Guide to the Human Genome
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Search of human proteins with 239751973

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo
sapiens]
         (537 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo ...  1104   0.0  
gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo ...  1102   0.0  
gi|169214772 PREDICTED: similar to hCG1783157 [Homo sapiens]         1093   0.0  
gi|226529477 cystatin 9 precursor [Homo sapiens]                       56   9e-08
gi|18104940 cystatin 9-like precursor [Homo sapiens]                   44   3e-04
gi|4503105 cystatin SA precursor [Homo sapiens]                        43   6e-04
gi|4503107 cystatin C precursor [Homo sapiens]                         40   0.005
gi|4503109 cystatin S precursor [Homo sapiens]                         40   0.005
gi|19882251 cystatin SN precursor [Homo sapiens]                       40   0.007
gi|19882256 cystatin D precursor [Homo sapiens]                        35   0.17 
gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]          35   0.17 
gi|239743164 PREDICTED: hypothetical protein [Homo sapiens]            34   0.39 
gi|239508826 PREDICTED: hypothetical protein [Homo sapiens]            34   0.39 
gi|157785645 SPEG complex locus [Homo sapiens]                         33   0.66 
gi|169211489 PREDICTED: hypothetical protein [Homo sapiens]            33   0.86 
gi|169210715 PREDICTED: hypothetical protein [Homo sapiens]            33   0.86 
gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]              32   1.1  
gi|5032281 dystrophin Dp427c isoform [Homo sapiens]                    32   1.9  
gi|5032307 dystrophin Dp140c isoform [Homo sapiens]                    32   1.9  
gi|5032295 dystrophin Dp116 isoform [Homo sapiens]                     32   1.9  
gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]                   32   1.9  
gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]                 32   1.9  
gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]                   32   1.9  
gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]                   32   1.9  
gi|5032313 dystrophin Dp140bc isoform [Homo sapiens]                   32   1.9  
gi|5032311 dystrophin Dp140ab isoform [Homo sapiens]                   32   1.9  
gi|5032309 dystrophin Dp140b isoform [Homo sapiens]                    32   1.9  
gi|5032303 dystrophin Dp71ab isoform [Homo sapiens]                    32   1.9  
gi|5032301 dystrophin Dp71a isoform [Homo sapiens]                     32   1.9  
gi|5032299 dystrophin Dp71b isoform [Homo sapiens]                     32   1.9  

>gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo
           sapiens]
          Length = 537

 Score = 1104 bits (2856), Expect = 0.0
 Identities = 537/537 (100%), Positives = 537/537 (100%)

Query: 1   MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
           MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG
Sbjct: 1   MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60

Query: 61  TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
           TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF
Sbjct: 61  TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120

Query: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
           QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE
Sbjct: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180

Query: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
           AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH
Sbjct: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240

Query: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
           SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP
Sbjct: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300

Query: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED 360
           ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED
Sbjct: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED 360

Query: 361 SHVVEGAPAHGTYCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420
           SHVVEGAPAHGTYCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR
Sbjct: 361 SHVVEGAPAHGTYCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420

Query: 421 AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK 480
           AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK
Sbjct: 421 AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK 480

Query: 481 KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537
           KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG
Sbjct: 481 KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537


>gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo
           sapiens]
          Length = 537

 Score = 1102 bits (2849), Expect = 0.0
 Identities = 536/537 (99%), Positives = 536/537 (99%)

Query: 1   MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
           MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG
Sbjct: 1   MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60

Query: 61  TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
           TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF
Sbjct: 61  TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120

Query: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
           QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE
Sbjct: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180

Query: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
           AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH
Sbjct: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240

Query: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
           SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP
Sbjct: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300

Query: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED 360
           ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED
Sbjct: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGLQLEEASLKSGYAED 360

Query: 361 SHVVEGAPAHGTYCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420
           SHVVEGAPAHGTYCAEHPHLDHSK IRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR
Sbjct: 361 SHVVEGAPAHGTYCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420

Query: 421 AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK 480
           AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK
Sbjct: 421 AQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEKK 480

Query: 481 KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537
           KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG
Sbjct: 481 KLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537


>gi|169214772 PREDICTED: similar to hCG1783157 [Homo sapiens]
          Length = 538

 Score = 1093 bits (2827), Expect = 0.0
 Identities = 534/538 (99%), Positives = 535/538 (99%), Gaps = 1/538 (0%)

Query: 1   MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60
           MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG
Sbjct: 1   MVAAGDTGRLDARTGAFIGEQWGVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRG 60

