322
Query: 181 PPSPVVLACLVSSPHVPASLTPPPT--------------------------------RGS 208
P P+ A S +PA L P PT S
Sbjct: 1323 PVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTLVRPLLKLVHSPS 1382
Query: 209 PEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTTPSLSPAGWVGGIPLCR 268
PE+ S +PG + L PS LP P ++P SP +PL
Sbjct: 1383 PEV---SASAPGAAPLTISSPLHV--PSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSS 1437
Query: 269 WLP 271
LP
Sbjct: 1438 SLP 1440
Score = 30.0 bits (66), Expect = 2.3
Identities = 49/199 (24%), Positives = 66/199 (33%), Gaps = 54/199 (27%)
Query: 57 RPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPS 116
R EA +P R + R + V TAP PP RP + + R
Sbjct: 957 RYEADTFLPRHRLSRRVLLEV----ATAPDPPP------RPKPVKMKVN-------RMLQ 999
Query: 117 PSPSPSLRRRRARNSPG-------IRPSPSPSPSPSPSPSPA-RGGRWTTCASSSPALPG 168
P P R N+P +RP P P S P+P P + + S+SPA P
Sbjct: 1000 PVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPELSAQPTPGPVPQVLPASLMVSASPAGPP 1059
Query: 169 TDGVLRRMSPVC---------------------------PPSPVVLACLVSSPHVPASLT 201
R PV PP+P + L +P P L+
Sbjct: 1060 LIPASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPPTPTL--SLKPTPPAPVRLS 1117
Query: 202 PPPTRGSPEIAENSKRSPG 220
P P GS + + PG
Sbjct: 1118 PAPPPGSSSLLKPLTVPPG 1136
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 52.0 bits (123), Expect = 6e-07
Identities = 59/227 (25%), Positives = 89/227 (39%), Gaps = 26/227 (11%)
Query: 50 RGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGVT-----APAPPDAEVGS--GRPAGLAA 102
+G A P P+ P A S +GG T AP PP A S G PA +
Sbjct: 928 KGIPASPSPKGAPTPP-----AATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSP 982
Query: 103 RAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASS 162
+ A P + PSP P+ + +P PSP SP+ +P P G T A++
Sbjct: 983 KGAPTPPAAT-PPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPK--GASTPPAAT 1039
Query: 163 SPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTG 222
P+ G+ +P+ +P A + SP P +G+P + SP G
Sbjct: 1040 PPSPKGSPAA----TPLPKGAPTTPAATLPSP--KGGPATPSLKGAPTPPAATPPSPKGG 1093
Query: 223 KKSRQGRLRSLHPSLLP-----SLHPDPAQTFVTTPSLSPAGWVGGI 264
+ + + P+ P L P + TTP+ +P GG+
Sbjct: 1094 PATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGL 1140
Score = 48.9 bits (115), Expect = 5e-06
Identities = 65/246 (26%), Positives = 92/246 (37%), Gaps = 48/246 (19%)
Query: 50 RGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGVT-----APAPPDAEVGSGRPAGLAARA 104
+G +A P P+ P A S +GG T AP P A S + GLA +
Sbjct: 1160 KGGLATPPPKGAPTTP-----AATPPSPKGGLATPSPKGAPTTPAATPPSPK-GGLATPS 1213
Query: 105 AAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSP 164
AP + PSP L + +P + PSP P+ P +G T A++ P
Sbjct: 1214 PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAP-TPPAATPP 1272
Query: 165 ALPG-----------TDGVLRRMSP-----VCPP--SPVVLACLVSSPH----------- 195
+L G V+ SP PP +P A SP
Sbjct: 1273 SLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGA 1332
Query: 196 -VPASLTPPPTRGSPEIAENSKRSPG--TGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTT 252
P ++TPP +G+P + + S G T S++G P+ PS PA T +
Sbjct: 1333 PTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEG---PTPPAATPSHKGGPAMT-PPS 1388
Query: 253 PSLSPA 258
P PA
Sbjct: 1389 PKRGPA 1394
Score = 44.3 bits (103), Expect = 1e-04
Identities = 55/224 (24%), Positives = 78/224 (34%), Gaps = 25/224 (11%)
Query: 56 PRPEAQGRVPSFRSN----ARRVRSVRGGGVT-----APAPPDAEVGSGRPAGLAARAAA 106
P P+ PS + A S +GG T AP PP A S + GLA
Sbjct: 1065 PSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPK-GGLATPPHK 1123
Query: 107 AAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPAL 166
AP + PSP L + +P + PSP + P +G T A+
Sbjct: 1124 GAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATP---- 1179
Query: 167 PGTDGVLRRMSPV-CPPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKS 225
P G L SP P +P + P L P +G+P + SP G +
Sbjct: 1180 PSPKGGLATPSPKGAPTTPA-----ATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT 1234
Query: 226 RQGRLRSLHPSLLP-----SLHPDPAQTFVTTPSLSPAGWVGGI 264
+ P+ P P + T P+ +P GG+
Sbjct: 1235 PSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGL 1278
Score = 44.3 bits (103), Expect = 1e-04
Identities = 60/222 (27%), Positives = 81/222 (36%), Gaps = 46/222 (20%)
Query: 50 RGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGVT-----APAPPDAEVGSGRPAGLAARA 104
+G +A P P+ P A S +GG T AP PP A S + GLA
Sbjct: 1229 KGGLATPSPKGAPTTP-----AATPPSPKGGPATPPPKGAPTPPAATPPSLK-GGLATPP 1282
Query: 105 AAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSP 164
AP PSP + +P + PSP SP P +G A + P
Sbjct: 1283 HKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKG------APTPP 1336
Query: 165 ALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSK-RSPGTGK 223
A V PPSP +P +PA T P ++G P + + +P
Sbjct: 1337 A-------------VTPPSP------KGTPTLPA--TTPSSKGGPTTPSSKEGPTPPAAT 1375
Query: 224 KSRQGRLRSLHPS-----LLPSLHPDPAQTFV--TTPSLSPA 258
S +G PS +PS DP V +P +PA
Sbjct: 1376 PSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPA 1417
Score = 43.5 bits (101), Expect = 2e-04
Identities = 58/254 (22%), Positives = 88/254 (34%), Gaps = 51/254 (20%)
Query: 54 AEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLR 113
A P P +P+ ++ + P P A + S + A A P ++
Sbjct: 1495 ATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMT 1554
Query: 114 KPSPSPSPSL----------RRRRARNSPGIRPSP---SPSP----------SPSPSPSP 150
PSP +P++ + A + P + PS +PSP SPSP +P
Sbjct: 1555 VPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAP 1614
Query: 151 ARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLT-------PP 203
PA P G +P P PV + L SP PAS+T P
Sbjct: 1615 TPPAVTPPSPEKGPATPAPKG-----TPTSP--PVTPSSLKDSPTSPASVTCKMGATVPQ 1667
Query: 204 PTRGSPE-----------IAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTT 252
++G P +A + +P +R+G + P + PDP+
Sbjct: 1668 ASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPS---AKN 1724
Query: 253 PSLSPAGWVGGIPL 266
S P V PL
Sbjct: 1725 GSKGPLSTVAPAPL 1738
Score = 41.6 bits (96), Expect = 8e-04
Identities = 51/225 (22%), Positives = 82/225 (36%), Gaps = 24/225 (10%)
Query: 56 PRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRK- 114
P P+ +PS + + + APA P G+ P+ A P SL+K
Sbjct: 1387 PSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKA 1446
Query: 115 ---PSPSPSPSLRRRRARNS-PGIRPSPSPSPSPSP-----SPSPARGGRWTTCASSSPA 165
+P P+ + + P + P PSP P+P S SP + T +P
Sbjct: 1447 PATSAPKGGPATPSSKGDPTLPAVTP-PSPKEPPAPKQVATSSSPKKAPA-TPAPMGAPT 1504
Query: 166 LPGTDGVLRRMSPVCPPS---PVVLACLVSSPHVPASLTPPPTRGSPEIAENSKR----- 217
LP + P P S P+ + S PA+L P P + S +
Sbjct: 1505 LPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAI 1564
Query: 218 -SPGTGKKSRQGRLRSLHPSLLPSLH---PDPAQTFVTTPSLSPA 258
+P + + S P++ PS + P P + + SP+
Sbjct: 1565 PTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPS 1609
Score = 40.0 bits (92), Expect = 0.002
Identities = 49/195 (25%), Positives = 68/195 (34%), Gaps = 30/195 (15%)
Query: 88 PDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSP- 146
P + G PA A A + S +K +P+P GI SPSP +P+P
Sbjct: 894 PFPKEGPATPAPKQAPALSMTSSSPKKARATPAPK----------GIPASPSPKGAPTPP 943
Query: 147 --SPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPP 204
+P +GG T +P P + P PSP P + TPP
Sbjct: 944 AATPPSPKGGPATPSPKWAPTPPAATPPSPKGGP-ATPSP-------KGAPTPPAATPPS 995
Query: 205 TRGSPEI--AENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTTPSLSPAGWVG 262
+G P + + P S +G P+ P P A T SP G
Sbjct: 996 PKGGPATPSPKGAPTPPAVTPPSPKG-----SPAATP--FPKGASTPPAATPPSPKGSPA 1048
