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Search of human proteins with 239751929
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
(382 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 800 0.0
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 800 0.0
gi|239757414 PREDICTED: hypothetical protein XP_002345432 [Homo ... 238 7e-63
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 60 3e-09
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 51 2e-06
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 51 2e-06
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 49 1e-05
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 49 1e-05
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 49 1e-05
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 48 1e-05
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 48 1e-05
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 47 2e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 47 2e-05
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 47 2e-05
gi|33286436 gametogenetin [Homo sapiens] 47 3e-05
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 47 4e-05
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 47 4e-05
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 46 5e-05
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 46 5e-05
gi|42821110 hypothetical protein LOC340602 [Homo sapiens] 46 5e-05
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 46 6e-05
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 46 6e-05
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 46 6e-05
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens] 45 8e-05
gi|239741968 PREDICTED: hypothetical protein [Homo sapiens] 45 8e-05
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 800 bits (2065), Expect = 0.0
Identities = 382/382 (100%), Positives = 382/382 (100%)
Query: 1 MGGTLSGPHPDRVHEALHLGGVQHGRQRPDEHAQRHVVHRGDAARVDAAALRAAARPGPL 60
MGGTLSGPHPDRVHEALHLGGVQHGRQRPDEHAQRHVVHRGDAARVDAAALRAAARPGPL
Sbjct: 1 MGGTLSGPHPDRVHEALHLGGVQHGRQRPDEHAQRHVVHRGDAARVDAAALRAAARPGPL 60
Query: 61 GRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTP 120
GRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTP
Sbjct: 61 GRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTP 120
Query: 121 PRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAG 180
PRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAG
Sbjct: 121 PRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAG 180
Query: 181 RGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLK 240
RGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLK
Sbjct: 181 RGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLK 240
Query: 241 AEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAG 300
AEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAG
Sbjct: 241 AEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAG 300
Query: 301 QRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPSP 360
QRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPSP
Sbjct: 301 QRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPSP 360
Query: 361 PQLRVSKLPPHSRVPFLSECRL 382
PQLRVSKLPPHSRVPFLSECRL
Sbjct: 361 PQLRVSKLPPHSRVPFLSECRL 382
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 800 bits (2065), Expect = 0.0
Identities = 382/382 (100%), Positives = 382/382 (100%)
Query: 1 MGGTLSGPHPDRVHEALHLGGVQHGRQRPDEHAQRHVVHRGDAARVDAAALRAAARPGPL 60
MGGTLSGPHPDRVHEALHLGGVQHGRQRPDEHAQRHVVHRGDAARVDAAALRAAARPGPL
Sbjct: 1 MGGTLSGPHPDRVHEALHLGGVQHGRQRPDEHAQRHVVHRGDAARVDAAALRAAARPGPL 60
Query: 61 GRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTP 120
GRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTP
Sbjct: 61 GRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTP 120
Query: 121 PRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAG 180
PRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAG
Sbjct: 121 PRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAG 180
Query: 181 RGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLK 240
RGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLK
Sbjct: 181 RGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLK 240
Query: 241 AEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAG 300
AEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAG
Sbjct: 241 AEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAG 300
Query: 301 QRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPSP 360
QRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPSP
Sbjct: 301 QRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPSP 360
Query: 361 PQLRVSKLPPHSRVPFLSECRL 382
PQLRVSKLPPHSRVPFLSECRL
Sbjct: 361 PQLRVSKLPPHSRVPFLSECRL 382
>gi|239757414 PREDICTED: hypothetical protein XP_002345432 [Homo
sapiens]
Length = 176
Score = 238 bits (607), Expect = 7e-63
Identities = 122/177 (68%), Positives = 128/177 (72%), Gaps = 2/177 (1%)
Query: 1 MGGTLSGPHPDRVHEALHLGGVQHGRQRPDEHAQRHVVHRGDAARVDAAALRAAARPGPL 60
MGGTLSGPHPDRVHEALHLGGVQHGRQRPDEHAQRHVVHRGDAARVDAAALRAAARPGPL
Sbjct: 1 MGGTLSGPHPDRVHEALHLGGVQHGRQRPDEHAQRHVVHRGDAARVDAAALRAAARPGPL 60
Query: 61 GRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTP 120
GRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGG + + P P
Sbjct: 61 GRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGGPCQGSARFSPDP 120
Query: 121 PRSGLDPAVPSPTPAPLARC-RQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQG 176
P P P + +R L G L+ P R G + PG G
Sbjct: 121 AAVRPQPRGPQPDSGSARQVPPDSRGAQALHRGAPLASPAPRGVRGV-ETPGRADSG 176
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 60.1 bits (144), Expect = 3e-09
Identities = 76/279 (27%), Positives = 105/279 (37%), Gaps = 53/279 (18%)
Query: 62 RPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTPP 121
R P+R P R + +R G+R P+ +G R GG + A P
Sbjct: 273 RSPSRLSPKHRDEGRKTGSQRSSGSRSPSPS-GGSGWGSPQRNGGSGQRSGAHGGRPGSA 331
Query: 122 RSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGR 181
S P PS +P+P R + A G+ SP R A S + + GR
Sbjct: 332 HS--PPDKPS-SPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGR----------GGR 378
Query: 182 GAGGARVTHRPGRLRPRGRGRGRARRTCPA-RRRGEEDLRVQDSCPQAGCRAMGQRRVLK 240
AGGA GR R R R R R+R + A RRRG R + + P+ R++ + R
Sbjct: 379 AAGGA------GRRRRRRRRRRRSRSSASAPRRRGRR--RPRPAPPRGSSRSLSRARSSS 430
Query: 241 AEGARARARGGVCFGPRPGMQKRSGG---------------------GSGGQRAG----- 274
G+ RG GP PG ++ GG G+ G+R G
Sbjct: 431 DSGS---GRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKS 487
Query: 275 -GWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRGSVGP 312
PGP R + + SR A +RP S P
Sbjct: 488 SSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSP 526
Score = 36.2 bits (82), Expect = 0.051
Identities = 65/267 (24%), Positives = 85/267 (31%), Gaps = 51/267 (19%)
Query: 3 GTLSGPHPDRVHEALHLGGVQHGRQRPDEHAQRHVVHRGDAARVDAAALRAAARPGPLGR 62
G SG H R G +P + R V AA R P P
Sbjct: 318 GQRSGAHGGRP------GSAHSPPDKPSSPSPR--VRDKAAAAAPTPPARGKESPSPRSA 369
Query: 63 PPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTPPR 122
P ++ + + RRRRR RR S R R R P PPR
Sbjct: 370 PSSQGRGGRAAGGAGRRRRRRRRRRR------------SRSSASAPRRRGRRRPRPAPPR 417
Query: 123 --------------SGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAAS---- 164
SG P P P P + G R + PP R AS
Sbjct: 418 GSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKR----AKERPPRARPASTSPS 473
Query: 165 -GEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRT-CPARRRGEEDLRVQ 222
G R GG +G+ + R G + R + R R +R P+R + +
Sbjct: 474 PGAHGRRGG-PEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSR 532
Query: 223 DSCPQAGCRAMGQRRVLKAEGARARAR 249
D + G+ R +AE RAR R
Sbjct: 533 DKDGE------GRARHSEAEATRARRR 553
Score = 29.6 bits (65), Expect = 4.7
Identities = 67/284 (23%), Positives = 96/284 (33%), Gaps = 66/284 (23%)
Query: 103 RPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPL-----ARCRQTRAGLRLS--TGGRL 155
RPGG A R++ P GL+ A P+ A C + G R +
Sbjct: 107 RPGGHIVAETPRLTEGAEP--GLEYAPFDDDDGPVDCDCPASCYRGHRGYRTKHWSSSSA 164
Query: 156 SPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRG 215
SPP ++ K+ GG HR R + R + P R++
Sbjct: 165 SPPPKKKK----KKKGG-----------------HRRSRKKRRLESECSCGSSSPLRKKK 203
Query: 216 EEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGMQKR-----SGGGSGG 270
+ + + +G R R R+R C +K+ S G
Sbjct: 204 KSVKKHRRDRSDSGSRRK----------RRHRSRSSKCKRKEKNKEKKRPHTESPGRRSH 253
Query: 271 QRAGGWQPGPSVRESCIDMAGRERPS---RGAGQRP--QRVRGSVGPWNLGSLGKKNKQE 325
+ + G PS+ D R S R G++ QR GS P G G + Q
Sbjct: 254 RHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQ- 312
Query: 326 TNRRGSSLRAAWSGRGRFRKVGTCPTPG----PPDAPSPPQLRV 365
R G S + + + GR PG PPD PS P RV
Sbjct: 313 --RNGGSGQRSGAHGGR---------PGSAHSPPDKPSSPSPRV 345
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 51.2 bits (121), Expect = 2e-06
Identities = 85/358 (23%), Positives = 131/358 (36%), Gaps = 49/358 (13%)
Query: 7 GPHPDRVHEALHLGGVQHGRQRPDEHAQRHVVHRGDAARVDAAA-------------LRA 53
G P R + G + R R + A +RG A+ AAA A
Sbjct: 120 GRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAA 179
Query: 54 AARPGPLGRPPTRAGPAQRSSCTQPHRRR---------RRGTRRLPPALTPAGPYHSARP 104
A G+ P R G R + R+R R G R+ PA +R
Sbjct: 180 AGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRR 239
Query: 105 GGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAAS 164
GGG + + R R G A + +R + R L+ RR A+
Sbjct: 240 GGGKKPQKQR-------RRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRRGAA 292
Query: 165 GEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRR---GEEDLRV 221