Query: 61  TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120
           TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF
Sbjct: 61  TLQKGVKGGRVNSDTDDSPVPTSPRVASAGLACFGGGGSGEEASERTLWKGSVSTSCLCF 120

Query: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180
           QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE
Sbjct: 121 QDGLNLSGGTKAKQKKLCRTGNVHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKE 180

Query: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240
           AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH
Sbjct: 181 AGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPAWGADTRIPFEKLMEAVAH 240

Query: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300
           SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP
Sbjct: 241 SPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAINQEGASLPGEP 300

Query: 301 ANITELRNWLTRGLRDFFFPGEPYMHYVRASQVGSRSPPGLLRAGL-QLEEASLKSGYAE 359
           ANITELRNWLTRGLRDFFFPGEPY+HYVRASQVGSRSPPGLLRAGL QLEEASLKSGYAE
Sbjct: 301 ANITELRNWLTRGLRDFFFPGEPYLHYVRASQVGSRSPPGLLRAGLQQLEEASLKSGYAE 360

Query: 360 DSHVVEGAPAHGTYCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQ 419
           DSHVVEGAPAHGTYCAEHPHLDHSK IRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQ
Sbjct: 361 DSHVVEGAPAHGTYCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQ 420

Query: 420 RAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEK 479
           RAQQKVSGSHFVHSQNSLHRLNSSKP VMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEK
Sbjct: 421 RAQQKVSGSHFVHSQNSLHRLNSSKPGVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAEK 480

Query: 480 KKLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 537
           KKLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG
Sbjct: 481 KKLAANSKTSGTRAPGKEQDSARFLSVTGVDDNQWGQKSTFRELHGPSQISWYGGMKG 538


>gi|226529477 cystatin 9 precursor [Homo sapiens]
          Length = 159

 Score = 55.8 bits (133), Expect = 9e-08
 Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 13/102 (12%)

Query: 373 YCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVH 432
           +C+E     ++KI++    F+A++EFA+  FN  + EE+ +RLL V  + +         
Sbjct: 29  WCSEEEMGGNNKIVQ-DPMFLATVEFALNTFNVQSKEEHAYRLLRVLSSWR--------- 78

Query: 433 SQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQE 474
            ++S+ R    K V     +L++  T+C+K+++DIDNCP QE
Sbjct: 79  -EDSMDRKWRGKMVFSM--NLQLRQTVCRKFEDDIDNCPFQE 117


>gi|18104940 cystatin 9-like precursor [Homo sapiens]
          Length = 147

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 17/87 (19%)

Query: 390 QYFVASMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPVVMA 449
           +Y  A++EFAV  FN+ + + Y +RL                H  NS      SK V   
Sbjct: 45  RYLPATVEFAVHTFNQQSKDYYAYRL---------------GHILNSWKEQVESKTVFSM 89

Query: 450 AGDLEMGLTICKKYDEDIDNCPLQEGS 476
             +L +G T C K+++DIDNC  QE +
Sbjct: 90  --ELLLGRTRCGKFEDDIDNCHFQEST 114


>gi|4503105 cystatin SA precursor [Homo sapiens]
          Length = 141

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 32/123 (26%)

Query: 359 EDSHVVEGAPAHGTYCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEV 418
           E+  ++EG    G Y A+   L+  ++ R       ++ F ++++N+   +EY  RLL V
Sbjct: 25  EEDRIIEG----GIYDAD---LNDERVQR-------ALHFVISEYNKATEDEYYRRLLRV 70

Query: 419 QRAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAE 478
            RA++++ G                   V    D+E+G TIC K   ++D C   E    
Sbjct: 71  LRAREQIVGG------------------VNYFFDIEVGRTICTKSQPNLDTCAFHEQPEL 112

Query: 479 KKK 481
           +KK
Sbjct: 113 QKK 115


>gi|4503107 cystatin C precursor [Homo sapiens]
          Length = 146

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 22/89 (24%)

Query: 395 SMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSG--SHFVHSQNSLHRLNSSKPVVMAAGD 452
           +++FAV ++N+ + + Y  R L+V RA++++    ++F+                    D
Sbjct: 52  ALDFAVGEYNKASNDMYHSRALQVVRARKQIVAGVNYFL--------------------D 91

Query: 453 LEMGLTICKKYDEDIDNCPLQEGSAEKKK 481
           +E+G T C K   ++DNCP  +    K+K
Sbjct: 92  VELGRTTCTKTQPNLDNCPFHDQPHLKRK 120


>gi|4503109 cystatin S precursor [Homo sapiens]
          Length = 141

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 18/87 (20%)