Query: 263 GIPLCRWLPEAGQAS 277
PL + P A+
Sbjct: 1049 ATPLPKGAPTTPAAT 1063
Score = 37.0 bits (84), Expect = 0.019
Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 7/135 (5%)
Query: 80 GGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSP-----SPSPSLRRRRARNSPGI 134
G +++P P E L+ + + +P + P+P +P+PS + +
Sbjct: 822 GNLSSPVSP-VEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTL 880
Query: 135 RPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSP 194
P +P+PS P P G T +PAL T ++ P + +
Sbjct: 881 PPKETPTPSVVNLPFPKEGPA-TPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGA 939
Query: 195 HVPASLTPPPTRGSP 209
P + TPP +G P
Sbjct: 940 PTPPAATPPSPKGGP 954
Score = 36.2 bits (82), Expect = 0.032
Identities = 47/163 (28%), Positives = 61/163 (37%), Gaps = 27/163 (16%)
Query: 98 AGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSP-SPSPSPSPSPARGGRW 156
+ L+ AA P P SP+P A N PSPS + +P P P
Sbjct: 30 SALSVTAALGQPGPTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTPLEVPFPQ----- 84
Query: 157 TTCASSSPALP-GTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENS 215
+SS ALP GT P +P L L+ P PA+L SP IA
Sbjct: 85 ---SSSGTALPLGT----------APEAPTFLPNLIGPPISPAAL----ALASPMIAPTL 127
Query: 216 KRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTTPSLSPA 258
K GT S L +L P + P + PS++ A
Sbjct: 128 K---GTPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVA 167
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 51.6 bits (122), Expect = 7e-07
Identities = 69/265 (26%), Positives = 87/265 (32%), Gaps = 49/265 (18%)
Query: 34 PSPCAGRGLEALGRDWR----GTVAEPRPEAQGRVPSFRSN----------ARRVRSVRG 79
PSP R A G + A PRP +G S S A R R G
Sbjct: 163 PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAG 222
Query: 80 GGVTAPAPPDAE-----VGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRR------- 127
GG+ PA + S +G +AR AP +P P +LR +
Sbjct: 223 GGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKD 282
Query: 128 -------------ARNSPGIRPSPSPSPSPSPSPS-PARGGRWTTCASSSPALPGTDGVL 173
A SP PSPS PS PS PA T + SP L T L
Sbjct: 283 AAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFL 342
Query: 174 RRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSL 233
PSP + P P +L PP + P + SP + ++
Sbjct: 343 --------PSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAV 394
Query: 234 HPSLLP-SLHPDPAQTFVTTPSLSP 257
H P S P P +P SP
Sbjct: 395 HLLQAPFSPPPSPPVQAPFSPPASP 419
Score = 42.0 bits (97), Expect = 6e-04
Identities = 62/228 (27%), Positives = 89/228 (39%), Gaps = 37/228 (16%)
Query: 51 GTVAEPRPEAQGR----VPSFRSNARRVRSV-RGGGVTAPAP---------PDAEVGSGR 96
G RP A GR P+ ++ V S R G T P P + V G+
Sbjct: 78 GPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGK 137
Query: 97 PAGLAARAA--AAAPRSLRKPSP-SPSPSLRRRR--ARNSPGIRPSPSPSPSPSPSPSPA 151
R+A A A R P+P +PSP++ RR A G+ P P+PS P P P
Sbjct: 138 ATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGL---PRPAPSARPRP-PT 193
Query: 152 RGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTP--PPTRGSP 209
G R + ++S + RR PS +S + +S TP P R P
Sbjct: 194 EGPRKSVSSASEHSTTEPSPAARRR-----PSAGGGLQRPASRSLSSSATPLSSPARSGP 248
Query: 210 EIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTTPSLSP 257
A + R+P + + L++L P + D A P+L P
Sbjct: 249 S-ARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAA------PALGP 289
Score = 40.8 bits (94), Expect = 0.001
Identities = 41/161 (25%), Positives = 55/161 (34%), Gaps = 19/161 (11%)
Query: 85 PAPPDAEV--GSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRR--------------RRA 128
P+PP + S P A AA P L KP P P+L +A
Sbjct: 444 PSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQA 503
Query: 129 RNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSP---VCPPSPV 185
SP SP +P P P S PA P R +P P
Sbjct: 504 PFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPR 563
Query: 186 VLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSR 226
+ L P P S +P T P++A +S + T ++ R
Sbjct: 564 LTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELR 604
Score = 39.7 bits (91), Expect = 0.003
Identities = 66/282 (23%), Positives = 95/282 (33%), Gaps = 60/282 (21%)
Query: 36 PCAGRGLEALGRDWRGTVAEPR-------PEAQG--RVPSFRSNARR--VRSVRGGGVTA 84
P AG GL+ + A P P A+G R P+ S + ++++R VT
Sbjct: 219 PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTP 278
Query: 85 P----APPDAEVGSG---RPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIR-- 135
P AP + S P+ A + +A P PSP +P + + SP ++
Sbjct: 279 PRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQAT 338
Query: 136 ----PSPSPSPSPSPSP---------------SPARGGRWTTCASSSPALPGTDGVLRRM 176
PSP SP +P P SP + A+ SP P V
Sbjct: 339 HSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQ 398
Query: 177 SPVCPP-------------SPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGK 223
+P PP SP V P SL PP + P + SP
Sbjct: 399 APFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATP 458
Query: 224 KSRQG--------RLRSLHPSLLPSLHPDPAQTFVTTPSLSP 257
+ +L P P+L P Q + P+ P
Sbjct: 459 PPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFP 500
Score = 39.3 bits (90), Expect = 0.004
Identities = 39/138 (28%), Positives = 50/138 (36%), Gaps = 18/138 (13%)
Query: 107 AAPRSLRKPSPSPSPSLRRRRARNSPG-------------IRPSPSPSPSPSPSPS---P 150
AAP PSP SP+L+ R +PG + P P P PS SPS + P
Sbjct: 528 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGP 587
Query: 151 ARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPE 210
G ++ S+ L G D + PP LA + P RG+P
Sbjct: 588 DLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAP- 646
Query: 211 IAENSKRSPGTGKKSRQG 228
P TG S G
Sbjct: 647 -GAPLPWPPATGPGSADG 663
Score = 36.2 bits (82), Expect = 0.032
Identities = 48/198 (24%), Positives = 65/198 (32%), Gaps = 42/198 (21%)
Query: 71 ARRVRSVRGGGVTAPAPPDAEVGSGRP--------------AG------LAARAAAAAPR 110
A R + R G+ P PP GS RP AG LA RA
Sbjct: 13 AARTPAARAPGLLTPRPP----GSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGA 68
Query: 111 SLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWT---TCASSSPALP 167
++ + +P P+ R + G R P+ + SP P SP R T +
Sbjct: 69 TIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRIS 128
Query: 168 GTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQ 227
+ V R + P + A T PT G+P SP ++SR
Sbjct: 129 AEETVARGKATEAPKRSALSAGARRD-------TSGPTPGTP--------SPAMARRSRA 173
Query: 228 GRLRSLHPSLLPSLHPDP 245
P PS P P
Sbjct: 174 AGTEVGLPRPAPSARPRP 191
Score = 35.0 bits (79), Expect = 0.072
Identities = 36/123 (29%), Positives = 44/123 (35%), Gaps = 16/123 (13%)
Query: 58 PEAQGRVPSFRSNARRVRSVRGG---GVTAPAPPDAEVGSGRPAG--------LAARAAA 106
P+ G S S +R G G A PPDAE+ + PA LA R A
Sbjct: 587 PDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAP 646
Query: 107 AAPRSLRKPS-PSPSPSLRRRRARNSP-GIRPSP---SPSPSPSPSPSPARGGRWTTCAS 161
AP + P + L P P+P P PSP S A G +S
Sbjct: 647 GAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASS 706
Query: 162 SSP 164
SP
Sbjct: 707 RSP 709
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 51.2 bits (121), Expect = 1e-06
Identities = 68/247 (27%), Positives = 92/247 (37%), Gaps = 31/247 (12%)
Query: 34 PSPCAGRGLEALGRDWRGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVG 93
P P +GL + TVA + + + + ARR S G +PA
Sbjct: 126 PGPLGQKGLRISAEE---TVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRA 182
Query: 94 SGRPAGLAARAAAAAPR------------SLRKPSPSPSPSLRRRRARNSPGIRP-SPSP 140
+G GL A +A PR + + PSP+ RRR + RP S S
Sbjct: 183 AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSL 242