++P +G + GG G +PR RG+ + +R G++ V
Sbjct: 293 TAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAV 352
Query: 222 QDSCPQAGCRAMGQR-RVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQPGP 280
+ R G++ R KA A A++RGG G + G+++ G G++ WQ P
Sbjct: 353 VGVKSRKKQRRRGKKPRRQKASAAGAKSRGG---GDKKGLREAKRRGD-GRKKPRWQ-NP 407
Query: 281 SVRESCIDMAGRERPSRGAGQRPQRVRGSVGPWNLGSLGKKNK----QETNRRGSSLR 334
R A +P G ++P+R GP S G K++ ++ RRG R
Sbjct: 408 RRR---AQKAPAAKPRGGGSKKPRR----RGPKAAKSRGGKSRSGGGKKPRRRGQKAR 458
Score = 42.0 bits (97), Expect = 0.001
Identities = 84/318 (26%), Positives = 116/318 (36%), Gaps = 50/318 (15%)
Query: 40 RGDAARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGT--RRLPPALTPAG 97
+G A + A R AA G R G +S Q R R G RR T A
Sbjct: 277 QGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAA 336
Query: 98 PYHSARPGGGARARAARV---SPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGR 154
+ R GGG + +AA V S R G P R + + AG + S GG
Sbjct: 337 AAGTKR-GGGGQQKAAVVGVKSRKKQRRRGKKPR----------RQKASAAGAK-SRGGG 384
Query: 155 LSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCP--AR 212
LR A KR G G R R + +PRG G + RR P A+
Sbjct: 385 DKKGLREA-----KRRG---DGRKKPRWQNPRRRAQKAPAAKPRGGGSKKPRRRGPKAAK 436
Query: 213 RRGEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQR 272
RG + P R GQ+ KA A A +RG + G QK S G+ R
Sbjct: 437 SRGGKSRSGGGKKP----RRRGQKARQKAAEAGAESRGD----KKQGRQKASAAGT-KSR 487
Query: 273 AGG---------WQPGPSVRESCIDMAGRERPSRGAGQRPQRVRGSVGPWNLGSLGKKNK 323
GG W+ G + AG + + GA R ++ P G+ +
Sbjct: 488 GGGLKSHSGKNLWRRGQKA-----EAAGEKATAAGAKSRGRKQPRRQKPAVAGAKSRVGG 542
Query: 324 QETNRRGSSLRAAWSGRG 341
++ +R ++ A + G
Sbjct: 543 SKSRQRQKAVAAGATSHG 560
Score = 34.3 bits (77), Expect = 0.19
Identities = 65/310 (20%), Positives = 105/310 (33%), Gaps = 37/310 (11%)
Query: 20 GGVQHGRQRPDEHAQRHVVHRGDAARVDAAALRAAARPGPLGRPPTRAGPAQRS---SCT 76
G Q RQ+P + V + + A A G G +R G + T
Sbjct: 522 GRKQPRRQKPAVAGAKSRVGGSKSRQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQT 581
Query: 77 QPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTPPRSGLDPAVPSPTPAP 136
+ R G + P A +R G G + + + T +S P A
Sbjct: 582 AAAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGKKAWRQKAAGTGAKSRKKPWRRGQKDAA 641
Query: 137 LARCRQTRAGLRLSTGGRLSPPLRRAASGEW-----------------KRPGGLTQGEFA 179
A +GG+ + AA+G +R ++G+
Sbjct: 642 AAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAKSRGDGG 701
Query: 180 GRGAGGARVTHRPGRL----RPRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQ 235
A G R G+ + RG G ++R + A+ RG + + A ++ G
Sbjct: 702 QNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASKSHG- 760
Query: 236 RRVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQPGPSVRESCIDMAGRERP 295
GA+ R GG R G + + GG AGG +P P V+ GR +
Sbjct: 761 -----GGGAKRRRGGGA--KSRSGEKAVTAGGQKAAAAGGKKP-PRVK----SRGGRGQK 808
Query: 296 SRGAGQRPQR 305
+ G++P R
Sbjct: 809 AAAGGKKPLR 818
Score = 32.3 bits (72), Expect = 0.73
Identities = 32/113 (28%), Positives = 43/113 (38%), Gaps = 15/113 (13%)
Query: 224 SCPQAGCRAMG------QRRVLKAEGARARARG--GVCFGP--RPGMQKRSGGGSGGQRA 273
S AG + +G +R+ A G +AR RG G G R QK +G G R
Sbjct: 43 SAAAAGVKILGSGDKKLRRQKAAAGGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRG 102
Query: 274 GGWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRGSVGPWNL---GSLGKKNK 323
GG Q + + GR R R GQ+ W + G KN+
Sbjct: 103 GGEQKAAAAGTK--SLGGRGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNR 153
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 51.2 bits (121), Expect = 2e-06
Identities = 92/354 (25%), Positives = 109/354 (30%), Gaps = 68/354 (19%)
Query: 43 AARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSA 102
AA A A RAAA P GPAQ P R +R P PA P A
Sbjct: 141 AAAAPARAPRAAAAAATA---PPSPGPAQ------PGPRAQRAAPLAAPPPAPAAPPAVA 191
Query: 103 RPGGGARARAARVS--------PPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGR 154
P G RA V+ PP PP P P P P RAG G
Sbjct: 192 PPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAG-----GAA 246
Query: 155 LSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHR--PGRLRPRGRGRGRARRT---C 209
LR G G G R+T G L RGR RT
Sbjct: 247 RPVSLREVVR------------YLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGA 294
Query: 210 PARRRGEEDLRVQDSCPQAGCRAM--GQRRVLKAEGARARARGGVCFGPRPGMQKRSGGG 267
A RG+ R + R+ G+ RVL+ E +
Sbjct: 295 LALPRGDRPGRAPPAASARPSRSKRGGEERVLEKE-------------------EEEDDD 335
Query: 268 SGGQRAGGWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRGSVGPWNLGSLGKKNKQETN 327
G V ES AG + + PQ + V W G Q+
Sbjct: 336 EDEDEEDDVSEGSEVPESDRP-AGAQHHQLNGERGPQSAKERVKEWT--PCGPHQGQDEG 392
Query: 328 RR---GSSLRAAWSGRGRFRKVGTCPTPGPPDAPSPPQLRVSK--LPPHSRVPF 376
R GS R +S ++ GT PD+PSP L K LP PF
Sbjct: 393 RGPAPGSGTRQVFSMAAMNKEGGTASVATGPDSPSPVPLPPGKPALPGADGTPF 446
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 48.5 bits (114), Expect = 1e-05
Identities = 74/256 (28%), Positives = 93/256 (36%), Gaps = 54/256 (21%)
Query: 41 GDAARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYH 100
G RV AA AAA P GR P+ A P SS T+ R RR R L P H
Sbjct: 148 GRTRRVVAAPESAAAAP---GRSPSPADPGSTSSATRVPRARRSSRRALQPR-------H 197
Query: 101 SARPGGGARARAARVSPPTPPRSGLDPAVPSP-TPAPLARCRQTRAG------------- 146
+A GA +R+ S TPP + PA P P L+R RQ G
Sbjct: 198 AAPDAPGAPSRS--TSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDV 255
Query: 147 -LRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRP-GRLRPRGR---- 200
L L G + P + + E + T GE GR + H P RL P
Sbjct: 256 TLSLERGPASAKPPPQVLTAEPREDA--TPGE--GRLPDFEKQPHSPRERLDPPPAPFGQ 311
Query: 201 ---------GRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGG 251
GRG R G +L P C + Q+ + +R R
Sbjct: 312 MILILGFRVGRGGTGSWSWRRGAGSAEL------PGCSCAQLAQQLARAGKSTESRNR-- 363
Query: 252 VCFGPRPGMQKRSGGG 267
G R G++ R GGG
Sbjct: 364 -LNGRRGGVEARGGGG 378
Score = 34.3 bits (77), Expect = 0.19
Identities = 60/227 (26%), Positives = 75/227 (33%), Gaps = 47/227 (20%)
Query: 103 RPGGGARARAARVSPPT---PPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPL 159
+PG G A R + P PP G+ P + TP P A GR+SPP
Sbjct: 67 QPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTP-PFAP-------------GRISPPA 112
Query: 160 RRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARR---------TCP 210
+A + + P + G GG + RP GRG GR RR P
Sbjct: 113 PQAFLAQ-RSPARASPG-------GGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAP 164
Query: 211 ARRRGEEDLRVQDSCPQAGCRAMGQRRVLK-------AEGARARARGGVCFGPRPGM--Q 261
R D S + RR L+ A GA +R+ P P
Sbjct: 165 GRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPAS 224
Query: 262 KRSGG----GSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAGQRPQ 304
+R G QR G PSV S ER A PQ
Sbjct: 225 RRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQ 271
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 48.5 bits (114), Expect = 1e-05
Identities = 74/256 (28%), Positives = 93/256 (36%), Gaps = 54/256 (21%)
Query: 41 GDAARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYH 100
G RV AA AAA P GR P+ A P SS T+ R RR R L P H
Sbjct: 148 GRTRRVVAAPESAAAAP---GRSPSPADPGSTSSATRVPRARRSSRRALQPR-------H 197
Query: 101 SARPGGGARARAARVSPPTPPRSGLDPAVPSP-TPAPLARCRQTRAG------------- 146
+A GA +R+ S TPP + PA P P L+R RQ G
Sbjct: 198 AAPDAPGAPSRS--TSQATPPPAPRFPASRRPGAPRLLSRTRQRELGGSAAPSVAFSGDV 255
Query: 147 -LRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRP-GRLRPRGR---- 200
L L G + P + + E + T GE GR + H P RL P
Sbjct: 256 TLSLERGPASAKPPPQVLTAEPREDA--TPGE--GRLPDFEKQPHSPRERLDPPPAPFGQ 311
Query: 201 ---------GRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGG 251
GRG R G +L P C + Q+ + +R R
Sbjct: 312 MILILGFRVGRGGTGSWSWRRGAGSAEL------PGCSCAQLAQQLARAGKSTESRNR-- 363
Query: 252 VCFGPRPGMQKRSGGG 267
G R G++ R GGG
Sbjct: 364 -LNGRRGGVEARGGGG 378
Score = 34.3 bits (77), Expect = 0.19
Identities = 60/227 (26%), Positives = 75/227 (33%), Gaps = 47/227 (20%)
Query: 103 RPGGGARARAARVSPPT---PPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPL 159
+PG G A R + P PP G+ P + TP P A GR+SPP
Sbjct: 67 QPGRGKSCGARRAALPLLRYPPEPGVFPFLVLWTP-PFAP-------------GRISPPA 112
Query: 160 RRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARR---------TCP 210
+A + + P + G GG + RP GRG GR RR P
Sbjct: 113 PQAFLAQ-RSPARASPG-------GGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAP 164
Query: 211 ARRRGEEDLRVQDSCPQAGCRAMGQRRVLK-------AEGARARARGGVCFGPRPGM--Q 261
R D S + RR L+ A GA +R+ P P
Sbjct: 165 GRSPSPADPGSTSSATRVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPAS 224
Query: 262 KRSGG----GSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAGQRPQ 304
+R G QR G PSV S ER A PQ
Sbjct: 225 RRPGAPRLLSRTRQRELGGSAAPSVAFSGDVTLSLERGPASAKPPPQ 271
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 48.5 bits (114), Expect = 1e-05
Identities = 77/302 (25%), Positives = 103/302 (34%), Gaps = 55/302 (18%)
Query: 52 RAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARAR 111
R +R P + +R P +RSS + P R+ R R+R
Sbjct: 1669 RRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSR--------------------RSR 1708
Query: 112 AARVSPPT----PPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEW 167
+A SP T PPR P+V SP PA +R + R R ++ R RR S
Sbjct: 1709 SASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRR---RSASSPRTKTTSRRGRSPS- 1764
Query: 168 KRPGGLTQGEFAGRGAGGARVTHRPGR-----LRPRGRGRGRARRTCPARRRGEEDLRVQ 222
+P GL + R R T R R R R R R+R RRRG +
Sbjct: 1765 PKPRGLQRSRSRSR-REKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSR 1823
Query: 223 DSCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQPGPSV 282