Query: 395 SMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLE 454
           ++ FA++++N+   +EY  R L+V RA+++  G                   V    D+E
Sbjct: 47  ALHFAISEYNKATEDEYYRRPLQVLRAREQTFGG------------------VNYFFDVE 88

Query: 455 MGLTICKKYDEDIDNCPLQEGSAEKKK 481
           +G TIC K   ++D C   E    +KK
Sbjct: 89  VGRTICTKSQPNLDTCAFHEQPELQKK 115


>gi|19882251 cystatin SN precursor [Homo sapiens]
          Length = 141

 Score = 39.7 bits (91), Expect = 0.007
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 18/87 (20%)

Query: 395 SMEFAVAQFNEDNMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLE 454
           ++ FA++++N+   ++Y  R L V RA+Q+  G                   V    D+E
Sbjct: 47  ALHFAISEYNKATKDDYYRRPLRVLRARQQTVGG------------------VNYFFDVE 88

Query: 455 MGLTICKKYDEDIDNCPLQEGSAEKKK 481
           +G TIC K   ++D C   E    +KK
Sbjct: 89  VGRTICTKSQPNLDTCAFHEQPELQKK 115


>gi|19882256 cystatin D precursor [Homo sapiens]
          Length = 142

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 19/81 (23%)

Query: 395 SMEFAVAQFNED-NMEEYTHRLLEVQRAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDL 453
           +++FA++++N+  N +EY  R L+V  A Q++ G                   V    ++
Sbjct: 47  ALDFAISEYNKVINKDEYYSRPLQVMAAYQQIVGG------------------VNYYFNV 88

Query: 454 EMGLTICKKYDEDIDNCPLQE 474
           + G T C K   ++DNCP  +
Sbjct: 89  KFGRTTCTKSQPNLDNCPFND 109


>gi|122937269 Wilms tumor 1 interacting protein [Homo sapiens]
          Length = 430

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 12/88 (13%)

Query: 23  GVGTVGRGRLHRKPLSPSLVPGDEFWKIPSLRGQRSRGT------LQKGVKGGRVNSDTD 76
           G G+ GRGR   +P      PGDE       RG+ S G       L +G +G R  +  +
Sbjct: 26  GCGSPGRGRRGPRP-----GPGDEAAPALGRRGKGSGGPEAGADGLSRGERGPRRAAVPE 80

Query: 77  DSPVPT-SPRVASAGLACFGGGGSGEEA 103
            S  P  SPR + AG    GGGGS   +
Sbjct: 81  LSAQPAGSPRASLAGSDGGGGGGSARSS 108


>gi|239743164 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 222

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 15/174 (8%)

Query: 179 KEAGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPA-W--GADTRIPFEKLM 235
           +EAG   +GG S     W   +  +  +GP   F      PG A W   +++    E   
Sbjct: 21  QEAGALDSGGCSEARASWAWRVRCEAETGPVQAFGRQEAGPGEADWRSSSESAEAAESQK 80

Query: 236 EAVAHSPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAI--NQEG 293
             +   P     A   E       + L  L++T    +  E   L   R+ WA   ++E 
Sbjct: 81  WGLGRPPGGMNWAGPKEATGRQEDLGLEILIQTFAPGEAAERPELGLGRMIWACRGHREA 140

Query: 294 ASLPGEPANITELRNWLTRGLRDF-FFPGEPYMHYV------RASQVGSRSPPG 340
            ++PG+   +T    W  RG R+    PG+ Y+  V      R  ++G   P G
Sbjct: 141 GAVPGQAYLMTV---WAYRGRREAGAVPGQAYLTTVWSCRGCREEELGLERPTG 191


>gi|239508826 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 222

 Score = 33.9 bits (76), Expect = 0.39
 Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 15/174 (8%)

Query: 179 KEAGPGGAGGRSSTGLHWQHYLLVDLVSGPWVLFLSPTCPPGPA-W--GADTRIPFEKLM 235
           +EAG   +GG S     W   +  +  +GP   F      PG A W   +++    E   
Sbjct: 21  QEAGALDSGGCSEARASWAWRVRCEAETGPVQAFGRQEAGPGEADWRSSSESAEAAESQK 80

Query: 236 EAVAHSPENRECAPYGEQASLASVIMLSCLMKTVLLAKLNECSSLDSERIEWAI--NQEG 293
             +   P     A   E       + L  L++T    +  E   L   R+ WA   ++E 
Sbjct: 81  WGLGRPPGGMNWAGPKEATGRQEDLGLEILIQTFAPGEAAERPELGLGRMIWACRGHREA 140