Query: 141 SPSPSPSPSPARGG---RWTTCASSSPALPGTDGVLRRMSP-VCPPSPVVLACLVSSPHV 196
S S +P SPAR G R T A + P+ P G+ P V PP L
Sbjct: 243 SSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPAL-----G 297
Query: 197 PASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPA-----QTFVT 251
P S +P T SP A S+ P L + LP P P+ QT +
Sbjct: 298 PLSSSPLAT-PSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPS 356
Query: 252 TPSLSPA 258
P+ P+
Sbjct: 357 PPATPPS 363
Score = 45.8 bits (107), Expect = 4e-05
Identities = 65/239 (27%), Positives = 91/239 (38%), Gaps = 25/239 (10%)
Query: 36 PCAGRGLEALGRDWRGTVAEPR-------PEAQG--RVPSFRSNARR--VRSVRGGGVTA 84
P AG GL+ + A P P A+G R P+ S + ++++R VT
Sbjct: 228 PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTP 287
Query: 85 PAPPDAE-VGSGRPAGLAARAAAAAPRSLRKPSPSPSP---SLRRRRARNSPGIRPSPSP 140
P A +G + LA + +AA +S P+ +P SL + A P PSPS
Sbjct: 288 PRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSA 347
Query: 141 SPSPSPSPS-PARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPAS 199
PS PS PA T + SP L T L PSP + P P +
Sbjct: 348 PPSLQTLPSPPATPPSQATTSLGSPTLQATHSFL--------PSPPLSPLATPPPQAPPA 399
Query: 200 LTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLP-SLHPDPAQTFVTTPSLSP 257
L PP + P + SP + ++H P S P P +P SP
Sbjct: 400 LALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASP 458
Score = 42.4 bits (98), Expect = 5e-04
Identities = 52/190 (27%), Positives = 72/190 (37%), Gaps = 37/190 (19%)
Query: 83 TAPAPPDAEVGS---GRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIR---- 135
T PA P + + P LA + +A P PSP +P + + SP ++
Sbjct: 320 TLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHS 379
Query: 136 --PSPSPSPSPSP---------------SPSPARGGRWTTCASSSPALPGTDGVLRRMSP 178
PSP SP +P PSP + A+ SP P V +P
Sbjct: 380 FLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAP 439
Query: 179 VC-PPSPVVLACL--VSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHP 235
PPSP V A +SP V S T PP++ P +A + P + S P
Sbjct: 440 FSPPPSPPVQAPFSPPASPPVSPSAT-PPSQAPPSLAAPPLQVPPSPPAS---------P 489
Query: 236 SLLPSLHPDP 245
+ PS P P
Sbjct: 490 PMSPSATPPP 499
Score = 41.6 bits (96), Expect = 8e-04
Identities = 66/242 (27%), Positives = 94/242 (38%), Gaps = 40/242 (16%)
Query: 57 RPEAQGR----VPSFRSNARRVRSV-RGGGVTAPAP---------PDAEVGSGRPAGLAA 102
RP A GR P+ ++ V S R G T P P + V G+
Sbjct: 93 RPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPK 152
Query: 103 RAA--AAAPRSLRKPSP-SPSPSLRRRR--ARNSPGIRPSPSPSPSPSPSPSPARGGRWT 157
R+A A A R P+P +PSP++ RR A G+ P P+PS P P P G R +
Sbjct: 153 RSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGL---PRPAPSARPRP-PTEGPRKS 208
Query: 158 TCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTP--PPTRGSPEIAENS 215
++S + RR PS +S + +S TP P R P A +
Sbjct: 209 VSSASEHSTTEPSPAARRR-----PSAGGGLQRPASRSLSSSATPLSSPARSGPS-ARGT 262
Query: 216 KRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTTPSLSPAGWVGGIPLCRWLPEAGQ 275
R+P + + L++L P + D A P+L P + PL P A
Sbjct: 263 PRAPAHPSQPKPKGLQALRPPQVTPPRKDAA------PALGP---LSSSPLATPSPSAAL 313
Query: 276 AS 277
S
Sbjct: 314 QS 315
Score = 39.3 bits (90), Expect = 0.004
Identities = 39/138 (28%), Positives = 50/138 (36%), Gaps = 18/138 (13%)
Query: 107 AAPRSLRKPSPSPSPSLRRRRARNSPG-------------IRPSPSPSPSPSPSPS---P 150
AAP PSP SP+L+ R +PG + P P P PS SPS + P
Sbjct: 567 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGP 626
Query: 151 ARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPE 210
G ++ S+ L G D + PP LA + P RG+P
Sbjct: 627 DLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAP- 685
Query: 211 IAENSKRSPGTGKKSRQG 228
P TG S G
Sbjct: 686 -GAPLPWPPATGPGSADG 702
Score = 38.1 bits (87), Expect = 0.009
Identities = 50/181 (27%), Positives = 68/181 (37%), Gaps = 40/181 (22%)
Query: 85 PAPPDAEV--GSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSP 142
P+PP + S P A AA P L KP P P+L +P ++ PSP P
Sbjct: 483 PSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALA------TPPLQALPSP-P 535
Query: 143 SPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTP 202
+ P +P S S +LP MSP+ P P L + P P
Sbjct: 536 ASFPGQAPF---------SPSASLP--------MSPLATPPPQAPPVLAA----PLLQVP 574
Query: 203 PPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTTPSLSPAGWVG 262
P SP + + +R P G + P L +L P P PS SP+ +
Sbjct: 575 PSPPASPTL-QAPRRPPTPGPDTSVS-----GPRLTLALAPGPP----PPPSRSPSSTLS 624
Query: 263 G 263
G
Sbjct: 625 G 625
Score = 35.0 bits (79), Expect = 0.072
Identities = 36/123 (29%), Positives = 44/123 (35%), Gaps = 16/123 (13%)
Query: 58 PEAQGRVPSFRSNARRVRSVRGG---GVTAPAPPDAEVGSGRPAG--------LAARAAA 106
P+ G S S +R G G A PPDAE+ + PA LA R A
Sbjct: 626 PDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAP 685
Query: 107 AAPRSLRKPS-PSPSPSLRRRRARNSP-GIRPSP---SPSPSPSPSPSPARGGRWTTCAS 161
AP + P + L P P+P P PSP S A G +S
Sbjct: 686 GAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASS 745
Query: 162 SSP 164
SP
Sbjct: 746 RSP 748
Score = 30.4 bits (67), Expect = 1.8
Identities = 38/155 (24%), Positives = 57/155 (36%), Gaps = 27/155 (17%)
Query: 98 AGLAARAAAAAPRSLRKP----SPSPSPSL---------------RRRRARNSPGIRPSP 138
AG AAR AA L P SP P P + R+ A + GI +
Sbjct: 10 AGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 139 SPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPA 198
P +P P+ + G T + + + P G R P SP VSSP +
Sbjct: 70 IPESAPRAGPTRSAG----TSSRNPASRPPASGRGERAPPAKNTSPGP----VSSPGRAS 121
Query: 199 SLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSL 233
T P G + +++ + GK + + +L
Sbjct: 122 GTTRPGPLGQKGLRISAEETVARGKATEAPKRSAL 156
Score = 30.0 bits (66), Expect = 2.3
Identities = 40/176 (22%), Positives = 57/176 (32%), Gaps = 32/176 (18%)
Query: 72 RRVRSVRGGGVTAPAPPDA--EVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRAR 129
R+ + R GG+ P++ G R AG ++R +P+ P R R
Sbjct: 55 RKPLAERAGGIGGATIPESAPRAGPTRSAGTSSR------------NPASRPPASGRGER 102
Query: 130 NSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLAC 189
P SP P SP + R G + + V R + P + A
Sbjct: 103 APPAKNTSPGPVSSPGRASGTTRPG---PLGQKGLRISAEETVARGKATEAPKRSALSAG 159
Query: 190 LVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDP 245
T PT G+P SP ++SR P PS P P
Sbjct: 160 ARRD-------TSGPTPGTP--------SPAMARRSRAAGTEVGLPRPAPSARPRP 200
Score = 28.9 bits (63), Expect = 5.2
Identities = 37/130 (28%), Positives = 50/130 (38%), Gaps = 16/130 (12%)
Query: 85 PAPPDAEVGSGRPAGLAARAAAAAPRSLRKP-SPSPSPSLRRRRARN-SPGIRPSPSPS- 141
P+PP + S A A L+ P SP PSP ++ + SP + PS +P
Sbjct: 409 PSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPS 468
Query: 142 ---PS---------PSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLAC 189
PS PSP SP T + P L L + P PP+ +
Sbjct: 469 QAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPA-LATPP 527
Query: 190 LVSSPHVPAS 199
L + P PAS
Sbjct: 528 LQALPSPPAS 537
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 51.2 bits (121), Expect = 1e-06
Identities = 68/246 (27%), Positives = 97/246 (39%), Gaps = 26/246 (10%)
Query: 34 PSPCAGRGLEALGRDWRGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVG 93
P P +GL + TVA + + + + ARR S G +PA
Sbjct: 126 PGPLGQKGLRISAEE---TVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRA 182
Query: 94 SGRPAGLAARAAAAAPR------------SLRKPSPSPSPSLRRRRARNSPGIRP-SPSP 140
+G GL A +A PR + + PSP+ RRR + RP S S
Sbjct: 183 AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSL 242
Query: 141 SPSPSPSPSPARGG---RWTTCASSSPALPGTDGVLRRMSP-VCPP---SPVVLACLVSS 193
S S +P SPAR G R T A + P+ P G+ P V PP + L L SS
Sbjct: 243 SSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSS 302