Q R +RR R R+R P +KRS + P P
Sbjct: 1824 SPARQESSRTSSRRR-------RGRSR------TPPTSRKRSRSRT--------SPAPWK 1862
Query: 283 RESCIDMAGRERPSRGAGQRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGR 342
R R SR R R + +++ RR S RA+ R R
Sbjct: 1863 RSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRR 1922
Query: 343 FR 344
R
Sbjct: 1923 SR 1924
Score = 45.4 bits (106), Expect = 8e-05
Identities = 88/357 (24%), Positives = 122/357 (34%), Gaps = 40/357 (11%)
Query: 23 QHGRQRPDEHAQRHVVHRGDAARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRR 82
+ GR A R AR + R AR R PTR R+ + R
Sbjct: 558 RRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRS 617
Query: 83 RRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQ 142
R RR +P +R AR R+ R TP R G S TPA R R
Sbjct: 618 RTPARRRSRTRSPV--RRRSRSRSPAR-RSGRSRSRTPARRGRS---RSRTPARRGRSR- 670
Query: 143 TRAGLRLSTGGRLSPPLRRAAS-GEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRG 201
+R R S R P RR S R G RG +R R GR G
Sbjct: 671 SRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGR---SGSS 727
Query: 202 RGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGMQ 261
R ++ ++RR +S P+ + RR R++A+ R ++
Sbjct: 728 SERKNKSRTSQRRSR-----SNSSPEMKKSRISSRRSRSLSSPRSKAKS------RLSLR 776
Query: 262 KRSGGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRGSVGPWNLGSLGKK 321
+ G S + P R +G +P + P+R R S P K
Sbjct: 777 RSLSGSSPCPKQKSQTPPRRSR------SGSSQPKAKSRTPPRRSRSSSSP------PPK 824
Query: 322 NKQETNRRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPSPPQLRVSKLPPHSRVPFLS 378
K +T R S ++ + K GT P G + + PQ + P R F S
Sbjct: 825 QKSKTPSRQSHSSSSPHPK---VKSGTPPRQG---SITSPQANEQSVTPQRRSCFES 875
Score = 42.7 bits (99), Expect = 5e-04
Identities = 71/279 (25%), Positives = 92/279 (32%), Gaps = 30/279 (10%)
Query: 73 SSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTPPRSGLDPAVPSP 132
SS T +R R R + TP S R G R+R SP T R P+
Sbjct: 455 SSPTSKNRSHGRAKRDKSHSHTP-----SRRMG---RSR----SPATAKRGRSRSRTPTK 502
Query: 133 TPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRP 192
+R Q R GR P RR S +RPG RG + R
Sbjct: 503 RGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRS 562
Query: 193 GRLRPRGRG---------RGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLKAEG 243
P RG RGR+R PARRR + G+ R
Sbjct: 563 HSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPAR 622
Query: 244 ARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAGQRP 303
R+R R V ++RS S +R+G + R R R + P
Sbjct: 623 RRSRTRSPV--------RRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTP 674
Query: 304 QRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGR 342
R G G +++ T RRG S + RGR
Sbjct: 675 ARRSGRSRSRTPARRG-RSRSRTPRRGRSRSRSLVRRGR 712
Score = 32.7 bits (73), Expect = 0.56
Identities = 70/304 (23%), Positives = 107/304 (35%), Gaps = 35/304 (11%)
Query: 57 PGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVS 116
P P R P+ P + C P R R + P G ++ + S
Sbjct: 1493 PRPRSRSPS--SPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPS 1550
Query: 117 PPTPPRSGLD--PAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLT 174
RS D P + T PL + ++ + + + RLSP RR+ SG P
Sbjct: 1551 ASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSP--RRSRSG--SSPEVKD 1606
Query: 175 QGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRG--EEDLRVQDSCPQAGCRA 232
+ A R G+ + P PR R R+R ++ RG E +S P+ ++
Sbjct: 1607 KPRAAPRAQSGSDSSPEPKAPAPRALPR-RSRSGSSSKGRGPSPEGSSSTESSPEHPPKS 1665
Query: 233 MGQRRVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQPGPSVRESCIDMAGR 292
RR G+R+ P P + R+ R+ P + A
Sbjct: 1666 RTARR-----GSRS--------SPEPKTKSRTPPRRRSSRS-----SPELTRK----ARL 1703
Query: 293 ERPSRGAGQRPQ-RVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGR-FRKVGTCP 350
R SR A P+ R R S+ E +R R+A S R + + G P
Sbjct: 1704 SRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSP 1763
Query: 351 TPGP 354
+P P
Sbjct: 1764 SPKP 1767
Score = 32.3 bits (72), Expect = 0.73
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Query: 60 LGRPPTRAGPAQRSSCT--QPHRRRRRGTRRLPPALTPAGPYHSARPG---GGARARAAR 114
+G PP G Q S+ QP + RR + + + + S+ G + + +
Sbjct: 2506 VGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEG 2565
Query: 115 VSPPTPPRSGLDPAVPSPTPAPLARCRQTR 144
S P P L VPSPTPAP R+ R
Sbjct: 2566 SSLPVQPEVALK-RVPSPTPAPKEAVREGR 2594
Score = 28.9 bits (63), Expect = 8.1
Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 25/115 (21%)
Query: 52 RAAARPGPLGRPPTRAG----PAQRSSCTQPHRRRRRGTRRLPP------ALTPAGPYHS 101
R+ +R P R +R+ P +RS P RRR R P +LT + P
Sbjct: 2017 RSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIR 2076
Query: 102 ARPGGGARARAARVSPPTPPRS---GLDPAV------------PSPTPAPLARCR 141
R G+ + +R + P R+ P V PS +P PL RCR
Sbjct: 2077 RRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPLDRCR 2131
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 48.1 bits (113), Expect = 1e-05
Identities = 73/261 (27%), Positives = 81/261 (31%), Gaps = 36/261 (13%)
Query: 84 RGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTPPRSGLDP---------------A 128
+G + PP P GP G G + PP PPR G DP
Sbjct: 638 KGMQHFPPG--PGGPMPGPHGGPGGPVGPRLLGPPPPPRGG-DPFWDGPGDPMRGGPMRG 694
Query: 129 VPSPTPAPLARCRQTRAG---------LRLSTGGRL--SPPLRRAASGEWKRPGGLTQGE 177
P P P P R R R G R + GGR PP R G GG +
Sbjct: 695 GPGPGPGPYHRGRGGRGGNEPPPPPPPFRGARGGRSGGGPPNGRGGPGGGMVGGGGHRPH 754
Query: 178 FAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRR 237
G G HRP G G G P G P G R
Sbjct: 755 EGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRPHEGPGGGISGGSGHR 814
Query: 238 VLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQR--AGGWQPGPSVRESCIDMAGRERP 295
+ G A GG PG S GGSGG R G GP D+ G R
Sbjct: 815 PHEGPGGGMGAGGGHRPHEGPG---GSMGGSGGHRPHEGPGHGGPHGHRP-HDVPG-HRG 869
Query: 296 SRGAGQRPQRVRGSVGPWNLG 316
G P RG GP + G
Sbjct: 870 HDHRGPPPHEHRGHDGPGHGG 890
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 48.1 bits (113), Expect = 1e-05
Identities = 102/374 (27%), Positives = 136/374 (36%), Gaps = 76/374 (20%)
Query: 20 GGVQHGRQRPDE----HAQRHVVHRGDAARVDAAALRA-AARPGPLGRP-PTRAGPAQRS 73
G +GR P E +A GDA+ + A AA P P PT G A
Sbjct: 142 GSSSYGRLGPSEPRGIYASERPKSLGDASPSAPEVVGARAAVPRSFSAPYPTAGGSAGPE 201
Query: 74 SCTQPHRRRRRGTRRLPPALTPAGPYH-----SARPGGGARARAARVSPPT--PPRSGLD 126
+C+ RR R G P LTP+ P H S RP G PPT P G
Sbjct: 202 ACSSAERRARAG-----PFLTPS-PLHAVAMRSPRPCG---------RPPTDSPDAGGAG 246
Query: 127 PAVPSPTPAPLARCRQTRAGL-RLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGG 185
+ A L R R+ AG R S GG P RR S + P A G
Sbjct: 247 RPLDGYISALLRRRRRRGAGQPRTSPGGADGGP-RRQNSVRQRPPD-------ASPSPGS 298
Query: 186 ARVTHRPGRLRPRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCR---AMGQRRVLKAE 242
AR P R G A + E + + + P A + + R++KA+
Sbjct: 299 ARPAREPSLERVGGHPTSPAALSRAWASSWESEAAPEPAAPPAAPSPPDSPAEGRLVKAQ 358
Query: 243 ---GARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQPGPSVRESCIDMA-GRERPSRG 298
GA+A RG PG RA +P P R ++ + RERP R
Sbjct: 359 YIPGAQAATRG------LPG------------RAARRKPPPLTRGRSVEQSPPRERP-RA 399
Query: 299 AGQRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTPGPP--- 355
AG+R + S G++ R+ S ++ S GR V + P P
Sbjct: 400 AGRRGRMAEAS---------GRRGSPRA-RKASRSQSETSLLGRASAVPSGPPKYPTAER 449
Query: 356 DAPSPPQLRVSKLP 369
+ P PP+ R P
Sbjct: 450 EEPRPPRPRRGPAP 463
Score = 47.4 bits (111), Expect = 2e-05
Identities = 98/338 (28%), Positives = 125/338 (36%), Gaps = 67/338 (19%)
Query: 48 AAALRAAARPGPLGRPPTR---AGPAQRSS----CTQPHRRRRRGTRRLPPALTPAGPYH 100
A A+R+ P P GRPPT AG A R RRRRRG + P +P G
Sbjct: 223 AVAMRS---PRPCGRPPTDSPDAGGAGRPLDGYISALLRRRRRRGAGQ--PRTSPGGA-- 275
Query: 101 SARPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPP-L 159
GG R + R PP A PSP A AR L G SP L
Sbjct: 276 ---DGGPRRQNSVRQRPPD--------ASPSPGSARPAR----EPSLERVGGHPTSPAAL 320
Query: 160 RRAASGEWKR---------PGGLTQGEFAGRGAGGARVTHRPG-RLRPRGRGRGRARRTC 209
RA + W+ P + + G + + PG + RG ARR
Sbjct: 321 SRAWASSWESEAAPEPAAPPAAPSPPDSPAEGRL-VKAQYIPGAQAATRGLPGRAARRKP 379
Query: 210 PARRRGEEDLRVQDSCPQAGCRAMGQR-RVLKAEGARARARGGVCFGPRPGMQKRSGGGS 268
P RG V+ S P+ RA G+R R+ +A G R R R + +S
Sbjct: 380 PPLTRGRS---VEQSPPRERPRAAGRRGRMAEASGRRGSPRA------RKASRSQSETSL 430
Query: 269 GGQRAGGWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRGSVGPWNLGSLGKKNKQETNR 328
G RA GP + A RE P RP R R P +L + R
Sbjct: 431 LG-RASAVPSGPPKYPT----AEREEP------RPPRPRRGPAP----TLAAQAAGSCRR 475
Query: 329 -RGSSLRAAWSGRGRFRKVGTCPTPGPPDAPSPPQLRV 365
R ++ A GR + PGP +PS PQ R+
Sbjct: 476 WRSTAEIDAADGRRVRPRAPAARVPGPGPSPSAPQRRL 513
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 47.4 bits (111), Expect = 2e-05
Identities = 55/176 (31%), Positives = 70/176 (39%), Gaps = 27/176 (15%)
Query: 58 GPLGRPPTRAGPAQ---RSSCTQPHRRRRRGTR-RLPPALTPAGPYHSARPGGGARARAA 113
G + PP A PA+ R P RR R TR + P++ P + R GG R R
Sbjct: 61 GAVPSPPAAAHPARPALRGETPAPGRRGRATTRGEVQPSVRPPLSHRPLRGGGMGRGRPG 120
Query: 114 RVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGG----RLSPPLRRAASGEWKR 169
+ PP P R L PA P L+ A GG R SPP+ RAA +W
Sbjct: 121 KGPPPNPSRR-LPPAPPGGRRTWLSALATGPA-----AGGAGRRRRSPPVFRAA--DW-- 170
Query: 170 PGGLTQGEFAGRGAG---GARVTHRPGRLRPRGR----GRGRARRTCPARRRGEED 218
G + E RG ++H+P LR G RG R P +G D
Sbjct: 171 --GFGRSEQHLRGLTLIISCTLSHKPASLRRSGTQAWGPRGLPLRATPESFKGSPD 224
Score = 44.3 bits (103), Expect = 2e-04
Identities = 54/186 (29%), Positives = 68/186 (36%), Gaps = 39/186 (20%)
Query: 66 RAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSAR---------PGGGARARAARVS 116
R P Q+ + R R + R P TPA P S R PG A +