Query: 294 ASLPGEPANITELRNWLTRGLRDF-FFPGEPYMHYV------RASQVGSRSPPG 340
            ++PG+   +T    W  RG R+    PG+ Y+  V      R  ++G   P G
Sbjct: 141 GAVPGQAYLMTV---WAYRGRREAGAVPGQAYLTTVWSCRGCREEELGLERPTG 191


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 15/151 (9%)

Query: 279  SLDSERIEWAINQEGASLPGEPANITELRN--WLTRGLRDFFFPGEPYMHYVRASQVGSR 336
            ++D + + + +  +        A +T LR   W   GLR     G  ++  V ++ V S 
Sbjct: 1312 AIDPDSLTYTVQHQVLGSDQWTALVTGLREPGWAATGLRK----GVQHIFRVLSTTVKSS 1367

Query: 337  SPPG-------LLRAGLQLEEASLKSGYAEDSHVVEGAPAHGTYCAEHPHLDHSKIIRRH 389
            S P        LL  G  LEEA       +  +VVEG PA  T      H++   + R  
Sbjct: 1368 SKPSPPSEPVQLLEHGPTLEEAPAMLDKPDIVYVVEGQPASVT--VTFNHVEAQVVWRSC 1425

Query: 390  QYFVASMEFAVAQFNEDNMEEYTHRLLEVQR 420
            +  +      V + ++ + ++Y  R+  V R
Sbjct: 1426 RGALLEARAGVYELSQPDDDQYCLRICRVSR 1456


>gi|169211489 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 176

 Score = 32.7 bits (73), Expect = 0.86
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 216 TCPPGPAWGADT-RIPFEKLMEAVAHSPENREC--APYGEQASLASVIML--SCLMKTVL 270
           TCPPGPA  + T   PF +         E +E   +P G    L ++++L  S  +K   
Sbjct: 11  TCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVLDFSSFLKGQR 70

Query: 271 LAKLNECSSLDSERIEWAINQEGASLPGE 299
           + K+++    + + +EW  NQ    L  E
Sbjct: 71  VMKMDQDPPGEVKNMEWHHNQNRRGLRSE 99


>gi|169210715 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 176

 Score = 32.7 bits (73), Expect = 0.86
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 216 TCPPGPAWGADT-RIPFEKLMEAVAHSPENREC--APYGEQASLASVIML--SCLMKTVL 270
           TCPPGPA  + T   PF +         E +E   +P G    L ++++L  S  +K   
Sbjct: 11  TCPPGPAPSSPTVSRPFPETTRDAGDKDEGKESFPSPNGALILLPTLLVLDFSSFLKGQR 70

Query: 271 LAKLNECSSLDSERIEWAINQEGASLPGE 299
           + K+++    + + +EW  NQ    L  E
Sbjct: 71  VMKMDQDPPGEVKNMEWHHNQNRRGLRSE 99


>gi|148277064 cut-like homeobox 1 isoform a [Homo sapiens]
          Length = 1505

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 123 GLNLSGGTKAKQKKLCRTGN-VHLRPQWAAHGPSLVSVQTCLASSLRPQVARQEGGTKEA 181
           GL+  G     Q  L +  N V     W  H  S V  +   A+S     A + GG KE 
Sbjct: 793 GLDPQGAADCAQGVLRQVKNEVGRSGAWKDHWWSAVQPERRNAASSEEAKAEETGGGKEK 852

Query: 182 GPGGAGGRS 190
           G GG+GG S
Sbjct: 853 GSGGSGGGS 861


>gi|5032281 dystrophin Dp427c isoform [Homo sapiens]
          Length = 3677

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 383  SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
            +K++R+H+  + +    + + +   +E   HRL   LE  +A+ KV+G+       SL R
Sbjct: 3554 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 3612

Query: 440  LNSSKPVVM 448
             +SS+P+++
Sbjct: 3613 SDSSQPMLL 3621


>gi|5032307 dystrophin Dp140c isoform [Homo sapiens]
          Length = 1105

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 383  SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
            +K++R+H+  + +    + + +   +E   HRL   LE  +A+ KV+G+       SL R
Sbjct: 982  AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 1040

Query: 440  LNSSKPVVM 448
             +SS+P+++
Sbjct: 1041 SDSSQPMLL 1049


>gi|5032295 dystrophin Dp116 isoform [Homo sapiens]
          Length = 956

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
           +K++R+H+  + +    + + +   +E   HRL   LE  +A+ KV+G+       SL R
Sbjct: 833 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 891