Query: 194 PHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPA-QTFVTT 252
P A+ +P T+ P ++ +P L + P PS P+ QT +
Sbjct: 303 P--LATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSP 360
Query: 253 PSLSPA 258
P+ P+
Sbjct: 361 PATPPS 366
Score = 42.4 bits (98), Expect = 5e-04
Identities = 65/226 (28%), Positives = 81/226 (35%), Gaps = 28/226 (12%)
Query: 34 PSPCAGRGLEALGRDWRGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVG 93
PS +GL+AL V PR +A + S+ S G P PP
Sbjct: 269 PSQPKPKGLQALRPP---QVTPPRKDAAPALGPLSSSPLATPSP-SGTKARPVPPPDNAA 324
Query: 94 SGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARG 153
+ PA L A P L PSPS PSL + + P PS +P PS + P A
Sbjct: 325 TPLPATLPPSPPLATPLPLAPPSPSAPPSL--QTLPSPPATPPSQAP-PSMTTPPMQAPP 381
Query: 154 GRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPEIAE 213
T P L S PPSP+ L SS SL P + +
Sbjct: 382 SLQTIPPIQVP------HSLTSPSLQAPPSPLAL----SSLQATTSLGSPTLQATHSFLT 431
Query: 214 NSKRSPGTGKKSRQGRLRSLHPSLLPSLHPD--PAQTFVTTPSLSP 257
S R Q L S PS S PD P Q ++ P+ P
Sbjct: 432 MSPR-------QTQASLTS--PSRPASTPPDSPPLQAPLSLPASPP 468
Score = 41.6 bits (96), Expect = 8e-04
Identities = 49/191 (25%), Positives = 64/191 (33%), Gaps = 31/191 (16%)
Query: 85 PAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSP------ 138
P+PP + + + P A A P PSP SP L SP PSP
Sbjct: 607 PSPPLSPLATPPPQ---APPXLALPPLQAPPSPPASPPL-------SPLATPSPQAPNAL 656
Query: 139 ---------SPSPSP---SPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVV 186
SP PSP +P PA + S A P ++ P P SP +
Sbjct: 657 AVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPM 716
Query: 187 LACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPA 246
P P L PP + P + SP R L + P +P P P
Sbjct: 717 SPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVP---PSPP 773
Query: 247 QTFVTTPSLSP 257
+ +P P
Sbjct: 774 ASLPMSPLAKP 784
Score = 41.2 bits (95), Expect = 0.001
Identities = 61/222 (27%), Positives = 88/222 (39%), Gaps = 37/222 (16%)
Query: 57 RPEAQGR----VPSFRSNARRVRSV-RGGGVTAPAP---------PDAEVGSGRPAGLAA 102
RP A GR P+ ++ V S R G T P P + V G+
Sbjct: 93 RPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPK 152
Query: 103 RAA--AAAPRSLRKPSP-SPSPSLRRRR--ARNSPGIRPSPSPSPSPSPSPSPARGGRWT 157
R+A A A R P+P +PSP++ RR A G+ P P+PS P P P G R +
Sbjct: 153 RSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGL---PRPAPSARPRP-PTEGPRKS 208
Query: 158 TCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTP--PPTRGSPEIAENS 215
++S + RR PS +S + +S TP P R P A +
Sbjct: 209 VSSASEHSTTEPSPAARRR-----PSAGGGLQRPASRSLSSSATPLSSPARSGPS-ARGT 262
Query: 216 KRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTTPSLSP 257
R+P + + L++L P + D A P+L P
Sbjct: 263 PRAPAHPSQPKPKGLQALRPPQVTPPRKDAA------PALGP 298
Score = 41.2 bits (95), Expect = 0.001
Identities = 43/151 (28%), Positives = 58/151 (38%), Gaps = 24/151 (15%)
Query: 109 PRSLRKPSPSPSPSLRRRRARN--SPGIRPSPSPSPSPSPS---------PSPARGGRWT 157
P S+ P P P+L + SP + P +P P P PSP +
Sbjct: 584 PSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLS 643
Query: 158 TCASSSPALPGTDGVLRRMSPVC-PPSPVVLACL--VSSPHVPASLTPPPTRGSPEIAEN 214
A+ SP P V +P PPSP V A +SP V S T PP++ P +A
Sbjct: 644 PLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSAT-PPSQAPPSLAAP 702
Query: 215 SKRSPGTGKKSRQGRLRSLHPSLLPSLHPDP 245
+ P + S P + PS P P
Sbjct: 703 PLQVPPSPPAS---------PPMSPSATPPP 724
Score = 39.3 bits (90), Expect = 0.004
Identities = 39/138 (28%), Positives = 50/138 (36%), Gaps = 18/138 (13%)
Query: 107 AAPRSLRKPSPSPSPSLRRRRARNSPG-------------IRPSPSPSPSPSPSPS---P 150
AAP PSP SP+L+ R +PG + P P P PS SPS + P
Sbjct: 836 AAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGP 895
Query: 151 ARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPE 210
G ++ S+ L G D + PP LA + P RG+P
Sbjct: 896 DLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAP- 954
Query: 211 IAENSKRSPGTGKKSRQG 228
P TG S G
Sbjct: 955 -GAPLPWPPATGPGSADG 971
Score = 35.0 bits (79), Expect = 0.072
Identities = 39/173 (22%), Positives = 56/173 (32%), Gaps = 2/173 (1%)
Query: 87 PPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSP-S 145
P + + P+ A+ P PS +P P +P + P P+P P
Sbjct: 511 PLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQ 570
Query: 146 PSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPT 205
PSP T +S + P L PSP + P P L PP
Sbjct: 571 APPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPL 630
Query: 206 RGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLP-SLHPDPAQTFVTTPSLSP 257
+ P + SP + ++H P S P P +P SP
Sbjct: 631 QAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASP 683
Score = 35.0 bits (79), Expect = 0.072
Identities = 36/123 (29%), Positives = 44/123 (35%), Gaps = 16/123 (13%)
Query: 58 PEAQGRVPSFRSNARRVRSVRGG---GVTAPAPPDAEVGSGRPAG--------LAARAAA 106
P+ G S S +R G G A PPDAE+ + PA LA R A
Sbjct: 895 PDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAP 954
Query: 107 AAPRSLRKPS-PSPSPSLRRRRARNSP-GIRPSP---SPSPSPSPSPSPARGGRWTTCAS 161
AP + P + L P P+P P PSP S A G +S
Sbjct: 955 GAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASS 1014
Query: 162 SSP 164
SP
Sbjct: 1015 RSP 1017
Score = 30.4 bits (67), Expect = 1.8
Identities = 38/155 (24%), Positives = 57/155 (36%), Gaps = 27/155 (17%)
Query: 98 AGLAARAAAAAPRSLRKP----SPSPSPSL---------------RRRRARNSPGIRPSP 138
AG AAR AA L P SP P P + R+ A + GI +
Sbjct: 10 AGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGAT 69
Query: 139 SPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPA 198
P +P P+ + G T + + + P G R P SP VSSP +
Sbjct: 70 IPESAPRAGPTRSAG----TSSRNPASRPPASGRGERAPPAKNTSPGP----VSSPGRAS 121
Query: 199 SLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSL 233
T P G + +++ + GK + + +L
Sbjct: 122 GTTRPGPLGQKGLRISAEETVARGKATEAPKRSAL 156
Score = 30.0 bits (66), Expect = 2.3
Identities = 40/176 (22%), Positives = 57/176 (32%), Gaps = 32/176 (18%)
Query: 72 RRVRSVRGGGVTAPAPPDA--EVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRAR 129
R+ + R GG+ P++ G R AG ++R +P+ P R R
Sbjct: 55 RKPLAERAGGIGGATIPESAPRAGPTRSAGTSSR------------NPASRPPASGRGER 102
Query: 130 NSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLAC 189
P SP P SP + R G + + V R + P + A
Sbjct: 103 APPAKNTSPGPVSSPGRASGTTRPG---PLGQKGLRISAEETVARGKATEAPKRSALSAG 159
Query: 190 LVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDP 245
T PT G+P SP ++SR P PS P P
Sbjct: 160 ARRD-------TSGPTPGTP--------SPAMARRSRAAGTEVGLPRPAPSARPRP 200
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 51.2 bits (121), Expect = 1e-06
Identities = 55/177 (31%), Positives = 71/177 (40%), Gaps = 37/177 (20%)
Query: 85 PAPPDAEVGSGRPAGLAARAAAAA-----PRSLRKPSPSPSPSLRRRRARNSPGIRPSPS 139
PA P+A + R A L A A + S +PS P P+ P + P+PS
Sbjct: 112 PAHPEAPAAAARAAALVAHPGAGSYPCGGGSSGAQPSAPPPPA---------PPLPPTPS 162
Query: 140 PSPSPSPSPSPARGGRWTTCA---SSSPALPGTDGVLRR-MSPVCPPSPVVLACL----- 190
P P P P P PA G TT + SS D VLRR +S P + + A L
Sbjct: 163 PPPPPPPPPPPALSGYTTTNSGGGGSSGKGHSRDFVLRRDLSATAPAAAMHGAPLGGEQR 222
Query: 191 --VSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDP 245
SP PA PPP I+ + + G S P+L P+LH P
Sbjct: 223 SGTGSPQHPA---PPPHSAGMFISASGTYAGPDG---------SGGPALFPALHDTP 267
Score = 35.8 bits (81), Expect = 0.042
Identities = 36/124 (29%), Positives = 45/124 (36%), Gaps = 8/124 (6%)
Query: 87 PPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIR-PSPSPSPSPS 145
PP A G A AAAAA + + + + A PG +P P+P
Sbjct: 302 PPFAPRSGDAHYGAVAAAAAAALHGYGAVNLNLNLAAAAAAAAAGPGPHLQHHAPPPAPP 361