Sbjct: 3 RKRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRPPLCAPRPAPGRAQSPVPAAGA 62
Query: 117 PPTPPRSG--LDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLT 174
P+PP + PA+ TPAP R R T T G + P +R S R GG+
Sbjct: 63 VPSPPAAAHPARPALRGETPAPGRRGRAT-------TRGEVQPSVRPPLSHRPLRGGGMG 115
Query: 175 QGEFAGRG-------------AGGARVTHRPGRLRPRGRGRGRARRTCPARR-------R 214
+G G+G GG R P G GR RR+ P R R
Sbjct: 116 RGR-PGKGPPPNPSRRLPPAPPGGRRTWLSALATGPAAGGAGRRRRSPPVFRAADWGFGR 174
Query: 215 GEEDLR 220
E+ LR
Sbjct: 175 SEQHLR 180
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 47.4 bits (111), Expect = 2e-05
Identities = 48/176 (27%), Positives = 65/176 (36%), Gaps = 29/176 (16%)
Query: 56 RPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPG-----GGARA 110
+P P PP + P Q QPH++++ PP + P + PG G A
Sbjct: 71 QPPPQQPPPQQPPPHQPPPHPQPHQQQQPP----PPPQDSSKPVVAQGPGPAPGVGSAPP 126
Query: 111 RAARVSPPTPPRSGLDP-AVPSPTPAPLARCRQTRAGLRLST-------------GGRLS 156
++ P TPP SG P + P PTP P G T GG
Sbjct: 127 ASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPP 186
Query: 157 PPLRRAASGEWKR----PGGLTQGEFAG--RGAGGARVTHRPGRLRPRGRGRGRAR 206
PP G + PGG G+ G + GG ++ G +P RG G R
Sbjct: 187 PPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPR 242
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 47.4 bits (111), Expect = 2e-05
Identities = 84/343 (24%), Positives = 117/343 (34%), Gaps = 56/343 (16%)
Query: 52 RAAARPGPLGRPPTRAGPAQR----SSCTQPHRR---RRRGT--RRLPPALTPAGPYHSA 102
R+ +R R P+ P +R S P RR RRR + RR PP P P H
Sbjct: 281 RSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRR 340
Query: 103 RPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARC----RQTRAGLRLSTGGRLSPP 158
R R + S S SP P R R+TR RLS SPP
Sbjct: 341 SRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTR---RLSPSA--SPP 395
Query: 159 LRRAASGEWKRPGGLTQGEFAGRGAG---GARVTHRPGRLRPR-GRGRGRARRTCPARRR 214
RR P T+ + + +RV+ PGR + + +G +R P+
Sbjct: 396 RRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAP 455
Query: 215 GEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQRAG 274
+ + +S G + V + R R Q S GS
Sbjct: 456 KPRKVELSESEEDKGGKMAAADSVQQRRQYR-----------RQNQQSSSDSGSSSSSED 504
Query: 275 GWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLR 334
V+ + R PSR A P +K ++ET+ RG R
Sbjct: 505 ERPKRSHVKNGEVGRRRRHSPSRSASPSP----------------RKRQKETSPRGRRRR 548
Query: 335 AAWSGRGRFRKVGTCPTPGPPD----APSPPQLRVSKLPPHSR 373
+ R R+ P+P PP P+PP R + PP R
Sbjct: 549 SPSPPPTRRRR---SPSPAPPPRRRRTPTPPPRRRTPSPPPRR 588
Score = 43.9 bits (102), Expect = 2e-04
Identities = 88/391 (22%), Positives = 131/391 (33%), Gaps = 55/391 (14%)
Query: 23 QHGRQRPDEHAQRHVVHRGDAARVDAAALRAAARP-GPLGRPPTRAGPAQR-----SSCT 76
+H R R +R R A+ +++ +++R P +PP R R S
Sbjct: 337 RHRRSRSPVRRRR----RSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSA 392
Query: 77 QPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTPPRSGL------DPAVP 130
P RRR R + PPA P HS P R R +RVS SG
Sbjct: 393 SPPRRRHRPS---PPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRE 449
Query: 131 SPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTH 190
SP+PAP R + + GG+++ +++R Q + G+ +
Sbjct: 450 SPSPAPKPR-KVELSESEEDKGGKMAAADSVQQRRQYRRQ---NQQSSSDSGSSSSSEDE 505
Query: 191 RPGRLRPRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMG------QRRVLKAEGA 244
RP R + GR RR P+R + Q G R +RR +
Sbjct: 506 RPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAP 565
Query: 245 RARARGGVCFGPR-------------------PGMQKRSGGGSGGQRAGGWQPGPSVRES 285
R R PR P +Q+R +R P P R +
Sbjct: 566 PPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRA 625
Query: 286 CIDMAGRERPS-------RGAGQRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWS 338
+ R S R + +R GS ++ +E + R + S
Sbjct: 626 SPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPS 685
Query: 339 GRGRFRKVGTCPTPGPPDAPSPPQLRVSKLP 369
R R + + P P A S PQ R S P
Sbjct: 686 PRPRAPQTSSSPPPVRRGASSSPQRRQSPSP 716
Score = 43.9 bits (102), Expect = 2e-04
Identities = 86/369 (23%), Positives = 117/369 (31%), Gaps = 58/369 (15%)
Query: 5 LSGPHPDRVHEALHLGGVQHGRQRPDEHAQRHVVHRGDAARVDAAALRAAARPGPLGRPP 64
LS D+ + VQ RQ ++ Q ++ D R+ + G +GR
Sbjct: 462 LSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGR-- 519
Query: 65 TRAGPAQRSSCTQPHRRRR----RGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTP 120
R RS+ P +R++ RG RR P+ P S P R R PTP
Sbjct: 520 RRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRT----PTP 575
Query: 121 PRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAG 180
P P+ P +P R R S PP RR AS P + +
Sbjct: 576 PPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPS---PPPKRRTAS-----PPPPPKRRASP 627
Query: 181 RGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLK 240
RV+H P P+ R +R P+ + S P R + K
Sbjct: 628 SPPPKRRVSHSP---PPKQRSSPVTKRRSPSLSSKHR----KGSSPSRSTREARSPQPNK 680
Query: 241 AEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAG 300
R R P + R G S QR P PS RP R
Sbjct: 681 RHSPSPRPRAPQTSSSPPPV--RRGASSSPQRR--QSPSPST-----------RPIRRVS 725
Query: 301 QRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPSP 360
+ P+ P + + Q R SS R V P P P+P
Sbjct: 726 RTPE-------PKKIKKAASPSPQSVRRVSSS-----------RSVSGSPEPAAKKPPAP 767
Query: 361 PQLRVSKLP 369
P S+ P
Sbjct: 768 PSPVQSQSP 776
Score = 37.7 bits (86), Expect = 0.017
Identities = 84/336 (25%), Positives = 111/336 (33%), Gaps = 59/336 (17%)
Query: 56 RPGPLGRPPTRAGPAQRS-SCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAAR 114
RP R +R+ RS S T+P RR R +R P P S R R R
Sbjct: 275 RPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRP-----SPRRRPSPRRR--- 326
Query: 115 VSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLT 174
TPPR P + +P+ R R++ A L +G S R+ S K P
Sbjct: 327 ----TPPRRMPPPPRHRRSRSPVRRRRRSSASL---SGSSSSSSSSRSRSPPKKPPK--- 376
Query: 175 QGEFAGRGAGGARVTHR--PGRLRPRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRA 232
R + R T R P PR R R T P + R PQ R
Sbjct: 377 ------RTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTR-------HSPTPQQSNRT 423
Query: 233 MGQR----------RVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGG---WQPG 279
R +V K +G R PR S GG+ A Q
Sbjct: 424 RKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRR 483
Query: 280 PSVRESCIDMAGRERPSRGAGQRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSG 339
R++ + S +RP+R KN + RR S + S
Sbjct: 484 QYRRQNQQSSSDSGSSSSSEDERPKRSH------------VKNGEVGRRRRHSPSRSASP 531
Query: 340 RGRFRKVGTCPTPGPPDAPSPPQLRVSKLPPHSRVP 375
R R+ T P +PSPP R + P + P
Sbjct: 532 SPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPP 567
Score = 30.0 bits (66), Expect = 3.6
Identities = 39/158 (24%), Positives = 54/158 (34%), Gaps = 23/158 (14%)
Query: 71 QRSSCTQPHRRRRRGT---RRLPPALTPAGPYHSARPGGGARARAARVSPPTPPRSGLDP 127
+R P RR+ R RR P HS P ++R+ P P + P
Sbjct: 165 KRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPS---PAPEKKEKTP 221
Query: 128 AVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGG-----------LTQG 176
+P P+ + ++ ST L P + E K P T+
Sbjct: 222 ELPEPS----VKVKEPSVQEATSTSDILKVP-KPEPIPEPKEPSPEKNSKKEKEKEKTRP 276
Query: 177 EFAGRGAGGARVTHR-PGRLRPRGRGRGRARRTCPARR 213
R +R R P RPR R R R+R P RR
Sbjct: 277 RSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRR 314
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 47.0 bits (110), Expect = 3e-05
Identities = 35/107 (32%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 34 QRHVVHRGDAARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPAL 93
+RH G + A RAAA GP G PP P + P RR PP
Sbjct: 361 ERHFRFNGAGGGIGAPRRRAAALSGPWGSPP----PPPEQIHSAPGPRRPAPALLAPPTF 416
Query: 94 TPAGPYHS--ARPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLA 138
P + RPG + PPTPP + L P PTP P+A
Sbjct: 417 IFPAPTNGEPMRPGPPGLQELPPLPPPTPPPT-LQPPALQPTPLPVA 462
Score = 38.9 bits (89), Expect = 0.008
Identities = 84/379 (22%), Positives = 118/379 (31%), Gaps = 65/379 (17%)
Query: 56 RPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYH----SARPGGGARAR 111
RP P+ PP A ++ PA TP ++ G G
Sbjct: 79 RPSPVMPPPEEAAAVSAPPPAPAGTLLPGPSKWQKPAGTPVPRIRRLLEASHRGQGDPPS 138
Query: 112 AARVSPPTPPRS----GLDPAVPSPTPAPLARCRQTRA--GLRLSTGGRLSPPLRRAASG 165
+ PP PPR P PS P PL + R R++P L AS
Sbjct: 139 LRPLKPPPPPRQLSVKDTVPRAPSQFPPPLETWKPPPPLPSERQPADRRITPALATPASP 198
Query: 166 EWKRPGG-LTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEEDLRVQDS 224
+ G QG+ AGR GGA G + C + L
Sbjct: 199 PTESQAGPRNQGQTAGRARGGAPPHAGEGEMAQPADSESGLSLLCKITFKSRPSL----- 253
Query: 225 CPQAGCRAMGQRRVLKAEGARA--RARGGVCF------GPRP------------GMQKRS 264
P A ++ + L G A G + + GP P G Q+
Sbjct: 254 APPAASSSLAAKASLGGGGGGGLFAASGAISYAEVLKQGPLPPGAARPLGEVSRGAQEAE 313
Query: 265 GGGSGGQRAGGWQPGPSVRESCID----------------MAGRERPSR---------GA 299
GG G+ G P+ + + ++ + P R G
Sbjct: 314 GGDGDGEGCSGPPSAPASQARALPPPPYTTFPGSKPKFDWVSAPDGPERHFRFNGAGGGI 373
Query: 300 GQRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPS 359
G +R GPW GS +Q + G R A + + PT G P P
Sbjct: 374 GAPRRRAAALSGPW--GSPPPPPEQIHSAPGPR-RPAPALLAPPTFIFPAPTNGEPMRPG 430
Query: 360 PPQLR-VSKLPPHSRVPFL 377
PP L+ + LPP + P L
Sbjct: 431 PPGLQELPPLPPPTPPPTL 449
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 46.6 bits (109), Expect = 4e-05
Identities = 74/229 (32%), Positives = 88/229 (38%), Gaps = 33/229 (14%)
Query: 103 RPGGGARARAARVSPPTPP-RSGLDPAVPSPTPAP--LARCRQTRAGLRLSTGGRLSP-P 158
RP G A A P +P R P P P P P +R + RAGLR G +SP P
Sbjct: 47 RPRGAVSAGA----PGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGLR--PGAFVSPGP 100
Query: 159 LRRAA--SGEWKRPGGL--TQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRR 214