Query: 440 LNSSKPVVM 448
            +SS+P+++
Sbjct: 892 SDSSQPMLL 900


>gi|5032291 dystrophin Dp260-2 isoform [Homo sapiens]
          Length = 2341

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 383  SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
            +K++R+H+  + +    + + +   +E   HRL   LE  +A+ KV+G+       SL R
Sbjct: 2218 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 2276

Query: 440  LNSSKPVVM 448
             +SS+P+++
Sbjct: 2277 SDSSQPMLL 2285


>gi|150036268 dystrophin Dp260-1 isoform [Homo sapiens]
          Length = 2344

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 383  SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
            +K++R+H+  + +    + + +   +E   HRL   LE  +A+ KV+G+       SL R
Sbjct: 2221 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 2279

Query: 440  LNSSKPVVM 448
             +SS+P+++
Sbjct: 2280 SDSSQPMLL 2288


>gi|5032315 dystrophin Dp427p2 isoform [Homo sapiens]
          Length = 3562

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 383  SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
            +K++R+H+  + +    + + +   +E   HRL   LE  +A+ KV+G+       SL R
Sbjct: 3439 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 3497

Query: 440  LNSSKPVVM 448
             +SS+P+++
Sbjct: 3498 SDSSQPMLL 3506


>gi|5032287 dystrophin Dp427p1 isoform [Homo sapiens]
          Length = 3681

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 383  SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
            +K++R+H+  + +    + + +   +E   HRL   LE  +A+ KV+G+       SL R
Sbjct: 3558 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 3616

Query: 440  LNSSKPVVM 448
             +SS+P+++
Sbjct: 3617 SDSSQPMLL 3625


>gi|5032313 dystrophin Dp140bc isoform [Homo sapiens]
          Length = 1133

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 383  SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
            +K++R+H+  + +    + + +   +E   HRL   LE  +A+ KV+G+       SL R
Sbjct: 992  AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 1050

Query: 440  LNSSKPVVM 448
             +SS+P+++
Sbjct: 1051 SDSSQPMLL 1059


>gi|5032311 dystrophin Dp140ab isoform [Homo sapiens]
          Length = 1230

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 383  SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
            +K++R+H+  + +    + + +   +E   HRL   LE  +A+ KV+G+       SL R
Sbjct: 1089 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 1147

Query: 440  LNSSKPVVM 448
             +SS+P+++
Sbjct: 1148 SDSSQPMLL 1156


>gi|5032309 dystrophin Dp140b isoform [Homo sapiens]
          Length = 1243

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 383  SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
            +K++R+H+  + +    + + +   +E   HRL   LE  +A+ KV+G+       SL R
Sbjct: 1102 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 1160

Query: 440  LNSSKPVVM 448
             +SS+P+++
Sbjct: 1161 SDSSQPMLL 1169


>gi|5032303 dystrophin Dp71ab isoform [Homo sapiens]
          Length = 622

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
           +K++R+H+  + +    + + +   +E   HRL   LE  +A+ KV+G+       SL R
Sbjct: 481 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 539

Query: 440 LNSSKPVVM 448
            +SS+P+++
Sbjct: 540 SDSSQPMLL 548


>gi|5032301 dystrophin Dp71a isoform [Homo sapiens]
          Length = 604

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
           +K++R+H+  + +    + + +   +E   HRL   LE  +A+ KV+G+       SL R
Sbjct: 481 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 539

Query: 440 LNSSKPVVM 448
            +SS+P+++
Sbjct: 540 SDSSQPMLL 548


>gi|5032299 dystrophin Dp71b isoform [Homo sapiens]
          Length = 635

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 383 SKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRL---LEVQRAQQKVSGSHFVHSQNSLHR 439
           +K++R+H+  + +    + + +   +E   HRL   LE  +A+ KV+G+       SL R
Sbjct: 494 AKLLRQHKGRLEA-RMQILEDHNKQLESQLHRLRQLLEQPQAEAKVNGTTVSSPSTSLQR 552

Query: 440 LNSSKPVVM 448
            +SS+P+++
Sbjct: 553 SDSSQPMLL 561


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.132    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,903,944
Number of Sequences: 37866
Number of extensions: 1211491
Number of successful extensions: 3872
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 3834
Number of HSP's gapped (non-prelim): 89
length of query: 537
length of database: 18,247,518
effective HSP length: 107
effective length of query: 430
effective length of database: 14,195,856
effective search space: 6104218080
effective search space used: 6104218080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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