Query: 146 PSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPT 205
P P+PA+ P LPG G R + P L C P A L PPP
Sbjct: 362 PPPAPAQHPH-----QHHPHLPGAAGAFLRY--MRQPIKQELICKWIDPDELAGLPPPPP 414
Query: 206 RGSP 209
P
Sbjct: 415 PPPP 418
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 50.4 bits (119), Expect = 2e-06
Identities = 68/239 (28%), Positives = 84/239 (35%), Gaps = 35/239 (14%)
Query: 32 RIPSPCAGRGLEALGRDWRGTVAEPRPEAQGRV---PSFRSNARRVRSVRGGGVTAPAPP 88
R P P A R E RG RP A+G P R S+ +P P
Sbjct: 223 RAPRP-APRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPL 281
Query: 89 DAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSP 148
+GS P LAA A + R PS SP P RRRA SP P P
Sbjct: 282 QPRLGSASPPRLAAPLAGS-----RAPSLSPFPRRCRRRAERSPAGHGLPLPR------- 329
Query: 149 SPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGS 208
S +RGG + G + +R C + SP +PA P G
Sbjct: 330 SLSRGGE---VVGARRRRGGEERRVRGRRQ---------GCALGSPPIPAGPAAPGRAGE 377
Query: 209 PEIAEN-SKRSPGTGKKSRQG-RLRSLHPSLLPSLHPDPAQTFVTTPSLSPAGWVGGIP 265
A KR G G R+G + + + P A+ T SPA W GG P
Sbjct: 378 RRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPR-----ARGSSTCLRPSPATWQGGAP 431
Score = 33.5 bits (75), Expect = 0.21
Identities = 59/231 (25%), Positives = 80/231 (34%), Gaps = 41/231 (17%)
Query: 47 RDWRGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAA 106
R W + EP P GR+ + + +S R P V G+P A
Sbjct: 145 RRWLHSPREPTPP--GRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQP-----EQQA 197
Query: 107 AAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPAL 166
RS +P S A P +P+ +P P+P A G R + PA
Sbjct: 198 WEQRSSHFLAPEGSV------ASLLPSAKPARAPRPAPRAREEAAAGSRGRG-GAERPAA 250
Query: 167 PGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASL--TPPPTRGSPEIAENSKRSPGTGKK 224
G+ P+ L S+ + ASL +PPP + P G
Sbjct: 251 RGS----------AQQPPLARLLLASAVSLAASLARSPPPLQ------------PRLGSA 288
Query: 225 SRQGRLRSLHPSLLPSLHPDPAQTFVTTPSLSPAGWVGGIPLCRWLPEAGQ 275
S L S PSL P P + SPAG G+PL R L G+
Sbjct: 289 SPPRLAAPLAGSRAPSLSPFPRRC-RRRAERSPAG--HGLPLPRSLSRGGE 336
Score = 30.8 bits (68), Expect = 1.4
Identities = 38/137 (27%), Positives = 51/137 (37%), Gaps = 15/137 (10%)
Query: 110 RSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGT 169
R KPSP S + R + + G P+P P RW SP P
Sbjct: 107 RGRSKPSPPVSGTRRGKTGQWKEG------RGSHPTPEPQRLAARRWL----HSPREPTP 156
Query: 170 DGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGR 229
G R+S P + S H P + RG PE +RS + + +G
Sbjct: 157 PG---RLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQRS--SHFLAPEGS 211
Query: 230 LRSLHPSLLPSLHPDPA 246
+ SL PS P+ P PA
Sbjct: 212 VASLLPSAKPARAPRPA 228
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 50.4 bits (119), Expect = 2e-06
Identities = 68/239 (28%), Positives = 84/239 (35%), Gaps = 35/239 (14%)
Query: 32 RIPSPCAGRGLEALGRDWRGTVAEPRPEAQGRV---PSFRSNARRVRSVRGGGVTAPAPP 88
R P P A R E RG RP A+G P R S+ +P P
Sbjct: 223 RAPRP-APRAREEAAAGSRGRGGAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPL 281
Query: 89 DAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSP 148
+GS P LAA A + R PS SP P RRRA SP P P
Sbjct: 282 QPRLGSASPPRLAAPLAGS-----RAPSLSPFPRRCRRRAERSPAGHGLPLPR------- 329
Query: 149 SPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGS 208
S +RGG + G + +R C + SP +PA P G
Sbjct: 330 SLSRGGE---VVGARRRRGGEERRVRGRRQ---------GCALGSPPIPAGPAAPGRAGE 377
Query: 209 PEIAEN-SKRSPGTGKKSRQG-RLRSLHPSLLPSLHPDPAQTFVTTPSLSPAGWVGGIP 265
A KR G G R+G + + + P A+ T SPA W GG P
Sbjct: 378 RRAARQWRKRGGGPGVSPREGAQGEGVRGGVTPR-----ARGSSTCLRPSPATWQGGAP 431
Score = 33.5 bits (75), Expect = 0.21
Identities = 59/231 (25%), Positives = 80/231 (34%), Gaps = 41/231 (17%)
Query: 47 RDWRGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAA 106
R W + EP P GR+ + + +S R P V G+P A
Sbjct: 145 RRWLHSPREPTPP--GRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQP-----EQQA 197
Query: 107 AAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPAL 166
RS +P S A P +P+ +P P+P A G R + PA
Sbjct: 198 WEQRSSHFLAPEGSV------ASLLPSAKPARAPRPAPRAREEAAAGSRGRG-GAERPAA 250
Query: 167 PGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASL--TPPPTRGSPEIAENSKRSPGTGKK 224
G+ P+ L S+ + ASL +PPP + P G
Sbjct: 251 RGS----------AQQPPLARLLLASAVSLAASLARSPPPLQ------------PRLGSA 288
Query: 225 SRQGRLRSLHPSLLPSLHPDPAQTFVTTPSLSPAGWVGGIPLCRWLPEAGQ 275
S L S PSL P P + SPAG G+PL R L G+
Sbjct: 289 SPPRLAAPLAGSRAPSLSPFPRRC-RRRAERSPAG--HGLPLPRSLSRGGE 336
Score = 30.8 bits (68), Expect = 1.4
Identities = 38/137 (27%), Positives = 51/137 (37%), Gaps = 15/137 (10%)
Query: 110 RSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGT 169
R KPSP S + R + + G P+P P RW SP P
Sbjct: 107 RGRSKPSPPVSGTRRGKTGQWKEG------RGSHPTPEPQRLAARRWL----HSPREPTP 156
Query: 170 DGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGR 229
G R+S P + S H P + RG PE +RS + + +G
Sbjct: 157 PG---RLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQAWEQRS--SHFLAPEGS 211
Query: 230 LRSLHPSLLPSLHPDPA 246
+ SL PS P+ P PA
Sbjct: 212 VASLLPSAKPARAPRPA 228
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 48.9 bits (115), Expect = 5e-06
Identities = 44/155 (28%), Positives = 58/155 (37%), Gaps = 17/155 (10%)
Query: 81 GVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRAR-----NSPGIR 135
G A + E A L+A A P + P+P L +PG
Sbjct: 537 GEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDS 596
Query: 136 PSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGV-----LRRMSPVCPPSPVVLACL 190
+P P P P P P P GG C SS P+LPG + L + + PP P+
Sbjct: 597 TTPPPPPPPPPPPPPLPGG---VCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVG 653
Query: 191 VSSP-HVPASLT---PPPTRGSPEIAENSKRSPGT 221
+ SP +P PPP GS I PG+
Sbjct: 654 IPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGS 688
Score = 38.5 bits (88), Expect = 0.007
Identities = 39/131 (29%), Positives = 45/131 (34%), Gaps = 30/131 (22%)
Query: 80 GGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPS 139
G T P PP G G P+ ++ P P P P P AR P P P
Sbjct: 638 GDATIPPPPPLPEGVGIPS------PSSLPGGTAIPPPPPLPG----SARIPPPPPPLPG 687
Query: 140 PSPSPSPSPS-PARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPA 198
+ P P P P G P LPG G+ P PP P P +P
Sbjct: 688 SAGIPPPPPPLPGEAG----MPPPPPPLPGGPGI-----PPPPPFP-------GGPGIP- 730
Query: 199 SLTPPPTRGSP 209
PPP G P
Sbjct: 731 --PPPPGMGMP 739
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 48.9 bits (115), Expect = 5e-06
Identities = 44/155 (28%), Positives = 58/155 (37%), Gaps = 17/155 (10%)
Query: 81 GVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRAR-----NSPGIR 135
G A + E A L+A A P + P+P L +PG
Sbjct: 546 GEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDS 605
Query: 136 PSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGV-----LRRMSPVCPPSPVVLACL 190
+P P P P P P P GG C SS P+LPG + L + + PP P+
Sbjct: 606 TTPPPPPPPPPPPPPLPGG---VCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVG 662
Query: 191 VSSP-HVPASLT---PPPTRGSPEIAENSKRSPGT 221
+ SP +P PPP GS I PG+
Sbjct: 663 IPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGS 697
Score = 38.5 bits (88), Expect = 0.007
Identities = 39/131 (29%), Positives = 45/131 (34%), Gaps = 30/131 (22%)
Query: 80 GGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPS 139
G T P PP G G P+ ++ P P P P P AR P P P
Sbjct: 647 GDATIPPPPPLPEGVGIPS------PSSLPGGTAIPPPPPLPG----SARIPPPPPPLPG 696
Query: 140 PSPSPSPSPS-PARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPA 198
+ P P P P G P LPG G+ P PP P P +P