L R A SG G L + + GG P LR G R P R
Sbjct: 101 LGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPPRASPGGRP 160
Query: 215 GEE---------DLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGMQKRSG 265
G E RV G +G R K + + ARG P PG+ +
Sbjct: 161 GSEARGRSGAECARRVPLHHGPPGASGVGSERDRKFQLHQTPARG----PPFPGISGMTR 216
Query: 266 GG---SGGQRAGGWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRGSVG 311
G SG R W PG S S + AG ERP+R A +RP R G G
Sbjct: 217 GPVVLSGVNRQHRWPPGASPSRS-LGEAGGERPAR-ALRRP-RAPGRAG 262
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 46.6 bits (109), Expect = 4e-05
Identities = 74/229 (32%), Positives = 88/229 (38%), Gaps = 33/229 (14%)
Query: 103 RPGGGARARAARVSPPTPP-RSGLDPAVPSPTPAP--LARCRQTRAGLRLSTGGRLSP-P 158
RP G A A P +P R P P P P P +R + RAGLR G +SP P
Sbjct: 47 RPRGAVSAGA----PGSPLYRVSAPPPAPPPPPPPGGPSRSERPRAGLR--PGAFVSPGP 100
Query: 159 LRRAA--SGEWKRPGGL--TQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRR 214
L R A SG G L + + GG P LR G R P R
Sbjct: 101 LGRRASCSGRAGSAGRLRCSAAALSAAQRGGPARAQVPPALRTFSPGPASPPRASPGGRP 160
Query: 215 GEE---------DLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGMQKRSG 265
G E RV G +G R K + + ARG P PG+ +
Sbjct: 161 GSEARGRSGAECARRVPLHHGPPGASGVGSERDRKFQLHQTPARG----PPFPGISGMTR 216
Query: 266 GG---SGGQRAGGWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRGSVG 311
G SG R W PG S S + AG ERP+R A +RP R G G
Sbjct: 217 GPVVLSGVNRQHRWPPGASPSRS-LGEAGGERPAR-ALRRP-RAPGRAG 262
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 46.2 bits (108), Expect = 5e-05
Identities = 84/296 (28%), Positives = 105/296 (35%), Gaps = 72/296 (24%)
Query: 86 TRRLPPALTPAGPY-HSAR-----PGGGARARAARVSPPTPPRSGLDPAVPS-PTPAPLA 138
TRR +TP+ P HS R P G RA V R PA P P AP
Sbjct: 396 TRRF---VTPSEPVAHSRRGRLHLPRGRRSRRAVSVPASFFRRLAPSPARPRHPAEAP-- 450
Query: 139 RCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPR 198
+ G RLS + + SG + G QG+ G+GG + P
Sbjct: 451 -----------NNGARLSSEVSGSGSGNFGEEGN-PQGKEDQEGSGG---DYMPMNNWGS 495
Query: 199 GRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGG-VCFGPR 257
G GRG G + GQ G+ + + GG C G
Sbjct: 496 GNGRGSG----------------------GGQGSNGQ-------GSSSHSSGGNQCSGE- 525
Query: 258 PGMQKRSGGGSGGQRAGGWQPGPSVRESC--IDMAGRERPS----RGAGQRPQRVRGSVG 311
G R G GS GQ +GG Q + + G +RP G GQ P GS G
Sbjct: 526 -GQGSRGGQGSNGQGSGGNQCSRDGQGTAGGHGSGGGQRPGGGHGSGGGQGPGDGHGSGG 584
Query: 312 PWNLGSLGK-----KNKQETNRRGSSLRA-AWSGRGRFRKVGTCPTPGPPDAPSPP 361
N G GK K RG SL+ ++ G+ K P P PP P PP
Sbjct: 585 GKNSGG-GKGSGSGKGSDGDGERGKSLKKRSYFGKLTQSKQQQMPPPPPPPPPPPP 639
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 46.2 bits (108), Expect = 5e-05
Identities = 75/278 (26%), Positives = 101/278 (36%), Gaps = 31/278 (11%)
Query: 88 RLPPALTPAGPYHSARPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGL 147
+L + P A+P A R S P+ G +PT AP++ R R L
Sbjct: 20 QLSHRILPQDGIKRAQPPPHTPATGTRSSYRLLPQKGRGNLRGAPT-APVSFSRIRRNPL 78
Query: 148 RLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRP-----------GRLR 196
R G SPP R + P G R AGG R + RP GRLR
Sbjct: 79 RTQLSG--SPPRRPTSVLRLASPAGDLPRRPRPR-AGGGRHSPRPAVGTIFRGGRKGRLR 135
Query: 197 PRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFGP 256
GRG R + R G RV+ G G + G + R GV
Sbjct: 136 ---EGRGAVRGSGKRRGWGLRPQRVRSRLAGLGA-PRGGAAAPRGWGGQGAERLGV---H 188
Query: 257 RPGMQKRSG--GGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRGSVGPWN 314
+PG+ + GG GG GG PS + +GR RP R R+ GS +
Sbjct: 189 QPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRR------TRLLGS-AERH 241
Query: 315 LGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTP 352
G + +R +++R + GRG V P
Sbjct: 242 TGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARP 279
Score = 45.1 bits (105), Expect = 1e-04
Identities = 69/234 (29%), Positives = 83/234 (35%), Gaps = 34/234 (14%)
Query: 5 LSGPHPDRVHEALHLG---GVQHGRQRPDEHAQRH-------VVHRGDAA---RVDAAAL 51
LSG P R L L G R RP RH + RG R A+
Sbjct: 82 LSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGAV 141
Query: 52 RAAARPGPLGRPPTRAGP------AQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSA-RP 104
R + + G P R A R P +G RL P P H+A R
Sbjct: 142 RGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLG-VHQPGLPTHAALRG 200
Query: 105 GGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAAS 164
GGG + P+PPR+ PS P P R+TR L + R + A
Sbjct: 201 GGGGSEGGGGGARPSPPRA---RQPPSGRPRP----RRTRL---LGSAERHTGRAALARH 250
Query: 165 GEWKRPGGLTQGEFAGRGAG-GARVTHRPGRLRPRG--RGRGRARRTCPARRRG 215
G+ RP + GRGA RP R RG R GRAR C R G
Sbjct: 251 GQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAG 304
Score = 42.4 bits (98), Expect = 7e-04
Identities = 96/347 (27%), Positives = 122/347 (35%), Gaps = 55/347 (15%)
Query: 63 PPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTPPR 122
PP RSS ++ R R P A P +R SPP P
Sbjct: 37 PPHTPATGTRSSYRLLPQKGRGNLRGAPTA-----PVSFSRIRRNPLRTQLSGSPPRRPT 91
Query: 123 SGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRG 182
S L A P+ L R + RAG GGR SP R G L +G A RG
Sbjct: 92 SVLRLASPA---GDLPRRPRPRAG-----GGRHSPRPAVGTIFRGGRKGRLREGRGAVRG 143
Query: 183 AGGARVTH-RPGRLRPRGRGRGRARRTCPARR----RGEEDLRV-QDSCP-QAGCRAMGQ 235
+G R RP R+R R G G R A R +G E L V Q P A R G
Sbjct: 144 SGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGG 203
Query: 236 RRVLKAEGARA---RARGGVCFGPRP------GMQKRSGGGSGGQRAGGW-QPGPSVRES 285
GAR RAR PRP G +R G + R G +P +VR S
Sbjct: 204 GSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNS 263
Query: 286 ------CIDMAGRERPSRGAGQRPQRV----RGSVGPWNLGS----------LGKKNKQE 325
++ RP+RG + +R RG G+ G++ ++
Sbjct: 264 SRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRGRQGEEN 323
Query: 326 TN--RRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPSPPQLRVSKLPP 370
+ R G+ P P PP PP+L LPP
Sbjct: 324 AHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPP---PPKLAPPPLPP 367
>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 46.2 bits (108), Expect = 5e-05
Identities = 71/239 (29%), Positives = 91/239 (38%), Gaps = 31/239 (12%)
Query: 37 VVHRGDAARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPA 96
+VH G A + L+ AR GP RP A A R++ +PH RR R L A P
Sbjct: 412 LVHAGQAGQ----PLQGQAR-GP-HRPAALAQEALRAAAARPHGRRHYRVRGLRGA-GPE 464
Query: 97 GPYHSARPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLS 156
G A P G R + + P G V PA T G + G
Sbjct: 465 GAGRLAGPWRGLRLQTLLLQ--DAPHGGAHEHVLVAVPA-------TGVGGLVGAG---Q 512
Query: 157 PPLRRAASGEWKRPGGLTQ-GEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRG 215
+ A + + P G+ GE GRGA G RV + P G ++ G
Sbjct: 513 GAVAAAGNAPERLPAGVQGCGEEVGRGARGDRVAGGHVEVVPVG------QQLAICMLHG 566
Query: 216 EEDLRVQDSCPQAGCRAMGQRRVLKAEGAR----ARARGGVCFGPRPGMQKRSGGGSGG 270
+ P A+G R L A AR AR RGG C+ RP + GGG GG
Sbjct: 567 QLGTAPHAHVPTVLGGALGGRAGLVAAPARRECPARRRGG-CWPRRPRRRHGGGGGGGG 624
Score = 36.6 bits (83), Expect = 0.039
Identities = 96/354 (27%), Positives = 127/354 (35%), Gaps = 35/354 (9%)
Query: 40 RGDAARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTR-RLPPALTPAGP 98
+G R A A AA P +GPA + ++ +RRRR R P L P
Sbjct: 112 QGTGTRPPAPAA-GAADAHSADETPEASGPAPGALVSRLRKRRRRRLRLGWQPGLLPHVD 170
Query: 99 YHSA----RPGGGARARAARVSPPTPPRS-GLDPAVPSPTPAPLARCRQTRAGLRLS-TG 152
G G A +P T ++ GL + P P RC++ R L+LS G
Sbjct: 171 GDVVETILEAGRGLSAHGRSTAPRTTDQAPGL-----TRGPRPALRCQRGRR-LQLSWGG 224
Query: 153 GRLSPPLR---RAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTC 209
GRL P R AA + G G G H G R G G G
Sbjct: 225 GRLVAPSRADTHAALAAFPERDIFHGGRVVALGVVGEGRGH-GGDRRGGGEGLGTVAAAA 283
Query: 210 PARRRGEEDLRVQDSCPQAGCR-AMGQRRVL-KAEGARARARGGVC--FGPRPGMQK-RS 264
P R ++ AG + + R +L +A+ AR R G F R G + R
Sbjct: 284 PLRVCADDLGAAVGVRGLAGLQEGLDSRHLLHEAQPLHARRRAGHAGSFWLRGGRDRLRR 343
Query: 265 GGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRG-AGQRPQRVRGSVGPWNLGSLGKKNK 323
GGG G P R G+ER RG Q+ +R R GP L K +
Sbjct: 344 GGGHTKSHLGVVTIVPGRRGRA--AGGQERGGRGRRRQQGRRGRRQAGP----GLAKVD- 396
Query: 324 QETNRRGSSLRAAW----SGRGRFRKVGTCPTPGPPDAPSPPQLRVSKLPPHSR 373
+ LR W +G+ G P P A + LR + PH R
Sbjct: 397 VDVLAGALGLRWQWVLVHAGQAGQPLQGQARGPHRPAALAQEALRAAAARPHGR 450
Score = 35.4 bits (80), Expect = 0.086
Identities = 63/228 (27%), Positives = 74/228 (32%), Gaps = 68/228 (29%)
Query: 53 AAARPGPLGRPPTRAGPAQRSSCTQPHRRR-RRGTRRLPP-ALTPAGPYHSARPGGGARA 110
A G G GP + + +RR R G RR+ A+ AG + GGG R
Sbjct: 822 AGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRV 881
Query: 111 RAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRP 170
R G AV P CRQ R L+P AA+
Sbjct: 882 RHGH---------GHGAAVLQRAP-----CRQQR---------HLAPAAAAAAA------ 912
Query: 171 GGLTQGEFAGRGAGGARVTHRPG-------RLRPRGRGRGRARRTCPARRRGEEDLRVQD 223
QG A +G HRPG R RP RGR RR A G R
Sbjct: 913 ----QGVRAAQGRA-----HRPGAQGAPSHRHRPGARGRRSRRRAAVALAGGAHPARA-- 961
Query: 224 SCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQ 271
A+G+RR GG G R Q R GG Q
Sbjct: 962 --------ALGRRR-----------GGGQAVGARAAHQARLAGGQVDQ 990
Score = 34.7 bits (78), Expect = 0.15
Identities = 88/357 (24%), Positives = 116/357 (32%), Gaps = 64/357 (17%)
Query: 56 RPGPLGRPPTRAGPAQRSSCTQPHRRRRR----GTRRLPPALTPAGPYHSARPGGGARAR 111
R G + P R PA+R P R RRR G P G H+ G
Sbjct: 587 RAGLVAAPARRECPARRRGGCWPRRPRRRHGGGGGGGGPGLQDLLGGGHAGGAHGHVVVA 646
Query: 112 AARVSPPTPP-RSGLDPAVPSPTP-----APLARCRQTRAGLRLSTGGRLSPP--LRRAA 163
A +P R+G V P AP+ L + G L RA
Sbjct: 647 PAAAAPTAREGRAGRHGHVAVVCPQVAAGAPVGADLDVSVVLWVGVVGHLGRGRGAGRAE 706
Query: 164 SGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEEDLRVQD 223
+ R GG QG F RG GG + HRP P RG+G P + + L