Sbjct: 697 SAGIPPPPPPLPGEAG----MPPPPPPLPGGPGI-----PPPPPFP-------GGPGIP- 739
Query: 199 SLTPPPTRGSP 209
PPP G P
Sbjct: 740 --PPPPGMGMP 748
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 48.5 bits (114), Expect = 6e-06
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 82 VTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPS 141
V APAP A P A AP P+P+P+P+ P P+P+P+
Sbjct: 142 VLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPA---------PVAAPAPAPA 192
Query: 142 PSPSPSPSPA 151
P+P+P+P+PA
Sbjct: 193 PAPAPAPAPA 202
Score = 47.8 bits (112), Expect = 1e-05
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 84 APAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPS 143
APAP A V + A +A A AP P+P+P+P +P P+P+P+P+
Sbjct: 146 APAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVA-------APAPAPAPAPAPA 198
Query: 144 PSPSPSP 150
P+P+P+P
Sbjct: 199 PAPAPAP 205
Score = 35.4 bits (80), Expect = 0.055
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 82 VTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSP 121
V APAP A + PA +AA A A AP P+P+P+P
Sbjct: 166 VLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 205
Score = 35.0 bits (79), Expect = 0.072
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 18/176 (10%)
Query: 64 VPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSL 123
VP+F +V R + AP P V P AA + + +P PS+
Sbjct: 76 VPAFYRETVQVGRCRL--LLAPRPVAVAVAVSPPLEPAAESLDGL-----EEAPEQLPSV 128
Query: 124 RRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPS 183
++P P +P+P+P+P+P A A +PA +P P+
Sbjct: 129 PVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPA--------PAPAPAPAPA 180
Query: 184 PVVLACLVSSPHVPASLTPPPTRGSPEIA--ENSKRSPGTGKKSRQGRLRSLHPSL 237
P +A +P PA P +P+ A E++++ G++ ++ LH +
Sbjct: 181 PAPVAAPAPAP-APAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGI 235
Score = 33.9 bits (76), Expect = 0.16
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 94 SGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARG 153
SGRPA A AA+A +++K S +R R++P P+P PSPS +P G
Sbjct: 236 SGRPAAGTA-AASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCPSPSAAPGVG 294
Score = 28.5 bits (62), Expect = 6.8
Identities = 21/82 (25%), Positives = 31/82 (37%)
Query: 84 APAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPS 143
APAP A + P A A A AP P+P+P + + + + + P
Sbjct: 170 APAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLAD 229
Query: 144 PSPSPSPARGGRWTTCASSSPA 165
S R T AS++ A
Sbjct: 230 QLHSGISGRPAAGTAAASANGA 251
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 48.5 bits (114), Expect = 6e-06
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 82 VTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPS 141
V APAP A P A AP P+P+P+P+ P P+P+P+
Sbjct: 142 VLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPA---------PVAAPAPAPA 192
Query: 142 PSPSPSPSPA 151
P+P+P+P+PA
Sbjct: 193 PAPAPAPAPA 202
Score = 47.8 bits (112), Expect = 1e-05
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 84 APAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPS 143
APAP A V + A +A A AP P+P+P+P +P P+P+P+P+
Sbjct: 146 APAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVA-------APAPAPAPAPAPA 198
Query: 144 PSPSPSP 150
P+P+P+P
Sbjct: 199 PAPAPAP 205
Score = 35.4 bits (80), Expect = 0.055
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 82 VTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSP 121
V APAP A + PA +AA A A AP P+P+P+P
Sbjct: 166 VLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 205
Score = 35.0 bits (79), Expect = 0.072
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 18/176 (10%)
Query: 64 VPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSL 123
VP+F +V R + AP P V P AA + + +P PS+
Sbjct: 76 VPAFYRETVQVGRCRL--LLAPRPVAVAVAVSPPLEPAAESLDGL-----EEAPEQLPSV 128
Query: 124 RRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPS 183
++P P +P+P+P+P+P A A +PA +P P+
Sbjct: 129 PVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPA--------PAPAPAPAPA 180
Query: 184 PVVLACLVSSPHVPASLTPPPTRGSPEIA--ENSKRSPGTGKKSRQGRLRSLHPSL 237
P +A +P PA P +P+ A E++++ G++ ++ LH +
Sbjct: 181 PAPVAAPAPAP-APAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGI 235
Score = 33.9 bits (76), Expect = 0.16
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 94 SGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARG 153
SGRPA A AA+A +++K S +R R++P P+P PSPS +P G
Sbjct: 236 SGRPAAGTA-AASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCPSPSAAPGVG 294
Score = 28.5 bits (62), Expect = 6.8
Identities = 21/82 (25%), Positives = 31/82 (37%)
Query: 84 APAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPS 143
APAP A + P A A A AP P+P+P + + + + + P
Sbjct: 170 APAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLAD 229
Query: 144 PSPSPSPARGGRWTTCASSSPA 165
S R T AS++ A
Sbjct: 230 QLHSGISGRPAAGTAAASANGA 251
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 48.5 bits (114), Expect = 6e-06
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 82 VTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPS 141
V APAP A P A AP P+P+P+P+ P P+P+P+
Sbjct: 153 VLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPA---------PVAAPAPAPA 203
Query: 142 PSPSPSPSPA 151
P+P+P+P+PA
Sbjct: 204 PAPAPAPAPA 213
Score = 47.8 bits (112), Expect = 1e-05
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 84 APAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPS 143
APAP A V + A +A A AP P+P+P+P +P P+P+P+P+
Sbjct: 157 APAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVA-------APAPAPAPAPAPA 209
Query: 144 PSPSPSP 150
P+P+P+P
Sbjct: 210 PAPAPAP 216
Score = 35.4 bits (80), Expect = 0.055
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 82 VTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSP 121
V APAP A + PA +AA A A AP P+P+P+P
Sbjct: 177 VLAPAPAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAP 216
Score = 35.0 bits (79), Expect = 0.072
Identities = 40/176 (22%), Positives = 70/176 (39%), Gaps = 18/176 (10%)
Query: 64 VPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSL 123
VP+F +V R + AP P V P AA + + +P PS+
Sbjct: 87 VPAFYRETVQVGRCRL--LLAPRPVAVAVAVSPPLEPAAESLDGL-----EEAPEQLPSV 139
Query: 124 RRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPS 183
++P P +P+P+P+P+P A A +PA +P P+
Sbjct: 140 PVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPA--------PAPAPAPAPA 191
Query: 184 PVVLACLVSSPHVPASLTPPPTRGSPEIA--ENSKRSPGTGKKSRQGRLRSLHPSL 237
P +A +P PA P +P+ A E++++ G++ ++ LH +
Sbjct: 192 PAPVAAPAPAP-APAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLADQLHSGI 246
Score = 33.9 bits (76), Expect = 0.16
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 94 SGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARG 153
SGRPA A AA+A +++K S +R R++P P+P PSPS +P G
Sbjct: 247 SGRPAAGTA-AASANGAAIKKLSGPLISDFFAKRKRSAPEKSSGDVPAPCPSPSAAPGVG 305
Score = 28.5 bits (62), Expect = 6.8
Identities = 21/82 (25%), Positives = 31/82 (37%)
Query: 84 APAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPS 143
APAP A + P A A A AP P+P+P + + + + + P
Sbjct: 181 APAPAPAPAPAPAPVAAPAPAPAPAPAPAPAPAPAPDAAPQESAEQGANQGQRGQEPLAD 240
Query: 144 PSPSPSPARGGRWTTCASSSPA 165
S R T AS++ A
Sbjct: 241 QLHSGISGRPAAGTAAASANGA 262
>gi|38373671 SEC24-related protein C [Homo sapiens]
Length = 1094
Score = 48.5 bits (114), Expect = 6e-06
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 5/177 (2%)
Query: 56 PRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKP 115
P + G P+ A ++ ++ G APAPP + +G G P LA+ A+ + P S
Sbjct: 122 PVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLAS-ASGSFPNSGLYG 180
Query: 116 SPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTD----G 171
S + +A+ PGI+ +PS + S +P G + + P LPG
Sbjct: 181 SYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPS 240
Query: 172 VLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQG 228
V + PP + ++ P P P + + +N P G +S G
Sbjct: 241 VSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYG 297
>gi|38373669 SEC24-related protein C [Homo sapiens]
Length = 1094
Score = 48.5 bits (114), Expect = 6e-06
Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 5/177 (2%)
Query: 56 PRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKP 115
P + G P+ A ++ ++ G APAPP + +G G P LA+ A+ + P S
Sbjct: 122 PVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLAS-ASGSFPNSGLYG 180
Query: 116 SPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTD----G 171
S + +A+ PGI+ +PS + S +P G + + P LPG
Sbjct: 181 SYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPS 240
Query: 172 VLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQG 228
V + PP + ++ P P P + + +N P G +S G
Sbjct: 241 VSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYG 297
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 48.1 bits (113), Expect = 8e-06
Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 10/172 (5%)
Query: 94 SGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARG 153
S P + P S +PS +P+L ++P + PS +P+ +PS +P+ R
Sbjct: 89 SNTPTLTPSSTPTLTPSSTPTLTPSSTPTLT---PSSTPTLTPSSTPTLTPSSTPTLTRS 145
Query: 154 GRWTTCASSSPAL--PGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGS-PE 210
T SS+P L T + +P PS S P + S TP T S P
Sbjct: 146 STPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPT 205
Query: 211 IAENS--KRSPGTGKKSRQGRLRSLHPSLLPSLHPD--PAQTFVTTPSLSPA 258
+ +S +P +L PS P+L P P T +TP+L+P+
Sbjct: 206 LTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTRSSTPTLTPS 257
Score = 41.2 bits (95), Expect = 0.001
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Query: 127 RARNSPGIRPSPSPS--PSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSP 184
R +P + PS P+ PS +P+ +P T C++ + T + +P PS
Sbjct: 47 REMGTPTLTPSSPPTLTPSNTPTLTPCSTPTLTPCSTPTLTPSNTPTLTPSSTPTLTPSS 106
Query: 185 VVLACLVSSPHVPASLTPPPTRGS-PEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHP 243
S+P + S TP T S P + +S +P + S S P+L PS P
Sbjct: 107 TPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSS--TPTLTRSSTPTLTPSSTPTLTPSSTP 164
Query: 244 --DPAQTFVTTPSLSP 257
P+ T TPS +P
Sbjct: 165 TLTPSSTPTLTPSSTP 180
Score = 36.6 bits (83), Expect = 0.025
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 94 SGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARG 153
S RP + P S +PS +P+L N+P + PS +P+ +PS +P+
Sbjct: 185 SSRPILTRSSTPTLTPSSTPTLTPSSTPTLT---PSNTPTLIPSSTPTLTPSSTPTLTPS 241
Query: 154 GRWTTCASSSPAL--PGTDGVLRRMSPVCPPS 183
R T SS+P L T + +P PS
Sbjct: 242 SRPTLTRSSTPTLTPSSTPTLTPSSTPTLTPS 273
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 47.8 bits (112), Expect = 1e-05
Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 26/192 (13%)
Query: 82 VTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSP-SPSPSLRRRRARNSPGIRPSPSP 140
V AP+PP A P A A + P + +P S S S+ ++P P P
Sbjct: 245 VPAPSPPLA------PVPALAPAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLS 298
Query: 141 SPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHV-PAS 199
+P+P+P P S+P L +PV P +P ++ V +P + P
Sbjct: 299 APAPAPLSVPV----------SAPPLALIQ------APVPPSAPTLVLAPVPTPVLAPMP 342
Query: 200 LTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFVTTPSLSPAG 259
+ PP +P +P +G S + + P+ +P+ P PA F P+ PA
Sbjct: 343 ASTPPAAPAPPSVPMPTPTPSSGPPSTPTLIPAFAPTPVPA--PTPAPIFTPAPTPMPAA 400
Query: 260 WVGGIPLCRWLP 271
IP +P
Sbjct: 401 TPAAIPTSAPIP 412
Score = 47.0 bits (110), Expect = 2e-05
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 82 VTAPAPPDAEVGSGRP------AGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIR 135
+ AP PP A P A + A AAP P P+P+PS ++P +
Sbjct: 317 IQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTPTPS---SGPPSTPTLI 373
Query: 136 PSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLR---RMSPVCPPSPVVLAC--- 189
P+ +P+P P+P+P+P T +++PA T + +S VC P+ A
Sbjct: 374 PAFAPTPVPAPTPAPIFTPAPTPMPAATPAAIPTSAPIPASFSLSRVCFPAAQAPAMQKV 433
Query: 190 -------LVSSPHVPASLTPPPTRGSP 209
V +P P PPP+ G P
Sbjct: 434 PLSFQPGTVLTPSQPLVYIPPPSCGQP 460
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 47.4 bits (111), Expect = 1e-05
Identities = 63/230 (27%), Positives = 80/230 (34%), Gaps = 19/230 (8%)
Query: 41 GLEALGRDWRGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGSGRPAGL 100
G + +G G +P + G R+ R V G A A V SG L
Sbjct: 427 GTQEVGGQDPGEAVQPCRQPLGA--RVADKVRKRRKVDEG-----AGDSAAVASGGAQTL 479
Query: 101 AARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCA 160
A A + AP K S + R P SPS +P PSP+ G
Sbjct: 480 AL-AGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGPSPAGPAGDEPAESP 538
Query: 161 SSSPA--LPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPTRGSP---EIAENS 215
S +P G G SP P P P S TP P+ P E AE+
Sbjct: 539 SETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESP 598
Query: 216 KRSPGTGKKSRQGRLRSLHPSLLPSLHP------DPAQTFVTTPSLSPAG 259
+PG G + PS P P +PA++ TP SPAG
Sbjct: 599 SETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAG 648
Score = 36.2 bits (82), Expect = 0.032
Identities = 38/136 (27%), Positives = 47/136 (34%), Gaps = 14/136 (10%)
Query: 139 SPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPA 198
SP+PS P + G + GT G SP P P P
Sbjct: 484 SPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPG-----SPSETPGPSPAGPAGDEPAESP 538
Query: 199 SLTPPPTRGSP---EIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHP------DPAQTF 249
S TP P P E AE+ +PG G + PS P P +PA++
Sbjct: 539 SETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAESP 598
Query: 250 VTTPSLSPAGWVGGIP 265
TP PAG G P
Sbjct: 599 SETPGPRPAGPAGDEP 614
Score = 33.1 bits (74), Expect = 0.27
Identities = 33/107 (30%), Positives = 39/107 (36%), Gaps = 25/107 (23%)
Query: 85 PAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARN---SPGIRP----- 136
PA +E RPAG A A +P P PSP+ R A + +PG RP
Sbjct: 554 PAESPSETPGPRPAGPAGDEPAESPSET--PGPSPAGPTRDEPAESPSETPGPRPAGPAG 611
Query: 137 -----SPSPSPSPSP----------SPSPARGGRWTTCASSSPALPG 168
SPS +P P P SPS G PA G
Sbjct: 612 DEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDEPAKAG 658
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 47.4 bits (111), Expect = 1e-05
Identities = 46/155 (29%), Positives = 56/155 (36%), Gaps = 29/155 (18%)
Query: 74 VRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPG 133
V + GG P P +G P+ A AA AP + P P P P L + P
Sbjct: 508 VATPSGGDAPTPGVP-----TGSPSPDLAPAAEPAPGAA-PPPPPPLPGLPSPQEA-PPS 560
Query: 134 IRPSPSPSP-SPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVS 192
P P P SP P P+P G P PGTDG PV PP P
Sbjct: 561 APPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDG------PVPPPPPP------- 607
Query: 193 SPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQ 227
PPP G P+ G G K+++
Sbjct: 608 --------PPPPPGGPPDALGRRDSELGPGVKAKK 634
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 46.6 bits (109), Expect = 2e-05
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 20/175 (11%)
Query: 97 PAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRW 156
P+ ++ P R +P+ +PS + P + PS +P+ +PS +P+
Sbjct: 20 PSSTPTLTPSSQPILTRSSTPTLTPS-------SPPTLTPSNTPTLTPSNTPTLTPSSTP 72