Sbjct: 707 AARAAREGGPHQGVFIQRGRGG--LGHRP---LPGWRGQG----VGPLAQPSVQVLGRVP 757
Query: 224 SCPQAGCRAMGQRRV----------LKAEGARARARGG-------------VCFGPRPGM 260
P G + Q V A R R R G V + +
Sbjct: 758 RDPAVGAATVAQGPVHGHVPVELTAAAAVSGRGRLRDGLGRVASVAAEGAQVAWAGAVLV 817
Query: 261 QKRSGGGSGGQRAGGWQPGPSVRESCID-------MAGRE-----------RPSRGAGQR 302
Q G +GG R GG G + + + AGR R GAG
Sbjct: 818 QGHEAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGG 877
Query: 303 PQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPS 359
+RVR G + ++ ++ R + AA + +G G PG APS
Sbjct: 878 GRRVRHGHG--HGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPS 932
Score = 33.5 bits (75), Expect = 0.33
Identities = 36/103 (34%), Positives = 38/103 (36%), Gaps = 16/103 (15%)
Query: 22 VQHGR-------QRPDEHAQRHVVHRGDAARVDA--AALRAAARPGPLGRPPTRAGPAQR 72
V+HG QR QRH+ AA AA A RPG G P R P R
Sbjct: 881 VRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRPGAR 940
Query: 73 SSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGG--ARARAA 113
R RRR L PA R GGG ARAA
Sbjct: 941 G-----RRSRRRAAVALAGGAHPARAALGRRRGGGQAVGARAA 978
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 46.2 bits (108), Expect = 5e-05
Identities = 70/234 (29%), Positives = 83/234 (35%), Gaps = 34/234 (14%)
Query: 5 LSGPHPDRVHEALHLG---GVQHGRQRPDEHAQRH-------VVHRGDAA---RVDAAAL 51
LSG P R L L G R RP RH + RG R AL
Sbjct: 82 LSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGAL 141
Query: 52 RAAARPGPLGRPPTRAGP------AQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSA-RP 104
R + + G P R A R P +G RL P P H+A R
Sbjct: 142 RGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLG-VHQPGLPTHAALRG 200
Query: 105 GGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAAS 164
GGG + P+PPR+ PS P P R+TR L + R + A
Sbjct: 201 GGGGSEGGGGGARPSPPRA---RQPPSGRPRP----RRTRL---LGSAERHTGRAALARH 250
Query: 165 GEWKRPGGLTQGEFAGRGAG-GARVTHRPGRLRPRG--RGRGRARRTCPARRRG 215
G+ RP + GRGA RP R RG R GRAR C R G
Sbjct: 251 GQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAG 304
Score = 45.8 bits (107), Expect = 6e-05
Identities = 75/278 (26%), Positives = 101/278 (36%), Gaps = 31/278 (11%)
Query: 88 RLPPALTPAGPYHSARPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGL 147
+L + P A+P A R S P+ G +PT AP++ R R L
Sbjct: 20 QLSHRILPQDGIKRAQPPPHTPATGTRSSYRLLPQKGRGNLRGAPT-APVSFSRIRRNPL 78
Query: 148 RLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRP-----------GRLR 196
R G SPP R + P G R AGG R + RP GRLR
Sbjct: 79 RTQLSG--SPPRRPTSVLRLASPAGDLPRRPRPR-AGGGRHSPRPAVGTIFRGGRKGRLR 135
Query: 197 PRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFGP 256
GRG R + R G RV+ G G + G + R GV
Sbjct: 136 ---EGRGALRGSGKRRGWGLRPQRVRSRLAGLGA-PRGGAAAPRGWGGQGAERLGV---H 188
Query: 257 RPGMQKRSG--GGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRGSVGPWN 314
+PG+ + GG GG GG PS + +GR RP R R+ GS +
Sbjct: 189 QPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRR------TRLLGS-AERH 241
Query: 315 LGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTP 352
G + +R +++R + GRG V P
Sbjct: 242 TGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARP 279
Score = 42.0 bits (97), Expect = 0.001
Identities = 96/347 (27%), Positives = 122/347 (35%), Gaps = 55/347 (15%)
Query: 63 PPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTPPR 122
PP RSS ++ R R P A P +R SPP P
Sbjct: 37 PPHTPATGTRSSYRLLPQKGRGNLRGAPTA-----PVSFSRIRRNPLRTQLSGSPPRRPT 91
Query: 123 SGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRG 182
S L A P+ L R + RAG GGR SP R G L +G A RG
Sbjct: 92 SVLRLASPA---GDLPRRPRPRAG-----GGRHSPRPAVGTIFRGGRKGRLREGRGALRG 143
Query: 183 AGGARVTH-RPGRLRPRGRGRGRARRTCPARR----RGEEDLRV-QDSCP-QAGCRAMGQ 235
+G R RP R+R R G G R A R +G E L V Q P A R G
Sbjct: 144 SGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGG 203
Query: 236 RRVLKAEGARA---RARGGVCFGPRP------GMQKRSGGGSGGQRAGGW-QPGPSVRES 285
GAR RAR PRP G +R G + R G +P +VR S
Sbjct: 204 GSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNS 263
Query: 286 ------CIDMAGRERPSRGAGQRPQRV----RGSVGPWNLGS----------LGKKNKQE 325
++ RP+RG + +R RG G+ G++ ++
Sbjct: 264 SRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRGRQGEEN 323
Query: 326 TN--RRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPSPPQLRVSKLPP 370
+ R G+ P P PP PP+L LPP
Sbjct: 324 AHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPP---PPKLAPPPLPP 367
>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1297
Score = 46.2 bits (108), Expect = 5e-05
Identities = 71/239 (29%), Positives = 91/239 (38%), Gaps = 31/239 (12%)
Query: 37 VVHRGDAARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPA 96
+VH G A + L+ AR GP RP A A R++ +PH RR R L A P
Sbjct: 412 LVHAGQAGQ----PLQGQAR-GP-HRPAALAQEALRAAAARPHGRRHYRVRGLRGA-GPE 464
Query: 97 GPYHSARPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLS 156
G A P G R + + P G V PA T G + G
Sbjct: 465 GAGRLAGPWRGLRLQTLLLQ--DAPHGGAHEHVLVAVPA-------TGVGGLVGAG---Q 512
Query: 157 PPLRRAASGEWKRPGGLTQ-GEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRG 215
+ A + + P G+ GE GRGA G RV + P G ++ G
Sbjct: 513 GAVAAAGNAPERLPAGVQGCGEEVGRGARGDRVAGGHVEVVPVG------QQLAICMLHG 566
Query: 216 EEDLRVQDSCPQAGCRAMGQRRVLKAEGAR----ARARGGVCFGPRPGMQKRSGGGSGG 270
+ P A+G R L A AR AR RGG C+ RP + GGG GG
Sbjct: 567 QLGTAPHAHVPTVLGGALGGRAGLVAAPARRECPARRRGG-CWPRRPRRRHGGGGGGGG 624
Score = 36.6 bits (83), Expect = 0.039
Identities = 96/354 (27%), Positives = 127/354 (35%), Gaps = 35/354 (9%)
Query: 40 RGDAARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTR-RLPPALTPAGP 98
+G R A A AA P +GPA + ++ +RRRR R P L P
Sbjct: 112 QGTGTRPPAPAA-GAADAHSADETPEASGPAPGALVSRLRKRRRRRLRLGWQPGLLPHVD 170
Query: 99 YHSA----RPGGGARARAARVSPPTPPRS-GLDPAVPSPTPAPLARCRQTRAGLRLS-TG 152
G G A +P T ++ GL + P P RC++ R L+LS G
Sbjct: 171 GDVVETILEAGRGLSAHGRSTAPRTTDQAPGL-----TRGPRPALRCQRGRR-LQLSWGG 224
Query: 153 GRLSPPLR---RAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTC 209
GRL P R AA + G G G H G R G G G
Sbjct: 225 GRLVAPSRADTHAALAAFPERDIFHGGRVVALGVVGEGRGH-GGDRRGGGEGLGTVAAAA 283
Query: 210 PARRRGEEDLRVQDSCPQAGCR-AMGQRRVL-KAEGARARARGGVC--FGPRPGMQK-RS 264
P R ++ AG + + R +L +A+ AR R G F R G + R
Sbjct: 284 PLRVCADDLGAAVGVRGLAGLQEGLDSRHLLHEAQPLHARRRAGHAGSFWLRGGRDRLRR 343
Query: 265 GGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRG-AGQRPQRVRGSVGPWNLGSLGKKNK 323
GGG G P R G+ER RG Q+ +R R GP L K +
Sbjct: 344 GGGHTKSHLGVVTIVPGRRGRA--AGGQERGGRGRRRQQGRRGRRQAGP----GLAKVD- 396
Query: 324 QETNRRGSSLRAAW----SGRGRFRKVGTCPTPGPPDAPSPPQLRVSKLPPHSR 373
+ LR W +G+ G P P A + LR + PH R
Sbjct: 397 VDVLAGALGLRWQWVLVHAGQAGQPLQGQARGPHRPAALAQEALRAAAARPHGR 450
Score = 35.4 bits (80), Expect = 0.086
Identities = 63/228 (27%), Positives = 74/228 (32%), Gaps = 68/228 (29%)
Query: 53 AAARPGPLGRPPTRAGPAQRSSCTQPHRRR-RRGTRRLPP-ALTPAGPYHSARPGGGARA 110
A G G GP + + +RR R G RR+ A+ AG + GGG R
Sbjct: 822 AGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGGGRRV 881
Query: 111 RAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRP 170
R G AV P CRQ R L+P AA+
Sbjct: 882 RHGH---------GHGAAVLQRAP-----CRQQR---------HLAPAAAAAAA------ 912
Query: 171 GGLTQGEFAGRGAGGARVTHRPG-------RLRPRGRGRGRARRTCPARRRGEEDLRVQD 223
QG A +G HRPG R RP RGR RR A G R
Sbjct: 913 ----QGVRAAQGRA-----HRPGAQGAPSHRHRPGARGRRSRRRAAVALAGGAHPARA-- 961
Query: 224 SCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQ 271
A+G+RR GG G R Q R GG Q
Sbjct: 962 --------ALGRRR-----------GGGQAVGARAAHQARLAGGQVDQ 990
Score = 34.7 bits (78), Expect = 0.15
Identities = 88/357 (24%), Positives = 116/357 (32%), Gaps = 64/357 (17%)
Query: 56 RPGPLGRPPTRAGPAQRSSCTQPHRRRRR----GTRRLPPALTPAGPYHSARPGGGARAR 111
R G + P R PA+R P R RRR G P G H+ G
Sbjct: 587 RAGLVAAPARRECPARRRGGCWPRRPRRRHGGGGGGGGPGLQDLLGGGHAGGAHGHVVVA 646
Query: 112 AARVSPPTPP-RSGLDPAVPSPTP-----APLARCRQTRAGLRLSTGGRLSPP--LRRAA 163
A +P R+G V P AP+ L + G L RA
Sbjct: 647 PAAAAPTAREGRAGRHGHVAVVCPQVAAGAPVGADLDVSVVLWVGVVGHLGRGRGAGRAE 706
Query: 164 SGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEEDLRVQD 223
+ R GG QG F RG GG + HRP P RG+G P + + L
Sbjct: 707 AARAAREGGPHQGVFIQRGRGG--LGHRP---LPGWRGQG----VGPLAQPSVQVLGRVP 757
Query: 224 SCPQAGCRAMGQRRV----------LKAEGARARARGG-------------VCFGPRPGM 260
P G + Q V A R R R G V + +
Sbjct: 758 RDPAVGAATVAQGPVHGHVPVELTAAAAVSGRGRLRDGLGRVASVAAEGAQVAWAGAVLV 817
Query: 261 QKRSGGGSGGQRAGGWQPGPSVRESCID-------MAGRE-----------RPSRGAGQR 302
Q G +GG R GG G + + + AGR R GAG
Sbjct: 818 QGHEAGVAGGARGGGAAAGGPLAGAVVQRMRQRRVRAGRRRVGARAVAAAGRQGAGAGGG 877
Query: 303 PQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPS 359
+RVR G + ++ ++ R + AA + +G G PG APS
Sbjct: 878 GRRVRHGHG--HGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPS 932
Score = 33.5 bits (75), Expect = 0.33
Identities = 36/103 (34%), Positives = 38/103 (36%), Gaps = 16/103 (15%)
Query: 22 VQHGR-------QRPDEHAQRHVVHRGDAARVDA--AALRAAARPGPLGRPPTRAGPAQR 72
V+HG QR QRH+ AA AA A RPG G P R P R
Sbjct: 881 VRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQGVRAAQGRAHRPGAQGAPSHRHRPGAR 940
Query: 73 SSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGG--ARARAA 113
R RRR L PA R GGG ARAA
Sbjct: 941 G-----RRSRRRAAVALAGGAHPARAALGRRRGGGQAVGARAA 978
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 46.2 bits (108), Expect = 5e-05
Identities = 70/234 (29%), Positives = 83/234 (35%), Gaps = 34/234 (14%)
Query: 5 LSGPHPDRVHEALHLG---GVQHGRQRPDEHAQRH-------VVHRGDAA---RVDAAAL 51
LSG P R L L G R RP RH + RG R AL
Sbjct: 82 LSGSPPRRPTSVLRLASPAGDLPRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGAL 141
Query: 52 RAAARPGPLGRPPTRAGP------AQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSA-RP 104
R + + G P R A R P +G RL P P H+A R
Sbjct: 142 RGSGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLG-VHQPGLPTHAALRG 200
Query: 105 GGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAAS 164
GGG + P+PPR+ PS P P R+TR L + R + A
Sbjct: 201 GGGGSEGGGGGARPSPPRA---RQPPSGRPRP----RRTRL---LGSAERHTGRAALARH 250
Query: 165 GEWKRPGGLTQGEFAGRGAG-GARVTHRPGRLRPRG--RGRGRARRTCPARRRG 215
G+ RP + GRGA RP R RG R GRAR C R G
Sbjct: 251 GQLSRPHAAVRNSSRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAG 304
Score = 45.8 bits (107), Expect = 6e-05
Identities = 75/278 (26%), Positives = 101/278 (36%), Gaps = 31/278 (11%)
Query: 88 RLPPALTPAGPYHSARPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGL 147
+L + P A+P A R S P+ G +PT AP++ R R L
Sbjct: 20 QLSHRILPQDGIKRAQPPPHTPATGTRSSYRLLPQKGRGNLRGAPT-APVSFSRIRRNPL 78
Query: 148 RLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRP-----------GRLR 196
R G SPP R + P G R AGG R + RP GRLR
Sbjct: 79 RTQLSG--SPPRRPTSVLRLASPAGDLPRRPRPR-AGGGRHSPRPAVGTIFRGGRKGRLR 135
Query: 197 PRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFGP 256
GRG R + R G RV+ G G + G + R GV
Sbjct: 136 ---EGRGALRGSGKRRGWGLRPQRVRSRLAGLGA-PRGGAAAPRGWGGQGAERLGV---H 188
Query: 257 RPGMQKRSG--GGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRGSVGPWN 314
+PG+ + GG GG GG PS + +GR RP R R+ GS +
Sbjct: 189 QPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPPSGRPRPRR------TRLLGS-AERH 241
Query: 315 LGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTP 352
G + +R +++R + GRG V P
Sbjct: 242 TGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARP 279
Score = 42.0 bits (97), Expect = 0.001
Identities = 96/347 (27%), Positives = 122/347 (35%), Gaps = 55/347 (15%)
Query: 63 PPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTPPR 122
PP RSS ++ R R P A P +R SPP P
Sbjct: 37 PPHTPATGTRSSYRLLPQKGRGNLRGAPTA-----PVSFSRIRRNPLRTQLSGSPPRRPT 91
Query: 123 SGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRG 182
S L A P+ L R + RAG GGR SP R G L +G A RG
Sbjct: 92 SVLRLASPA---GDLPRRPRPRAG-----GGRHSPRPAVGTIFRGGRKGRLREGRGALRG 143
Query: 183 AGGARVTH-RPGRLRPRGRGRGRARRTCPARR----RGEEDLRV-QDSCP-QAGCRAMGQ 235
+G R RP R+R R G G R A R +G E L V Q P A R G
Sbjct: 144 SGKRRGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGG 203
Query: 236 RRVLKAEGARA---RARGGVCFGPRP------GMQKRSGGGSGGQRAGGW-QPGPSVRES 285
GAR RAR PRP G +R G + R G +P +VR S
Sbjct: 204 GSEGGGGGARPSPPRARQPPSGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNS 263
Query: 286 ------CIDMAGRERPSRGAGQRPQRV----RGSVGPWNLGS----------LGKKNKQE 325
++ RP+RG + +R RG G+ G++ ++
Sbjct: 264 SRGRGAATSVSAAARPTRGGARGHRRADGRARGGCAQLRAGTPSAPGGLQDCRGRQGEEN 323
Query: 326 TN--RRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPSPPQLRVSKLPP 370
+ R G+ P P PP PP+L LPP
Sbjct: 324 AHPFRSGAPFSPHPHASRSTLAAQLLPLPQPPP---PPKLAPPPLPP 367
>gi|42821110 hypothetical protein LOC340602 [Homo sapiens]
Length = 503
Score = 46.2 bits (108), Expect = 5e-05
Identities = 73/262 (27%), Positives = 96/262 (36%), Gaps = 44/262 (16%)
Query: 70 AQRSSCTQPHRRRRRGTRRLPPALTPAG------PYHSARPGGGARARAARVSPPTPPRS 123
AQ S RR++ + PA P G P + PG P + P S
Sbjct: 137 AQTKSPGNSRRRKQPCRNQAAPAQKPPGRRLFPEPLPPSSPG---------FRPSSYPCS 187
Query: 124 GLDPA--VPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGR 181
G + P PA L+ + R R S ++ LRR ASG PG + +G A
Sbjct: 188 GASTSSQATQPGPALLSHASEARPATR-SRITLVASALRRRASG----PGPVIRGCTAQP 242
Query: 182 G-AGGARVTHR-PGRLRPRGRG----RGRARRTCPARRRGEED----LRVQDSCPQAGCR 231
G A R TH P RL P RGRA PARR + R +DS P + R
Sbjct: 243 GPAFPHRATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARRGRDSAPVSAPR 302
Query: 232 AMGQRRVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQPGPSVRESCID--- 288
+ A AR G P P ++ R+ G R+ PG +R
Sbjct: 303 GR--------DSAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRS 354
Query: 289 -MAGRERPSRGAGQRPQRVRGS 309
+ R S A + P GS
Sbjct: 355 ALLSRRSLSGSADENPSCGTGS 376
Score = 32.3 bits (72), Expect = 0.73
Identities = 32/106 (30%), Positives = 40/106 (37%), Gaps = 8/106 (7%)
Query: 43 AARVDAAALRAAARPGPLGRPPTRA-GPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHS 101
A +D A L + PGP R GPA+R + P RR R P P G
Sbjct: 250 ATHLDPARLSPESAPGPARRGRASVPGPARRGCDSAPGPARR--GRDSAPVSAPRG--RD 305
Query: 102 ARPGGGARARAARVSPPTPPRSGLDPA---VPSPTPAPLARCRQTR 144
+ PG R R + P R+ A S TP R R T+
Sbjct: 306 SAPGSARRGRDSAPGPALRVRTARSDAGHRSTSTTPGTGLRSRSTQ 351
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 45.8 bits (107), Expect = 6e-05
Identities = 90/348 (25%), Positives = 118/348 (33%), Gaps = 53/348 (15%)
Query: 57 PGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGG--------GA 108
PGP G P R ++ P R G P A P+GP +A G G
Sbjct: 1754 PGPQGDPGVRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGRDGLPGL 1813
Query: 109 RARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWK 168
R P PP GL P P P + G GR ASG
Sbjct: 1814 RGEQGLPGPSGPP--GL-PGKPGEDGKPGLNGKNGEPG-DPGEDGRKGEKGDSGASGREG 1869
Query: 169 RPGGLTQGEFAGRGAGGAR-VTHRPGRLRPRGRG-RGRARRTCPARRRGEEDLRVQDSCP 226
R G +GE G G + PG + P G+G G T P RGE + + P
Sbjct: 1870 RDG--PKGERGAPGILGPQGPPGLPGPVGPPGQGFPGVPGGTGPKGDRGETGSKGEQGLP 1927
Query: 227 -QAGCR-----AMGQRRVLKAEGARARA---------RGGVCFGPRPGMQKRSGGGSGGQ 271
+ G R R+L+ G +A A F P P ++ G SG Q
Sbjct: 1928 GERGLRGEPGSVPNVDRLLETAGIKASALREIVETWDESSGSFLPVPERRRGPKGDSGEQ 1987
Query: 272 RAGGWQPGP-------SVRESCIDMAGRERPSRGAGQR----PQRVRGSVG-------PW 313
G + GP ++ D + P G+R P + G G P
Sbjct: 1988 GPPG-KEGPIGFPGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPG 2046
Query: 314 NLGSLGKKNKQ-ETNRRGSSLRAAWSGRGRFRKVGTCPTPGPPDAPSP 360
G +G+ + E RG + +GR G TPGPP P P
Sbjct: 2047 RAGGVGEAGRPGERGERGE--KGERGEQGRDGPPGLPGTPGPPGPPGP 2092
Score = 35.4 bits (80), Expect = 0.086
Identities = 78/281 (27%), Positives = 90/281 (32%), Gaps = 69/281 (24%)
Query: 58 GPLGRP---PTRA----GPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARA 110
GP GR PT A GP S P +G+ LP + G + G +
Sbjct: 2213 GPPGRGLTGPTGAVGLPGPPGPSGLVGP-----QGSPGLPGQVGETGKPGAPGRDGASGK 2267
Query: 111 RAARVSPPTPPRSGLD-PAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKR 169
R SP P GL P P P P Q GL A GE
Sbjct: 2268 DGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLP-------------GAKGEKGA 2314
Query: 170 PGGLTQGEFAGR-GAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEEDLRVQDSCPQA 228
PGGL G+ G GA G R G PRG +G A R GE+
Sbjct: 2315 PGGLA-GDLVGEPGAKGDR-----GLPGPRGE-KGEAGRAGEPGDPGED----------- 2356
Query: 229 GCRAMGQRRVLKAEGARARARGGVCFGPRP----------GMQKRSGG-------GSGGQ 271
GQ+ +G + GV P P G+ G G G
Sbjct: 2357 -----GQKGAPGPKGFKGDPGVGVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGP 2411
Query: 272 RAGGWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRGSVGP 312
R QPGPS GRE G P GSVGP
Sbjct: 2412 RGEMGQPGPSGERGLAGPPGREGIPGPLG--PPGPPGSVGP 2450
Score = 28.9 bits (63), Expect = 8.1
Identities = 79/341 (23%), Positives = 100/341 (29%), Gaps = 56/341 (16%)
Query: 57 PGPLGRPPTRA---------GPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSARPGG- 106
PGP G P R P Q P R+G P GP P G
Sbjct: 1331 PGPRGDPGERGPRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGPRGP 1390
Query: 107 ---------GARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSP 157
G + PP P G+ P P P + Q G + P
Sbjct: 1391 PGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQ----------GPVGP 1440
Query: 158 PLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEE 217
P ++ G+ + G+ G G R PG + P+G RG A +GE
Sbjct: 1441 PGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGP--PGAIGPKG-DRGFPGPLGEAGEKGER 1497
Query: 218 DLRVQDSCPQAGCRAMGQRRVLKAEGARA-------RARGGVCFGP-RPGMQKRSGGGSG 269
P + G V GA+ R G P RPG G
Sbjct: 1498 G-------PPGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVA 1550
Query: 270 GQRAGGWQPGPSVRESCIDMAGRERPSR---GAGQRPQRVRGSVGPWNL-GSLGKKNKQ- 324
G + GP+ + G P P+ G GP L G G
Sbjct: 1551 GPKGEKGDVGPAGPRGATGVQGERGPPGLVLPGDPGPKGDPGDRGPIGLTGRAGPPGDSG 1610
Query: 325 ETNRRGSSLRAAWSG----RGRFRKVGTCPTPGPPDAPSPP 361
+G R G RGR +VG GPP P P
Sbjct: 1611 PPGEKGDPGRPGPPGPVGPRGRDGEVGEKGDEGPPGDPGLP 1651
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 45.8 bits (107), Expect = 6e-05
Identities = 64/263 (24%), Positives = 92/263 (34%), Gaps = 27/263 (10%)
Query: 118 PTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGE 177
P R P VP+ PAP + + L+T + AS + +R +G
Sbjct: 572 PAESRDPEVPTVPAEAPAP--------SPVPLTTPASAEEAIPLPASSDSERSASSVEGP 623
Query: 178 FAGRGAGGARVTHRPGR-LRPRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQR 236
GA ARV R R R RG G + P RR+ + G+
Sbjct: 624 ---GGALYARVARREARPARARGEIGGLSLSPSPERRKPPPP---DPATKPKVSWIHGKH 677
Query: 237 RVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQP---GPSVRESCIDMAGRE 293
A A + G P P +KR+ P P+ R + E
Sbjct: 678 SAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLP----E 733
Query: 294 RPSRGAGQRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTP- 352
+ A P R R P LG+ G++ +S+ AA RG+ R +G
Sbjct: 734 EATALAAPSPPRARARAAPRPLGAHGRRRSPAKRAEAASMLAA-DVRGKTRSLGRAEVAL 792
Query: 353 ---GPPDAPSPPQLRVSKLPPHS 372
GP + P+PPQ +PP S
Sbjct: 793 GAQGPREKPAPPQKAKRSVPPAS 815
Score = 37.4 bits (85), Expect = 0.023
Identities = 64/236 (27%), Positives = 86/236 (36%), Gaps = 28/236 (11%)
Query: 87 RRLPPALTPAG-PYHSARPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRA 145
RR PP PA P S G + A A R P PP S A PSP ++ ++T +