Query: 157 TTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPT-RGSPEIAENS 215
T SS+P L + R +P PS ++P + S TP T +P + +S
Sbjct: 73 TLTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSS 132
Query: 216 ------KRSPGTGKKSRQGRLRSLHPSLLPSLHP------DPAQTFVTTPSLSPA 258
+P SR RS P+L PS P P T +TP+L+P+
Sbjct: 133 TPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPS 187
Score = 43.5 bits (101), Expect = 2e-04
Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 26/175 (14%)
Query: 97 PAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNS---------PGIRPSPSPSPSPSPS 147
P+ ++ P R +P+ +PS R R+S P + PS +P+ +PS +
Sbjct: 138 PSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSST 197
Query: 148 PSPARGGRWTTCASSSPAL-PGTDGVLRRMS-PVCPPSPVVLACLVSSPHVPASLTPPPT 205
P+ R SS+P L P + +L S P PS + S+P + S TP T
Sbjct: 198 PTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLT 257
Query: 206 RGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPD--PAQTFVTTPSLSPA 258
P +L PS P+L P P T +TP+L+P+
Sbjct: 258 -------------PSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPS 299
Score = 38.9 bits (89), Expect = 0.005
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Query: 130 NSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPAL-PGTDGVLR-RMSPVCPPSPVVL 187
N+P + PS P+ +PS +P+ + SS+P L P + L +P PS
Sbjct: 6 NTPTLTPSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPT 65
Query: 188 ACLVSSPHVPASLTPPPTRGSPEIAENS--KRSPGTGKKSRQGRLRSLHPSLLPSLHPD- 244
S+P + S TP T P + +S +P + +L PS P+L P
Sbjct: 66 LTPSSTPTLTPSSTPTLT-PQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSN 124
Query: 245 -PAQTFVTTPSLSPA 258
P T +TP+L+P+
Sbjct: 125 TPTLTPSSTPTLTPS 139
Score = 36.6 bits (83), Expect = 0.025
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 33/128 (25%)
Query: 134 IRPSPSPSPSPSPSPSPARGGRWTTCASSSPAL-PGTDGVLRRMS--PVCPPSPVVLACL 190
+ PS +P+ +PS P T SS+P L P + +L R S + P SP L
Sbjct: 2 LTPSNTPTLTPSSPP--------TLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTL--- 50
Query: 191 VSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFV 250
+P +LTP T P + +S +L PS P+L P P T
Sbjct: 51 --TPSNTPTLTPSNT---PTLTPSS--------------TPTLTPSSTPTLTPQPILTRS 91
Query: 251 TTPSLSPA 258
+TP+L+P+
Sbjct: 92 STPTLTPS 99
Score = 30.4 bits (67), Expect = 1.8
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 82 VTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRA-----RNSPGIRP 136
+ P+ S RP + P S +PS +P+L N+P + P
Sbjct: 223 ILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTP 282
Query: 137 SPSPSPSPSPSPSPARGGRW 156
S +P+ +PS +P+ W
Sbjct: 283 SSTPTLTPSSTPTLTPSSLW 302
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 46.6 bits (109), Expect = 2e-05
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 20/175 (11%)
Query: 97 PAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRW 156
P+ ++ P R +P+ +PS + P + PS +P+ +PS +P+
Sbjct: 20 PSSTPTLTPSSQPILTRSSTPTLTPS-------SPPTLTPSNTPTLTPSNTPTLTPSSTP 72
Query: 157 TTCASSSPALPGTDGVLRRMSPVCPPSPVVLACLVSSPHVPASLTPPPT-RGSPEIAENS 215
T SS+P L + R +P PS ++P + S TP T +P + +S
Sbjct: 73 TLTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSS 132
Query: 216 ------KRSPGTGKKSRQGRLRSLHPSLLPSLHP------DPAQTFVTTPSLSPA 258
+P SR RS P+L PS P P T +TP+L+P+
Sbjct: 133 TPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPS 187
Score = 43.5 bits (101), Expect = 2e-04
Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 26/175 (14%)
Query: 97 PAGLAARAAAAAPRSLRKPSPSPSPSLRRRRARNS---------PGIRPSPSPSPSPSPS 147
P+ ++ P R +P+ +PS R R+S P + PS +P+ +PS +
Sbjct: 138 PSSTPTLTPSSRPILTRSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSST 197
Query: 148 PSPARGGRWTTCASSSPAL-PGTDGVLRRMS-PVCPPSPVVLACLVSSPHVPASLTPPPT 205
P+ R SS+P L P + +L S P PS + S+P + S TP T
Sbjct: 198 PTLTPSSRPILTRSSTPTLTPSSRPILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLT 257
Query: 206 RGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPD--PAQTFVTTPSLSPA 258
P +L PS P+L P P T +TP+L+P+
Sbjct: 258 -------------PSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPS 299
Score = 38.9 bits (89), Expect = 0.005
Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Query: 130 NSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPAL-PGTDGVLR-RMSPVCPPSPVVL 187
N+P + PS P+ +PS +P+ + SS+P L P + L +P PS
Sbjct: 6 NTPTLTPSSPPTLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPT 65
Query: 188 ACLVSSPHVPASLTPPPTRGSPEIAENS--KRSPGTGKKSRQGRLRSLHPSLLPSLHPD- 244
S+P + S TP T P + +S +P + +L PS P+L P
Sbjct: 66 LTPSSTPTLTPSSTPTLT-PQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSN 124
Query: 245 -PAQTFVTTPSLSPA 258
P T +TP+L+P+
Sbjct: 125 TPTLTPSSTPTLTPS 139
Score = 36.6 bits (83), Expect = 0.025
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 33/128 (25%)
Query: 134 IRPSPSPSPSPSPSPSPARGGRWTTCASSSPAL-PGTDGVLRRMS--PVCPPSPVVLACL 190
+ PS +P+ +PS P T SS+P L P + +L R S + P SP L
Sbjct: 2 LTPSNTPTLTPSSPP--------TLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTL--- 50
Query: 191 VSSPHVPASLTPPPTRGSPEIAENSKRSPGTGKKSRQGRLRSLHPSLLPSLHPDPAQTFV 250
+P +LTP T P + +S +L PS P+L P P T
Sbjct: 51 --TPSNTPTLTPSNT---PTLTPSS--------------TPTLTPSSTPTLTPQPILTRS 91
Query: 251 TTPSLSPA 258
+TP+L+P+
Sbjct: 92 STPTLTPS 99
Score = 30.4 bits (67), Expect = 1.8
Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 82 VTAPAPPDAEVGSGRPAGLAARAAAAAPRSLRKPSPSPSPSLRRRRA-----RNSPGIRP 136
+ P+ S RP + P S +PS +P+L N+P + P
Sbjct: 223 ILTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTP 282
Query: 137 SPSPSPSPSPSPSPARGGRW 156
S +P+ +PS +P+ W
Sbjct: 283 SSTPTLTPSSTPTLTPSSLW 302
>gi|217416343 fibrosin-like 1 [Homo sapiens]
Length = 1045
Score = 46.6 bits (109), Expect = 2e-05
Identities = 62/211 (29%), Positives = 82/211 (38%), Gaps = 26/211 (12%)
Query: 63 RVPSFRSNARRVRSVRGGGVTAPAPPD--AEVGSGRPAGLAARAAAAAPRSLRKPSPSPS 120
R P S+A V S RG + + PD A VGS + A +S K P P
Sbjct: 188 RDPLSDSSAHAV-SGRGYSCDSESGPDDKASVGSEKLFAPGTDKGPALEKSEAKAGPVPK 246
Query: 121 PS-LRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMSPV 179
S L R R ++ P+ SP+P +P P P G R P P R +P
Sbjct: 247 VSGLERSRELSAESFLPTASPAPHAAPCPGPPPGSRANPLVKKEPPAP------HRHTPQ 300
Query: 180 CPPSPVVLACLVSSPHVPASL------TPPPTRGSPEIAENSKRSPGTGKK---SRQG-- 228
PP P L + HVPASL + G ++ +S G GK S G
Sbjct: 301 -PPPPQPRGLLPT--HVPASLGAFAGHSQAAANGLHGLSRSSSAPLGLGKHVSLSPHGPG 357
Query: 229 -RLRSLHPSL-LPSLHPDPAQTFVTTPSLSP 257
L + H +L + H A F P+L P
Sbjct: 358 PHLSTSHLALRSQAQHQLHAAMFAAPPTLPP 388
Score = 28.5 bits (62), Expect = 6.8
Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 17/84 (20%)
Query: 54 AEPRPEAQGRVPSFRSNAR------RVRSVRGGGVTAPAPPDAEVGSGRPAGLAARAAAA 107
A+ RP + R R R R +S G P+P G G R AA
Sbjct: 3 AKVRPSRRSRAQRDRGRRREAARDARAQSPSSGDEPEPSPGKENAGL---RGAPPRGAAP 59
Query: 108 APRSLRKPSPSPSPSLRRRRARNS 131
APR+ R P RRRR +S
Sbjct: 60 APRTARPP--------RRRRRESS 75
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,290,489
Number of Sequences: 37866
Number of extensions: 1293834
Number of successful extensions: 20802
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 1845
Number of HSP's that attempted gapping in prelim test: 9734
Number of HSP's gapped (non-prelim): 7652
length of query: 278
length of database: 18,247,518
effective HSP length: 101
effective length of query: 177
effective length of database: 14,423,052
effective search space: 2552880204
effective search space used: 2552880204
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.