Sbjct: 656 RRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGS---EAAPSP-----SKRKRTPS 707
Query: 146 GLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRA 205
T SP R RP GL + A R R PR G
Sbjct: 708 DKSAHTVEHGSPRTRDPT----PRPPGLPEEATALAAPSPPRAR---ARAAPRPLG-AHG 759
Query: 206 RRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRV-LKAEGARARARGGVCFGPRPGMQKRS 264
RR PA+R + D + R++G+ V L A+G R + P KRS
Sbjct: 760 RRRSPAKRAEAASMLAAD--VRGKTRSLGRAEVALGAQGPREKP-------APPQKAKRS 810
Query: 265 GGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAG-QRPQRVRGSVGPWNLGSLG 319
+ RA P ++ D+ E P + Q+P R + LG G
Sbjct: 811 VPPASPARAPPATETPGPEKAATDLPAPETPRKKTPIQKPPRKKSREAAGELGRAG 866
Score = 37.0 bits (84), Expect = 0.030
Identities = 46/161 (28%), Positives = 58/161 (36%), Gaps = 13/161 (8%)
Query: 22 VQHGRQRPDEHAQRHVVHRGDAARVDAAA---LRAAARPGPLGRPPTRAGPAQR----SS 74
V+HG R + R +A + A + RA A P PLG R PA+R S
Sbjct: 714 VEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARAAPRPLGAHGRRRSPAKRAEAASM 773
Query: 75 CTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTPPRSGLDPAVPSPTP 134
R + R R AL GP P A+ SP P PA +P P
Sbjct: 774 LAADVRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPARAP-----PATETPGP 828
Query: 135 APLARCRQTRAGLRLSTGGRLSPPLR-RAASGEWKRPGGLT 174
A R T + P + R A+GE R G T
Sbjct: 829 EKAATDLPAPETPRKKTPIQKPPRKKSREAAGELGRAGAPT 869
Score = 32.3 bits (72), Expect = 0.73
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 302 RPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAW-SGRGRFRKVGTCPTPGPPDAPSP 360
RP R RG +G +L ++ K + + +W G+ G P+P PP + +
Sbjct: 637 RPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAA 696
Query: 361 PQLRVSKLPPHSR 373
P K P +
Sbjct: 697 PSPSKRKRTPSDK 709
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 45.8 bits (107), Expect = 6e-05
Identities = 64/263 (24%), Positives = 92/263 (34%), Gaps = 27/263 (10%)
Query: 118 PTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGGRLSPPLRRAASGEWKRPGGLTQGE 177
P R P VP+ PAP + + L+T + AS + +R +G
Sbjct: 567 PAESRDPEVPTVPAEAPAP--------SPVPLTTPASAEEAIPLPASSDSERSASSVEGP 618
Query: 178 FAGRGAGGARVTHRPGR-LRPRGRGRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQR 236
GA ARV R R R RG G + P RR+ + G+
Sbjct: 619 ---GGALYARVARREARPARARGEIGGLSLSPSPERRKPPPP---DPATKPKVSWIHGKH 672
Query: 237 RVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGWQP---GPSVRESCIDMAGRE 293
A A + G P P +KR+ P P+ R + E
Sbjct: 673 SAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLP----E 728
Query: 294 RPSRGAGQRPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAWSGRGRFRKVGTCPTP- 352
+ A P R R P LG+ G++ +S+ AA RG+ R +G
Sbjct: 729 EATALAAPSPPRARARAAPRPLGAHGRRRSPAKRAEAASMLAA-DVRGKTRSLGRAEVAL 787
Query: 353 ---GPPDAPSPPQLRVSKLPPHS 372
GP + P+PPQ +PP S
Sbjct: 788 GAQGPREKPAPPQKAKRSVPPAS 810
Score = 37.4 bits (85), Expect = 0.023
Identities = 64/236 (27%), Positives = 86/236 (36%), Gaps = 28/236 (11%)
Query: 87 RRLPPALTPAG-PYHSARPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRA 145
RR PP PA P S G + A A R P PP S A PSP ++ ++T +
Sbjct: 651 RRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGS---EAAPSP-----SKRKRTPS 702
Query: 146 GLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRA 205
T SP R RP GL + A R R PR G
Sbjct: 703 DKSAHTVEHGSPRTRDPT----PRPPGLPEEATALAAPSPPRAR---ARAAPRPLG-AHG 754
Query: 206 RRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRV-LKAEGARARARGGVCFGPRPGMQKRS 264
RR PA+R + D + R++G+ V L A+G R + P KRS
Sbjct: 755 RRRSPAKRAEAASMLAAD--VRGKTRSLGRAEVALGAQGPREKP-------APPQKAKRS 805
Query: 265 GGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAG-QRPQRVRGSVGPWNLGSLG 319
+ RA P ++ D+ E P + Q+P R + LG G
Sbjct: 806 VPPASPARAPPATETPGPEKAATDLPAPETPRKKTPIQKPPRKKSREAAGELGRAG 861
Score = 37.0 bits (84), Expect = 0.030
Identities = 46/161 (28%), Positives = 58/161 (36%), Gaps = 13/161 (8%)
Query: 22 VQHGRQRPDEHAQRHVVHRGDAARVDAAA---LRAAARPGPLGRPPTRAGPAQR----SS 74
V+HG R + R +A + A + RA A P PLG R PA+R S
Sbjct: 709 VEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARARAAPRPLGAHGRRRSPAKRAEAASM 768
Query: 75 CTQPHRRRRRGTRRLPPALTPAGPYHSARPGGGARARAARVSPPTPPRSGLDPAVPSPTP 134
R + R R AL GP P A+ SP P PA +P P
Sbjct: 769 LAADVRGKTRSLGRAEVALGAQGPREKPAPPQKAKRSVPPASPARAP-----PATETPGP 823
Query: 135 APLARCRQTRAGLRLSTGGRLSPPLR-RAASGEWKRPGGLT 174
A R T + P + R A+GE R G T
Sbjct: 824 EKAATDLPAPETPRKKTPIQKPPRKKSREAAGELGRAGAPT 864
Score = 32.3 bits (72), Expect = 0.73
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 302 RPQRVRGSVGPWNLGSLGKKNKQETNRRGSSLRAAW-SGRGRFRKVGTCPTPGPPDAPSP 360
RP R RG +G +L ++ K + + +W G+ G P+P PP + +
Sbjct: 632 RPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAGRAPSPPPPGSEAA 691
Query: 361 PQLRVSKLPPHSR 373
P K P +
Sbjct: 692 PSPSKRKRTPSDK 704
>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
Length = 426
Score = 45.4 bits (106), Expect = 8e-05
Identities = 75/281 (26%), Positives = 94/281 (33%), Gaps = 41/281 (14%)
Query: 41 GDAARVDAAALRAAARPGPLGR-PPTRAGPAQRSSCTQPHRRRRRGTRRLP--------P 91
G A A PGP R P+ AG ++ R+R R LP P
Sbjct: 98 GPAPGAPRARGSCGREPGPRRRRAPSSAGKRPAAAARAAPPRQRSLARCLPRSVGSCVRP 157
Query: 92 ALTPAGPYHSARPGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLST 151
++ P+ P R R + P P + L A P APLA R
Sbjct: 158 SVGPSLPRRHCRRHCRCHCRRRPLPKPPPLQPRLGSASPPRLAAPLAGSR---------- 207
Query: 152 GGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPA 211
LSP RR + P AG G R R G + R RG R
Sbjct: 208 APSLSPFPRRCRRRAERSP--------AGHGLPLPRSLSRGGEVVGARRRRGGEERRVRG 259
Query: 212 RRRGEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGMQKRSGGGSGGQ 271
RR+G + AG A G+ G R AR G PG+ R G G
Sbjct: 260 RRQG---CALGSPPIPAGPAAPGR------AGERRAARQWRKRGGGPGVSPREGAQGEGV 310
Query: 272 RAGGWQPGPSVRESCIDMAGRERPSRGAGQRPQRVRGSVGP 312
R GG P +C+ R P+ G P R + GP
Sbjct: 311 R-GGVTPRARGSSTCL----RPSPATWQGGAPYRAIFAAGP 346
>gi|239741968 PREDICTED: hypothetical protein [Homo sapiens]
Length = 263
Score = 45.4 bits (106), Expect = 8e-05
Identities = 57/183 (31%), Positives = 70/183 (38%), Gaps = 21/183 (11%)
Query: 111 RAARVSPPTPPRS------------GLDPAVPSPTPAPLARCRQTRAGLRLSTGGR-LSP 157
R+ + PTPPRS L P SP AP+ + TG SP
Sbjct: 67 RSPLLYQPTPPRSVCVRKGARKTVEALRPREGSPA-APIGDEEWVLRRIWRRTGAAGASP 125
Query: 158 PLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRRGEE 217
R+ G R G + A RG GG RV +R RG G AR AR
Sbjct: 126 AGARSHPGRASRRGASDRARCA-RGLGGPRVAAASELVR-RGLASGAAR----ARPASPA 179
Query: 218 DLRVQDSCPQAGCRAMGQRRV-LKAEGARARARGGVCFGPRPGMQKRSGGGSGGQRAGGW 276
R+ A A RR +AE + +R R C P PG G GG+RAGG
Sbjct: 180 PARLLPLAVGASAAAGDTRRTEARAEPSPSRRRRRRCCAPLPGSLPARRPGCGGRRAGGA 239
Query: 277 QPG 279
+ G
Sbjct: 240 RAG 242
Score = 32.0 bits (71), Expect = 0.95
Identities = 25/67 (37%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 44 ARVDAAALRAAARPGPLGRPPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTPAGPYHSAR 103
AR+ A+ A+A G R RA P+ RRRRR LP +L P R
Sbjct: 181 ARLLPLAVGASAAAGDTRRTEARAEPSPS------RRRRRRCCAPLPGSLPARRPGCGGR 234
Query: 104 PGGGARA 110
GGARA
Sbjct: 235 RAGGARA 241
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 45.1 bits (105), Expect = 1e-04
Identities = 59/200 (29%), Positives = 68/200 (34%), Gaps = 20/200 (10%)
Query: 42 DAARVDAAALRAAARPGPLGR------PPTRAGPAQRSSCTQPHRRRRRGTRRLPPALTP 95
D R + A R A P P + PP G R P R R P L P
Sbjct: 78 DQEREPSLAARGTAPPAPPRQCLPTPCPPLGHGLRPRPPPGTPPPRCPRTLAPGPRGLFP 137
Query: 96 AGPYHSAR--PGGGARARAARVSPPTPPRSGLDPAVPSPTPAPLARCRQTRAGLRLSTGG 153
A P AR P G A A R P R P+ P P LA+ R R G
Sbjct: 138 APPPAPARTGPAGKAAADRGRPGPAAGRRVRRSPSFP---PFLLAQTRLGRTG------- 187
Query: 154 RLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARR 213
L+ L G + GG + GR AR G R GR RR P R
Sbjct: 188 PLALCLLLLLHGAMRLGGGSREKLACGRAGRAARTGRGEGGRRAEEEAAGRRRRRRPGRT 247
Query: 214 RGEEDLRVQDSCPQAGCRAM 233
RG R +AG R +
Sbjct: 248 RGIP--RAAGGLSRAGTRVL 265
Score = 32.3 bits (72), Expect = 0.73
Identities = 61/220 (27%), Positives = 75/220 (34%), Gaps = 58/220 (26%)
Query: 101 SARPGGGAR-------ARAAR-VSPPTPPRS-----------GLDPAVPSPTPAPLARCR 141
S PGG A + AAR +PP PPR GL P P TP P RC
Sbjct: 68 SLLPGGSADKDQEREPSLAARGTAPPAPPRQCLPTPCPPLGHGLRPRPPPGTPPP--RCP 125
Query: 142 QTRA-GLRLSTGGRLSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGR 200
+T A G R G +PP A +G P G + G R R P
Sbjct: 126 RTLAPGPR---GLFPAPPPAPARTG----PAGKAAADRGRPGPAAGRRVRRSPSFPPFLL 178
Query: 201 GRGRARRTCPARRRGEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGM 260
+ R RT P A C + ++ G +R + G R G
Sbjct: 179 AQTRLGRTGPL----------------ALCLLLLLHGAMRLGGG---SREKLACG-RAGR 218
Query: 261 QKRSGGGSGGQRAGGWQPGPSVRESCIDMAGRERPSRGAG 300
R+G G GG+RA E R RP R G
Sbjct: 219 AARTGRGEGGRRA---------EEEAAGRRRRRRPGRTRG 249
Score = 30.0 bits (66), Expect = 3.6
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Query: 233 MGQRRVLKAEGARARARGGV------CFGPRPGMQ--KRSGGGSGGQRAGGWQP 278
MG +R L+ EG R R G G++ +R+G G+ G+R GGW P
Sbjct: 1 MGGQRRLRKEGPRVGVRKREEEEEKSSLGRAAGVESRRRAGEGAAGRRDGGWGP 54
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,723,377
Number of Sequences: 37866
Number of extensions: 1463543
Number of successful extensions: 16271
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 1333
Number of HSP's that attempted gapping in prelim test: 11921
Number of HSP's gapped (non-prelim): 5071
length of query: 382
length of database: 18,247,518
effective HSP length: 104
effective length of query: 278
effective length of database: 14,309,454
effective search space: 3978028212
effective search space used: 3978028212
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.